CSPI07G17310 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTTTAAATCCCCTCTCCCCTACAAATCTCCACCCAGAAAATGGCTTCCACCGATCTAAAACACCGAAAAACCGATGACTCCACCCCCACTTCCACCGTCTCTGCCGATGACAACGACGGTACCAAAAAATCCAAGAACAAAGTCATAGCCAAACGAGGCCTAAGATCTCTAGCTCTTGCCATCTCCATCCCCGTTTCCCTCACTCTCTTTTTCATCCTCCTATTCTCCAACTCCAAGAACTACTACCCAGCCTCCGCCCCGAAACCCTTCTGGGTCCCGTCGGCAAAGGTCGTAAACTGGGGGTCTTTGACTTCTAGCTTGTTAATGGGCGTCGCCGCCTGGCTGGTCTGGGCCGAGGGCGGATTCCACGCCAGACCCAACGCCCTGTACCTTTATGGTTTGTATTCAGTGTTGTGTCTGACGTGGTACGCCCTCATGTTTGGTGCTGGCGCGCGACGGCTTAGTGCTTTGGCGTGTTTGGGAAAGACAGCAGCGTTGGTTGGGTGCGACCGGTTGTTTAGAGGAGTGAACCCACTTGCGGCAGATTTGGTTAAGCCATGCTTGGTTTGGTCTGTTTTGCTTACGGTTGTGAATCTCACTGTAGTCTCTCTTTGAGCTAGGTTTAATAATAAAATAACATGGCTATGTTGTCTTCTTCTTTTGGTTCTTTTTCTTTCTTTTGATTCACTTGTGAATTGGATTATGTGGCTTCTGATTTTGCACTTTTAAATATAAATT ATGGCTTCCACCGATCTAAAACACCGAAAAACCGATGACTCCACCCCCACTTCCACCGTCTCTGCCGATGACAACGACGGTACCAAAAAATCCAAGAACAAAGTCATAGCCAAACGAGGCCTAAGATCTCTAGCTCTTGCCATCTCCATCCCCGTTTCCCTCACTCTCTTTTTCATCCTCCTATTCTCCAACTCCAAGAACTACTACCCAGCCTCCGCCCCGAAACCCTTCTGGGTCCCGTCGGCAAAGGTCGTAAACTGGGGGTCTTTGACTTCTAGCTTGTTAATGGGCGTCGCCGCCTGGCTGGTCTGGGCCGAGGGCGGATTCCACGCCAGACCCAACGCCCTGTACCTTTATGGTTTGTATTCAGTGTTGTGTCTGACGTGGTACGCCCTCATGTTTGGTGCTGGCGCGCGACGGCTTAGTGCTTTGGCGTGTTTGGGAAAGACAGCAGCGTTGGTTGGGTGCGACCGGTTGTTTAGAGGAGTGAACCCACTTGCGGCAGATTTGGTTAAGCCATGCTTGGTTTGGTCTGTTTTGCTTACGGTTGTGAATCTCACTGTAGTCTCTCTTTGA ATGGCTTCCACCGATCTAAAACACCGAAAAACCGATGACTCCACCCCCACTTCCACCGTCTCTGCCGATGACAACGACGGTACCAAAAAATCCAAGAACAAAGTCATAGCCAAACGAGGCCTAAGATCTCTAGCTCTTGCCATCTCCATCCCCGTTTCCCTCACTCTCTTTTTCATCCTCCTATTCTCCAACTCCAAGAACTACTACCCAGCCTCCGCCCCGAAACCCTTCTGGGTCCCGTCGGCAAAGGTCGTAAACTGGGGGTCTTTGACTTCTAGCTTGTTAATGGGCGTCGCCGCCTGGCTGGTCTGGGCCGAGGGCGGATTCCACGCCAGACCCAACGCCCTGTACCTTTATGGTTTGTATTCAGTGTTGTGTCTGACGTGGTACGCCCTCATGTTTGGTGCTGGCGCGCGACGGCTTAGTGCTTTGGCGTGTTTGGGAAAGACAGCAGCGTTGGTTGGGTGCGACCGGTTGTTTAGAGGAGTGAACCCACTTGCGGCAGATTTGGTTAAGCCATGCTTGGTTTGGTCTGTTTTGCTTACGGTTGTGAATCTCACTGTAGTCTCTCTTTGA
BLAST of CSPI07G17310 vs. Swiss-Prot
Match: TSPO_ARATH (Translocator protein homolog OS=Arabidopsis thaliana GN=TSPO PE=1 SV=1) HSP 1 Score: 138.7 bits (348), Expect = 6.9e-32 Identity = 80/193 (41.45%), Postives = 115/193 (59.59%), Query Frame = 1
BLAST of CSPI07G17310 vs. TrEMBL
Match: A0A0A0KAU9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G396370 PE=4 SV=1) HSP 1 Score: 370.5 bits (950), Expect = 1.2e-99 Identity = 191/191 (100.00%), Postives = 191/191 (100.00%), Query Frame = 1
BLAST of CSPI07G17310 vs. TrEMBL
