Cucsa.205710 (gene) Cucumber (Gy14) v1

Overview
NameCucsa.205710
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionTSPO(Outer membrane tryptophan-rich sensory protein)-related
Locationscaffold01416 : 727106 .. 727681 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTTCCACCGATCTAAAACACCGAAAAACCGATGACTCCACCCCCACTTCCACCGTCTCTGCCGATGACAACGACGGTACCAAAAAATCCAAGAACAAAGTCATAGCCAAACGAGGCCTAAGATCTCTAGCTCTTGCCATCTCCATCCCCGTTTCCCTCACTCTCTTTTTCATCCTCCTATTCTCCAACTCCAAGAACTACTACCCAGCCTCCGCCCCGAAACCCTTCTGGGTCCCGTCGGCAAAGGTCGTAAACTGGGGGTCTTTGACTTCTAGCTTGTTAATGGGCGTCGCCGCCTGGCTGGTCTGGGCCGAGGGCGGATTCCACGCCAGACCCAACGCCCTATACCTTTATGGTTTGTATTCAGTGTTGTGTCTGACGTGGTACGCCCTCATGTTTGGTGCTGGCGCGCGACGGCTTAGTGCTTTGGCGTGTTTGGGAAAGACAGCAGCGTTGGTTGGGTGCGACCGGTTGTTTAGAGGAGTGAACCCACTTGCGGCAGATTTGGTTAAGCCATGCTTGGTTTGGTCTGTTTTGCTTACGGTTGTGAATCTCACTGTAGTCTCTCTTTGA

mRNA sequence

ATGGCTTCCACCGATCTAAAACACCGAAAAACCGATGACTCCACCCCCACTTCCACCGTCTCTGCCGATGACAACGACGGTACCAAAAAATCCAAGAACAAAGTCATAGCCAAACGAGGCCTAAGATCTCTAGCTCTTGCCATCTCCATCCCCGTTTCCCTCACTCTCTTTTTCATCCTCCTATTCTCCAACTCCAAGAACTACTACCCAGCCTCCGCCCCGAAACCCTTCTGGGTCCCGTCGGCAAAGGTCGTAAACTGGGGGTCTTTGACTTCTAGCTTGTTAATGGGCGTCGCCGCCTGGCTGGTCTGGGCCGAGGGCGGATTCCACGCCAGACCCAACGCCCTATACCTTTATGGTTTGTATTCAGTGTTGTGTCTGACGTGGTACGCCCTCATGTTTGGTGCTGGCGCGCGACGGCTTAGTGCTTTGGCGTGTTTGGGAAAGACAGCAGCGTTGGTTGGGTGCGACCGGTTGTTTAGAGGAGTGAACCCACTTGCGGCAGATTTGGTTAAGCCATGCTTGGTTTGGTCTGTTTTGCTTACGGTTGTGAATCTCACTGTAGTCTCTCTTTGA

Coding sequence (CDS)

ATGGCTTCCACCGATCTAAAACACCGAAAAACCGATGACTCCACCCCCACTTCCACCGTCTCTGCCGATGACAACGACGGTACCAAAAAATCCAAGAACAAAGTCATAGCCAAACGAGGCCTAAGATCTCTAGCTCTTGCCATCTCCATCCCCGTTTCCCTCACTCTCTTTTTCATCCTCCTATTCTCCAACTCCAAGAACTACTACCCAGCCTCCGCCCCGAAACCCTTCTGGGTCCCGTCGGCAAAGGTCGTAAACTGGGGGTCTTTGACTTCTAGCTTGTTAATGGGCGTCGCCGCCTGGCTGGTCTGGGCCGAGGGCGGATTCCACGCCAGACCCAACGCCCTATACCTTTATGGTTTGTATTCAGTGTTGTGTCTGACGTGGTACGCCCTCATGTTTGGTGCTGGCGCGCGACGGCTTAGTGCTTTGGCGTGTTTGGGAAAGACAGCAGCGTTGGTTGGGTGCGACCGGTTGTTTAGAGGAGTGAACCCACTTGCGGCAGATTTGGTTAAGCCATGCTTGGTTTGGTCTGTTTTGCTTACGGTTGTGAATCTCACTGTAGTCTCTCTTTGA

