CmaCh13G003840 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh13G003840
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	NADH-ubiquinone oxidoreductase 21 kDa subunit
Location	Cma_Chr13 : 4440372 .. 4442061 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCCCAAACCTTAAACCACACGAATCTCCTAGCTGCCGTTGGAGACATGAGGGCCCAATCCTTCTATGGCTTTGCCATCCTTCTCCAAATGCTCAACGCCACCACCCAACTAACCCTAAGAGACATCACCTTCTTCATCCCCCTTGACCCTCAGCTCTCGAACATCTCAATACCGACCGACCATCTTGAGTCGTTCGTCCTCAGTCATTCGATTGTCATGCCGCTGCAATTCAGTGACTTGATTCGATTTCCCACTGGCTCCATCGTTCCTTCGGGTTATCGTAATAGGATGATCAGAATCCATAACCATGGAAGAGGCCATTTTCTTGTCAATAATGCTGCCGTCACTATTCCTAATGTTTGTTCTAGTTCCGGGGGTATTAAGTGTCATGGGATTGATAAGGTCATTGATTACGGTAATGCTTATGATAATCATAATGTTTAATTTCTAGGGTTATATCTTTGGAATATAGTTTCTTGGAATGAACGTTAGTAGCTAGCTAGTGGTGTCAAATATGGAAACCATCATATAGTTCATTAATAAAAATCAAGGGACCATAATGGTTGATTGCTCAAAACACCCGGCGTGTAATCTACTCACTAAAAATCATTTTCAGCAATCACTTCTCAGTAACCGTTAGTAGTTCGCTATCTGATACACACAACGTGTAACCCTTGCCACAAAAATAATTTTCGACAATCATCTCAAGTGACCATAGGTGGTTAGTTACCCGATACATAATGGGTAACCCTTACCACATTCACTACATTAAAAAATCATAATACGCACATGTGCGATCCCAACACATATATTTTTCATGACTAGTAAGCATAACAAAAAACAACAAACATTCATATAATATCATACACATCCAACCGTCGTTTAGAAAAATAAAACGATTTAGTTTCAATAGGAAGATTCCTTGCCTCGAGTGTTTCCCTTAATCATTACAAATGATATCAGAGTAGTGTCTCTCCCTGTAAGATGTGGTTCGGAGACGAATCAAAGTGGAAGCTGATGGTCACGTGGCACTTGAGTAAACAAGGGATACATGAATGAGCAGGTTCACCCATTTTGTACGATGGGCTATGGCTGATCCAACTATTTTGGGCCCAGCCCATGAAATGCCCGTTTTTCAGTCACCAATCACTTGCGTTCATTTCGTCTCAGACGGCAGCGAGTCGGTAGGCGAATTATTACAGTCACACAACGAGAGAGAGAGCCGGCGGAGGTCAGTTTCAGCACCGGAGAAGACGTGATGAACACTGACATTACAGCTTCGACTAAGCCGGAGTATCCAGTAATAGATCGGAATCCTCCATTTACCAAAGTCGTTGGCAATTTCGACACTCTCGATTACCTCCGTTTCGTCACCATCACCGGCGTTTCAGTCACCGTCGGTTATCTTTCCGGTACCAATCTCTCTCTCTCTCTCTCTTACTTTTCTTCTTTTCTTCTATTCCGTTTCGTTGCTCATCTGGAAATCTGTTCTCCTGTCTTTGCGTTTTAGGGATTAAACCCGGGATTAGGGGTCCGTCAATGGTCACCGGTGGTCTAATTGGGCTGATGGGAGGCTTCATGTATGCTTATCAGAACTCGGCGGGTCGGCTTATGGGATTCTTCCCCAATGAAGGCGAGGTAGCTCGTTATAAGAAATAAGATTGCGCGTTTTCGTGTTCTTTTTTTT

