CmoCh17G010760 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh17G010760
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionTSPO(Outer membrane tryptophan-rich sensory protein)-related
LocationCmo_Chr17 : 8944187 .. 8944753 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTTCCACCGAGCTTAAGCACCGAACAACAGGCGACTCCCCCGCCGTCCCAGCCGCCGCCGACGAGGTTAGCGCGAAGAGAGAGAAGAACAAGGCTATCGCCAAACGAGGCCTGAAGTCTCTAGCTGTGGCAGTCTCCATCCCCATCGCCGTCACTCTCCTCTCCATCCTCCTCCTTGCCAGACCCAAAAACTACTACCCCTCCGCCACGAAGCCCTTCTGGGTTCCATCGGCAAGGGTCGTGAACTGGGGGTCGTTGGCTTCTAGCTTGTTGATGGGCATCTCGAGCTGGCTGTTCTGGGCTGAAGGCGGGTTCCAAGCTAGGCCCAACGCGCTGTATCTTTACACTTTGTACTTGGTGCTGTGCATGGCGTGGCACGGCCTCGTGCTTGGAGCCGGGTCGCGATGGCTAGGCTCCGTGGCGTGTTTGGGGAAGACGGCGACGCTGGTTGGGTGTGACCGGTTGTTCCGAGGAGTGAACGCGATTGCGGCGGACTTGGTTAGGCCTTGTTTGGTTTGGTCTGTTTTTCTTACTATCGTGAGTCTTACAATGGTTTCTGTTTGA

mRNA sequence

ATGGCTTCCACCGAGCTTAAGCACCGAACAACAGGCGACTCCCCCGCCGTCCCAGCCGCCGCCGACGAGGTTAGCGCGAAGAGAGAGAAGAACAAGGCTATCGCCAAACGAGGCCTGAAGTCTCTAGCTGTGGCAGTCTCCATCCCCATCGCCGTCACTCTCCTCTCCATCCTCCTCCTTGCCAGACCCAAAAACTACTACCCCTCCGCCACGAAGCCCTTCTGGGTTCCATCGGCAAGGGTCGTGAACTGGGGGTCGTTGGCTTCTAGCTTGTTGATGGGCATCTCGAGCTGGCTGTTCTGGGCTGAAGGCGGGTTCCAAGCTAGGCCCAACGCGCTGTATCTTTACACTTTGTACTTGGTGCTGTGCATGGCGTGGCACGGCCTCGTGCTTGGAGCCGGGTCGCGATGGCTAGGCTCCGTGGCGTGTTTGGGGAAGACGGCGACGCTGGTTGGGTGTGACCGGTTGTTCCGAGGAGTGAACGCGATTGCGGCGGACTTGGTTAGGCCTTGTTTGGTTTGGTCTGTTTTTCTTACTATCGTGAGTCTTACAATGGTTTCTGTTTGA

Coding sequence (CDS)

ATGGCTTCCACCGAGCTTAAGCACCGAACAACAGGCGACTCCCCCGCCGTCCCAGCCGCCGCCGACGAGGTTAGCGCGAAGAGAGAGAAGAACAAGGCTATCGCCAAACGAGGCCTGAAGTCTCTAGCTGTGGCAGTCTCCATCCCCATCGCCGTCACTCTCCTCTCCATCCTCCTCCTTGCCAGACCCAAAAACTACTACCCCTCCGCCACGAAGCCCTTCTGGGTTCCATCGGCAAGGGTCGTGAACTGGGGGTCGTTGGCTTCTAGCTTGTTGATGGGCATCTCGAGCTGGCTGTTCTGGGCTGAAGGCGGGTTCCAAGCTAGGCCCAACGCGCTGTATCTTTACACTTTGTACTTGGTGCTGTGCATGGCGTGGCACGGCCTCGTGCTTGGAGCCGGGTCGCGATGGCTAGGCTCCGTGGCGTGTTTGGGGAAGACGGCGACGCTGGTTGGGTGTGACCGGTTGTTCCGAGGAGTGAACGCGATTGCGGCGGACTTGGTTAGGCCTTGTTTGGTTTGGTCTGTTTTTCTTACTATCGTGAGTCTTACAATGGTTTCTGTTTGA
Homology
[Close]
BLAST of CmoCh17G010760 vs. Swiss-Prot
Match: TSPO_ARATH (Translocator protein homolog OS=Arabidopsis thaliana GN=TSPO PE=1 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 1.7e-30
Identity = 73/193 (37.82%), Postives = 110/193 (56.99%), Query Frame = 1 