Match: A0A061DQD9_THECC (TSPO(Outer membrane tryptophan-rich sensory protein)-related OS=Theobroma cacao GN=TCM_004622 PE=4 SV=1) HSP 1 Score: 160.6 bits (405), Expect = 1.9e-36 Identity = 95/199 (47.74%), Postives = 120/199 (60.30%), Query Frame = 1
BLAST of CSPI07G17310 vs. TrEMBL
Match: I0B680_GOSHI (Putative peripheral-type benzodiazepine receptor OS=Gossypium hirsutum PE=2 SV=1) HSP 1 Score: 160.6 bits (405), Expect = 1.9e-36 Identity = 90/191 (47.12%), Postives = 114/191 (59.69%), Query Frame = 1
BLAST of CSPI07G17310 vs. TrEMBL
Match: A0A068U4L8_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00015906001 PE=4 SV=1) HSP 1 Score: 158.3 bits (399), Expect = 9.3e-36 Identity = 90/193 (46.63%), Postives = 121/193 (62.69%), Query Frame = 1
BLAST of CSPI07G17310 vs. TrEMBL
Match: F6HZ32_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0005g00140 PE=4 SV=1) HSP 1 Score: 157.5 bits (397), Expect = 1.6e-35 Identity = 96/190 (50.53%), Postives = 122/190 (64.21%), Query Frame = 1
BLAST of CSPI07G17310 vs. TAIR10
Match: AT2G47770.1 (AT2G47770.1 TSPO(outer membrane tryptophan-rich sensory protein)-related) HSP 1 Score: 138.7 bits (348), Expect = 3.9e-33 Identity = 80/193 (41.45%), Postives = 115/193 (59.59%), Query Frame = 1
BLAST of CSPI07G17310 vs. NCBI nr
Match: gi|449436787|ref|XP_004136174.1| (PREDICTED: translocator protein homolog [Cucumis sativus]) HSP 1 Score: 370.5 bits (950), Expect = 1.7e-99 Identity = 191/191 (100.00%), Postives = 191/191 (100.00%), Query Frame = 1
BLAST of CSPI07G17310 vs. NCBI nr
Match: gi|659101426|ref|XP_008451600.1| (PREDICTED: translocator protein homolog [Cucumis melo]) HSP 1 Score: 342.0 bits (876), Expect = 6.5e-91 Identity = 174/191 (91.10%), Postives = 183/191 (95.81%), Query Frame = 1
BLAST of CSPI07G17310 vs. NCBI nr
Match: gi|590718702|ref|XP_007050872.1| (TSPO(outer membrane tryptophan-rich sensory protein)-related [Theobroma cacao]) HSP 1 Score: 160.6 bits (405), Expect = 2.7e-36 Identity = 95/199 (47.74%), Postives = 120/199 (60.30%), Query Frame = 1
BLAST of CSPI07G17310 vs. NCBI nr
Match: gi|383932366|gb|AFH57280.1| (putative peripheral-type benzodiazepine receptor [Gossypium hirsutum]) HSP 1 Score: 160.6 bits (405), Expect = 2.7e-36 Identity = 90/191 (47.12%), Postives = 114/191 (59.69%), Query Frame = 1
BLAST of CSPI07G17310 vs. NCBI nr
Match: gi|747066078|ref|XP_011079708.1| (PREDICTED: translocator protein homolog [Sesamum indicum]) HSP 1 Score: 159.1 bits (401), Expect = 7.9e-36 Identity = 91/190 (47.89%), Postives = 120/190 (63.16%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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