mRNA sequence

ATGTCCCAAACCTTAAACCACACGAATCTCCTAGCTGCCGTTGGAGACATGAGGGCCCAATCCTTCTATGGCTTTGCCATCCTTCTCCAAATGCTCAACGCCACCACCCAACTAACCCTAAGAGACATCACCTTCTTCATCCCCCTTGACCCTCAGCTCTCGAACATCTCAATACCGACCGACCATCTTGAGTCGTTCGTCCTCAGTCATTCGATTGTCATGCCGCTGCAATTCAGTGACTTGATTCGATTTCCCACTGGCTCCATCGTTCCTTCGGGTTATCGTAATAGGATGATCAGAATCCATAACCATGGAAGAGGCCATTTTCTTGTCAATAATGCTGCCGTCACTATTCCTAATGTTTGTTCTAGTTCCGGGGGTATTAAGTGTCATGGGATTGATAAGCGAGTCGGTAGGCGAATTATTACAGTCACACAACGAGAGAGAGAGCCGGCGGAGGTCAGTTTCAGCACCGGAGAAGACGTGATGAACACTGACATTACAGCTTCGACTAAGCCGGAGTATCCAGTAATAGATCGGAATCCTCCATTTACCAAAGTCGTTGGCAATTTCGACACTCTCGATTACCTCCGTTTCGTCACCATCACCGGCGTTTCAGTCACCGTCGGTTATCTTTCCGGGATTAAACCCGGGATTAGGGGTCCGTCAATGGTCACCGGTGGTCTAATTGGGCTGATGGGAGGCTTCATGTATGCTTATCAGAACTCGGCGGGTCGGCTTATGGGATTCTTCCCCAATGAAGGCGAGGTAGCTCGTTATAAGAAATAAGATTGCGCGTTTTCGTGTTCTTTTTTTT

Coding sequence (CDS)

ATGTCCCAAACCTTAAACCACACGAATCTCCTAGCTGCCGTTGGAGACATGAGGGCCCAATCCTTCTATGGCTTTGCCATCCTTCTCCAAATGCTCAACGCCACCACCCAACTAACCCTAAGAGACATCACCTTCTTCATCCCCCTTGACCCTCAGCTCTCGAACATCTCAATACCGACCGACCATCTTGAGTCGTTCGTCCTCAGTCATTCGATTGTCATGCCGCTGCAATTCAGTGACTTGATTCGATTTCCCACTGGCTCCATCGTTCCTTCGGGTTATCGTAATAGGATGATCAGAATCCATAACCATGGAAGAGGCCATTTTCTTGTCAATAATGCTGCCGTCACTATTCCTAATGTTTGTTCTAGTTCCGGGGGTATTAAGTGTCATGGGATTGATAAGCGAGTCGGTAGGCGAATTATTACAGTCACACAACGAGAGAGAGAGCCGGCGGAGGTCAGTTTCAGCACCGGAGAAGACGTGATGAACACTGACATTACAGCTTCGACTAAGCCGGAGTATCCAGTAATAGATCGGAATCCTCCATTTACCAAAGTCGTTGGCAATTTCGACACTCTCGATTACCTCCGTTTCGTCACCATCACCGGCGTTTCAGTCACCGTCGGTTATCTTTCCGGGATTAAACCCGGGATTAGGGGTCCGTCAATGGTCACCGGTGGTCTAATTGGGCTGATGGGAGGCTTCATGTATGCTTATCAGAACTCGGCGGGTCGGCTTATGGGATTCTTCCCCAATGAAGGCGAGGTAGCTCGTTATAAGAAATAA

Protein sequence

MSQTLNHTNLLAAVGDMRAQSFYGFAILLQMLNATTQLTLRDITFFIPLDPQLSNISIPTDHLESFVLSHSIVMPLQFSDLIRFPTGSIVPSGYRNRMIRIHNHGRGHFLVNNAAVTIPNVCSSSGGIKCHGIDKRVGRRIITVTQREREPAEVSFSTGEDVMNTDITASTKPEYPVIDRNPPFTKVVGNFDTLDYLRFVTITGVSVTVGYLSGIKPGIRGPSMVTGGLIGLMGGFMYAYQNSAGRLMGFFPNEGEVARYKK

