Carg11411 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg11411
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	VQ motif-containing protein 22-like
Location	Cucurbita_argyrosperma_scaffold_025 : 882137 .. 882748 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCCGGCCCTGGCGATTGGCTTCAATTTTACCATCAAAATCTTCCTACCACGGCGGCGCCACCGCCTTCCGATCAATCCACCTCCGAGATGATCTTCGCCGATCGAGTTTCCGACGCCATCGCCTCCGCAAACACCGGCGCTTCCACTGGCTTGAATCCGGAACGTCGTGTAGCAAAGCCGGTTCGCCGCCGGTCCAGGACGTCTCGGCGGACTCCGACGACCTTGCTCAATACAGACACAACTAATTTCAGAGCGATGGTTCAACAATTCACCGGCGGTCCAACTCCGCCTTTCGCCTCATCGATTTCCCCCAATTTTTCGTTAGGGTTCGGCGCGATTCCTCAATCGAATTCCGGCTTGATTTCTCCGCCGTCTGGTTATCCACTGCAGTTTTACCATCACAACCCCCAACCGTTCGTGATTCCAGCATCCGCACACGGCGGAGAATTTCTTCAGAGGCTATCCGCCGCGAAGCCAGGTAATGGCGGAATCGCCGCAGACGGATTTCTGATGGAAAGTGCAATTTCTTCTCAAATTCCTCCAGCCGGAGCTTCTGCAGATTCCTCCAACAAGAGCAACGGCGGTAATGGCGGCGGCTTTCTGTTCTGA

mRNA sequence

ATGTCCGGCCCTGGCGATTGGCTTCAATTTTACCATCAAAATCTTCCTACCACGGCGGCGCCACCGCCTTCCGATCAATCCACCTCCGAGATGATCTTCGCCGATCGAGTTTCCGACGCCATCGCCTCCGCAAACACCGGCGCTTCCACTGGCTTGAATCCGGAACGTCGTGTAGCAAAGCCGGTTCGCCGCCGGTCCAGGACGTCTCGGCGGACTCCGACGACCTTGCTCAATACAGACACAACTAATTTCAGAGCGATGGTTCAACAATTCACCGGCGGTCCAACTCCGCCTTTCGCCTCATCGATTTCCCCCAATTTTTCGTTAGGGTTCGGCGCGATTCCTCAATCGAATTCCGGCTTGATTTCTCCGCCGTCTGGTTATCCACTGCAGTTTTACCATCACAACCCCCAACCGTTCGTGATTCCAGCATCCGCACACGGCGGAGAATTTCTTCAGAGGCTATCCGCCGCGAAGCCAGGTAATGGCGGAATCGCCGCAGACGGATTTCTGATGGAAAGTGCAATTTCTTCTCAAATTCCTCCAGCCGGAGCTTCTGCAGATTCCTCCAACAAGAGCAACGGCGGTAATGGCGGCGGCTTTCTGTTCTGA

Coding sequence (CDS)

ATGTCCGGCCCTGGCGATTGGCTTCAATTTTACCATCAAAATCTTCCTACCACGGCGGCGCCACCGCCTTCCGATCAATCCACCTCCGAGATGATCTTCGCCGATCGAGTTTCCGACGCCATCGCCTCCGCAAACACCGGCGCTTCCACTGGCTTGAATCCGGAACGTCGTGTAGCAAAGCCGGTTCGCCGCCGGTCCAGGACGTCTCGGCGGACTCCGACGACCTTGCTCAATACAGACACAACTAATTTCAGAGCGATGGTTCAACAATTCACCGGCGGTCCAACTCCGCCTTTCGCCTCATCGATTTCCCCCAATTTTTCGTTAGGGTTCGGCGCGATTCCTCAATCGAATTCCGGCTTGATTTCTCCGCCGTCTGGTTATCCACTGCAGTTTTACCATCACAACCCCCAACCGTTCGTGATTCCAGCATCCGCACACGGCGGAGAATTTCTTCAGAGGCTATCCGCCGCGAAGCCAGGTAATGGCGGAATCGCCGCAGACGGATTTCTGATGGAAAGTGCAATTTCTTCTCAAATTCCTCCAGCCGGAGCTTCTGCAGATTCCTCCAACAAGAGCAACGGCGGTAATGGCGGCGGCTTTCTGTTCTGA