Query: 1   MASTELKHRTTGDSPAVPAA--------ADEVSAKREKNKAIAKRGLKSLAVAVSIPIAV 60
           M S ++++R   D  A   A        AD+   KR++ +A+AKRGLKSL VAV+ P+ V
Sbjct: 1   MDSQDIRYRGGDDRDAATTAMAETERKSADDNKGKRDQKRAMAKRGLKSLTVAVAAPVLV 60

Query: 61  TLLSILLLARPKNYYPSATKPFWVPSARVVNWGSLASSLLMGISSWLFWAEGGFQARPNA 120
           TL +   L     Y   A    W+P   +++   LASS LMG+++WL W +GGF  +PNA
Sbjct: 61  TLFATYFLGTSDGYGNRAKSSSWIPPLWLLHTTCLASSGLMGLAAWLVWVDGGFHKKPNA 120

Query: 121 LYLYTLYLVLCMAWHGLVLGAGSRWLGSVACLGKTATLVGCDRLFRGVNAIAADLVRPCL 180
           LYLY    +LC+ W  +    GS   G    LG++A L GC + F  ++ +A +LV+PCL
Sbjct: 121 LYLYLAQFLLCLVWDPVTFRVGSGVAGLAVWLGQSAALFGCYKAFNEISPVAGNLVKPCL 180

Query: 181 VWSVFLTIVSLTM 186
            W+ F+  V++ +
Sbjct: 181 AWAAFVAAVNVKL 193

[Close]
BLAST of CmoCh17G010760 vs. TrEMBL
Match: A0A0A0KAU9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G396370 PE=4 SV=1)

HSP 1 Score: 255.0 bits (650), Expect = 7.2e-65
Identity = 130/191 (68.06%), Postives = 157/191 (82.20%), Query Frame = 1 

Query: 1   MASTELKHRTTGDSP--AVPAAADEVSAKREKNKAIAKRGLKSLAVAVSIPIAVTLLSIL 60
           MAST+LKHR T DS   +  +A D    K+ KNK IAKRGL+SLA+A+SIP+++TL  IL
Sbjct: 1   MASTDLKHRKTDDSTPTSTVSADDNDGTKKSKNKVIAKRGLRSLALAISIPVSLTLFFIL 60

Query: 61  LLARPKNYYP-SATKPFWVPSARVVNWGSLASSLLMGISSWLFWAEGGFQARPNALYLYT 120
           L +  KNYYP SA KPFWVPSA+VVNWGSL SSLLMG+++WL WAEGGF ARPNALYLY 
Sbjct: 61  LFSNSKNYYPASAPKPFWVPSAKVVNWGSLTSSLLMGVAAWLVWAEGGFHARPNALYLYG 120

Query: 121 LYLVLCMAWHGLVLGAGSRWLGSVACLGKTATLVGCDRLFRGVNAIAADLVRPCLVWSVF 180
           LY VLC+ W+ L+ GAG+R L ++ACLGKTA LVGCDRLFRGVN +AADLV+PCLVWSV 
Sbjct: 121 LYSVLCLTWYALMFGAGARRLSALACLGKTAALVGCDRLFRGVNPLAADLVKPCLVWSVL 180

Query: 181 LTIVSLTMVSV 189
           LT+V+LT+VS+
Sbjct: 181 LTVVNLTVVSL 191

[Close]
BLAST of CmoCh17G010760 vs. TrEMBL
Match: A0A0D2SYA6_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G011200 PE=4 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 5.9e-35
Identity = 88/188 (46.81%), Postives = 114/188 (60.64%), Query Frame = 1 