Homology

[Close]

BLAST of CmaCh13G003840 vs. Swiss-Prot
Match: Y4891_SELML (FAS1 domain-containing protein SELMODRAFT_448915 OS=Selaginella moellendorffii GN=SELMODRAFT_448915 PE=2 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 6.1e-07
Identity = 36/124 (29.03%), Postives = 64/124 (51.61%), Query Frame = 1


Query: 14  VGDMRAQSFYGFAILLQMLNATTQLTLRDITFFIPLDPQLSNI--SIPTDHLESFVLSHS 73
           V +M  Q F   A + Q L   T + +R  T  IP +  ++ +  ++  + + + +  H 
Sbjct: 76  VSNMIGQGFTVAAAVAQSLQ--TLIPIRS-TLLIPSNNAIAGVDANLSQEDIINTLQYHV 135

Query: 74  IVMPLQFSDLIRFPTGSIVPSGYRNRMIRIHNHGRGHFLVNNAAVTIPNVCSSSGGIKCH 133
           +  P  F  L R   G+ +P+  +  MI + ++  G+F +N   +T P+VCSS+  I CH
Sbjct: 136 LTFPTSFEALSRNDVGAELPTMLQGEMITVTSNSPGNFTLNEVNITHPDVCSSTRFIACH 195

Query: 134 GIDK 136
           GID+
Sbjct: 196 GIDR 196

[Close]

BLAST of CmaCh13G003840 vs. TrEMBL
Match: A0A0A0LT27_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G181470 PE=4 SV=1)

HSP 1 Score: 219.9 bits (559), Expect = 3.6e-54
Identity = 112/134 (83.58%), Postives = 120/134 (89.55%), Query Frame = 1


Query: 131 HGIDKRVGRRIITVTQRER-EPAEVS-FSTGEDVMNTDITASTKPEYPVIDRNPPFTKVV 190
           H +D+   +R+   + RER   AE+S FS GED MNTDITASTKPEYPV+DRNPPFTKVV
Sbjct: 12  HSLDRLQPQRVGQASFRERGRAAEISSFSYGEDKMNTDITASTKPEYPVVDRNPPFTKVV 71

Query: 191 GNFDTLDYLRFVTITGVSVTVGYLSGIKPGIRGPSMVTGGLIGLMGGFMYAYQNSAGRLM 250
           GNFDTLDYLRFVTITGVSVTVGYLSGIKPGIRGPSMVTGGLIGLMGGFMYAYQNSAGRLM
Sbjct: 72  GNFDTLDYLRFVTITGVSVTVGYLSGIKPGIRGPSMVTGGLIGLMGGFMYAYQNSAGRLM 131

Query: 251 GFFPNEGEVARYKK 263
           GFFPN+GEVARYKK
Sbjct: 132 GFFPNDGEVARYKK 145

[Close]

BLAST of CmaCh13G003840 vs. TrEMBL
Match: A0A061GID1_THECC (NADH-ubiquinone oxidoreductase 21 kDa subunit OS=Theobroma cacao GN=TCM_030394 PE=4 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 3.2e-47
Identity = 94/100 (94.00%), Postives = 99/100 (99.00%), Query Frame = 1


Query: 163 MNTDITASTKPEYPVIDRNPPFTKVVGNFDTLDYLRFVTITGVSVTVGYLSGIKPGIRGP 222
           MNTDITAS KPEYPVIDRNPPFTKVVGNF+TLDYLRFVT+TGVSVTVGYLSGIKPG++GP
Sbjct: 1   MNTDITASAKPEYPVIDRNPPFTKVVGNFNTLDYLRFVTLTGVSVTVGYLSGIKPGLKGP 60

