Cla97C07G137730 (gene) Watermelon (97103) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla97C07G137730
Type	gene
Organism	Citrullus lanatus (Watermelon (97103) v2)
Description	VQ motif-containing protein 22-like
Location	Cla97Chr07 : 25305180 .. 25305557 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTCAACAATTCACCGGCGGTCCAACTCCACCTTTCGCCTCATCGATTTCCCCCAATTTTTCGCTAGGGTACGGCGGGATTCGTCCATCGAATTTCGCAACTCCGCCGAACGCCGTGATTTCTCCGCCGTCTGGTTACCTATTACAACAACCACCACAGTTCTACAATCACAACCCTCAGCCGTTCGTGTTTCCGACAGCCGCACACGGCGGCGACTTTCTTCAGAGGCTGTCCGCGCCGAGGCCGGCTAATGGCGGAGTTGCCGGAGACGGATTTCTGATGGAAAGTGTGGTTGCTTCTCAAATTCCTCCCGCCGGAGCTTCTGCAGATTCCTCCAACGAGAACAATGGCGGGAACGGCCGCTTACTGTTCTGA

mRNA sequence

ATGGTTCAACAATTCACCGGCGGTCCAACTCCACCTTTCGCCTCATCGATTTCCCCCAATTTTTCGCTAGGGTACGGCGGGATTCGTCCATCGAATTTCGCAACTCCGCCGAACGCCGTGATTTCTCCGCCGTCTGGTTACCTATTACAACAACCACCACAGTTCTACAATCACAACCCTCAGCCGTTCGTGTTTCCGACAGCCGCACACGGCGGCGACTTTCTTCAGAGGCTGTCCGCGCCGAGGCCGGCTAATGGCGGAGTTGCCGGAGACGGATTTCTGATGGAAAGTGTGGTTGCTTCTCAAATTCCTCCCGCCGGAGCTTCTGCAGATTCCTCCAACGAGAACAATGGCGGGAACGGCCGCTTACTGTTCTGA

Coding sequence (CDS)

ATGGTTCAACAATTCACCGGCGGTCCAACTCCACCTTTCGCCTCATCGATTTCCCCCAATTTTTCGCTAGGGTACGGCGGGATTCGTCCATCGAATTTCGCAACTCCGCCGAACGCCGTGATTTCTCCGCCGTCTGGTTACCTATTACAACAACCACCACAGTTCTACAATCACAACCCTCAGCCGTTCGTGTTTCCGACAGCCGCACACGGCGGCGACTTTCTTCAGAGGCTGTCCGCGCCGAGGCCGGCTAATGGCGGAGTTGCCGGAGACGGATTTCTGATGGAAAGTGTGGTTGCTTCTCAAATTCCTCCCGCCGGAGCTTCTGCAGATTCCTCCAACGAGAACAATGGCGGGAACGGCCGCTTACTGTTCTGA

Protein sequence

MVQQFTGGPTPPFASSISPNFSLGYGGIRPSNFATPPNAVISPPSGYLLQQPPQFYNHNPQPFVFPTAAHGGDFLQRLSAPRPANGGVAGDGFLMESVVASQIPPAGASADSSNENNGGNGRLLF

Homology

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BLAST of Cla97C07G137730 vs. NCBI nr
Match: XP_008451884.1 (PREDICTED: VQ motif-containing protein 22-like [Cucumis melo])

HSP 1 Score: 228.0 bits (580), Expect = 1.7e-56
Identity = 112/126 (88.89%), Postives = 117/126 (92.86%), Query Frame = 0


Query: 1   MVQQFTGGPTPPFASSISPNFSLGYGGIRPSNFATPPNAVIS-PPSGYLLQQPPQFYNHN 60
           MVQQFTGGPTPPF SSISPNFSLG+GGIR SNF+T  NA IS PPSGYLLQQPPQ YNHN
Sbjct: 85  MVQQFTGGPTPPFTSSISPNFSLGFGGIRQSNFSTSQNAAISPPPSGYLLQQPPQLYNHN 144