Query: 1   MASTELKHRTTGDSPAVPAAADEVSA--KREKNKAIAKRGLKSLAVAVSIPIAVTLLSIL 60
           M S  LKHR+  D       ++E +   +REK  A+AKRGL+SL +AVS P+++TLL+I 
Sbjct: 1   MESQNLKHRSRDDPRFTTTTSNEKNRANRREKRMAMAKRGLRSLVIAVSFPLSLTLLNIY 60

Query: 61  LLARPKNYYPSATKPFWVPSARVVNWGSLASSLLMGISSWLFWAEGGFQARPNALYLYTL 120
           L    + Y  S  KPFW P   +++ G LASS +MG+S+W  W EGGF  +P AL LY  
Sbjct: 61  LFGSGRGY-ASLAKPFWFPPLWLLHTGCLASSFVMGLSAWFVWVEGGFHVKPTALSLYLG 120

Query: 121 YLVLCMAWHGLVLGAGSRWLGSVACLGKTATLVGCDRLFRGVNAIAADLVRPCLVWSVFL 180
           YL L MAWH  VL  G+ W G +  L    TLVGC R F  VN IA + V PCL W+ FL
Sbjct: 121 YLGLSMAWHPTVLWMGASWAGLLVSLAMVGTLVGCSRDFGKVNPIAGNSVMPCLAWAAFL 180

Query: 181 TIVSLTMV 187
             V+L +V
Sbjct: 181 ATVNLKLV 187

[Close]
BLAST of CmoCh17G010760 vs. TrEMBL
Match: A0A061DQD9_THECC (TSPO(Outer membrane tryptophan-rich sensory protein)-related OS=Theobroma cacao GN=TCM_004622 PE=4 SV=1)

HSP 1 Score: 153.7 bits (387), Expect = 2.3e-34
Identity = 89/195 (45.64%), Postives = 118/195 (60.51%), Query Frame = 1 

Query: 1   MASTELKHRTTGDSPAVPAAADEV---------SAKREKNKAIAKRGLKSLAVAVSIPIA 60
           M S  LK R   D P +    ++          +++REK   +AKRGL+SLAVAVS+P++
Sbjct: 1   MESQTLKQRFRDDDPRITTTTNDKDNNKNEKNRTSRREKRMGMAKRGLRSLAVAVSLPLS 60

Query: 61  VTLLSILLLARPKNYYPSATKPFWVPSARVVNWGSLASSLLMGISSWLFWAEGGFQARPN 120
           +TLL+I L      Y  +  KPFW P   +++   +ASS LMG+S+WL WAEGGF ARP 
Sbjct: 61  LTLLNIYLFGSGHGY-GALPKPFWFPPLWLIHITCMASSFLMGLSAWLVWAEGGFHARPR 120

Query: 121 ALYLYTLYLVLCMAWHGLVLGAGSRWLGSVACLGKTATLVGCDRLFRGVNAIAADLVRPC 180
           AL L+   L L +AW  +V   G+ W+G V  L     LVGC R FR VN IA DLV+PC
Sbjct: 121 ALSLFMAQLGLSLAWLPIVFWVGASWVGLVVRLAVFGALVGCSRDFREVNPIAGDLVKPC 180

Query: 181 LVWSVFLTIVSLTMV 187
           L W+ FL IV+L +V
Sbjct: 181 LAWAAFLAIVNLKLV 194

[Close]
BLAST of CmoCh17G010760 vs. TrEMBL
Match: A0A067JW57_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13908 PE=4 SV=1)

HSP 1 Score: 153.7 bits (387), Expect = 2.3e-34
Identity = 81/187 (43.32%), Postives = 117/187 (62.57%), Query Frame = 1 

Query: 1   MASTELKHRTT-GDSPAVPAAADEVSAKREKNKAIAKRGLKSLAVAVSIPIAVTLLSILL 60
           M S  + HRT   D PA   A  ++  +++K  A+AKRG++SLA+AV++P+++TL +   
Sbjct: 1   MDSQNITHRTRDADEPATATANRDMKTRQDKRMAMAKRGIRSLAIAVALPLSLTLFNFYF 60