Protein sequence

MSGPGDWLQFYHQNLPTTAAPPPSDQSTSEMIFADRVSDAIASANTGASTGLNPERRVAKPVRRRSRTSRRTPTTLLNTDTTNFRAMVQQFTGGPTPPFASSISPNFSLGFGAIPQSNSGLISPPSGYPLQFYHHNPQPFVIPASAHGGEFLQRLSAAKPGNGGIAADGFLMESAISSQIPPAGASADSSNKSNGGNGGGFLF

Homology

[Close]

BLAST of Carg11411 vs. NCBI nr
Match: XP_022985096.1 (VQ motif-containing protein 22-like [Cucurbita maxima])

HSP 1 Score: 347.4 bits (890), Expect = 3.2e-92
Identity = 196/203 (96.55%), Postives = 198/203 (97.54%), Query Frame = 0


Query: 1   MSGPGDWLQFYHQNLPTTAAPPPSDQSTSEMIFADRVSDAIASANTGASTGLNPERRVAK 60
           MSGPGDWLQFYHQNLPTTAAPPPSDQSTSEMIF DRVSDAIASANTGASTGLNPERRVAK
Sbjct: 1   MSGPGDWLQFYHQNLPTTAAPPPSDQSTSEMIFVDRVSDAIASANTGASTGLNPERRVAK 60

Query: 61  XXXXXXXXXXXXXXTLLNTDTTNFRAMVQQFTGGPTPPFASSISPNFSLGFGAIPQSNSG 120
            XXXXXXXXXXXXXTLLNTDTTNFRAMVQQFTGGPTPPFASSISPNFSLGFGAIPQSNSG
Sbjct: 61  PXXXXXXXXXXXXXTLLNTDTTNFRAMVQQFTGGPTPPFASSISPNFSLGFGAIPQSNSG 120

Query: 121 LISPPSGYPLQFYHHNPQPFVIPASAHGGEFLQRLSAAKPGNGGIAADGFLMESAISSQI 180
           LISPPSGYPLQFYHHNPQPFVIPASAHGGEFLQRLSAAKPGNGG+AADGFLMESA+SSQI
Sbjct: 121 LISPPSGYPLQFYHHNPQPFVIPASAHGGEFLQRLSAAKPGNGGVAADGFLMESAVSSQI 180

Query: 181 PPAGASADXXXXXXXXXXXGFLF 204
           PPAGASAD  XXXXXXXX GFLF
Sbjct: 181 PPAGASADSSXXXXXXXXGGFLF 203

[Close]

BLAST of Carg11411 vs. NCBI nr
Match: XP_023552946.1 (VQ motif-containing protein 22-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 344.0 bits (881), Expect = 3.5e-91
Identity = 185/203 (91.13%), Postives = 189/203 (93.10%), Query Frame = 0


Query: 1   MSGPGDWLQFYHQNLPTTAAPPPSDQSTSEMIFADRVSDAIASANTGASTGLNPERRVAK 60
           MSGPGDWLQFYHQNLPTTAAPPPSDQSTSEMIF DRVSDAIASANTGASTGLNPERRVAK
Sbjct: 1   MSGPGDWLQFYHQNLPTTAAPPPSDQSTSEMIFVDRVSDAIASANTGASTGLNPERRVAK 60

Query: 61  XXXXXXXXXXXXXXTLLNTDTTNFRAMVQQFTGGPTPPFASSISPNFSLGFGAIPQSNSG 120
            XXXXXXXXXXXXXTLLNTDTTNFRAMVQQFTGGPTPPFASSISPNFSLGFGAIPQSNSG
Sbjct: 61  PXXXXXXXXXXXXXTLLNTDTTNFRAMVQQFTGGPTPPFASSISPNFSLGFGAIPQSNSG 120