Protein sequence

MASTDLKHRKTDDSTPTSTVSADDNDGTKKSKNKVIAKRGLRSLALAISIPVSLTLFFILLFSNSKNYYPASAPKPFWVPSAKVVNWGSLTSSLLMGVAAWLVWAEGGFHARPNALYLYGLYSVLCLTWYALMFGAGARRLSALACLGKTAALVGCDRLFRGVNPLAADLVKPCLVWSVLLTVVNLTVVSL*
Homology
[Close]
BLAST of Cucsa.205710 vs. Swiss-Prot
Match: TSPO_ARATH (Translocator protein homolog OS=Arabidopsis thaliana GN=TSPO PE=1 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 1.8e-35
Identity = 80/193 (41.45%), Postives = 115/193 (59.59%), Query Frame = 1 

Query: 1   MASTDLKHRKTDDSTPTSTV-------SADDNDGTKKSKNKVIAKRGLRSLALAISIPVS 60
           M S D+++R  DD    +T        SADDN G K+ + + +AKRGL+SL +A++ PV 
Sbjct: 1   MDSQDIRYRGGDDRDAATTAMAETERKSADDNKG-KRDQKRAMAKRGLKSLTVAVAAPVL 60

Query: 61  LTLFFILLFSNSKNYYPASAPKPFWVPSAKVVNWGSLTSSLLMGVAAWLVWAEGGFHARP 120
           +TLF    F  + + Y   A    W+P   +++   L SS LMG+AAWLVW +GGFH +P
Sbjct: 61  VTLF-ATYFLGTSDGYGNRAKSSSWIPPLWLLHTTCLASSGLMGLAAWLVWVDGGFHKKP 120

Query: 121 NALYLYGLYSVLCLTWYALMFGAGARRLSALACLGKTAALVGCDRLFRGVNPLAADLVKP 180
           NALYLY    +LCL W  + F  G+        LG++AAL GC + F  ++P+A +LVKP
Sbjct: 121 NALYLYLAQFLLCLVWDPVTFRVGSGVAGLAVWLGQSAALFGCYKAFNEISPVAGNLVKP 180

Query: 181 CLVWSVLLTVVNL 187
           CL W+  +  VN+
Sbjct: 181 CLAWAAFVAAVNV 191

[Close]
BLAST of Cucsa.205710 vs. TrEMBL
Match: A0A0A0KAU9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G396370 PE=4 SV=1)

HSP 1 Score: 384.0 bits (985), Expect = 1.0e-103
Identity = 191/191 (100.00%), Postives = 191/191 (100.00%), Query Frame = 1 

Query: 1   MASTDLKHRKTDDSTPTSTVSADDNDGTKKSKNKVIAKRGLRSLALAISIPVSLTLFFIL 60
           MASTDLKHRKTDDSTPTSTVSADDNDGTKKSKNKVIAKRGLRSLALAISIPVSLTLFFIL
Sbjct: 1   MASTDLKHRKTDDSTPTSTVSADDNDGTKKSKNKVIAKRGLRSLALAISIPVSLTLFFIL 60

Query: 61  LFSNSKNYYPASAPKPFWVPSAKVVNWGSLTSSLLMGVAAWLVWAEGGFHARPNALYLYG 120
           LFSNSKNYYPASAPKPFWVPSAKVVNWGSLTSSLLMGVAAWLVWAEGGFHARPNALYLYG
Sbjct: 61  LFSNSKNYYPASAPKPFWVPSAKVVNWGSLTSSLLMGVAAWLVWAEGGFHARPNALYLYG 120

Query: 121 LYSVLCLTWYALMFGAGARRLSALACLGKTAALVGCDRLFRGVNPLAADLVKPCLVWSVL 180
           LYSVLCLTWYALMFGAGARRLSALACLGKTAALVGCDRLFRGVNPLAADLVKPCLVWSVL
Sbjct: 121 LYSVLCLTWYALMFGAGARRLSALACLGKTAALVGCDRLFRGVNPLAADLVKPCLVWSVL 180