Query: 61  LARPKNYYPSATKPFWVPSARVVNWGSLASSLLMGISSWLFWAEGGFQARPNALYLYTLY 120
                N Y  A+KP W P    +++ S  S+ LMG+S+WL WAEGGF  +P A+ LY   
Sbjct: 61  FGS-SNGYGIASKPSWFPPIWALHFFSFVSTFLMGLSAWLVWAEGGFHKKPRAISLYLAQ 120

Query: 121 LVLCMAWHGLVLGAGSRWLGSVACLGKTATLVGCDRLFRGVNAIAADLVRPCLVWSVFLT 180
           L L +AW  +V   G+ W+G +ACL     +VGC R F+ VN IA DLV+PCL W+ FL 
Sbjct: 121 LGLGLAWDPIVFRMGATWVGLLACLAMFGAIVGCSRQFKEVNPIAGDLVKPCLAWAAFLA 180

Query: 181 IVSLTMV 187
           IV+L +V
Sbjct: 181 IVNLKLV 186

[Close]
BLAST of CmoCh17G010760 vs. TrEMBL
Match: I0B680_GOSHI (Putative peripheral-type benzodiazepine receptor OS=Gossypium hirsutum PE=2 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 2.9e-34
Identity = 89/188 (47.34%), Postives = 114/188 (60.64%), Query Frame = 1 

Query: 1   MASTELKHRTTGDSPAVPAAADEVSA--KREKNKAIAKRGLKSLAVAVSIPIAVTLLSIL 60
           M S  LKHR+  D       ++E +   +REK  A+AKRGL+SL +AVS P+++TLL+I 
Sbjct: 1   MESQNLKHRSRDDPRFTTTTSNEKNRANRREKRMAMAKRGLRSLVIAVSFPLSLTLLNIY 60

Query: 61  LLARPKNYYPSATKPFWVPSARVVNWGSLASSLLMGISSWLFWAEGGFQARPNALYLYTL 120
           L    + Y  S  KPFW P   +++ G LASS LMG+S+W  W EGGF  +P AL LY  
Sbjct: 61  LFGSGRGY-ASLAKPFWFPPLWLLHTGCLASSFLMGLSAWFVWVEGGFHVKPTALSLYLG 120

Query: 121 YLVLCMAWHGLVLGAGSRWLGSVACLGKTATLVGCDRLFRGVNAIAADLVRPCLVWSVFL 180
           YL L MAWH  VL  G+   G +  L    TLVGC R FR VN IA + V PCL W+ FL
Sbjct: 121 YLGLSMAWHPTVLWMGASRAGLLVNLAMVGTLVGCSRDFRKVNPIAGNSVMPCLAWAAFL 180

Query: 181 TIVSLTMV 187
             V+L +V
Sbjct: 181 ATVNLKLV 187

[Close]
BLAST of CmoCh17G010760 vs. TAIR10
Match: AT2G47770.1 (AT2G47770.1 TSPO(outer membrane tryptophan-rich sensory protein)-related)

HSP 1 Score: 134.0 bits (336), Expect = 9.4e-32
Identity = 73/193 (37.82%), Postives = 110/193 (56.99%), Query Frame = 1 

Query: 1   MASTELKHRTTGDSPAVPAA--------ADEVSAKREKNKAIAKRGLKSLAVAVSIPIAV 60
           M S ++++R   D  A   A        AD+   KR++ +A+AKRGLKSL VAV+ P+ V
Sbjct: 1   MDSQDIRYRGGDDRDAATTAMAETERKSADDNKGKRDQKRAMAKRGLKSLTVAVAAPVLV 60

Query: 61  TLLSILLLARPKNYYPSATKPFWVPSARVVNWGSLASSLLMGISSWLFWAEGGFQARPNA 120
           TL +   L     Y   A    W+P   +++   LASS LMG+++WL W +GGF  +PNA
Sbjct: 61  TLFATYFLGTSDGYGNRAKSSSWIPPLWLLHTTCLASSGLMGLAAWLVWVDGGFHKKPNA 120

