CmaCh18G006020 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CAGCGATTCGGCAACCGAGTTTTTGCAGAGTCCCACAGCAATTTAGGGAGAGAGAGAGCCGGCGGATATCAGATTCAGTTTCAGTTTCAGTTTCAGCTCCGGAGAAGACAAGATGAACACTGACATTACAGCATCGACCAAGCCGGAGTACCCGGTAATAGATCGGAACCCTCCATTCACCAAAGTCGTCGGCAATTTTGACACTCTCGATTACCTTCGTTTCGTCACCATCACCGGCGTTTCCGTTACCGTCGGCTATCTTTCCGGTGCCAATTTCTTCTTTCTTCTTTTCTTCTTTGTTTCTCTTCCTTTTTCCTTACTAATCTGGAAATGTGTTGTGTTCTTTGCGTTTTAGGGATTAAGCCCGGGATTAGAGGACCGTCAATGGTGACCGGCGGTCTAATTGGACTGATGGGAGGCTTCATGTATGCTTATCAGAACTCGGCCGGTCGGCTTATGGGGTTTTTCCCCAATGAAGGCGAGGTAGCTCGTTACAAGAAATAAGATTGTGCGTTTTAGGGTTTTTTCTTCTTCTGAATTTCGAGTTCTATTTGTGGACATTTTTACGATGTTCTACTTATTAACCATGCGACCGGGTTGTGTCAATAAGCTAAATGAAGCTTCATTCTGTTTCTGTTTTGCTCCTTTTCGTCTAAATGAAATAGTTGAAGACTTCACATGATTCTTTGTTTTTGATCCATAAACAAAGATGCCCGTTAAGGGGTTTGGAGAAATGAACCTTTGTGTAATTTGTATGTCCATTTTTTATTTCCTATGTTAGTTGGTATGGTTAGAATATAATATCTCTTGCCACATTGTCATAAACTCAAGTTGATTTCCAGAGTTTCAGGGTGTAACCAGGAAATTGGCAGTAGTACGCGAGTAGCTTTAAGAGGGAAACAAATGTTCTTTATTATCCAAACAGTATAACAC CAGCGATTCGGCAACCGAGTTTTTGCAGAGTCCCACAGCAATTTAGGGAGAGAGAGAGCCGGCGGATATCAGATTCAGTTTCAGTTTCAGTTTCAGCTCCGGAGAAGACAAGATGAACACTGACATTACAGCATCGACCAAGCCGGAGTACCCGGTAATAGATCGGAACCCTCCATTCACCAAAGTCGTCGGCAATTTTGACACTCTCGATTACCTTCGTTTCGTCACCATCACCGGCGTTTCCGTTACCGTCGGCTATCTTTCCGGGATTAAGCCCGGGATTAGAGGACCGTCAATGGTGACCGGCGGTCTAATTGGACTGATGGGAGGCTTCATGTATGCTTATCAGAACTCGGCCGGTCGGCTTATGGGGTTTTTCCCCAATGAAGGCGAGGTAGCTCGTTACAAGAAATAAGATTGTGCGTTTTAGGGTTTTTTCTTCTTCTGAATTTCGAGTTCTATTTGTGGACATTTTTACGATGTTCTACTTATTAACCATGCGACCGGGTTGTGTCAATAAGCTAAATGAAGCTTCATTCTGTTTCTGTTTTGCTCCTTTTCGTCTAAATGAAATAGTTGAAGACTTCACATGATTCTTTGTTTTTGATCCATAAACAAAGATGCCCGTTAAGGGGTTTGGAGAAATGAACCTTTGTGTAATTTGTATGTCCATTTTTTATTTCCTATGTTAGTTGGTATGGTTAGAATATAATATCTCTTGCCACATTGTCATAAACTCAAGTTGATTTCCAGAGTTTCAGGGTGTAACCAGGAAATTGGCAGTAGTACGCGAGTAGCTTTAAGAGGGAAACAAATGTTCTTTATTATCCAAACAGTATAACAC ATGAACACTGACATTACAGCATCGACCAAGCCGGAGTACCCGGTAATAGATCGGAACCCTCCATTCACCAAAGTCGTCGGCAATTTTGACACTCTCGATTACCTTCGTTTCGTCACCATCACCGGCGTTTCCGTTACCGTCGGCTATCTTTCCGGGATTAAGCCCGGGATTAGAGGACCGTCAATGGTGACCGGCGGTCTAATTGGACTGATGGGAGGCTTCATGTATGCTTATCAGAACTCGGCCGGTCGGCTTATGGGGTTTTTCCCCAATGAAGGCGAGGTAGCTCGTTACAAGAAATAA MNTDITASTKPEYPVIDRNPPFTKVVGNFDTLDYLRFVTITGVSVTVGYLSGIKPGIRGPSMVTGGLIGLMGGFMYAYQNSAGRLMGFFPNEGEVARYKK
BLAST of CmaCh18G006020 vs. TrEMBL
Match: A0A0A0LT27_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G181470 PE=4 SV=1) HSP 1 Score: 203.8 bits (517), Expect = 1.0e-49 Identity = 98/100 (98.00%), Postives = 100/100 (100.00%), Query Frame = 1
BLAST of CmaCh18G006020 vs. TrEMBL