Query: 181 LTVVNLTVVSL 192
           LTVVNLTVVSL
Sbjct: 181 LTVVNLTVVSL 191

[Close]
BLAST of Cucsa.205710 vs. TrEMBL
Match: I0B680_GOSHI (Putative peripheral-type benzodiazepine receptor OS=Gossypium hirsutum PE=2 SV=1)

HSP 1 Score: 174.1 bits (440), Expect = 1.6e-40
Identity = 90/191 (47.12%), Postives = 114/191 (59.69%), Query Frame = 1 

Query: 1   MASTDLKHRKTDDSTPTSTVSADDNDGTKKSKNKVIAKRGLRSLALAISIPVSLTLFFIL 60
           M S +LKHR  DD   T+T S + N   ++ K   +AKRGLRSL +A+S P+SLTL  I 
Sbjct: 1   MESQNLKHRSRDDPRFTTTTSNEKNRANRREKRMAMAKRGLRSLVIAVSFPLSLTLLNIY 60

Query: 61  LFSNSKNYYPASAPKPFWVPSAKVVNWGSLTSSLLMGVAAWLVWAEGGFHARPNALYLYG 120
           LF + + Y  AS  KPFW P   +++ G L SS LMG++AW VW EGGFH +P AL LY 
Sbjct: 61  LFGSGRGY--ASLAKPFWFPPLWLLHTGCLASSFLMGLSAWFVWVEGGFHVKPTALSLYL 120

Query: 121 LYSVLCLTWYALMFGAGARRLSALACLGKTAALVGCDRLFRGVNPLAADLVKPCLVWSVL 180
            Y  L + W+  +   GA R   L  L     LVGC R FR VNP+A + V PCL W+  
Sbjct: 121 GYLGLSMAWHPTVLWMGASRAGLLVNLAMVGTLVGCSRDFRKVNPIAGNSVMPCLAWAAF 180

Query: 181 LTVVNLTVVSL 192
           L  VNL +V L
Sbjct: 181 LATVNLKLVFL 189

[Close]
BLAST of Cucsa.205710 vs. TrEMBL
Match: A0A061DQD9_THECC (TSPO(Outer membrane tryptophan-rich sensory protein)-related OS=Theobroma cacao GN=TCM_004622 PE=4 SV=1)

HSP 1 Score: 173.7 bits (439), Expect = 2.1e-40
Identity = 95/199 (47.74%), Postives = 120/199 (60.30%), Query Frame = 1 

Query: 1   MASTDLKHRKTDDSTPTSTVSADDNDGTKKSKNKV--------IAKRGLRSLALAISIPV 60
           M S  LK R  DD  P  T + +D D  K  KN+         +AKRGLRSLA+A+S+P+
Sbjct: 1   MESQTLKQRFRDDD-PRITTTTNDKDNNKNEKNRTSRREKRMGMAKRGLRSLAVAVSLPL 60

Query: 61  SLTLFFILLFSNSKNYYPASAPKPFWVPSAKVVNWGSLTSSLLMGVAAWLVWAEGGFHAR 120
           SLTL  I LF +   Y   + PKPFW P   +++   + SS LMG++AWLVWAEGGFHAR
Sbjct: 61  SLTLLNIYLFGSGHGY--GALPKPFWFPPLWLIHITCMASSFLMGLSAWLVWAEGGFHAR 120

Query: 121 PNALYLYGLYSVLCLTWYALMFGAGARRLSALACLGKTAALVGCDRLFRGVNPLAADLVK 180
           P AL L+     L L W  ++F  GA  +  +  L    ALVGC R FR VNP+A DLVK
Sbjct: 121 PRALSLFMAQLGLSLAWLPIVFWVGASWVGLVVRLAVFGALVGCSRDFREVNPIAGDLVK 180

