CmaCh03G010400 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh03G010400
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionRPM1-interacting protein 4 (RIN4) family protein
LocationCma_Chr03 : 7211038 .. 7215827 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AAGAATCTAAACCATTGTACTAAAATGGTTTTTTAATGTTACACGAAGGAAGAAACGACGTCGTTCGGGATAAGGTCAATGATCCAATCCACGCAAGGCGCGTAAGCGGCATGATAAATATATATTTTATTCCGTGTGCGGCTAAACATACAACTGTAAAAGCCTGAGAGCCAGCGATGGCCACACTGAAACAGCCAAGATTAGTGCTCGAGTGGCATAGTCGTAATATTGTGCACGCGAGAGCCCCATTATCGTCTATTCGGAGGACGTATATAGACTCAACACAGGCTTCCACTCTTTTTTTTATTTCTTGTGTTCTTGCCCGGTGATTCTTCTTCGATTCTGCTCTAAGCTTTCACTCGCAATCCTCTTTGCAGAGTACAAAACTCGAACTCTCCTCTTGCAGCTTGAAGCGTCTTCTCGTCCGGCGTTATTTTCTGTGTTGTGAAGTGAGAATTTGCAGTCGATACCATGGACGATCGGAAGGAGGTCGTTTTTTTCTCTGTTTTTTTCGCCCTGCTGCTTGTGTGATTTGCTTGCTCTGTTTTTTTTTTTTTTTTTTTTTTTTTGGATATTTGTTTCCGTTGAGAAGCGTAGGGTTTCGTTTTGTACTTTTCGTTCTTTGCTAGTGATAGAGAGGAAATGCATAAATTTCTTGATCTGAGTTGAAATGTTTAGCGGGACTCTTGAAGAGGTGAGATTGTCGTCTCTTTGGTGTTTGACCTCGCCTAATGAAAACAATCGTAGCAGCATTAGAATTTCGTTATTATTAGTAAGTTTTTTTTTGGTCAAACTGTGAGTAAAACGTTGCTCTCTTATTCGTTCTTTTGAGCGGAATCATCGCTGTTTTCGTGGCATTTCATCTTGCACATGCACTGGTATTACCATTTTCCTCTTCGAAATTTGAGATTTTCTTTTTCTTTTTCCTTATATTTCCACCTTTTCCGGTCGAAATTTCTCACATTGCTTTTAAATTTCCGAAACGTAATTTGATTAGTTCTCTAGCTTGGTTGGATTTTGACGTCTTTATTTTGTCACGGGAGAAATTAGCGAATTGCTTTTGCTTTTTAACCGTTTATGATTAATTCACGGAGGCAATCATGTTACTTTTTCTAAGCTGGGAAGCAGTCAATCCTGTCAACTTTTTCTTCCATCCTCTTGCCAATTATTTTCCTATGGTTCCATAATTTCAACGCTTTAGCCGATAGGTTTCCTTCAGTTGCTCTTCTATTTCGACCATTGACTTTTTGTTTATTTATATATATATATATAGATTTTAGCATGTTCTGAAGACTGAAAAATAAAATTTCAGAGAAATTGCTGTCGCTGACTTTGAAAGTGGGAAAACTTATCCAATTAAATACTCTCCACACATAACGAATCGTATAGTTATTTGATTTACAAGAGAAACTTACTTTTTGGCCGAGTAATAAATTAGACAAGGTGAGGTTACTGTGCAAATCTCTGATATGGCGTGTGCTAGCTGACATTAAATATGTTAGTTTTAGAAAATTGAGAAGCTTTGGAGTTTTTAATTGATGTTGTTTTAATAATTTAATTCTTAAATGTAACTTACATTCTTGGCTTCAACTTAAAGATACGATACTTTTTATTTTCTACAGAAAACTGCTCCATGGCTTTCAGTGCCACAGTTTGGAGACTGGGACCAGAAGGGACAGATGCCTGACTACTCTCTTGATTTCTCAAAAATTAGGGAAAATAGGAAACAGAACAAGAGAGACGTGTCTCGAGCGAGTCTTGGAAATGAAGAGGAGCTCATTGCCTCAGCTGCGCCTCCAACCACAACGGACTCTTTCCCAACTGATAACCATCACCCCTATCATCAGAGTCATCATTCTCCACCAGTAAGATTCTCGCTTCTCCTCCCTAGATTTGATATTCGTAACTTTTTGATGTCTGATAGGGACTTGCATGTTCTTCTAAACAAATACCGTTTGGACAACTCAAGAATTTGTTGGCTTGGGTTGGGTTATATCAATGTGTTGTATGTGCCTGGAAAGTTCTTTATCAAACTTGTGGGTCCATGCTGCCTGCTATTATTTATTAACTTGTGGGCACAGCTATTGATTGTGGAAAAGTCAATACAAACCTAAAAGTCACAATGTCCATAGGAATACTTTCCGAAAGTGTCATCTAATTTTATGATGAATAGGCTAATGAAAGTTTTAATATTAGATCTCCTACCCTCAATGCTCTAGGATGTGGTAAATGTTAGTTACATATATATATTGAAAAAAGATCTCAGATACCAGTCATATTTTCAGTCTTATATATTTTTTTGATGATCACAACTCTTCCTATCCATAGCATCGTGGCATTGAAATTTAGTCAACTTGGTTCTTTGTTTAATTTCCAGGGTTAACCATTGGTGTTACTGTTTGAATTACTTAGAGGTTATCTCTTATATTGGTGACGTGAAACGTACATTGATGTCTGCATAGAAACTAGATCAAACAAGCTGCAGTGTTTTAGAAGAGAATTCTCATCTACTATTTGTTAATGTTAATCATGTCCGTTATGTTACACCTATGCCTTGTTTCAGGGCATAAAATTTAAACAAGAATTATAAAACTAATCGATGATTGGAAAAAGATAAATAAATTGTTTAAGAAGCTGAATGCATTTTTTTCATCGTGTCAGTCCAGTTGAAGGGGAATTTTAGATGATCCATTAGCATACATAAATAACTAATAAACATTTACAGGTCGTGAGTCTTGTCCATCGTTTAGATTTTATGCAGGCAGTGTGTATTGTTCAATTAGGATGAGGTGAGATGTTGACTTAAGGTTATTGGTGGAAACAAGTTTGGGGCGGGGTCCCCCTCGCACCTAGCCCACTAGAAAATATTAGTTGTGGGCATTCATGTGGTGTATGTTGCCACATCTCTCAAAGATTGAAATCGGGGGAATAAATCCTATCACATATTAAGGAACGGCCAGAAAGGTTTTCTTTTCTTAATATGGGGAAGGGGAAGAAAAGCACATTTTTCCTACTAAGGACAGATTCTAGCTTATGTCAACGTCCATTTTTGTTTTAGTTCTTTTTAGATTAGCTGTAAATGGCGGTTGAGAAATTTTCAGGTGTGTTGGTTTATTATGGTTGACCGACTTCCTGTGACCTTCAGATGTGTAGTCTCACATATAATTTCTTGGTTTAATTGAAGGGGATGATGATTATATTTTGGACGGTCAGCCACAATATGACATTTAACTCAGATAATTTCTGGATCACTCTCAGTATATGCTTCGTATATGTTTTATTGCATTAAACAAGAACAGTTAACCACAGCACCGCATTAATTGCTTTGGACAAATCAACTTCTAAATCAAAATAGATGAGATGCTGGTTGGCTTGCCTAGTCAGATATAGAATGAAAATAATTGAATGCATTTTATGATCCTATTTATTTAATTGTCGGTTGAAGTTATGTTTTAGATTTTAATTGGACTGAGCATTTAGATATTTTACGTGGTTAGAAGTATGCTTTCATGTTAACTTTGTCTGCATTACAAATTAGTCAAACTAGTGAATAACTTGGTTCATATTATACCCTTTACCAAAAAAAAAAAAAAGAATTCAGTTCATATTACAACGGGTTTCATAGTTTAACCTCTTCTTTGGTCTTGGGTATTGTAATGAATCAATGAATGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACGGAGGACTTGATATTGTTGATCCATTCGGAATTAATGTTTAAGGGTGTAGGGTGCTTGGTTGTCTTAGCTTATTAAGTCTAGGGTTGAAGAACTTCAGTCTATGTTACTGTTGTTTGTGTCTTGACTTCGCAAACGAATGGCTTTGTGAAGTCTGTCTATCTAATGTATATGTTTGGATTGTGCAAAGAAGTGAGTTTGTTAATATTGAAGTTCTGTAAGTTATGCTTGGGAGGGTGGTTTTGAGATTTGAAAAGGTTAATTTGAAAATCTATTTTTTTATTATTTGGCACGTAAAAATGTAAAATTAAAATAAATTGCATGAAATTTTTCTTAACATTTTGCTTGATAGGTTAGTGGGTAACATTATCCAGAGTGAAGGAAGTACTTTTGTAGTATCACTGACAGCTATCAAGCTCATCTCATCCAAGAGGATTAAAAAATTGTGAGGTGGGGGAACGTTAGGAATTACGACTCTCCACAATAGTATGATATTGTCCACTTTGATCATAAGCTCTCATGGCCTTACTTTGGGCTTTCCCAAAAGGTTTCATACCAATGGAGATAGTATTCCTTCCTTATAAACCCATGATCTTCCACCAAATTAATGAACTCACTCCCAATAATTCTCAACAGGGAAGTGTGAGCGTAAGAGGGAAAGGAAGGTCTTTCCCAATCCGTCTCGGGGTATTTTGTAGTAAAACCATGGATTAGTTCAATGGTATTGAACTTGTATAAAGTTGTAAAATGGGTGGACAAGCTTCCAGCTCATGGGATTGGGGTTCTTACCAAAATCTGAATATGGAGGTTCAAACTTGTTTGAACTAATGTACTTTCTTTTTAAATTCTATTTAGGTATGCGATCTTAGCTAAATTGTACAAAATAATTGGACGAGTATGGAAAAGTGTGTCTATTTTTTTTTTTATTATTCTTACACGTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTTTTTTTGTTGATTTGCCAGACGAGAAAGAGCATTCTAAGCTGCTTCAACTGCTGCTTGAAAGCTTGA