Match: A0A061GID1_THECC (NADH-ubiquinone oxidoreductase 21 kDa subunit OS=Theobroma cacao GN=TCM_030394 PE=4 SV=1) HSP 1 Score: 197.2 bits (500), Expect = 9.5e-48 Identity = 94/100 (94.00%), Postives = 99/100 (99.00%), Query Frame = 1
BLAST of CmaCh18G006020 vs. TrEMBL
Match: A0A151T6J4_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_017204 PE=4 SV=1) HSP 1 Score: 196.4 bits (498), Expect = 1.6e-47 Identity = 95/100 (95.00%), Postives = 98/100 (98.00%), Query Frame = 1
BLAST of CmaCh18G006020 vs. TrEMBL
Match: A0A0B2S936_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_009944 PE=4 SV=1) HSP 1 Score: 196.4 bits (498), Expect = 1.6e-47 Identity = 95/100 (95.00%), Postives = 98/100 (98.00%), Query Frame = 1
BLAST of CmaCh18G006020 vs. TrEMBL
Match: C6SY14_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_09G011900 PE=2 SV=1) HSP 1 Score: 196.4 bits (498), Expect = 1.6e-47 Identity = 95/100 (95.00%), Postives = 98/100 (98.00%), Query Frame = 1
BLAST of CmaCh18G006020 vs. TAIR10
Match: AT4G16450.1 (AT4G16450.1 unknown protein) HSP 1 Score: 181.8 bits (460), Expect = 2.1e-46 Identity = 87/100 (87.00%), Postives = 93/100 (93.00%), Query Frame = 1
BLAST of CmaCh18G006020 vs. NCBI nr
Match: gi|659127257|ref|XP_008463609.1| (PREDICTED: uncharacterized protein LOC103501718 [Cucumis melo]) HSP 1 Score: 204.1 bits (518), Expect = 1.1e-49 Identity = 99/100 (99.00%), Postives = 100/100 (100.00%), Query Frame = 1
BLAST of CmaCh18G006020 vs. NCBI nr
Match: gi|778659743|ref|XP_011654950.1| (PREDICTED: NADH-ubiquinone oxidoreductase 20.9 kDa subunit [Cucumis sativus]) HSP 1 Score: 203.8 bits (517), Expect = 1.4e-49 Identity = 98/100 (98.00%), Postives = 100/100 (100.00%), Query Frame = 1
BLAST of CmaCh18G006020 vs. NCBI nr
Match: gi|700209939|gb|KGN65035.1| (hypothetical protein Csa_1G181470 [Cucumis sativus]) HSP 1 Score: 203.8 bits (517), Expect = 1.4e-49 Identity = 98/100 (98.00%), Postives = 100/100 (100.00%), Query Frame = 1
BLAST of CmaCh18G006020 vs. NCBI nr
Match: gi|590626935|ref|XP_007026310.1| (NADH-ubiquinone oxidoreductase 21 kDa subunit [Theobroma cacao]) HSP 1 Score: 197.2 bits (500), Expect = 1.4e-47 Identity = 94/100 (94.00%), Postives = 99/100 (99.00%), Query Frame = 1
BLAST of CmaCh18G006020 vs. NCBI nr
Match: gi|351720975|ref|NP_001237706.1| (uncharacterized protein LOC100306111 [Glycine max]) HSP 1 Score: 196.4 bits (498), Expect = 2.3e-47 Identity = 95/100 (95.00%), Postives = 98/100 (98.00%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: |