Query: 181 PCLVWSVLLTVVNLTVVSL 192
           PCL W+  L +VNL +V L
Sbjct: 181 PCLAWAAFLAIVNLKLVFL 196

[Close]
BLAST of Cucsa.205710 vs. TrEMBL
Match: A0A068U4L8_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00015906001 PE=4 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 8.2e-40
Identity = 90/193 (46.63%), Postives = 121/193 (62.69%), Query Frame = 1 

Query: 1   MASTDLKHRKTDDSTPTSTVSADDNDGTK----KSKNKVIAKRGLRSLALAISIPVSLTL 60
           MAS +LKHR  D+          D   T     + K   +AKRGLRSL LA+++P+SLTL
Sbjct: 1   MASQELKHRTRDEEAEEEIQPPKDTGTTATRRHQKKRTAMAKRGLRSLGLALALPLSLTL 60

Query: 61  FFILLFSNSKNYYPASAPKPFWVPSAKVVNWGSLTSSLLMGVAAWLVWAEGGFHARPNAL 120
             I LF +S  Y  A+  KPFW P    ++   L S+ LMG++AWLVWAEGGFH  P AL
Sbjct: 61  LDISLFGSSLQY--ATMKKPFWSPPLWALHSACLASAFLMGLSAWLVWAEGGFHRNPTAL 120

Query: 121 YLYGLYSVLCLTWYALMFGAGARRLSALACLGKTAALVGCDRLFRGVNPLAADLVKPCLV 180
            LY     L L W  ++F AGA R+  + C+    ALVGC R+FR +NP+AADLVKPCL+
Sbjct: 121 LLYLGQLSLSLAWDPIVFQAGASRMGLVLCVALFGALVGCARIFRTMNPIAADLVKPCLL 180

Query: 181 WSVLLTVVNLTVV 190
           W+++L++ N+ +V
Sbjct: 181 WALILSLANIVLV 191

[Close]
BLAST of Cucsa.205710 vs. TrEMBL
Match: F6HZ32_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0005g00140 PE=4 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 2.4e-39
Identity = 96/190 (50.53%), Postives = 122/190 (64.21%), Query Frame = 1 

Query: 1   MASTDLKHR-KTDDSTPTSTVSADDNDGTKKSKNKVIAKRGLRSLALAISIPVSLTLFFI 60
           MAST+LK R K   STP  T     N+ TK+ K   +AKRGLRSL  A+SIP+SLTL  I
Sbjct: 1   MASTNLKQRIKDGPSTPFPT-----NNTTKREKKMAMAKRGLRSLTTAVSIPLSLTLVTI 60

Query: 61  LLFSNSKNYYPASAPKPFWVPSAKVVNWGSLTSSLLMGVAAWLVWAEGGFHARPNALYLY 120
             FS + + Y  + PKPFW P    V+  S+ SSLLMG++AWLVWAEGGFH +P AL L+
Sbjct: 61  Y-FSGATDRY-RTLPKPFWFPPLWAVHATSMASSLLMGLSAWLVWAEGGFHKKPTALPLF 120

Query: 121 GLYSVLCLTWYALMFGAGARRLSALACLGKTAALVGCDRLFRGVNPLAADLVKPCLVWSV 180
                L L    ++FG G  R+  + C+G   ALVGC R+FR VNP+A DLVKPCL W+ 
Sbjct: 121 VAQLALSLIRDPIVFGYGGTRVGLVVCMGLFGALVGCARMFREVNPIAGDLVKPCLAWTA 180

Query: 181 LLTVVNLTVV 190
            + VV L ++
Sbjct: 181 YVGVVTLKLL 183

[Close]
BLAST of Cucsa.205710 vs. TAIR10
Match: AT2G47770.1 (AT2G47770.1 TSPO(outer membrane tryptophan-rich sensory protein)-related)

HSP 1 Score: 150.6 bits (379), Expect = 9.9e-37
Identity = 80/193 (41.45%), Postives = 115/193 (59.59%), Query Frame = 1 