Query: 61  PQPFVFPTAAHGGDFLQRLSAPRPANGGVAGDGFLMESVVASQIPPAGASADSSNENNGG 120
           PQPFVFPT AHGGDFLQRLSAPRPANGGVAGDGFL+ES V+SQIPPAGASADSSNE+NGG
Sbjct: 145 PQPFVFPTVAHGGDFLQRLSAPRPANGGVAGDGFLIESAVSSQIPPAGASADSSNESNGG 204

Query: 121 NGRLLF 126
           NGRLLF
Sbjct: 205 NGRLLF 210

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BLAST of Cla97C07G137730 vs. NCBI nr
Match: XP_011653250.1 (PREDICTED: VQ motif-containing protein 22-like [Cucumis sativus])

HSP 1 Score: 218.8 bits (556), Expect = 1.1e-53
Identity = 108/126 (85.71%), Postives = 113/126 (89.68%), Query Frame = 0


Query: 1   MVQQFTGGPTPPFASSISPNFSLGYGGIRPSNFATPPNAVIS-PPSGYLLQQPPQFYNHN 60
           MVQQFTGGPTPPF SSISPNFSLG+GGI  SNF T  NA IS PPSGYLLQQPPQ YNHN
Sbjct: 91  MVQQFTGGPTPPFTSSISPNFSLGFGGIHQSNFPTSQNATISPPPSGYLLQQPPQLYNHN 150

Query: 61  PQPFVFPTAAHGGDFLQRLSAPRPANGGVAGDGFLMESVVASQIPPAGASADSSNENNGG 120
           PQ F+FPT AHGGDFLQRLSAPRPANG VAGDGFL+ES V+SQIPPAGASADSSNE+NGG
Sbjct: 151 PQQFMFPTVAHGGDFLQRLSAPRPANGAVAGDGFLIESAVSSQIPPAGASADSSNESNGG 210

Query: 121 NGRLLF 126
           NGRLLF
Sbjct: 211 NGRLLF 216

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BLAST of Cla97C07G137730 vs. NCBI nr
Match: XP_022136425.1 (VQ motif-containing protein 22-like [Momordica charantia])

HSP 1 Score: 183.0 bits (463), Expect = 6.4e-43
Identity = 96/131 (73.28%), Postives = 103/131 (78.63%), Query Frame = 0


Query: 1   MVQQFTGGPTPPFASSIS-----PNFSLGYGGIRPSNFATPPNAVISPPSGYLLQQPPQF 60
           MVQQFTGGPTPPFASSIS     PNFSLG+GGIR SNF   PN  +SPP    LQQ PQF
Sbjct: 102 MVQQFTGGPTPPFASSISHHGGAPNFSLGFGGIRQSNFGNLPNVGMSPPPSGYLQQQPQF 161

Query: 61  YNHN-PQPFVFPTAAHGGDFLQRLSAPRPANGGVAGDGFLMESVVASQIPPAGASADSSN 120
           Y+ N P+PF+FP  AHGGDFLQRLSA RPANGGV  DGFLMES V+SQIP AG SADSSN
Sbjct: 162 YHQNHPEPFMFPAGAHGGDFLQRLSATRPANGGVVVDGFLMESAVSSQIPSAGGSADSSN 221

Query: 121 ENNGGNGRLLF 126
           E+N GNG LLF
Sbjct: 222 ESNDGNGGLLF 232

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BLAST of Cla97C07G137730 vs. NCBI nr
Match: XP_022982664.1 (VQ motif-containing protein 22-like [Cucurbita maxima])

HSP 1 Score: 181.4 bits (459), Expect = 1.9e-42
Identity = 94/125 (75.20%), Postives = 101/125 (80.80%), Query Frame = 0


Query: 1   MVQQFTGGPTPPFASSISPNFSLGYGGIRPSNFATPPNAVISPPSGYLLQQPPQFYNHNP 60
           MVQQFTGGPT   ASSISPNF LG+ GI  SNF TPPNAVISPPS YL  Q PQFY+ +P
Sbjct: 96  MVQQFTGGPTSSSASSISPNFPLGFRGICQSNFGTPPNAVISPPSDYL--QLPQFYHSHP 155