mRNA sequence

AAGAATCTAAACCATTGTACTAAAATGGTTTTTTAATGTTACACGAAGGAAGAAACGACGTCGTTCGGGATAAGGTCAATGATCCAATCCACGCAAGGCGCGTAAGCGGCATGATAAATATATATTTTATTCCGTGTGCGGCTAAACATACAACTGTAAAAGCCTGAGAGCCAGCGATGGCCACACTGAAACAGCCAAGATTAGTGCTCGAGTGGCATAGTCGTAATATTGTGCACGCGAGAGCCCCATTATCGTCTATTCGGAGGACGTATATAGACTCAACACAGGCTTCCACTCTTTTTTTTATTTCTTGTGTTCTTGCCCGGTGATTCTTCTTCGATTCTGCTCTAAGCTTTCACTCGCAATCCTCTTTGCAGAGTACAAAACTCGAACTCTCCTCTTGCAGCTTGAAGCGTCTTCTCGTCCGGCGTTATTTTCTGTGTTGTGAAGTGAGAATTTGCAGTCGATACCATGGACGATCGGAAGGAGAAAACTGCTCCATGGCTTTCAGTGCCACAGTTTGGAGACTGGGACCAGAAGGGACAGATGCCTGACTACTCTCTTGATTTCTCAAAAATTAGGGAAAATAGGAAACAGAACAAGAGAGACGTGTCTCGAGCGAGTCTTGGAAATGAAGAGGAGCTCATTGCCTCAGCTGCGCCTCCAACCACAACGGACTCTTTCCCAACTGATAACCATCACCCCTATCATCAGAGTCATCATTCTCCACCAACGAGAAAGAGCATTCTAAGCTGCTTCAACTGCTGCTTGAAAGCTTGA