Query: 1   MASTDLKHRKTDDSTPTSTV-------SADDNDGTKKSKNKVIAKRGLRSLALAISIPVS 60
           M S D+++R  DD    +T        SADDN G K+ + + +AKRGL+SL +A++ PV 
Sbjct: 1   MDSQDIRYRGGDDRDAATTAMAETERKSADDNKG-KRDQKRAMAKRGLKSLTVAVAAPVL 60

Query: 61  LTLFFILLFSNSKNYYPASAPKPFWVPSAKVVNWGSLTSSLLMGVAAWLVWAEGGFHARP 120
           +TLF    F  + + Y   A    W+P   +++   L SS LMG+AAWLVW +GGFH +P
Sbjct: 61  VTLF-ATYFLGTSDGYGNRAKSSSWIPPLWLLHTTCLASSGLMGLAAWLVWVDGGFHKKP 120

Query: 121 NALYLYGLYSVLCLTWYALMFGAGARRLSALACLGKTAALVGCDRLFRGVNPLAADLVKP 180
           NALYLY    +LCL W  + F  G+        LG++AAL GC + F  ++P+A +LVKP
Sbjct: 121 NALYLYLAQFLLCLVWDPVTFRVGSGVAGLAVWLGQSAALFGCYKAFNEISPVAGNLVKP 180

Query: 181 CLVWSVLLTVVNL 187
           CL W+  +  VN+
Sbjct: 181 CLAWAAFVAAVNV 191

[Close]
BLAST of Cucsa.205710 vs. NCBI nr
Match: gi|449436787|ref|XP_004136174.1| (PREDICTED: translocator protein homolog [Cucumis sativus])

HSP 1 Score: 384.0 bits (985), Expect = 1.5e-103
Identity = 191/191 (100.00%), Postives = 191/191 (100.00%), Query Frame = 1 

Query: 1   MASTDLKHRKTDDSTPTSTVSADDNDGTKKSKNKVIAKRGLRSLALAISIPVSLTLFFIL 60
           MASTDLKHRKTDDSTPTSTVSADDNDGTKKSKNKVIAKRGLRSLALAISIPVSLTLFFIL
Sbjct: 1   MASTDLKHRKTDDSTPTSTVSADDNDGTKKSKNKVIAKRGLRSLALAISIPVSLTLFFIL 60

Query: 61  LFSNSKNYYPASAPKPFWVPSAKVVNWGSLTSSLLMGVAAWLVWAEGGFHARPNALYLYG 120
           LFSNSKNYYPASAPKPFWVPSAKVVNWGSLTSSLLMGVAAWLVWAEGGFHARPNALYLYG
Sbjct: 61  LFSNSKNYYPASAPKPFWVPSAKVVNWGSLTSSLLMGVAAWLVWAEGGFHARPNALYLYG 120

Query: 121 LYSVLCLTWYALMFGAGARRLSALACLGKTAALVGCDRLFRGVNPLAADLVKPCLVWSVL 180
           LYSVLCLTWYALMFGAGARRLSALACLGKTAALVGCDRLFRGVNPLAADLVKPCLVWSVL
Sbjct: 121 LYSVLCLTWYALMFGAGARRLSALACLGKTAALVGCDRLFRGVNPLAADLVKPCLVWSVL 180

Query: 181 LTVVNLTVVSL 192
           LTVVNLTVVSL
Sbjct: 181 LTVVNLTVVSL 191

[Close]
BLAST of Cucsa.205710 vs. NCBI nr
Match: gi|659101426|ref|XP_008451600.1| (PREDICTED: translocator protein homolog [Cucumis melo])

HSP 1 Score: 355.5 bits (911), Expect = 5.7e-95
Identity = 174/191 (91.10%), Postives = 183/191 (95.81%), Query Frame = 1 

Query: 1   MASTDLKHRKTDDSTPTSTVSADDNDGTKKSKNKVIAKRGLRSLALAISIPVSLTLFFIL 60
           MASTDLKHRKTDDSTPTSTV+AD NDGTKK++NKVIAKRGLRSLALAISIPVSLTL FI 
Sbjct: 1   MASTDLKHRKTDDSTPTSTVTADVNDGTKKARNKVIAKRGLRSLALAISIPVSLTLLFIF 60