Query: 121 LISPPSGYPLQFYHHNPQPFVIPASAHGGEFLQRLSAAKPGNGGIAADGFLMESAISSQI 180
           +ISPPSGYPLQFYHHNPQPFVIPASAHGGEFLQRLSAAKPGNGG+AADGFLMESA+SSQI
Sbjct: 121 MISPPSGYPLQFYHHNPQPFVIPASAHGGEFLQRLSAAKPGNGGVAADGFLMESAVSSQI 180

Query: 181 PPAGASADXXXXXXXXXXXGFLF 204
           PP GA+AD           GFLF
Sbjct: 181 PPTGATADSSNKSNGGSGGGFLF 203

[Close]

BLAST of Carg11411 vs. NCBI nr
Match: XP_022931401.1 (VQ motif-containing protein 22-like [Cucurbita moschata])

HSP 1 Score: 324.3 bits (830), Expect = 2.9e-85
Identity = 178/203 (87.68%), Postives = 182/203 (89.66%), Query Frame = 0


Query: 1   MSGPGDWLQFYHQNLPTTAAPPPSDQSTSEMIFADRVSDAIASANTGASTGLNPERRVAK 60
           MSGPGDWLQFYHQNL        SDQSTSEM+F DRVSDAIASANTGASTGLNPERRVAK
Sbjct: 1   MSGPGDWLQFYHQNLTXXXXXXXSDQSTSEMVFVDRVSDAIASANTGASTGLNPERRVAK 60

Query: 61  XXXXXXXXXXXXXXTLLNTDTTNFRAMVQQFTGGPTPPFASSISPNFSLGFGAIPQSNSG 120
            XXXXXXXXXXXXXTLLNTDTTNFRAMVQQFTGGPTPPFASSISPNFSLGFGAIPQSNSG
Sbjct: 61  PXXXXXXXXXXXXXTLLNTDTTNFRAMVQQFTGGPTPPFASSISPNFSLGFGAIPQSNSG 120

Query: 121 LISPPSGYPLQFYHHNPQPFVIPASAHGGEFLQRLSAAKPGNGGIAADGFLMESAISSQI 180
           LISPPSGYPLQFYHHNPQPF+IPASAHGGEFLQRLSAAKPGNGG+AADGFLME+AISSQI
Sbjct: 121 LISPPSGYPLQFYHHNPQPFMIPASAHGGEFLQRLSAAKPGNGGVAADGFLMENAISSQI 180

Query: 181 PPAGASADXXXXXXXXXXXGFLF 204
           PPAGASAD           GFLF
Sbjct: 181 PPAGASADSSNKSNAGSGGGFLF 203

[Close]

BLAST of Carg11411 vs. NCBI nr
Match: XP_011653250.1 (PREDICTED: VQ motif-containing protein 22-like [Cucumis sativus])

HSP 1 Score: 250.0 bits (637), Expect = 7.0e-63
Identity = 134/200 (67.00%), Postives = 144/200 (72.00%), Query Frame = 0


Query: 5   GDWLQFYHQNLPTTAAPPPSDQSTSEMIFADRVSDA------IASANTGASTGLNPERRV 64
           GDWLQFYHQNL +TAAPPPSD STSEM F DRVSDA       AS NT  STGLNPE RV
Sbjct: 3   GDWLQFYHQNLSSTAAPPPSDHSTSEMFFVDRVSDATGVITTTASVNTLGSTGLNPEGRV 62

Query: 65  AKXXXXXXXXXXXXXXTLLNTDTTNFRAMVQQFTGGPTPPFASSISPNFSLGFGAIPQS- 124
            K              TLLNTDTTNFRAMVQQFTGGPTPPF SSISPNFSLGFG I QS 
Sbjct: 63  GKPVRRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPTPPFTSSISPNFSLGFGGIHQSN 122

Query: 125 -----NSGLISPPSGY----PLQFYHHNPQPFVIPASAHGGEFLQRLSAAKPGNGGIAAD 184
                N+ +  PPSGY    P Q Y+HNPQ F+ P  AHGG+FLQRLSA +P NG +A D
Sbjct: 123 FPTSQNATISPPPSGYLLQQPPQLYNHNPQQFMFPTVAHGGDFLQRLSAPRPANGAVAGD 182