Query: 223 SMVTGGLIGLMGGFMYAYQNSAGRLMGFFPNEGEVARYKK 263
           SMVTGGLIGLMGGFMYAYQNSAGRLMGFFPNEGEVARY+K
Sbjct: 61  SMVTGGLIGLMGGFMYAYQNSAGRLMGFFPNEGEVARYQK 100

[Close]

BLAST of CmaCh13G003840 vs. TrEMBL
Match: A0A0B2S936_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_009944 PE=4 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 5.5e-47
Identity = 95/100 (95.00%), Postives = 98/100 (98.00%), Query Frame = 1


Query: 163 MNTDITASTKPEYPVIDRNPPFTKVVGNFDTLDYLRFVTITGVSVTVGYLSGIKPGIRGP 222
           MNTDITASTKPEYPVIDRNPPFTKVVGNF+TLDYLRFVTITGVSVTVGYLSGIKPGIRGP
Sbjct: 1   MNTDITASTKPEYPVIDRNPPFTKVVGNFNTLDYLRFVTITGVSVTVGYLSGIKPGIRGP 60

Query: 223 SMVTGGLIGLMGGFMYAYQNSAGRLMGFFPNEGEVARYKK 263
           SMVTGGLIG+MGGFMYAYQNSAGRLMGFFPN+ EVARY K
Sbjct: 61  SMVTGGLIGVMGGFMYAYQNSAGRLMGFFPNDDEVARYNK 100

[Close]

BLAST of CmaCh13G003840 vs. TrEMBL
Match: C6SY14_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_09G011900 PE=2 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 5.5e-47
Identity = 95/100 (95.00%), Postives = 98/100 (98.00%), Query Frame = 1


Query: 163 MNTDITASTKPEYPVIDRNPPFTKVVGNFDTLDYLRFVTITGVSVTVGYLSGIKPGIRGP 222
           MNTDITASTKPEYPVIDRNPPFTKVVGNF+TLDYLRFVTITGVSVTVGYLSGIKPGIRGP
Sbjct: 1   MNTDITASTKPEYPVIDRNPPFTKVVGNFNTLDYLRFVTITGVSVTVGYLSGIKPGIRGP 60

Query: 223 SMVTGGLIGLMGGFMYAYQNSAGRLMGFFPNEGEVARYKK 263
           SMVTGGLIG+MGGFMYAYQNSAGRLMGFFPN+ EVARY K
Sbjct: 61  SMVTGGLIGVMGGFMYAYQNSAGRLMGFFPNDDEVARYNK 100

[Close]

BLAST of CmaCh13G003840 vs. TrEMBL
Match: A0A151T6J4_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_017204 PE=4 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 5.5e-47
Identity = 95/100 (95.00%), Postives = 98/100 (98.00%), Query Frame = 1


Query: 163 MNTDITASTKPEYPVIDRNPPFTKVVGNFDTLDYLRFVTITGVSVTVGYLSGIKPGIRGP 222
           MNTDITASTKPEYPVIDRNPPFTKVVGNF+TLDYLRFVTITGVSVTVGYLSGIKPGIRGP
Sbjct: 1   MNTDITASTKPEYPVIDRNPPFTKVVGNFNTLDYLRFVTITGVSVTVGYLSGIKPGIRGP 60

Query: 223 SMVTGGLIGLMGGFMYAYQNSAGRLMGFFPNEGEVARYKK 263
           SMVTGGLIG+MGGFMYAYQNSAGRLMGFFPN+ EVARY K
Sbjct: 61  SMVTGGLIGVMGGFMYAYQNSAGRLMGFFPNDDEVARYNK 100

[Close]

BLAST of CmaCh13G003840 vs. TAIR10
Match: AT4G16450.1 (AT4G16450.1 unknown protein)

HSP 1 Score: 181.4 bits (459), Expect = 7.1e-46
Identity = 87/100 (87.00%), Postives = 93/100 (93.00%), Query Frame = 1


