Carg13137 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg13137
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	VQ motif-containing protein 22-like
Location	Cucurbita_argyrosperma_scaffold_101 : 545965 .. 546624 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCCAGCCCCGGCGATTGGCTTCAATTTTACCATCAAAATCTTTCTACCACGGCGGCGCCACCACCACCTTCCGATTTACCCACCTCCTCTGCAATGATCTTTGCAGAACGAGTTTCTGACGCCACCGCCGTCCCCACTACTTCCGCTGCTATCATCGGAAGTTCGGCTGGAAACACCGGCTTGAATCCGGAAGGTCGTGTCGGAAAGCCGATTCGTCGCCGGTCCAGAGCGTCACGGCGGACTCCGACGACGTTGCTCAACACGGATACGACGAATTTCAGAGCGATGGTTCAGCAATTCACTGGAGGTCCGACTTCTTCTTTCGCCTCATCGATTTCCCCCAATTTTCCGCTAGGGTTCCGCGGGATTTGTCAATCGAATTTCGGTACTCCACCGTACGCCGTGATTTCTCCACCGTCTGATTATCTACAACCGCCGCAGTTTTATCATTCCAACCCCCAGCCGTTCATGTTTCCGGCCGCTGCACATGGCGGAGACTTTACGCAGAGGATTTCCGTTGCGAGGCCGGCTAATGACGGAGTCGCCGGAGATGGATTTCTGATGGAAAGTGCGGTTTCTTCTCAAATTCCTACCACCGGAGCTTCTGCAGATTCCTCCAACAAGACCAATCACGGTAATGGTGGCTCACTGTTCTAA

mRNA sequence

ATGTCCAGCCCCGGCGATTGGCTTCAATTTTACCATCAAAATCTTTCTACCACGGCGGCGCCACCACCACCTTCCGATTTACCCACCTCCTCTGCAATGATCTTTGCAGAACGAGTTTCTGACGCCACCGCCGTCCCCACTACTTCCGCTGCTATCATCGGAAGTTCGGCTGGAAACACCGGCTTGAATCCGGAAGGTCGTGTCGGAAAGCCGATTCGTCGCCGGTCCAGAGCGTCACGGCGGACTCCGACGACGTTGCTCAACACGGATACGACGAATTTCAGAGCGATGGTTCAGCAATTCACTGGAGGTCCGACTTCTTCTTTCGCCTCATCGATTTCCCCCAATTTTCCGCTAGGGTTCCGCGGGATTTGTCAATCGAATTTCGGTACTCCACCGTACGCCGTGATTTCTCCACCGTCTGATTATCTACAACCGCCGCAGTTTTATCATTCCAACCCCCAGCCGTTCATGTTTCCGGCCGCTGCACATGGCGGAGACTTTACGCAGAGGATTTCCGTTGCGAGGCCGGCTAATGACGGAGTCGCCGGAGATGGATTTCTGATGGAAAGTGCGGTTTCTTCTCAAATTCCTACCACCGGAGCTTCTGCAGATTCCTCCAACAAGACCAATCACGGTAATGGTGGCTCACTGTTCTAA

Coding sequence (CDS)

ATGTCCAGCCCCGGCGATTGGCTTCAATTTTACCATCAAAATCTTTCTACCACGGCGGCGCCACCACCACCTTCCGATTTACCCACCTCCTCTGCAATGATCTTTGCAGAACGAGTTTCTGACGCCACCGCCGTCCCCACTACTTCCGCTGCTATCATCGGAAGTTCGGCTGGAAACACCGGCTTGAATCCGGAAGGTCGTGTCGGAAAGCCGATTCGTCGCCGGTCCAGAGCGTCACGGCGGACTCCGACGACGTTGCTCAACACGGATACGACGAATTTCAGAGCGATGGTTCAGCAATTCACTGGAGGTCCGACTTCTTCTTTCGCCTCATCGATTTCCCCCAATTTTCCGCTAGGGTTCCGCGGGATTTGTCAATCGAATTTCGGTACTCCACCGTACGCCGTGATTTCTCCACCGTCTGATTATCTACAACCGCCGCAGTTTTATCATTCCAACCCCCAGCCGTTCATGTTTCCGGCCGCTGCACATGGCGGAGACTTTACGCAGAGGATTTCCGTTGCGAGGCCGGCTAATGACGGAGTCGCCGGAGATGGATTTCTGATGGAAAGTGCGGTTTCTTCTCAAATTCCTACCACCGGAGCTTCTGCAGATTCCTCCAACAAGACCAATCACGGTAATGGTGGCTCACTGTTCTAA