Query: 185 GFLMESAISSQIPPAGASAD 189
           GFL+ESA+SSQIPPAGASAD
Sbjct: 183 GFLIESAVSSQIPPAGASAD 202

[Close]

BLAST of Carg11411 vs. NCBI nr
Match: XP_008451884.1 (PREDICTED: VQ motif-containing protein 22-like [Cucumis melo])

HSP 1 Score: 243.0 bits (619), Expect = 8.5e-61
Identity = 130/194 (67.01%), Postives = 138/194 (71.13%), Query Frame = 0


Query: 5   GDWLQFYHQNLPTTAAPPPSDQSTSEMIFADRVSDAIASANTGASTGLNPERRVAKXXXX 64
           GDWLQFYHQNL             SEMIFADRVSDA ASANT  STGLNPE RV K    
Sbjct: 3   GDWLQFYHQNLSXXXXXXXXXXXXSEMIFADRVSDATASANTLGSTGLNPEGRVGKPVRR 62

Query: 65  XXXXXXXXXXTLLNTDTTNFRAMVQQFTGGPTPPFASSISPNFSLGFGAIPQS------N 124
                     TLLNTDTTNFRAMVQQFTGGPTPPF SSISPNFSLGFG I QS      N
Sbjct: 63  RSRASRRTPTTLLNTDTTNFRAMVQQFTGGPTPPFTSSISPNFSLGFGGIRQSNFSTSQN 122

Query: 125 SGLISPPSGY----PLQFYHHNPQPFVIPASAHGGEFLQRLSAAKPGNGGIAADGFLMES 184
           + +  PPSGY    P Q Y+HNPQPFV P  AHGG+FLQRLSA +P NGG+A DGFL+ES
Sbjct: 123 AAISPPPSGYLLQQPPQLYNHNPQPFVFPTVAHGGDFLQRLSAPRPANGGVAGDGFLIES 182

Query: 185 AISSQIPPAGASAD 189
           A+SSQIPPAGASAD
Sbjct: 183 AVSSQIPPAGASAD 196

[Close]

BLAST of Carg11411 vs. TAIR10
Match: AT4G15120.1 (VQ motif-containing protein)

HSP 1 Score: 50.1 bits (118), Expect = 1.9e-06
Identity = 41/55 (74.55%), Postives = 42/55 (76.36%), Query Frame = 0


Query: 56  RRVAKXXXXXXXXXXXXXXTLLNTDTTNFRAMVQQFTGGPTP-PFASSISPNFSL 110
           RRVA XXXXXXXXXXX   TL NTDT NFRAMVQQFTGGP+   F SS S  FSL
Sbjct: 44  RRVAXXXXXXXXXXXXTPTTLFNTDTANFRAMVQQFTGGPSAVAFGSSPSSGFSL 98

[Close]

BLAST of Carg11411 vs. TAIR10
Match: AT3G22160.1 (VQ motif-containing protein)

HSP 1 Score: 47.4 bits (111), Expect = 1.2e-05
Identity = 36/89 (40.45%), Postives = 46/89 (51.69%), Query Frame = 0


Query: 52  LNPER-RVAKXXXXXXXXXXXXXXTLLNTDTTNFRAMVQQFTGGPTP-PFAS-SISPNFS 111
           L+PE  RV K              TLLNTDT+NFRAMVQQ+TGGP+   F S + +  FS
Sbjct: 43  LSPETGRVTKPTRRRSRASRRTPTTLLNTDTSNFRAMVQQYTGGPSAMAFGSGNTTSAFS 102

Query: 112 LGFGAIPQSNSGLISPPSGYPLQFYHHNP 138
           L   + P + S   +P   +   F  H P
Sbjct: 103 LTSSSDPSAGSSQQAP---WQYNFQPHAP 128

[Close]

BLAST of Carg11411 vs. TAIR10
Match: AT5G65170.1 (VQ motif-containing protein)