Query: 163 MNTDITASTKPEYPVIDRNPPFTKVVGNFDTLDYLRFVTITGVSVTVGYLSGIKPGIRGP 222
           MNTDITA  K +YPV+DRNP FTKVVGNF TLDYLRF TITG+SVTVGYLSGIKPGI+GP
Sbjct: 1   MNTDITALEKAQYPVVDRNPAFTKVVGNFSTLDYLRFSTITGISVTVGYLSGIKPGIKGP 60

Query: 223 SMVTGGLIGLMGGFMYAYQNSAGRLMGFFPNEGEVARYKK 263
           SMVTGGLIGLMGGFMYAYQNSAGRLMGFFPN+GEVA Y+K
Sbjct: 61  SMVTGGLIGLMGGFMYAYQNSAGRLMGFFPNDGEVASYQK 100

[Close]

BLAST of CmaCh13G003840 vs. TAIR10
Match: AT5G26730.1 (AT5G26730.1 Fasciclin-like arabinogalactan family protein)

HSP 1 Score: 105.1 bits (261), Expect = 6.5e-23
Identity = 54/128 (42.19%), Postives = 76/128 (59.38%), Query Frame = 1


Query: 6   NHTNLLAAVGDMRAQSFYGFAILLQMLNATTQLTLRDITFFIPLDPQLSNISIPTDHLES 65
           N T+L++A+ DMR QS+ GF ILL+ LN T      DITF +P D  +S+  I  + LE+
Sbjct: 114 NQTDLISAMTDMRRQSYNGFVILLRFLNDTNYFRNTDITFLMPSDNDISHADITPESLET 173

Query: 66  FVLSHSIVMPLQFSDLIRFPTGSIVPSGYRNRMIRIHNHGRGHFLVNNAAVTIPNVCSSS 125
           F+L H+I   L  + ++ FP  ++VP  + +RM  I   G     VNNA +  PNVC +S
Sbjct: 174 FILKHTIPAWLMINHMLHFPNRTLVPCSFSDRMFTITKSGGSGIYVNNARIVTPNVCQNS 233

Query: 126 GGIKCHGI 134
             I CHGI
Sbjct: 234 -RISCHGI 240

[Close]

BLAST of CmaCh13G003840 vs. NCBI nr
Match: gi|778665017|ref|XP_011648466.1| (PREDICTED: FAS1 domain-containing protein SELMODRAFT_448915-like [Cucumis sativus])

HSP 1 Score: 220.7 bits (561), Expect = 3.0e-54
Identity = 107/134 (79.85%), Postives = 120/134 (89.55%), Query Frame = 1


Query: 2   SQTLNHTNLLAAVGDMRAQSFYGFAILLQMLNATTQLTLRDITFFIPLDPQLSNISIPTD 61
           SQT N T+L AA+ DM+AQSFYGFAILLQMLN TTQLTL++ITFFIP DPQ+SNISI  D
Sbjct: 29  SQTSNKTDLQAAIEDMKAQSFYGFAILLQMLNITTQLTLKEITFFIPQDPQISNISIAVD 88

Query: 62  HLESFVLSHSIVMPLQFSDLIRFPTGSIVPSGYRNRMIRIHNHGRGHFLVNNAAVTIPNV 121
            LE+FVLSH I+MPLQFSDLIRFPTGSIVPSGY NRMIRIHN+GRGHF+VNNA V +PNV
Sbjct: 89  RLEAFVLSHMILMPLQFSDLIRFPTGSIVPSGYHNRMIRIHNNGRGHFVVNNAVVNVPNV 148

Query: 122 CSSSGGIKCHGIDK 136
           CSSS GIKCHG++K
Sbjct: 149 CSSSLGIKCHGVNK 162

[Close]

BLAST of CmaCh13G003840 vs. NCBI nr
Match: gi|659127255|ref|XP_008463608.1| (PREDICTED: FAS1 domain-containing protein SELMODRAFT_448915-like [Cucumis melo])