Query: 121 LYLYTLYLVLCMAWHGLVLGAGSRWLGSVACLGKTATLVGCDRLFRGVNAIAADLVRPCL 180
           LYLY    +LC+ W  +    GS   G    LG++A L GC + F  ++ +A +LV+PCL
Sbjct: 121 LYLYLAQFLLCLVWDPVTFRVGSGVAGLAVWLGQSAALFGCYKAFNEISPVAGNLVKPCL 180

Query: 181 VWSVFLTIVSLTM 186
            W+ F+  V++ +
Sbjct: 181 AWAAFVAAVNVKL 193

[Close]
BLAST of CmoCh17G010760 vs. NCBI nr
Match: gi|659101426|ref|XP_008451600.1| (PREDICTED: translocator protein homolog [Cucumis melo])

HSP 1 Score: 255.4 bits (651), Expect = 7.9e-65
Identity = 130/191 (68.06%), Postives = 156/191 (81.68%), Query Frame = 1 

Query: 1   MASTELKHRTTGDSPAVPAAADEVS--AKREKNKAIAKRGLKSLAVAVSIPIAVTLLSIL 60
           MAST+LKHR T DS        +V+   K+ +NK IAKRGL+SLA+A+SIP+++TLL I 
Sbjct: 1   MASTDLKHRKTDDSTPTSTVTADVNDGTKKARNKVIAKRGLRSLALAISIPVSLTLLFIF 60

Query: 61  LLARPKNYYP-SATKPFWVPSARVVNWGSLASSLLMGISSWLFWAEGGFQARPNALYLYT 120
           L +  KNYYP SA +PFWVPS +VVNWGSL SSLLMG+++WL WAEGGF +RPNALYLY 
Sbjct: 61  LFSNSKNYYPASAGRPFWVPSTKVVNWGSLTSSLLMGVAAWLVWAEGGFHSRPNALYLYG 120

Query: 121 LYLVLCMAWHGLVLGAGSRWLGSVACLGKTATLVGCDRLFRGVNAIAADLVRPCLVWSVF 180
           LYLVLC+AW+ LV GAG+R L S+ACLGKTA LVGCDRLFRGVN IAADLV+PCLVWSV 
Sbjct: 121 LYLVLCLAWYALVFGAGARRLSSLACLGKTAALVGCDRLFRGVNPIAADLVKPCLVWSVL 180

Query: 181 LTIVSLTMVSV 189
           LT+V+LTM S+
Sbjct: 181 LTVVNLTMASL 191

[Close]
BLAST of CmoCh17G010760 vs. NCBI nr
Match: gi|449436787|ref|XP_004136174.1| (PREDICTED: translocator protein homolog [Cucumis sativus])

HSP 1 Score: 255.0 bits (650), Expect = 1.0e-64
Identity = 130/191 (68.06%), Postives = 157/191 (82.20%), Query Frame = 1 

Query: 1   MASTELKHRTTGDSP--AVPAAADEVSAKREKNKAIAKRGLKSLAVAVSIPIAVTLLSIL 60
           MAST+LKHR T DS   +  +A D    K+ KNK IAKRGL+SLA+A+SIP+++TL  IL
Sbjct: 1   MASTDLKHRKTDDSTPTSTVSADDNDGTKKSKNKVIAKRGLRSLALAISIPVSLTLFFIL 60

Query: 61  LLARPKNYYP-SATKPFWVPSARVVNWGSLASSLLMGISSWLFWAEGGFQARPNALYLYT 120
           L +  KNYYP SA KPFWVPSA+VVNWGSL SSLLMG+++WL WAEGGF ARPNALYLY 
Sbjct: 61  LFSNSKNYYPASAPKPFWVPSAKVVNWGSLTSSLLMGVAAWLVWAEGGFHARPNALYLYG 120