HSP 1 Score: 43.5 bits (101), Expect = 1.8e-04
Identity = 24/55 (43.64%), Postives = 30/55 (54.55%), Query Frame = 0


Query: 75  TLLNTDTTNFRAMVQQFTGGPTPPFASSISPNFSLGFGAIPQSNSGLISPPSGYP 130
           T+L TDT+NFRAMVQ+FTG P+ PF    S      F     S+S    P   +P
Sbjct: 152 TVLTTDTSNFRAMVQEFTGNPSTPFTGLSSSFPRSRFDLFGSSSSSSSRPMKPFP 206

[Close]

BLAST of Carg11411 vs. TAIR10
Match: AT4G39720.1 (VQ motif-containing protein)

HSP 1 Score: 42.4 bits (98), Expect = 4.0e-04
Identity = 19/30 (63.33%), Postives = 24/30 (80.00%), Query Frame = 0


Query: 75  TLLNTDTTNFRAMVQQFTGGPTPPFASSIS 105
           T+L TDT+NFRAMVQ+FTG P PP  ++ S
Sbjct: 127 TVLTTDTSNFRAMVQEFTGIPAPPLFNNNS 156

[Close]

BLAST of Carg11411 vs. Swiss-Prot
Match: sp|Q9LIE6|VQ22_ARATH (VQ motif-containing protein 22 OS=Arabidopsis thaliana OX=3702 GN=VQ22 PE=2 SV=1)

HSP 1 Score: 47.4 bits (111), Expect = 2.2e-04
Identity = 36/89 (40.45%), Postives = 46/89 (51.69%), Query Frame = 0


Query: 52  LNPER-RVAKXXXXXXXXXXXXXXTLLNTDTTNFRAMVQQFTGGPTP-PFAS-SISPNFS 111
           L+PE  RV K              TLLNTDT+NFRAMVQQ+TGGP+   F S + +  FS
Sbjct: 43  LSPETGRVTKPTRRRSRASRRTPTTLLNTDTSNFRAMVQQYTGGPSAMAFGSGNTTSAFS 102

Query: 112 LGFGAIPQSNSGLISPPSGYPLQFYHHNP 138
           L   + P + S   +P   +   F  H P
Sbjct: 103 LTSSSDPSAGSSQQAP---WQYNFQPHAP 128

[Close]

BLAST of Carg11411 vs. TrEMBL
Match: tr|A0A1S3BTN7|A0A1S3BTN7_CUCME (VQ motif-containing protein 22-like OS=Cucumis melo OX=3656 GN=LOC103493042 PE=4 SV=1)

HSP 1 Score: 243.0 bits (619), Expect = 5.6e-61
Identity = 130/194 (67.01%), Postives = 138/194 (71.13%), Query Frame = 0


Query: 5   GDWLQFYHQNLPTTAAPPPSDQSTSEMIFADRVSDAIASANTGASTGLNPERRVAKXXXX 64
           GDWLQFYHQNL             SEMIFADRVSDA ASANT  STGLNPE RV K    
Sbjct: 3   GDWLQFYHQNLSXXXXXXXXXXXXSEMIFADRVSDATASANTLGSTGLNPEGRVGKPVRR 62

Query: 65  XXXXXXXXXXTLLNTDTTNFRAMVQQFTGGPTPPFASSISPNFSLGFGAIPQS------N 124
                     TLLNTDTTNFRAMVQQFTGGPTPPF SSISPNFSLGFG I QS      N
Sbjct: 63  RSRASRRTPTTLLNTDTTNFRAMVQQFTGGPTPPFTSSISPNFSLGFGGIRQSNFSTSQN 122

Query: 125 SGLISPPSGY----PLQFYHHNPQPFVIPASAHGGEFLQRLSAAKPGNGGIAADGFLMES 184
           + +  PPSGY    P Q Y+HNPQPFV P  AHGG+FLQRLSA +P NGG+A DGFL+ES
Sbjct: 123 AAISPPPSGYLLQQPPQLYNHNPQPFVFPTVAHGGDFLQRLSAPRPANGGVAGDGFLIES 182