Protein sequence

MSSPGDWLQFYHQNLSTTAAPPPPSDLPTSSAMIFAERVSDATAVPTTSAAIIGSSAGNTGLNPEGRVGKPIRRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPTSSFASSISPNFPLGFRGICQSNFGTPPYAVISPPSDYLQPPQFYHSNPQPFMFPAAAHGGDFTQRISVARPANDGVAGDGFLMESAVSSQIPTTGASADSSNKTNHGNGGSLF

Homology

[Close]

BLAST of Carg13137 vs. NCBI nr
Match: XP_022943215.1 (VQ motif-containing protein 22-like [Cucurbita moschata])

HSP 1 Score: 362.1 bits (928), Expect = 1.4e-96
Identity = 207/219 (94.52%), Postives = 207/219 (94.52%), Query Frame = 0


Query: 1   MSSPGDWLQFYHQNLSTXXXXXXXXDLPTSSAMIFAERVSDATAVPTTSAAIIGSSAGNT 60
           MSSPGDWLQFYHQNLST        DLPTSSAMIFAERVSDATAVPTTSAAIIGSSAGN 
Sbjct: 1   MSSPGDWLQFYHQNLSTTAAPQPPSDLPTSSAMIFAERVSDATAVPTTSAAIIGSSAGNP 60

Query: 61  GLNPEGRVGKPIRRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPTSSFASSISPNFPLG 120
           GLNPEGRVGKPIRRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPTSSFASSISPNFPLG
Sbjct: 61  GLNPEGRVGKPIRRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPTSSFASSISPNFPLG 120

Query: 121 FRGICQSNFGTPPYAVISXXXXXXXXXXXXXXXXQPFMFPAAAHGGDFTQRISVARPAND 180
           FRGICQSNFGTPP AVI XXXXXXXXXXXXXXXX PFMFPAAAHGGDFTQRISVARPAND
Sbjct: 121 FRGICQSNFGTPPNAVIXXXXXXXXXXXXXXXXXXPFMFPAAAHGGDFTQRISVARPAND 180

Query: 181 GVAGDGFLMESAVSSQIPTTGASADSSNKTNHGNGGSLF 220
           GVAGDGFLMESAVSSQIPTTGASADSSNKTNHGNGGSLF
Sbjct: 181 GVAGDGFLMESAVSSQIPTTGASADSSNKTNHGNGGSLF 219

[Close]

BLAST of Carg13137 vs. NCBI nr
Match: XP_023529552.1 (VQ motif-containing protein 22-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 359.0 bits (920), Expect = 1.1e-95
Identity = 213/219 (97.26%), Postives = 213/219 (97.26%), Query Frame = 0


Query: 1   MSSPGDWLQFYHQNLSTXXXXXXXXDLPTSSAMIFAERVSDATAVPTTSAAIIGSSAGNT 60
           MSSPGDWLQFYHQNLSTXXXXXXXXDLPTSSAMIFAERVSDATAVPTTSAAIIGSSAGNT
Sbjct: 1   MSSPGDWLQFYHQNLSTXXXXXXXXDLPTSSAMIFAERVSDATAVPTTSAAIIGSSAGNT 60

Query: 61  GLNPEGRVGKPIRRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPTSSFASSISPNFPLG 120
           GLNPEGRVGKPIRRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPTSSFASSISPNFPLG
Sbjct: 61  GLNPEGRVGKPIRRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPTSSFASSISPNFPLG 120

Query: 121 FRGICQSNFGTPPYAVISXXXXXXXXXXXXXXXXQPFMFPAAAHGGDFTQRISVARPAND 180
           FRGICQSNFGTPP AVI XXXXXXXXXXXXXXXX PFMFPAAAHGGDF QRISVARPAND
Sbjct: 121 FRGICQSNFGTPPNAVIXXXXXXXXXXXXXXXXXXPFMFPAAAHGGDFMQRISVARPAND 180

Query: 181 GVAGDGFLMESAVSSQIPTTGASADSSNKTNHGNGGSLF 220
           G  GDGFLMESAVSSQIPTTGASADSSNKTNHGNGGSLF
Sbjct: 181 GATGDGFLMESAVSSQIPTTGASADSSNKTNHGNGGSLF 219

[Close]

BLAST of Carg13137 vs. NCBI nr
Match: XP_022982664.1 (VQ motif-containing protein 22-like [Cucurbita maxima])

HSP 1 Score: 354.4 bits (908), Expect = 2.8e-94
Identity = 190/219 (86.76%), Postives = 190/219 (86.76%), Query Frame = 0


Query: 1   MSSPGDWLQFYHQNLSTXXXXXXXXDLPTSSAMIFAERVSDATAVPTTSAAIIGSSAGNT 60
           MSSPGDWLQFYHQNLST        DLPTSSA IFAERVSDATAVPTTSAAIIGSSAGNT
Sbjct: 1   MSSPGDWLQFYHQNLST-TAPPPPSDLPTSSATIFAERVSDATAVPTTSAAIIGSSAGNT 60

Query: 61  GLNPEGRVGKPIRRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPTSSFASSISPNFPLG 120
           GLNPEGRVGKPIRRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPTSS ASSISPNFPLG
Sbjct: 61  GLNPEGRVGKPIRRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPTSSSASSISPNFPLG 120

Query: 121 FRGICQSNFGTPPYAVISXXXXXXXXXXXXXXXXQPFMFPAAAHGGDFTQRISVARPAND 180
           FRGICQSNFGTPP AVIS                QPFMFPAAAHGGDF QRISVARPAND
Sbjct: 121 FRGICQSNFGTPPNAVISPPSDYLQLPQFYHSHPQPFMFPAAAHGGDFLQRISVARPAND 180

Query: 181 GVAGDGFLMESAVSSQIPTTGASADSSNKTNHGNGGSLF 220
           GVAGDGFLMESAVSSQIPTTGASADSSNKTNHGNG SLF
Sbjct: 181 GVAGDGFLMESAVSSQIPTTGASADSSNKTNHGNGASLF 218

[Close]

BLAST of Carg13137 vs. NCBI nr
Match: XP_011653250.1 (PREDICTED: VQ motif-containing protein 22-like [Cucumis sativus])

HSP 1 Score: 247.3 bits (630), Expect = 4.9e-62
Identity = 141/218 (64.68%), Postives = 156/218 (71.56%), Query Frame = 0


Query: 5   GDWLQFYHQNLSTXXXXXXXXDLPTSSAMIFAERVSDATAVPTTSAAIIGSSAGNTGLNP 64
           GDWLQFYHQNLS+           ++S M F +RVSDAT V TT+A++  ++ G+TGLNP
Sbjct: 3   GDWLQFYHQNLSSTAAPPPSDH--STSEMFFVDRVSDATGVITTTASV--NTLGSTGLNP 62

Query: 65  EGRVGKPIRRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPTSSFASSISPNFPLGFRGI 124
           EGRVGKP+RRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPT  F SSISPNF LGF GI
Sbjct: 63  EGRVGKPVRRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPTPPFTSSISPNFSLGFGGI 122