Query: 61  QPFVFPTAAHGGDFLQRLSAPRPANGGVAGDGFLMESVVASQIPPAGASADSSNENNGGN 120
           QPF+FP AAHGGDFLQR+S  RPAN GVAGDGFLMES V+SQIP  GASADSSN+ N GN
Sbjct: 156 QPFMFPAAAHGGDFLQRISVARPANDGVAGDGFLMESAVSSQIPTTGASADSSNKTNHGN 215

Query: 121 GRLLF 126
           G  LF
Sbjct: 216 GASLF 218

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BLAST of Cla97C07G137730 vs. NCBI nr
Match: XP_023552946.1 (VQ motif-containing protein 22-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 173.3 bits (438), Expect = 5.1e-40
Identity = 88/121 (72.73%), Postives = 100/121 (82.64%), Query Frame = 0


Query: 1   MVQQFTGGPTPPFASSISPNFSLGYGGIRPSNFATPPNAVISPPSGYLLQQPPQFYNHNP 60
           MVQQFTGGPTPPFASSISPNFSLG+G I  SN     + +ISPPSGY    P QFY+HNP
Sbjct: 87  MVQQFTGGPTPPFASSISPNFSLGFGAIPQSN-----SGMISPPSGY----PLQFYHHNP 146

Query: 61  QPFVFPTAAHGGDFLQRLSAPRPANGGVAGDGFLMESVVASQIPPAGASADSSNENNGGN 120
           QPFV P +AHGG+FLQRLSA +P NGGVA DGFLMES V+SQIPP GA+ADSSN++NGG+
Sbjct: 147 QPFVIPASAHGGEFLQRLSAAKPGNGGVAADGFLMESAVSSQIPPTGATADSSNKSNGGS 198

Query: 121 G 122
           G
Sbjct: 207 G 198

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BLAST of Cla97C07G137730 vs. TrEMBL
Match: tr|A0A1S3BTN7|A0A1S3BTN7_CUCME (VQ motif-containing protein 22-like OS=Cucumis melo OX=3656 GN=LOC103493042 PE=4 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 1.2e-56
Identity = 112/126 (88.89%), Postives = 117/126 (92.86%), Query Frame = 0


Query: 1   MVQQFTGGPTPPFASSISPNFSLGYGGIRPSNFATPPNAVIS-PPSGYLLQQPPQFYNHN 60
           MVQQFTGGPTPPF SSISPNFSLG+GGIR SNF+T  NA IS PPSGYLLQQPPQ YNHN
Sbjct: 85  MVQQFTGGPTPPFTSSISPNFSLGFGGIRQSNFSTSQNAAISPPPSGYLLQQPPQLYNHN 144

Query: 61  PQPFVFPTAAHGGDFLQRLSAPRPANGGVAGDGFLMESVVASQIPPAGASADSSNENNGG 120
           PQPFVFPT AHGGDFLQRLSAPRPANGGVAGDGFL+ES V+SQIPPAGASADSSNE+NGG
Sbjct: 145 PQPFVFPTVAHGGDFLQRLSAPRPANGGVAGDGFLIESAVSSQIPPAGASADSSNESNGG 204

Query: 121 NGRLLF 126
           NGRLLF
Sbjct: 205 NGRLLF 210

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BLAST of Cla97C07G137730 vs. TrEMBL
Match: tr|A0A0A0KV74|A0A0A0KV74_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G056730 PE=4 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 9.8e-40
Identity = 87/119 (73.11%), Postives = 93/119 (78.15%), Query Frame = 0


Query: 1   MVQQFTGGPTPPFASSISPNFSLGYGGIRPSNFATPPNAVIS-PPSGYLLQQPPQFYNHN 60
           MVQQFTGGPTPPF SSISPNFSLG+GGI  SNF T  NA IS PPSGYLLQQPPQ YNHN
Sbjct: 91  MVQQFTGGPTPPFTSSISPNFSLGFGGIHQSNFPTSQNATISPPPSGYLLQQPPQLYNHN 150