Query: 61  LFSNSKNYYPASAPKPFWVPSAKVVNWGSLTSSLLMGVAAWLVWAEGGFHARPNALYLYG 120
           LFSNSKNYYPASA +PFWVPS KVVNWGSLTSSLLMGVAAWLVWAEGGFH+RPNALYLYG
Sbjct: 61  LFSNSKNYYPASAGRPFWVPSTKVVNWGSLTSSLLMGVAAWLVWAEGGFHSRPNALYLYG 120

Query: 121 LYSVLCLTWYALMFGAGARRLSALACLGKTAALVGCDRLFRGVNPLAADLVKPCLVWSVL 180
           LY VLCL WYAL+FGAGARRLS+LACLGKTAALVGCDRLFRGVNP+AADLVKPCLVWSVL
Sbjct: 121 LYLVLCLAWYALVFGAGARRLSSLACLGKTAALVGCDRLFRGVNPIAADLVKPCLVWSVL 180

Query: 181 LTVVNLTVVSL 192
           LTVVNLT+ SL
Sbjct: 181 LTVVNLTMASL 191

[Close]
BLAST of Cucsa.205710 vs. NCBI nr
Match: gi|383932366|gb|AFH57280.1| (putative peripheral-type benzodiazepine receptor [Gossypium hirsutum])

HSP 1 Score: 174.1 bits (440), Expect = 2.4e-40
Identity = 90/191 (47.12%), Postives = 114/191 (59.69%), Query Frame = 1 

Query: 1   MASTDLKHRKTDDSTPTSTVSADDNDGTKKSKNKVIAKRGLRSLALAISIPVSLTLFFIL 60
           M S +LKHR  DD   T+T S + N   ++ K   +AKRGLRSL +A+S P+SLTL  I 
Sbjct: 1   MESQNLKHRSRDDPRFTTTTSNEKNRANRREKRMAMAKRGLRSLVIAVSFPLSLTLLNIY 60

Query: 61  LFSNSKNYYPASAPKPFWVPSAKVVNWGSLTSSLLMGVAAWLVWAEGGFHARPNALYLYG 120
           LF + + Y  AS  KPFW P   +++ G L SS LMG++AW VW EGGFH +P AL LY 
Sbjct: 61  LFGSGRGY--ASLAKPFWFPPLWLLHTGCLASSFLMGLSAWFVWVEGGFHVKPTALSLYL 120

Query: 121 LYSVLCLTWYALMFGAGARRLSALACLGKTAALVGCDRLFRGVNPLAADLVKPCLVWSVL 180
            Y  L + W+  +   GA R   L  L     LVGC R FR VNP+A + V PCL W+  
Sbjct: 121 GYLGLSMAWHPTVLWMGASRAGLLVNLAMVGTLVGCSRDFRKVNPIAGNSVMPCLAWAAF 180

Query: 181 LTVVNLTVVSL 192
           L  VNL +V L
Sbjct: 181 LATVNLKLVFL 189

[Close]
BLAST of Cucsa.205710 vs. NCBI nr
Match: gi|590718702|ref|XP_007050872.1| (TSPO(outer membrane tryptophan-rich sensory protein)-related [Theobroma cacao])

HSP 1 Score: 173.7 bits (439), Expect = 3.1e-40
Identity = 95/199 (47.74%), Postives = 120/199 (60.30%), Query Frame = 1 

Query: 1   MASTDLKHRKTDDSTPTSTVSADDNDGTKKSKNKV--------IAKRGLRSLALAISIPV 60
           M S  LK R  DD  P  T + +D D  K  KN+         +AKRGLRSLA+A+S+P+
Sbjct: 1   MESQTLKQRFRDDD-PRITTTTNDKDNNKNEKNRTSRREKRMGMAKRGLRSLAVAVSLPL 60