Query: 125 CQSNFGTPPYAVIS---XXXXXXXXXXXXXXXXQPFMFPAAAHGGDFTQRISVARPANDG 184
            QSNF T   A IS                   Q FMFP  AHGGDF QR+S  RPAN  
Sbjct: 123 HQSNFPTSQNATISPPPSGYLLQQPPQLYNHNPQQFMFPTVAHGGDFLQRLSAPRPANGA 182

Query: 185 VAGDGFLMESAVSSQIPTTGASADSSNKTNHGNGGSLF 220
           VAGDGFL+ESAVSSQIP  GASADSSN++N GNG  LF
Sbjct: 183 VAGDGFLIESAVSSQIPPAGASADSSNESNGGNGRLLF 216

[Close]

BLAST of Carg13137 vs. NCBI nr
Match: XP_008451884.1 (PREDICTED: VQ motif-containing protein 22-like [Cucumis melo])

HSP 1 Score: 245.0 bits (624), Expect = 2.4e-61
Identity = 149/218 (68.35%), Postives = 157/218 (72.02%), Query Frame = 0


Query: 5   GDWLQFYHQNLSTXXXXXXXXDLPTSSAMIFAERVSDATAVPTTSAAIIGSSAGNTGLNP 64
           GDWLQFYHQNLS  XXXXXXX     S MIFA+RVSDATA   T         G+TGLNP
Sbjct: 3   GDWLQFYHQNLS--XXXXXXXXXXXXSEMIFADRVSDATASANT--------LGSTGLNP 62

Query: 65  EGRVGKPIRRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPTSSFASSISPNFPLGFRGI 124
           EGRVGKP+RRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPT  F SSISPNF LGF GI
Sbjct: 63  EGRVGKPVRRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPTPPFTSSISPNFSLGFGGI 122

Query: 125 CQSNFGTPPYAVIS---XXXXXXXXXXXXXXXXQPFMFPAAAHGGDFTQRISVARPANDG 184
            QSNF T   A IS                   QPF+FP  AHGGDF QR+S  RPAN G
Sbjct: 123 RQSNFSTSQNAAISPPPSGYLLQQPPQLYNHNPQPFVFPTVAHGGDFLQRLSAPRPANGG 182

Query: 185 VAGDGFLMESAVSSQIPTTGASADSSNKTNHGNGGSLF 220
           VAGDGFL+ESAVSSQIP  GASADSSN++N GNG  LF
Sbjct: 183 VAGDGFLIESAVSSQIPPAGASADSSNESNGGNGRLLF 210

[Close]

BLAST of Carg13137 vs. TAIR10
Match: AT3G22160.1 (VQ motif-containing protein)

HSP 1 Score: 75.5 bits (184), Expect = 4.6e-14
Identity = 39/47 (82.98%), Postives = 44/47 (93.62%), Query Frame = 0


Query: 62  LNPE-GRVGKPIRRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPTS 108
           L+PE GRV KP RRRSRASRRTPTTLLNTDT+NFRAMVQQ+TGGP++
Sbjct: 43  LSPETGRVTKPTRRRSRASRRTPTTLLNTDTSNFRAMVQQYTGGPSA 89

[Close]

BLAST of Carg13137 vs. TAIR10
Match: AT5G65170.1 (VQ motif-containing protein)

HSP 1 Score: 57.4 bits (137), Expect = 1.3e-08
Identity = 28/46 (60.87%), Postives = 38/46 (82.61%), Query Frame = 0


Query: 73  RRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPTSSFASSISPNFP 119
           ++RSR SRR PTT+L TDT+NFRAMVQ+FTG P++ F + +S +FP
Sbjct: 140 KKRSRVSRRAPTTVLTTDTSNFRAMVQEFTGNPSTPF-TGLSSSFP 184

[Close]

BLAST of Carg13137 vs. TAIR10
Match: AT4G39720.1 (VQ motif-containing protein)

HSP 1 Score: 56.6 bits (135), Expect = 2.2e-08
Identity = 30/53 (56.60%), Postives = 39/53 (73.58%), Query Frame = 0