Query: 121 LYLVLCMAWHGLVLGAGSRWLGSVACLGKTATLVGCDRLFRGVNAIAADLVRPCLVWSVF 180
           LY VLC+ W+ L+ GAG+R L ++ACLGKTA LVGCDRLFRGVN +AADLV+PCLVWSV 
Sbjct: 121 LYSVLCLTWYALMFGAGARRLSALACLGKTAALVGCDRLFRGVNPLAADLVKPCLVWSVL 180

Query: 181 LTIVSLTMVSV 189
           LT+V+LT+VS+
Sbjct: 181 LTVVNLTVVSL 191

[Close]
BLAST of CmoCh17G010760 vs. NCBI nr
Match: gi|470108978|ref|XP_004290779.1| (PREDICTED: translocator protein homolog [Fragaria vesca subsp. vesca])

HSP 1 Score: 157.5 bits (397), Expect = 2.2e-35
Identity = 86/186 (46.24%), Postives = 115/186 (61.83%), Query Frame = 1 

Query: 1   MASTELKHRTTGDSPAVPAAADEVSAKREKNKAIAKRGLKSLAVAVSIPIAVTLLSILLL 60
           M S  LK R   D P      +  + K E    +AKRGL+SLA+AVS+P+A+ L++I L 
Sbjct: 1   MDSQNLKQRRVADDPNTTMNKNNYAGKPEMRMKMAKRGLRSLAIAVSLPVALHLITIYLA 60

Query: 61  ARPKNYYPSATKPFWVPSARVVNWGSLASSLLMGISSWLFWAEGGFQARPNALYLYTLYL 120
           +     Y +A+KPFW P    +    LASS LMG+S+WL WAEGGF   P AL LY   L
Sbjct: 61  STDS--YRTASKPFWFPPMWGLRLTCLASSFLMGLSAWLVWAEGGFHKNPMALPLYLSQL 120

Query: 121 VLCMAWHGLVLGAGSRWLGSVACLGKTATLVGCDRLFRGVNAIAADLVRPCLVWSVFLTI 180
           VL +AW  +V GAG+ W+G V C+G    LVGC ++F+ VNA A  L++PCL W  FL +
Sbjct: 121 VLSLAWDPIVFGAGAPWVGLVVCMGMFGALVGCSKVFQDVNATAGYLMKPCLAWVAFLAV 180

Query: 181 VSLTMV 187
           V+L +V
Sbjct: 181 VNLKLV 184

[Close]
BLAST of CmoCh17G010760 vs. NCBI nr
Match: gi|1009148500|ref|XP_015891970.1| (PREDICTED: translocator protein homolog [Ziziphus jujuba])

HSP 1 Score: 156.0 bits (393), Expect = 6.5e-35
Identity = 80/187 (42.78%), Postives = 120/187 (64.17%), Query Frame = 1 

Query: 2   ASTELKHRTTGDSPAVPAAADEVSAKREKNKAIAKRGLKSLAVAVSIPIAVTLLSILLLA 61
           + + LK RT G+    P A+ +  ++R+K  A+AKRG +SLAVAVS+P++++LLSI L  
Sbjct: 3   SQSSLKQRTRGEP--TPTASKDNRSRRDKRMAMAKRGFRSLAVAVSLPVSLSLLSIYL-G 62

Query: 62  RPKNYYPSATKPFWVPSARVVNWGSLASSLLMGISSWLFWAEGGFQARPNALYLYTLYLV 121
              N Y  ++KPFW P    +++ ++ASS LMG+S+WL WA+GGF  +P A YLY   L 
Sbjct: 63  GSSNSYAISSKPFWFPPLWALHFTTIASSFLMGLSAWLVWAQGGFHKKPMAAYLYLTQLA 122

Query: 122 LCMAWHGLVLGAGSRWLGSVACLGKTATLVGCDRLFRGVNAIAADLVRPCLVWSVFLTIV 181
             +AW  +V G GS   G + CLG    L+GC   F+ VN IA D+++PC+ W+ FL IV
Sbjct: 123 FSLAWDPIVFGFGSTRAGLIVCLGMLVALLGCSSAFKQVNPIAGDVMKPCIAWNAFLAIV 182