Query: 61  SLTLFFILLFSNSKNYYPASAPKPFWVPSAKVVNWGSLTSSLLMGVAAWLVWAEGGFHAR 120
           SLTL  I LF +   Y   + PKPFW P   +++   + SS LMG++AWLVWAEGGFHAR
Sbjct: 61  SLTLLNIYLFGSGHGY--GALPKPFWFPPLWLIHITCMASSFLMGLSAWLVWAEGGFHAR 120

Query: 121 PNALYLYGLYSVLCLTWYALMFGAGARRLSALACLGKTAALVGCDRLFRGVNPLAADLVK 180
           P AL L+     L L W  ++F  GA  +  +  L    ALVGC R FR VNP+A DLVK
Sbjct: 121 PRALSLFMAQLGLSLAWLPIVFWVGASWVGLVVRLAVFGALVGCSRDFREVNPIAGDLVK 180

Query: 181 PCLVWSVLLTVVNLTVVSL 192
           PCL W+  L +VNL +V L
Sbjct: 181 PCLAWAAFLAIVNLKLVFL 196

[Close]
BLAST of Cucsa.205710 vs. NCBI nr
Match: gi|747066078|ref|XP_011079708.1| (PREDICTED: translocator protein homolog [Sesamum indicum])

HSP 1 Score: 172.6 bits (436), Expect = 6.9e-40
Identity = 91/190 (47.89%), Postives = 120/190 (63.16%), Query Frame = 1 

Query: 1   MASTDLKHR-KTDDSTPTSTVSADDNDGTKKSKNKVIAKRGLRSLALAISIPVSLTLFFI 60
           MAS DLKHR K  + T    ++AD + G  K K    A+RGLRSL +A++ P+SL L  I
Sbjct: 1   MASQDLKHRTKQQEQTQPEVITADTSTGDAKQKKTGTARRGLRSLIVAVAFPLSLALLDI 60

Query: 61  LLFSNSKNYYPASAPKPFWVPSAKVVNWGSLTSSLLMGVAAWLVWAEGGFHARPNALYLY 120
             F +SK Y   S  KPF+ P    ++   L ++ L G++AWLVWAEGGFH  P AL LY
Sbjct: 61  FYFGSSKRY--RSLHKPFYFPPLWALHAACLATAFLSGLSAWLVWAEGGFHRNPTALILY 120

Query: 121 GLYSVLCLTWYALMFGAGARRLSALACLGKTAALVGCDRLFRGVNPLAADLVKPCLVWSV 180
                + L WY ++FGAGA R+  + C      LVGC R+FR +NP+A DLVK CLVW+V
Sbjct: 121 LGQLAITLGWYPVVFGAGAIRVGLVLCGVLFGVLVGCTRIFRNMNPIAGDLVKACLVWAV 180