Query: 55  SSAGNTGLNPEGRVG--KPIRRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGP 106
           +S+  + L P   +G  K  ++RSRASRR PTT+L TDT+NFRAMVQ+FTG P
Sbjct: 95  TSSATSSLPPTNNIGVIKKTKKRSRASRRAPTTVLTTDTSNFRAMVQEFTGIP 147

[Close]

BLAST of Carg13137 vs. TAIR10
Match: AT4G15120.1 (VQ motif-containing protein)

HSP 1 Score: 53.5 bits (127), Expect = 1.9e-07
Identity = 28/39 (71.79%), Postives = 31/39 (79.49%), Query Frame = 0


Query: 82  TPTTLLNTDTTNFRAMVQQFTGGPTS-SFASSISPNFPL 120
           TPTTL NTDT NFRAMVQQFTGGP++ +F SS S  F L
Sbjct: 60  TPTTLFNTDTANFRAMVQQFTGGPSAVAFGSSPSSGFSL 98

[Close]

BLAST of Carg13137 vs. TAIR10
Match: AT4G20000.1 (VQ motif-containing protein)

HSP 1 Score: 43.5 bits (101), Expect = 1.9e-04
Identity = 29/59 (49.15%), Postives = 39/59 (66.10%), Query Frame = 0


Query: 46  PTTSAAIIGSSAGNTGLNPEGRVGKPIRRRSRASRRT-PTTLLNTDTTNFRAMVQQFTG 104
           P  +A  I SS+G++  +      +   RRSRASRR  PTTLLN + +NFRA+VQ+FTG
Sbjct: 23  PCFNAINIASSSGSSLGDGGAAAHEAAGRRSRASRRAIPTTLLNANPSNFRALVQKFTG 81

[Close]

BLAST of Carg13137 vs. Swiss-Prot
Match: sp|Q9LIE6|VQ22_ARATH (VQ motif-containing protein 22 OS=Arabidopsis thaliana OX=3702 GN=VQ22 PE=2 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 8.3e-13
Identity = 39/47 (82.98%), Postives = 44/47 (93.62%), Query Frame = 0


Query: 62  LNPE-GRVGKPIRRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPTS 108
           L+PE GRV KP RRRSRASRRTPTTLLNTDT+NFRAMVQQ+TGGP++
Sbjct: 43  LSPETGRVTKPTRRRSRASRRTPTTLLNTDTSNFRAMVQQYTGGPSA 89

[Close]

BLAST of Carg13137 vs. TrEMBL
Match: tr|A0A1S3BTN7|A0A1S3BTN7_CUCME (VQ motif-containing protein 22-like OS=Cucumis melo OX=3656 GN=LOC103493042 PE=4 SV=1)

HSP 1 Score: 245.0 bits (624), Expect = 1.6e-61
Identity = 149/218 (68.35%), Postives = 157/218 (72.02%), Query Frame = 0


Query: 5   GDWLQFYHQNLSTXXXXXXXXDLPTSSAMIFAERVSDATAVPTTSAAIIGSSAGNTGLNP 64
           GDWLQFYHQNLS  XXXXXXX     S MIFA+RVSDATA   T         G+TGLNP
Sbjct: 3   GDWLQFYHQNLS--XXXXXXXXXXXXSEMIFADRVSDATASANT--------LGSTGLNP 62

Query: 65  EGRVGKPIRRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPTSSFASSISPNFPLGFRGI 124
           EGRVGKP+RRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPT  F SSISPNF LGF GI
Sbjct: 63  EGRVGKPVRRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPTPPFTSSISPNFSLGFGGI 122

Query: 125 CQSNFGTPPYAVIS---XXXXXXXXXXXXXXXXQPFMFPAAAHGGDFTQRISVARPANDG 184
            QSNF T   A IS                   QPF+FP  AHGGDF QR+S  RPAN G
Sbjct: 123 RQSNFSTSQNAAISPPPSGYLLQQPPQLYNHNPQPFVFPTVAHGGDFLQRLSAPRPANGG 182