HSP 1 Score: 220.3 bits (560), Expect = 3.9e-54
Identity = 108/134 (80.60%), Postives = 120/134 (89.55%), Query Frame = 1


Query: 2   SQTLNHTNLLAAVGDMRAQSFYGFAILLQMLNATTQLTLRDITFFIPLDPQLSNISIPTD 61
           SQT N T+L AA+ DM+AQSFYGFAILLQMLN TTQLTL++ITFFIP D QLSNISI  +
Sbjct: 23  SQTSNKTDLQAAIEDMKAQSFYGFAILLQMLNITTQLTLKEITFFIPQDSQLSNISIAVN 82

Query: 62  HLESFVLSHSIVMPLQFSDLIRFPTGSIVPSGYRNRMIRIHNHGRGHFLVNNAAVTIPNV 121
           HLE+FVLSH IVMPLQFSDLIRFPTGSIVPSGY NRMIRIHN+GRGHF+VNNA V +PNV
Sbjct: 83  HLEAFVLSHLIVMPLQFSDLIRFPTGSIVPSGYHNRMIRIHNNGRGHFVVNNAVVNVPNV 142

Query: 122 CSSSGGIKCHGIDK 136
           CSSS GIKCHG++K
Sbjct: 143 CSSSLGIKCHGVNK 156

[Close]

BLAST of CmaCh13G003840 vs. NCBI nr
Match: gi|700209939|gb|KGN65035.1| (hypothetical protein Csa_1G181470 [Cucumis sativus])

HSP 1 Score: 219.9 bits (559), Expect = 5.1e-54
Identity = 112/134 (83.58%), Postives = 120/134 (89.55%), Query Frame = 1


Query: 131 HGIDKRVGRRIITVTQRER-EPAEVS-FSTGEDVMNTDITASTKPEYPVIDRNPPFTKVV 190
           H +D+   +R+   + RER   AE+S FS GED MNTDITASTKPEYPV+DRNPPFTKVV
Sbjct: 12  HSLDRLQPQRVGQASFRERGRAAEISSFSYGEDKMNTDITASTKPEYPVVDRNPPFTKVV 71

Query: 191 GNFDTLDYLRFVTITGVSVTVGYLSGIKPGIRGPSMVTGGLIGLMGGFMYAYQNSAGRLM 250
           GNFDTLDYLRFVTITGVSVTVGYLSGIKPGIRGPSMVTGGLIGLMGGFMYAYQNSAGRLM
Sbjct: 72  GNFDTLDYLRFVTITGVSVTVGYLSGIKPGIRGPSMVTGGLIGLMGGFMYAYQNSAGRLM 131

Query: 251 GFFPNEGEVARYKK 263
           GFFPN+GEVARYKK
Sbjct: 132 GFFPNDGEVARYKK 145

[Close]

BLAST of CmaCh13G003840 vs. NCBI nr
Match: gi|659127257|ref|XP_008463609.1| (PREDICTED: uncharacterized protein LOC103501718 [Cucumis melo])

HSP 1 Score: 203.8 bits (517), Expect = 3.8e-49
Identity = 99/100 (99.00%), Postives = 100/100 (100.00%), Query Frame = 1


Query: 163 MNTDITASTKPEYPVIDRNPPFTKVVGNFDTLDYLRFVTITGVSVTVGYLSGIKPGIRGP 222
           MNTDITASTKPEYPVIDRNPPFTKVVGNFDTLDYLRFVTITGVSVTVGYLSGIKPGIRGP
Sbjct: 1   MNTDITASTKPEYPVIDRNPPFTKVVGNFDTLDYLRFVTITGVSVTVGYLSGIKPGIRGP 60

Query: 223 SMVTGGLIGLMGGFMYAYQNSAGRLMGFFPNEGEVARYKK 263
           SMVTGGLIGLMGGFMYAYQNSAGRLMGFFPN+GEVARYKK
Sbjct: 61  SMVTGGLIGLMGGFMYAYQNSAGRLMGFFPNDGEVARYKK 100