Query: 182 SLTMVSV 189
           +  ++ +
Sbjct: 183 NFKLIFI 186

[Close]
BLAST of CmoCh17G010760 vs. NCBI nr
Match: gi|823202833|ref|XP_012435944.1| (PREDICTED: translocator protein homolog [Gossypium raimondii])

HSP 1 Score: 155.6 bits (392), Expect = 8.5e-35
Identity = 88/188 (46.81%), Postives = 114/188 (60.64%), Query Frame = 1 

Query: 1   MASTELKHRTTGDSPAVPAAADEVSA--KREKNKAIAKRGLKSLAVAVSIPIAVTLLSIL 60
           M S  LKHR+  D       ++E +   +REK  A+AKRGL+SL +AVS P+++TLL+I 
Sbjct: 1   MESQNLKHRSRDDPRFTTTTSNEKNRANRREKRMAMAKRGLRSLVIAVSFPLSLTLLNIY 60

Query: 61  LLARPKNYYPSATKPFWVPSARVVNWGSLASSLLMGISSWLFWAEGGFQARPNALYLYTL 120
           L    + Y  S  KPFW P   +++ G LASS +MG+S+W  W EGGF  +P AL LY  
Sbjct: 61  LFGSGRGY-ASLAKPFWFPPLWLLHTGCLASSFVMGLSAWFVWVEGGFHVKPTALSLYLG 120

Query: 121 YLVLCMAWHGLVLGAGSRWLGSVACLGKTATLVGCDRLFRGVNAIAADLVRPCLVWSVFL 180
           YL L MAWH  VL  G+ W G +  L    TLVGC R F  VN IA + V PCL W+ FL
Sbjct: 121 YLGLSMAWHPTVLWMGASWAGLLVSLAMVGTLVGCSRDFGKVNPIAGNSVMPCLAWAAFL 180

Query: 181 TIVSLTMV 187
             V+L +V
Sbjct: 181 ATVNLKLV 187

The following BLAST results are available for this feature:
BLAST of CmoCh17G010760 vs. Swiss-Prot
Match NameE-valueIdentityDescription
TSPO_ARATH1.7e-3037.82Translocator protein homolog OS=Arabidopsis thaliana GN=TSPO PE=1 SV=1[more]
BLAST of CmoCh17G010760 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KAU9_CUCSA7.2e-6568.06Uncharacterized protein OS=Cucumis sativus GN=Csa_7G396370 PE=4 SV=1[more]
A0A0D2SYA6_GOSRA5.9e-3546.81Uncharacterized protein OS=Gossypium raimondii GN=B456_008G011200 PE=4 SV=1[more]
A0A061DQD9_THECC2.3e-3445.64TSPO(Outer membrane tryptophan-rich sensory protein)-related OS=Theobroma cacao ... [more]
A0A067JW57_JATCU2.3e-3443.32Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13908 PE=4 SV=1[more]
I0B680_GOSHI2.9e-3447.34Putative peripheral-type benzodiazepine receptor OS=Gossypium hirsutum PE=2 SV=1[more]
BLAST of CmoCh17G010760 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G47770.19.4e-3237.82 TSPO(outer membrane tryptophan-rich sensory protein)-related[more]
BLAST of CmoCh17G010760 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659101426|ref|XP_008451600.1|7.9e-6568.06PREDICTED: translocator protein homolog [Cucumis melo][more]
gi|449436787|ref|XP_004136174.1|1.0e-6468.06PREDICTED: translocator protein homolog [Cucumis sativus][more]
gi|470108978|ref|XP_004290779.1|2.2e-3546.24PREDICTED: translocator protein homolog [Fragaria vesca subsp. vesca][more]
gi|1009148500|ref|XP_015891970.1|6.5e-3542.78PREDICTED: translocator protein homolog [Ziziphus jujuba][more]
gi|823202833|ref|XP_012435944.1|8.5e-3546.81PREDICTED: translocator protein homolog [Gossypium raimondii][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR004307TspO_MBR
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh17G010760.1CmoCh17G010760.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004307TspO/MBR-related proteinPIRPIRSF005859PBRcoord: 31..188
score: 8.5
IPR004307TspO/MBR-related proteinPANTHERPTHR10057PERIPHERAL-TYPE BENZODIAZEPINE RECEPTORcoord: 21..185
score: 1.5
IPR004307TspO/MBR-related proteinPFAMPF03073TspO_MBRcoord: 45..186
score: 8.1
NoneNo IPR availablePANTHERPTHR10057:SF0PROTEIN C41G7.9, ISOFORM Bcoord: 21..185
score: 1.5