Query: 185 VAGDGFLMESAVSSQIPTTGASADSSNKTNHGNGGSLF 220
           VAGDGFL+ESAVSSQIP  GASADSSN++N GNG  LF
Sbjct: 183 VAGDGFLIESAVSSQIPPAGASADSSNESNGGNGRLLF 210

[Close]

BLAST of Carg13137 vs. TrEMBL
Match: tr|A0A0A0KV74|A0A0A0KV74_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G056730 PE=4 SV=1)

HSP 1 Score: 215.3 bits (547), Expect = 1.4e-52
Identity = 121/192 (63.02%), Postives = 135/192 (70.31%), Query Frame = 0


Query: 5   GDWLQFYHQNLSTXXXXXXXXDLPTSSAMIFAERVSDATAVPTTSAAIIGSSAGNTGLNP 64
           GDWLQFYHQNLS+           ++S M F +RVSDAT V TT+A++  ++ G+TGLNP
Sbjct: 3   GDWLQFYHQNLSSTAAPPPSDH--STSEMFFVDRVSDATGVITTTASV--NTLGSTGLNP 62

Query: 65  EGRVGKPIRRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPTSSFASSISPNFPLGFRGI 124
           EGRVGKP+RRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPT  F SSISPNF LGF GI
Sbjct: 63  EGRVGKPVRRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPTPPFTSSISPNFSLGFGGI 122

Query: 125 CQSNFGTPPYAVIS---XXXXXXXXXXXXXXXXQPFMFPAAAHGGDFTQRISVARPANDG 184
            QSNF T   A IS                   Q FMFP  AHGGDF QR+S  RPAN  
Sbjct: 123 HQSNFPTSQNATISPPPSGYLLQQPPQLYNHNPQQFMFPTVAHGGDFLQRLSAPRPANGA 182

Query: 185 VAGDGFLMESAV 194
           VAGDGFL+ESA+
Sbjct: 183 VAGDGFLIESAI 190

[Close]

BLAST of Carg13137 vs. TrEMBL
Match: tr|A0A2I4FG60|A0A2I4FG60_9ROSI (VQ motif-containing protein 22-like OS=Juglans regia OX=51240 GN=LOC108998517 PE=4 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 1.9e-30
Identity = 108/232 (46.55%), Postives = 131/232 (56.47%), Query Frame = 0


Query: 1   MSSPGDWLQFYHQNLSTXXXXXXXXDLPTSSAMIFAERVSDATAVPTT-------SAAII 60
           MS P DWLQFYHQNL            P S A++   RVSDAT V TT       S+   
Sbjct: 1   MSGPSDWLQFYHQNLPNQVTSPGH---PVSGALL-DNRVSDATVVSTTVTSPTTLSSLGS 60

Query: 61  GSSAGNTG--LNPEGRVGKPIRRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPTSSFAS 120
           GSS  +TG  L+PEGRV KPIRRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPT+ FAS
Sbjct: 61  GSSIPDTGGHLSPEGRVSKPIRRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPTAPFAS 120

Query: 121 SI---SPNFPLGFRGICQSNFGTPPYAVI---SXXXXXXXXXXXXXXXXQPFMFPAAAH- 180
                +PNF  G  G  Q+     P A++                    Q ++F   ++ 
Sbjct: 121 GAHAGAPNFGFGL-GTHQAGHVNNPTAMMMPPGRGYHLQPQPQLYHPQSQQYLFSLGSNN 180

Query: 181 ---GGDFTQRISVARPANDGVAGDGFLMES-AVSSQIPTTGASADS-SNKTN 212
              G  F QR+  +RP + GV+ DGF+ME  + SSQ+P+      S  N+TN
Sbjct: 181 AQAGDPFLQRLGSSRPRSIGVS-DGFVMEGVSSSSQVPSARPPGSSDENRTN 226

[Close]

BLAST of Carg13137 vs. TrEMBL
Match: tr|A0A2I4F9H6|A0A2I4F9H6_9ROSI (VQ motif-containing protein 22-like OS=Juglans regia OX=51240 GN=LOC108996736 PE=4 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 1.2e-27
Identity = 103/238 (43.28%), Postives = 129/238 (54.20%), Query Frame = 0