[Close]

BLAST of CmaCh13G003840 vs. NCBI nr
Match: gi|778659743|ref|XP_011654950.1| (PREDICTED: NADH-ubiquinone oxidoreductase 20.9 kDa subunit [Cucumis sativus])

HSP 1 Score: 203.4 bits (516), Expect = 5.0e-49
Identity = 98/100 (98.00%), Postives = 100/100 (100.00%), Query Frame = 1


Query: 163 MNTDITASTKPEYPVIDRNPPFTKVVGNFDTLDYLRFVTITGVSVTVGYLSGIKPGIRGP 222
           MNTDITASTKPEYPV+DRNPPFTKVVGNFDTLDYLRFVTITGVSVTVGYLSGIKPGIRGP
Sbjct: 1   MNTDITASTKPEYPVVDRNPPFTKVVGNFDTLDYLRFVTITGVSVTVGYLSGIKPGIRGP 60

Query: 223 SMVTGGLIGLMGGFMYAYQNSAGRLMGFFPNEGEVARYKK 263
           SMVTGGLIGLMGGFMYAYQNSAGRLMGFFPN+GEVARYKK
Sbjct: 61  SMVTGGLIGLMGGFMYAYQNSAGRLMGFFPNDGEVARYKK 100

The following BLAST results are available for this feature:

BLAST of CmaCh13G003840 vs. Swiss-Prot


Match Name	E-value	Identity	Description
Y4891_SELML	6.1e-07	29.03	FAS1 domain-containing protein SELMODRAFT_448915 OS=Selaginella moellendorffii G...	[more]

BLAST of CmaCh13G003840 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LT27_CUCSA	3.6e-54	83.58	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G181470 PE=4 SV=1	[more]
A0A061GID1_THECC	3.2e-47	94.00	NADH-ubiquinone oxidoreductase 21 kDa subunit OS=Theobroma cacao GN=TCM_030394 P...	[more]
A0A0B2S936_GLYSO	5.5e-47	95.00	Uncharacterized protein OS=Glycine soja GN=glysoja_009944 PE=4 SV=1	[more]
C6SY14_SOYBN	5.5e-47	95.00	Uncharacterized protein OS=Glycine max GN=GLYMA_09G011900 PE=2 SV=1	[more]
A0A151T6J4_CAJCA	5.5e-47	95.00	Uncharacterized protein OS=Cajanus cajan GN=KK1_017204 PE=4 SV=1	[more]

BLAST of CmaCh13G003840 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G16450.1	7.1e-46	87.00	unknown protein	[more]
AT5G26730.1	6.5e-23	42.19	Fasciclin-like arabinogalactan family protein	[more]

BLAST of CmaCh13G003840 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778665017\|ref\|XP_011648466.1\|	3.0e-54	79.85	PREDICTED: FAS1 domain-containing protein SELMODRAFT_448915-like [Cucumis sativu...	[more]
gi\|659127255\|ref\|XP_008463608.1\|	3.9e-54	80.60	PREDICTED: FAS1 domain-containing protein SELMODRAFT_448915-like [Cucumis melo]	[more]
gi\|700209939\|gb\|KGN65035.1\|	5.1e-54	83.58	hypothetical protein Csa_1G181470 [Cucumis sativus]	[more]
gi\|659127257\|ref\|XP_008463609.1\|	3.8e-49	99.00	PREDICTED: uncharacterized protein LOC103501718 [Cucumis melo]	[more]
gi\|778659743\|ref\|XP_011654950.1\|	5.0e-49	98.00	PREDICTED: NADH-ubiquinone oxidoreductase 20.9 kDa subunit [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR000782	FAS1_domain
IPR019721	NADH-UbQ_OxRdtase_su21_N