Query: 61  PQPFVFPTAAHGGDFLQRLSAPRPANGGVAGDGFLMESVVASQIPPAGASADSSNENNG 119
           PQ F+FPT AHGGDFLQRLSAPRPANG VAGDGFL+ES +         +A  S+E  G
Sbjct: 151 PQQFMFPTVAHGGDFLQRLSAPRPANGAVAGDGFLIESAIPPTRAMGVMAAYCSDEEEG 209

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BLAST of Cla97C07G137730 vs. TrEMBL
Match: tr|A0A2I4FG60|A0A2I4FG60_9ROSI (VQ motif-containing protein 22-like OS=Juglans regia OX=51240 GN=LOC108998517 PE=4 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 4.6e-13
Identity = 53/123 (43.09%), Postives = 68/123 (55.28%), Query Frame = 0


Query: 1   MVQQFTGGPTPPFASSI---SPNFSLGYGGIRPSNFATPPNAVISPPSGYLLQQPPQFYN 60
           MVQQFTGGPT PFAS     +PNF  G G  +  +   P   ++ P  GY LQ  PQ Y+
Sbjct: 102 MVQQFTGGPTAPFASGAHAGAPNFGFGLGTHQAGHVNNPTAMMMPPGRGYHLQPQPQLYH 161

Query: 61  HNPQPFVFP----TAAHGGDFLQRLSAPRPANGGVAGDGFLMESVVASQIPPAGASADSS 117
              Q ++F      A  G  FLQRL + RP + GV+ DGF+ME V +S   P+     SS
Sbjct: 162 PQSQQYLFSLGSNNAQAGDPFLQRLGSSRPRSIGVS-DGFVMEGVSSSSQVPSARPPGSS 221

[Close]

BLAST of Cla97C07G137730 vs. TrEMBL
Match: tr|A0A2I4F9H6|A0A2I4F9H6_9ROSI (VQ motif-containing protein 22-like OS=Juglans regia OX=51240 GN=LOC108996736 PE=4 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 1.9e-11
Identity = 55/126 (43.65%), Postives = 69/126 (54.76%), Query Frame = 0


Query: 1   MVQQFTGGPTPPFASS----ISPNFSLGYGGIRPSNFATPPNAVISPPS-GY-LLQQPPQ 60
           MVQQFTGGP+  FAS+     +PNF  G G          P A++ PP  GY  LQ  PQ
Sbjct: 115 MVQQFTGGPSATFASAGAHPGAPNFGFGLGAAGRQAHVNNPTAMMLPPGRGYHHLQPQPQ 174

Query: 61  FYNHNPQPFVFPTA---AHGGDFLQRLSAPRPANGGVAGDGFLMESVVASQIPPAGASAD 118
            Y    Q ++F      A G  FLQRLS+ RP N GV+ DGFLME V +S   P  +S+ 
Sbjct: 175 LYQPQSQQYMFSLGSNNAPGDAFLQRLSSSRPPNAGVS-DGFLMEGVSSSFQVPRPSSSS 234

[Close]

BLAST of Cla97C07G137730 vs. TrEMBL
Match: tr|A0A2N9EXQ9|A0A2N9EXQ9_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS7507 PE=4 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 5.4e-06
Identity = 51/136 (37.50%), Postives = 67/136 (49.26%), Query Frame = 0


Query: 1   MVQQFTGGPTPPFASSI---SPNFSLGYGGIRPSNFATPPNAVISPPS----GYLLQ-QP 60
           MVQQFTGGP+ PFAS     +PNF    G  R       P A++ PP+    GY LQ   
Sbjct: 95  MVQQFTGGPSAPFASGPHPGAPNFGFALGAGR------SPTAMMLPPAAAHHGYHLQPHQ 154

Query: 61  PQFYNHNPQPFVFPTAAHGGD-----FLQRLSAPRPANGGVAGDGFLMES---VVASQIP 120
            Q Y    Q ++F    +         LQRL + RP N G++ DGF+ME      +SQ+ 
Sbjct: 155 QQLYPQQGQQYMFSLGNNSNTPVDHALLQRLGSSRPTNMGLS-DGFVMEGGGVQSSSQVL 214