Query: 1   MSSPGDWLQFYHQNLSTXXXXXXXXDLPTSSAMIFAERVSDATAVPTTSAAI-------- 60
           MS PGDW QFY  NLS+                +   RVSD T V +T  ++        
Sbjct: 5   MSGPGDWFQFYPHNLSSQATSPGHA-ASRPPPDLLDSRVSDDTVVTSTVTSVATLMTPLG 64

Query: 61  ---IGSSAGN--TG--LNPEGRVGKPIRRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGP 120
               G+S+ N  TG  L+PEGRV KPIRRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGP
Sbjct: 65  SGGAGTSSSNMSTGHPLSPEGRVSKPIRRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGP 124

Query: 121 TSSFASS----ISPNFPLGFRGICQSNFGTPPYAVISXXXXXXXXXXXXXXXXQP----F 180
           +++FAS+     +PNF  G     +      P A++                 QP    +
Sbjct: 125 SATFASAGAHPGAPNFGFGLGAAGRQAHVNNPTAMMLPPGRGYHHLQPQPQLYQPQSQQY 184

Query: 181 MFPAA---AHGGDFTQRISVARPANDGVAGDGFLMESAVSS-QIPTTGASADSSNKTN 212
           MF      A G  F QR+S +RP N GV+ DGFLME   SS Q+P   +S+ + N++N
Sbjct: 185 MFSLGSNNAPGDAFLQRLSSSRPPNAGVS-DGFLMEGVSSSFQVPRP-SSSSNENRSN 239

[Close]

BLAST of Carg13137 vs. TrEMBL
Match: tr|A0A2P5AWU3|A0A2P5AWU3_9ROSA (VQ motif containing protein OS=Trema orientalis OX=63057 GN=TorRG33x02_339030 PE=4 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 7.8e-24
Identity = 80/148 (54.05%), Postives = 97/148 (65.54%), Query Frame = 0


Query: 1   MSSPGDWLQFYHQNLSTXXXXXXXXDLPTSSAMIFAERVSDATAVPTTSAAI-IGS---- 60
           MS+P +W+QFY+QN S            T+   +FA+RVSDAT V T +AA  +GS    
Sbjct: 5   MSNPTEWMQFYNQNFS---GGSHQGATTTTHPTLFADRVSDATVVTTAAAATPLGSGSSS 64

Query: 61  ----SAGNTGLNPE-GRVGKPIRRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPTSSFA 120
               +AG+  L+PE GRV KPIRRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGP++ FA
Sbjct: 65  PTAATAGSNRLSPEGGRVSKPIRRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPSAPFA 124

Query: 121 SS-ISPNFPLGFRGICQSNFGTPPYAVI 138
           +S   P F  G  G  QS F  P   ++
Sbjct: 125 ASGTGPGFSFGL-GTRQS-FANPSAGMV 147

The following BLAST results are available for this feature:

BLAST of Carg13137 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022943215.1	1.4e-96	94.52	VQ motif-containing protein 22-like [Cucurbita moschata]	[more]
XP_023529552.1	1.1e-95	97.26	VQ motif-containing protein 22-like [Cucurbita pepo subsp. pepo]	[more]
XP_022982664.1	2.8e-94	86.76	VQ motif-containing protein 22-like [Cucurbita maxima]	[more]
XP_011653250.1	4.9e-62	64.68	PREDICTED: VQ motif-containing protein 22-like [Cucumis sativus]	[more]
XP_008451884.1	2.4e-61	68.35	PREDICTED: VQ motif-containing protein 22-like [Cucumis melo]	[more]

BLAST of Carg13137 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G22160.1	4.6e-14	82.98	VQ motif-containing protein	[more]
AT5G65170.1	1.3e-08	60.87	VQ motif-containing protein	[more]
AT4G39720.1	2.2e-08	56.60	VQ motif-containing protein	[more]
AT4G15120.1	1.9e-07	71.79	VQ motif-containing protein	[more]
AT4G20000.1	1.9e-04	49.15	VQ motif-containing protein	[more]