Query: 185 AISSQIPPAGASAD 189
           A+SSQIPPAGASAD
Sbjct: 183 AVSSQIPPAGASAD 196

[Close]

BLAST of Carg11411 vs. TrEMBL
Match: tr|A0A0A0KV74|A0A0A0KV74_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G056730 PE=4 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 1.9e-56
Identity = 126/197 (63.96%), Postives = 135/197 (68.53%), Query Frame = 0


Query: 5   GDWLQFYHQNLPTTAAPPPSDQSTSEMIFADRVSDA------IASANTGASTGLNPERRV 64
           GDWLQFYHQNL +TAAPPPSD STSEM F DRVSDA       AS NT  STGLNPE RV
Sbjct: 3   GDWLQFYHQNLSSTAAPPPSDHSTSEMFFVDRVSDATGVITTTASVNTLGSTGLNPEGRV 62

Query: 65  AKXXXXXXXXXXXXXXTLLNTDTTNFRAMVQQFTGGPTPPFASSISPNFSLGFGAIPQS- 124
            K              TLLNTDTTNFRAMVQQFTGGPTPPF SSISPNFSLGFG I QS 
Sbjct: 63  GKPVRRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPTPPFTSSISPNFSLGFGGIHQSN 122

Query: 125 -----NSGLISPPSGY----PLQFYHHNPQPFVIPASAHGGEFLQRLSAAKPGNGGIAAD 184
                N+ +  PPSGY    P Q Y+HNPQ F+ P  AHGG+FLQRLSA +P NG +A D
Sbjct: 123 FPTSQNATISPPPSGYLLQQPPQLYNHNPQQFMFPTVAHGGDFLQRLSAPRPANGAVAGD 182

Query: 185 GFLMESAISSQIPPAGA 186
           GFL+ESA    IPP  A
Sbjct: 183 GFLIESA----IPPTRA 195

[Close]

BLAST of Carg11411 vs. TrEMBL
Match: tr|A0A2I4FG60|A0A2I4FG60_9ROSI (VQ motif-containing protein 22-like OS=Juglans regia OX=51240 GN=LOC108998517 PE=4 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 1.0e-25
Identity = 90/217 (41.47%), Postives = 116/217 (53.46%), Query Frame = 0


Query: 1   MSGPGDWLQFYHQNLPTTAAPPPSDQSTSEMIFADRVSDA------------IASANTGA 60
           MSGP DWLQFYHQNLP     P      S  +  +RVSDA            ++S  +G+
Sbjct: 1   MSGPSDWLQFYHQNLPNQVTSP--GHPVSGALLDNRVSDATVVSTTVTSPTTLSSLGSGS 60

Query: 61  S---TG--LNPERRVAKXXXXXXXXXXXXXXTLLNTDTTNFRAMVQQFTGGPTPPFASSI 120
           S   TG  L+PE RV+K              TLLNTDTTNFRAMVQQFTGGPT PFAS  
Sbjct: 61  SIPDTGGHLSPEGRVSKPIRRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPTAPFASGA 120

Query: 121 ---SPNFSLGFGA-----IPQSNSGLISPPSGYPL----QFYHHNPQPFVIPASAH---- 180
              +PNF  G G      +    + ++ P  GY L    Q YH   Q ++    ++    
Sbjct: 121 HAGAPNFGFGLGTHQAGHVNNPTAMMMPPGRGYHLQPQPQLYHPQSQQYLFSLGSNNAQA 180

Query: 181 GGEFLQRLSAAKPGNGGIAADGFLMES-AISSQIPPA 184
           G  FLQRL +++P + G+ +DGF+ME  + SSQ+P A
Sbjct: 181 GDPFLQRLGSSRPRSIGV-SDGFVMEGVSSSSQVPSA 214

[Close]

BLAST of Carg11411 vs. TrEMBL
Match: tr|A0A2I4F9H6|A0A2I4F9H6_9ROSI (VQ motif-containing protein 22-like OS=Juglans regia OX=51240 GN=LOC108996736 PE=4 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 2.0e-21
Identity = 88/235 (37.45%), Postives = 115/235 (48.94%), Query Frame = 0