The following BLAST results are available for this feature:

BLAST of Cla97C07G137730 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008451884.1	1.7e-56	88.89	PREDICTED: VQ motif-containing protein 22-like [Cucumis melo]	[more]
XP_011653250.1	1.1e-53	85.71	PREDICTED: VQ motif-containing protein 22-like [Cucumis sativus]	[more]
XP_022136425.1	6.4e-43	73.28	VQ motif-containing protein 22-like [Momordica charantia]	[more]
XP_022982664.1	1.9e-42	75.20	VQ motif-containing protein 22-like [Cucurbita maxima]	[more]
XP_023552946.1	5.1e-40	72.73	VQ motif-containing protein 22-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Cla97C07G137730 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BTN7\|A0A1S3BTN7_CUCME	1.2e-56	88.89	VQ motif-containing protein 22-like OS=Cucumis melo OX=3656 GN=LOC103493042 PE=4...	[more]
tr\|A0A0A0KV74\|A0A0A0KV74_CUCSA	9.8e-40	73.11	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G056730 PE=4 SV=1	[more]
tr\|A0A2I4FG60\|A0A2I4FG60_9ROSI	4.6e-13	43.09	VQ motif-containing protein 22-like OS=Juglans regia OX=51240 GN=LOC108998517 PE...	[more]
tr\|A0A2I4F9H6\|A0A2I4F9H6_9ROSI	1.9e-11	43.65	VQ motif-containing protein 22-like OS=Juglans regia OX=51240 GN=LOC108996736 PE...	[more]
tr\|A0A2N9EXQ9\|A0A2N9EXQ9_FAGSY	5.4e-06	37.50	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS7507 PE=4 SV=1	[more]

BLAST of Cla97C07G137730 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Cla97C07G137730 vs. TAIR10


Match Name	E-value	Identity	Description

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0006260	DNA replication
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0005515	protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C07G137730.1	Cla97C07G137730.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 106..125
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 104..125

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla97C07G137730	Cla005447	Watermelon (97103) v1	wmwmbB168
Cla97C07G137730	Csa4G056730	Cucumber (Chinese Long) v2	cuwmbB321
Cla97C07G137730	MELO3C016231	Melon (DHL92) v3.5.1	mewmbB500
Cla97C07G137730	ClCG07G010990	Watermelon (Charleston Gray)	wcgwmbB307
Cla97C07G137730	CSPI04G07050	Wild cucumber (PI 183967)	cpiwmbB331
Cla97C07G137730	Cucsa.180120	Cucumber (Gy14) v1	cgywmbB324
Cla97C07G137730	CmaCh16G004950	Cucurbita maxima (Rimu)	cmawmbB350
Cla97C07G137730	CmaCh04G006070	Cucurbita maxima (Rimu)	cmawmbB782
Cla97C07G137730	CmoCh04G006510	Cucurbita moschata (Rifu)	cmowmbB756
Cla97C07G137730	Lsi07G007880	Bottle gourd (USVL1VR-Ls)	lsiwmbB411
Cla97C07G137730	CsGy4G006970	Cucumber (Gy14) v2	cgybwmbB304
Cla97C07G137730	MELO3C016231.2	Melon (DHL92) v3.6.1	medwmbB493
Cla97C07G137730	Carg13137	Silver-seed gourd	carwmbB0043
Cla97C07G137730	Carg11411	Silver-seed gourd	carwmbB0682
Cla97C07G137730	CsaV3_4G007280	Cucumber (Chinese Long) v3	cucwmbB329
Cla97C07G137730	Bhi01G002369	Wax gourd	wgowmbB219

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla97C07G137730	Cucurbita moschata (Rifu)	cmowmbB335
Cla97C07G137730	Melon (DHL92) v3.6.1	medwmbB484
Cla97C07G137730	Melon (DHL92) v3.5.1	mewmbB491