BLAST of Carg13137 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9LIE6\|VQ22_ARATH	8.3e-13	82.98	VQ motif-containing protein 22 OS=Arabidopsis thaliana OX=3702 GN=VQ22 PE=2 SV=1	[more]

BLAST of Carg13137 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BTN7\|A0A1S3BTN7_CUCME	1.6e-61	68.35	VQ motif-containing protein 22-like OS=Cucumis melo OX=3656 GN=LOC103493042 PE=4...	[more]
tr\|A0A0A0KV74\|A0A0A0KV74_CUCSA	1.4e-52	63.02	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G056730 PE=4 SV=1	[more]
tr\|A0A2I4FG60\|A0A2I4FG60_9ROSI	1.9e-30	46.55	VQ motif-containing protein 22-like OS=Juglans regia OX=51240 GN=LOC108998517 PE...	[more]
tr\|A0A2I4F9H6\|A0A2I4F9H6_9ROSI	1.2e-27	43.28	VQ motif-containing protein 22-like OS=Juglans regia OX=51240 GN=LOC108996736 PE...	[more]
tr\|A0A2P5AWU3\|A0A2P5AWU3_9ROSA	7.8e-24	54.05	VQ motif containing protein OS=Trema orientalis OX=63057 GN=TorRG33x02_339030 PE...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR008889	VQ

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg13137-RA	Carg13137-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008889	VQ	PFAM	PF05678	VQ	coord: 81..106 e-value: 1.0E-9 score: 37.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 198..219
None	No IPR available	PANTHER	PTHR33179	FAMILY NOT NAMED	coord: 40..214
None	No IPR available	PANTHER	PTHR33179:SF7	VQ MOTIF-CONTAINING PROTEIN 22	coord: 40..214

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg13137	Cla005447	Watermelon (97103) v1	carwmB0043
Carg13137	Csa4G056730	Cucumber (Chinese Long) v2	carcuB0047
Carg13137	MELO3C016231	Melon (DHL92) v3.5.1	carmeB0044
Carg13137	ClCG07G010990	Watermelon (Charleston Gray)	carwcgB0046
Carg13137	CSPI04G07050	Wild cucumber (PI 183967)	carcpiB0051
Carg13137	Cucsa.180120	Cucumber (Gy14) v1	carcgyB0052
Carg13137	CmaCh04G006070	Cucurbita maxima (Rimu)	carcmaB0055
Carg13137	CmaCh16G004950	Cucurbita maxima (Rimu)	carcmaB0052
Carg13137	CmoCh04G006510	Cucurbita moschata (Rifu)	carcmoB0058
Carg13137	Lsi07G007880	Bottle gourd (USVL1VR-Ls)	carlsiB043
Carg13137	Cp4.1LG14g03000	Cucurbita pepo (Zucchini)	carcpeB0057
Carg13137	Cp4.1LG01g01160	Cucurbita pepo (Zucchini)	carcpeB0061
Carg13137	CsGy4G006970	Cucumber (Gy14) v2	carcgybB0047
Carg13137	MELO3C016231.2	Melon (DHL92) v3.6.1	carmedB0047
Carg13137	CsaV3_4G007280	Cucumber (Chinese Long) v3	carcucB0052
Carg13137	Cla97C07G137730	Watermelon (97103) v2	carwmbB0043
Carg13137	Bhi01G002369	Wax gourd	carwgoB0053

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg13137	Carg11411	Silver-seed gourd	carcarB050

The following block(s) are covering this gene:


Gene	Organism	Block
Carg13137	Cucurbita moschata (Rifu)	carcmoB0054
Carg13137	Melon (DHL92) v3.5.1	carmeB0042
Carg13137	Melon (DHL92) v3.6.1	carmedB0043
Carg13137	Melon (DHL92) v3.6.1	carmedB0045