Query: 1   MSGPGDWLQFYHQNLPTTAA--------PPP-------SDQS--TSEMIFADRVSDAIAS 60
           MSGPGDW QFY  NL + A         PPP       SD +  TS +     +   + S
Sbjct: 5   MSGPGDWFQFYPHNLSSQATSPGHAASRPPPDLLDSRVSDDTVVTSTVTSVATLMTPLGS 64

Query: 61  ANTGASTG-------LNPERRVAKXXXXXXXXXXXXXXTLLNTDTTNFRAMVQQFTGGPT 120
              G S+        L+PE RV+K              TLLNTDTTNFRAMVQQFTGGP+
Sbjct: 65  GGAGTSSSNMSTGHPLSPEGRVSKPIRRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPS 124

Query: 121 PPFASS----ISPNFSLGFGA------IPQSNSGLISPPSGYPLQFYHHNPQPFVIPA-- 180
             FAS+     +PNF  G GA      +    + ++ P  GY    +H  PQP +     
Sbjct: 125 ATFASAGAHPGAPNFGFGLGAAGRQAHVNNPTAMMLPPGRGY----HHLQPQPQLYQPQS 184

Query: 181 ----------SAHGGEFLQRLSAAKPGNGGIAADGFLMESAISS-QIPPAGASAD 189
                     +A G  FLQRLS+++P N G+ +DGFLME   SS Q+P   +S++
Sbjct: 185 QQYMFSLGSNNAPGDAFLQRLSSSRPPNAGV-SDGFLMEGVSSSFQVPRPSSSSN 234

[Close]

BLAST of Carg11411 vs. TrEMBL
Match: tr|A0A061DLC3|A0A061DLC3_THECC (Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_002034 PE=4 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 2.6e-21
Identity = 88/217 (40.55%), Postives = 102/217 (47.00%), Query Frame = 0


Query: 1   MSGPGDWLQFYHQNLPTTAAPPPSDQSTSEMIFADRVSDA---------------IASAN 60
           MSGP DW QFY QNL    AP      +SE  F D+ SDA               +AS  
Sbjct: 5   MSGPTDWAQFYQQNLSVQEAPNRGRVVSSESAFGDQGSDATVVTTTITSSSAPSPLASGP 64

Query: 61  TGASTG-LNPERRVAKXXXXXXXXXXXXXXTLLNTDTTNFRAMVQQFTGGPTPPF-ASSI 120
            G+S G L+PE RV+K              TLLNTDTTNFRAMVQQFTGGP+ PF   S 
Sbjct: 65  AGSSAGHLSPEGRVSKPLRRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPSAPFPGHSG 124

Query: 121 SPNFSLGFGA-IPQSNSG-LISPPSGYPLQFYHHNPQPFVIPA---------------SA 180
            PNF  GFG   P  N G L+ PP G+ LQ                              
Sbjct: 125 GPNFGFGFGGRQPHVNPGSLMIPPGGFHLQXXXXXXXXXXXXXXXXXXXXXXXXXSNNPG 184

Query: 181 HGGEFLQRLSAAKPGNGGIAADGFLMESAISSQIPPA 184
            G  FLQRL    P      +DGF++E A SSQ+PP+
Sbjct: 185 AGDLFLQRL-GGNPRPNMEGSDGFVVEGA-SSQVPPS 219

The following BLAST results are available for this feature:

BLAST of Carg11411 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022985096.1	3.2e-92	96.55	VQ motif-containing protein 22-like [Cucurbita maxima]	[more]
XP_023552946.1	3.5e-91	91.13	VQ motif-containing protein 22-like [Cucurbita pepo subsp. pepo]	[more]
XP_022931401.1	2.9e-85	87.68	VQ motif-containing protein 22-like [Cucurbita moschata]	[more]
XP_011653250.1	7.0e-63	67.00	PREDICTED: VQ motif-containing protein 22-like [Cucumis sativus]	[more]
XP_008451884.1	8.5e-61	67.01	PREDICTED: VQ motif-containing protein 22-like [Cucumis melo]	[more]