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh17G010760Cucsa.205710Cucumber (Gy14) v1cgycmoB0608
CmoCh17G010760CmaCh17G011010Cucurbita maxima (Rimu)cmacmoB353
CmoCh17G010760CmaCh06G014990Cucurbita maxima (Rimu)cmacmoB814
CmoCh17G010760Cla015051Watermelon (97103) v1cmowmB322
CmoCh17G010760Csa7G396370Cucumber (Chinese Long) v2cmocuB378
CmoCh17G010760Csa3G154290Cucumber (Chinese Long) v2cmocuB354
CmoCh17G010760MELO3C016017Melon (DHL92) v3.5.1cmomeB313
CmoCh17G010760ClCG09G006030Watermelon (Charleston Gray)cmowcgB299
CmoCh17G010760CSPI07G17310Wild cucumber (PI 183967)cmocpiB381
CmoCh17G010760Lsi02G023870Bottle gourd (USVL1VR-Ls)cmolsiB337
CmoCh17G010760Cp4.1LG12g05440Cucurbita pepo (Zucchini)cmocpeB335
CmoCh17G010760Cp4.1LG08g04900Cucurbita pepo (Zucchini)cmocpeB371
CmoCh17G010760MELO3C016017.2Melon (DHL92) v3.6.1cmomedB359
CmoCh17G010760MELO3C006663.2Melon (DHL92) v3.6.1cmomedB388
CmoCh17G010760CsaV3_7G029110Cucumber (Chinese Long) v3cmocucB0455
CmoCh17G010760CsaV3_3G014620Cucumber (Chinese Long) v3cmocucB0428
CmoCh17G010760Cla97C09G168590Watermelon (97103) v2cmowmbB369
CmoCh17G010760Cla97C05G087600Watermelon (97103) v2cmowmbB353
CmoCh17G010760Bhi09G000700Wax gourdcmowgoB0493
CmoCh17G010760Bhi01G000717Wax gourdcmowgoB0477
CmoCh17G010760CsGy3G014540Cucumber (Gy14) v2cgybcmoB323
CmoCh17G010760CsGy7G015750Cucumber (Gy14) v2cgybcmoB909
CmoCh17G010760Carg07183Silver-seed gourdcarcmoB0152
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh17G010760Cucurbita moschata (Rifu)cmocmoB199
CmoCh17G010760Cucurbita moschata (Rifu)cmocmoB319
CmoCh17G010760Cucumber (Gy14) v1cgycmoB0191
CmoCh17G010760Cucurbita maxima (Rimu)cmacmoB254
CmoCh17G010760Cucurbita maxima (Rimu)cmacmoB896
CmoCh17G010760Wild cucumber (PI 183967)cmocpiB359
CmoCh17G010760Cucumber (Chinese Long) v2cmocuB356
CmoCh17G010760Melon (DHL92) v3.5.1cmomeB339
CmoCh17G010760Watermelon (Charleston Gray)cmowcgB309
CmoCh17G010760Watermelon (97103) v1cmowmB332
CmoCh17G010760Cucurbita pepo (Zucchini)cmocpeB339
CmoCh17G010760Bottle gourd (USVL1VR-Ls)cmolsiB340
CmoCh17G010760Cucumber (Gy14) v2cgybcmoB472
CmoCh17G010760Melon (DHL92) v3.6.1cmomedB389
CmoCh17G010760Silver-seed gourdcarcmoB1103
CmoCh17G010760Cucumber (Chinese Long) v3cmocucB0431
CmoCh17G010760Watermelon (97103) v2cmowmbB344
CmoCh17G010760Wax gourdcmowgoB0452