Query: 181 LLTVVNLTVV 190
           LL+VVN+ +V
Sbjct: 181 LLSVVNVRLV 188

The following BLAST results are available for this feature:
BLAST of Cucsa.205710 vs. Swiss-Prot
Match NameE-valueIdentityDescription
TSPO_ARATH1.8e-3541.45Translocator protein homolog OS=Arabidopsis thaliana GN=TSPO PE=1 SV=1[more]
BLAST of Cucsa.205710 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KAU9_CUCSA1.0e-103100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_7G396370 PE=4 SV=1[more]
I0B680_GOSHI1.6e-4047.12Putative peripheral-type benzodiazepine receptor OS=Gossypium hirsutum PE=2 SV=1[more]
A0A061DQD9_THECC2.1e-4047.74TSPO(Outer membrane tryptophan-rich sensory protein)-related OS=Theobroma cacao ... [more]
A0A068U4L8_COFCA8.2e-4046.63Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00015906001 PE=4 SV=1[more]
F6HZ32_VITVI2.4e-3950.53Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0005g00140 PE=4 SV=... [more]
BLAST of Cucsa.205710 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G47770.19.9e-3741.45 TSPO(outer membrane tryptophan-rich sensory protein)-related[more]
BLAST of Cucsa.205710 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449436787|ref|XP_004136174.1|1.5e-103100.00PREDICTED: translocator protein homolog [Cucumis sativus][more]
gi|659101426|ref|XP_008451600.1|5.7e-9591.10PREDICTED: translocator protein homolog [Cucumis melo][more]
gi|383932366|gb|AFH57280.1|2.4e-4047.12putative peripheral-type benzodiazepine receptor [Gossypium hirsutum][more]
gi|590718702|ref|XP_007050872.1|3.1e-4047.74TSPO(outer membrane tryptophan-rich sensory protein)-related [Theobroma cacao][more]
gi|747066078|ref|XP_011079708.1|6.9e-4047.89PREDICTED: translocator protein homolog [Sesamum indicum][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR004307TspO_MBR
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.205710.1Cucsa.205710.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004307TspO/MBR-related proteinPIRPIRSF005859PBRcoord: 33..191
score: 9.9
IPR004307TspO/MBR-related proteinPANTHERPTHR10057PERIPHERAL-TYPE BENZODIAZEPINE RECEPTORcoord: 28..191
score: 3.7
IPR004307TspO/MBR-related proteinPFAMPF03073TspO_MBRcoord: 47..189
score: 1.3
NoneNo IPR availablePANTHERPTHR10057:SF0PROTEIN C41G7.9, ISOFORM Bcoord: 28..191
score: 3.7

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cucsa.205710Cla015051Watermelon (97103) v1cgywmB402
Cucsa.205710Cla021740Watermelon (97103) v1cgywmB405
Cucsa.205710Csa7G396370Cucumber (Chinese Long) v2cgycuB312
Cucsa.205710MELO3C016017Melon (DHL92) v3.5.1cgymeB371
Cucsa.205710ClCG09G006030Watermelon (Charleston Gray)cgywcgB379
Cucsa.205710CSPI07G17310Wild cucumber (PI 183967)cgycpiB325
Cucsa.205710CmaCh17G011010Cucurbita maxima (Rimu)cgycmaB0606
Cucsa.205710CmoCh17G010760Cucurbita moschata (Rifu)cgycmoB0608
Cucsa.205710Lsi02G023870Bottle gourd (USVL1VR-Ls)cgylsiB351
Cucsa.205710Cp4.1LG12g05440Cucurbita pepo (Zucchini)cgycpeB0579
Cucsa.205710MELO3C016017.2Melon (DHL92) v3.6.1cgymedB368
Cucsa.205710CsaV3_7G029110Cucumber (Chinese Long) v3cgycucB330
Cucsa.205710Cla97C09G168590Watermelon (97103) v2cgywmbB383
Cucsa.205710Bhi01G000717Wax gourdcgywgoB430
Cucsa.205710Bhi09G000700Wax gourdcgywgoB432
Cucsa.205710Carg07183Silver-seed gourdcarcgyB0132
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cucsa.205710Cucurbita pepo (Zucchini)cgycpeB0580
Cucsa.205710Bottle gourd (USVL1VR-Ls)cgylsiB352
Cucsa.205710Melon (DHL92) v3.6.1cgymedB369
Cucsa.205710Silver-seed gourdcarcgyB0932
Cucsa.205710Cucumber (Chinese Long) v3cgycucB329
Cucsa.205710Watermelon (97103) v2cgywmbB382
Cucsa.205710Cucumber (Gy14) v1cgycgyB035
Cucsa.205710Cucurbita maxima (Rimu)cgycmaB0608
Cucsa.205710Cucurbita moschata (Rifu)cgycmoB0607
Cucsa.205710Cucurbita moschata (Rifu)cgycmoB0610
Cucsa.205710Wild cucumber (PI 183967)cgycpiB324
Cucsa.205710Cucumber (Chinese Long) v2cgycuB311
Cucsa.205710Melon (DHL92) v3.5.1cgymeB372
Cucsa.205710Watermelon (Charleston Gray)cgywcgB381
Cucsa.205710Watermelon (97103) v1cgywmB404