BLAST of Carg11411 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G15120.1	1.9e-06	74.55	VQ motif-containing protein	[more]
AT3G22160.1	1.2e-05	40.45	VQ motif-containing protein	[more]
AT5G65170.1	1.8e-04	43.64	VQ motif-containing protein	[more]
AT4G39720.1	4.0e-04	63.33	VQ motif-containing protein	[more]

BLAST of Carg11411 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9LIE6\|VQ22_ARATH	2.2e-04	40.45	VQ motif-containing protein 22 OS=Arabidopsis thaliana OX=3702 GN=VQ22 PE=2 SV=1	[more]

BLAST of Carg11411 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BTN7\|A0A1S3BTN7_CUCME	5.6e-61	67.01	VQ motif-containing protein 22-like OS=Cucumis melo OX=3656 GN=LOC103493042 PE=4...	[more]
tr\|A0A0A0KV74\|A0A0A0KV74_CUCSA	1.9e-56	63.96	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G056730 PE=4 SV=1	[more]
tr\|A0A2I4FG60\|A0A2I4FG60_9ROSI	1.0e-25	41.47	VQ motif-containing protein 22-like OS=Juglans regia OX=51240 GN=LOC108998517 PE...	[more]
tr\|A0A2I4F9H6\|A0A2I4F9H6_9ROSI	2.0e-21	37.45	VQ motif-containing protein 22-like OS=Juglans regia OX=51240 GN=LOC108996736 PE...	[more]
tr\|A0A061DLC3\|A0A061DLC3_THECC	2.6e-21	40.55	Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_002034 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR008889	VQ

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg11411-RA	Carg11411-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008889	VQ	PFAM	PF05678	VQ	coord: 71..98 e-value: 3.5E-10 score: 39.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 181..203
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 181..197
None	No IPR available	PANTHER	PTHR33179:SF7	VQ MOTIF-CONTAINING PROTEIN 22	coord: 38..140
None	No IPR available	PANTHER	PTHR33179	FAMILY NOT NAMED	coord: 38..140

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg11411	Cla005447	Watermelon (97103) v1	carwmB0652
Carg11411	Csa4G056730	Cucumber (Chinese Long) v2	carcuB0677
Carg11411	MELO3C016231	Melon (DHL92) v3.5.1	carmeB0653
Carg11411	ClCG07G010990	Watermelon (Charleston Gray)	carwcgB0637
Carg11411	CSPI04G07050	Wild cucumber (PI 183967)	carcpiB0687
Carg11411	Cucsa.180120	Cucumber (Gy14) v1	carcgyB0732
Carg11411	CmaCh04G006070	Cucurbita maxima (Rimu)	carcmaB0927
Carg11411	CmaCh16G004950	Cucurbita maxima (Rimu)	carcmaB0924
Carg11411	CmoCh04G006510	Cucurbita moschata (Rifu)	carcmoB0902
Carg11411	Lsi07G007880	Bottle gourd (USVL1VR-Ls)	carlsiB596
Carg11411	Cp4.1LG14g03000	Cucurbita pepo (Zucchini)	carcpeB0926
Carg11411	Cp4.1LG01g01160	Cucurbita pepo (Zucchini)	carcpeB0929
Carg11411	CsGy4G006970	Cucumber (Gy14) v2	carcgybB0652
Carg11411	MELO3C016231.2	Melon (DHL92) v3.6.1	carmedB0664
Carg11411	CsaV3_4G007280	Cucumber (Chinese Long) v3	carcucB0689
Carg11411	Cla97C07G137730	Watermelon (97103) v2	carwmbB0682
Carg11411	Bhi01G002369	Wax gourd	carwgoB0770

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg11411	Carg13137	Silver-seed gourd	carcarB050

The following block(s) are covering this gene:


Gene	Organism	Block
Carg11411	Silver-seed gourd	carcarB052
Carg11411	Cucurbita moschata (Rifu)	carcmoB0898
Carg11411	Melon (DHL92) v3.5.1	carmeB0652
Carg11411	Melon (DHL92) v3.6.1	carmedB0662