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005747	mitochondrial respiratory chain complex I
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh13G003840.1	CmaCh13G003840.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000782	FAS1 domain	unknown	SSF82153	FAS1 domain	coord: 22..135 score: 1.3
IPR019721	NADH-ubiquinone oxidoreductase, 21kDa subunit, N-terminal	PFAM	PF10785	NADH-u_ox-rdase	coord: 173..251 score: 2.9
None	No IPR available	PANTHER	PTHR34062	FAMILY NOT NAMED	coord: 155..260 score: 2.0
None	No IPR available	PANTHER	PTHR34062:SF1	SUBFAMILY NOT NAMED	coord: 155..260 score: 2.0

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh13G003840	Cucsa.180500	Cucumber (Gy14) v1	cgycmaB0513
CmaCh13G003840	Cla009044	Watermelon (97103) v1	cmawmB197
CmaCh13G003840	Csa1G181470	Cucumber (Chinese Long) v2	cmacuB223
CmaCh13G003840	MELO3C025540	Melon (DHL92) v3.5.1	cmameB199
CmaCh13G003840	ClCG01G010630	Watermelon (Charleston Gray)	cmawcgB182
CmaCh13G003840	CSPI01G15750	Wild cucumber (PI 183967)	cmacpiB224
CmaCh13G003840	CmoCh18G005910	Cucurbita moschata (Rifu)	cmacmoB223
CmaCh13G003840	CmoCh13G004090	Cucurbita moschata (Rifu)	cmacmoB218
CmaCh13G003840	Lsi02G011260	Bottle gourd (USVL1VR-Ls)	cmalsiB205
CmaCh13G003840	Cp4.1LG09g06510	Cucurbita pepo (Zucchini)	cmacpeB215
CmaCh13G003840	Cp4.1LG20g06590	Cucurbita pepo (Zucchini)	cmacpeB234
CmaCh13G003840	MELO3C025540.2	Melon (DHL92) v3.6.1	cmamedB216
CmaCh13G003840	CsaV3_UNG053450	Cucumber (Chinese Long) v3	cmacucB0268
CmaCh13G003840	CsaV3_1G017030	Cucumber (Chinese Long) v3	cmacucB0255
CmaCh13G003840	Cla97C01G010420	Watermelon (97103) v2	cmawmbB210
CmaCh13G003840	CsGy1G015450	Cucumber (Gy14) v2	cgybcmaB068
CmaCh13G003840	Carg25113	Silver-seed gourd	carcmaB1435
CmaCh13G003840	Carg25611	Silver-seed gourd	carcmaB0059

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh13G003840	CmaCh18G006020	Cucurbita maxima (Rimu)	cmacmaB212

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh13G003840	Wax gourd	cmawgoB0260
CmaCh13G003840	Wax gourd	cmawgoB0275
CmaCh13G003840	Wax gourd	cmawgoB0276
CmaCh13G003840	Cucurbita maxima (Rimu)	cmacmaB216
CmaCh13G003840	Cucurbita maxima (Rimu)	cmacmaB233
CmaCh13G003840	Cucurbita moschata (Rifu)	cmacmoB222
CmaCh13G003840	Wild cucumber (PI 183967)	cmacpiB212
CmaCh13G003840	Cucumber (Chinese Long) v2	cmacuB210
CmaCh13G003840	Watermelon (Charleston Gray)	cmawcgB186
CmaCh13G003840	Watermelon (97103) v1	cmawmB205
CmaCh13G003840	Cucurbita pepo (Zucchini)	cmacpeB212
CmaCh13G003840	Cucurbita pepo (Zucchini)	cmacpeB218
CmaCh13G003840	Bottle gourd (USVL1VR-Ls)	cmalsiB207
CmaCh13G003840	Cucumber (Gy14) v2	cgybcmaB080
CmaCh13G003840	Cucumber (Gy14) v2	cgybcmaB724
CmaCh13G003840	Silver-seed gourd	carcmaB0559
CmaCh13G003840	Cucumber (Chinese Long) v3	cmacucB0241
CmaCh13G003840	Watermelon (97103) v2	cmawmbB213