Coding sequence (CDS)

ATGGACGATCGGAAGGAGAAAACTGCTCCATGGCTTTCAGTGCCACAGTTTGGAGACTGGGACCAGAAGGGACAGATGCCTGACTACTCTCTTGATTTCTCAAAAATTAGGGAAAATAGGAAACAGAACAAGAGAGACGTGTCTCGAGCGAGTCTTGGAAATGAAGAGGAGCTCATTGCCTCAGCTGCGCCTCCAACCACAACGGACTCTTTCCCAACTGATAACCATCACCCCTATCATCAGAGTCATCATTCTCCACCAACGAGAAAGAGCATTCTAAGCTGCTTCAACTGCTGCTTGAAAGCTTGA

Protein sequence

MDDRKEKTAPWLSVPQFGDWDQKGQMPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIASAAPPTTTDSFPTDNHHPYHQSHHSPPTRKSILSCFNCCLKA
Homology
[Close]
BLAST of CmaCh03G010400 vs. TrEMBL
Match: A0A0A0KJ83_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G487580 PE=4 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 1.4e-51
Identity = 96/102 (94.12%), Postives = 101/102 (99.02%), Query Frame = 1 

Query: 1   MDDRKEKTAPWLSVPQFGDWDQKGQMPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIA 60
           MDDRKEKTAPWLSVPQFGDWDQKGQ+PDYSLDFSK+RENRKQNKRDVSRASLGNEEELIA
Sbjct: 1   MDDRKEKTAPWLSVPQFGDWDQKGQLPDYSLDFSKLRENRKQNKRDVSRASLGNEEELIA 60

Query: 61  SAAPPTTTDSFPTDNHHPYHQSHHSPPTRKSILSCFNCCLKA 103
            AAPPTTTD+FPTDNHHPYHQ+HHSPPTRKSILSCFNCC+KA
Sbjct: 61  KAAPPTTTDTFPTDNHHPYHQNHHSPPTRKSILSCFNCCVKA 102

[Close]
BLAST of CmaCh03G010400 vs. TrEMBL
Match: A0A059AL03_EUCGR (Uncharacterized protein (Fragment) OS=Eucalyptus grandis GN=EUGRSUZ_I003201 PE=4 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 8.5e-36
Identity = 79/103 (76.70%), Postives = 86/103 (83.50%), Query Frame = 1 

Query: 1   MDDRKEKTAPWLSVPQFGDWDQKGQMPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIA 60
           M+DRKEK  PWLSVPQFGDWDQKGQ+PDYSLDFSKIRE RKQNKRDVSRAS+GNEEEL +
Sbjct: 19  MEDRKEKNTPWLSVPQFGDWDQKGQVPDYSLDFSKIRETRKQNKRDVSRASIGNEEELAS 78

Query: 61  S-AAPPTTTDSFPTDNHHPYHQSHHSPPTRKSILSCFNCCLKA 103
           S    PT T   P D HH YH+S  SPPTR+SILSCFNCC+KA
Sbjct: 79  SKTVAPTAT---PDDGHH-YHESDPSPPTRRSILSCFNCCVKA 117

[Close]
BLAST of CmaCh03G010400 vs. TrEMBL
Match: D7SW64_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0031g01630 PE=4 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 2.5e-35
Identity = 78/102 (76.47%), Postives = 85/102 (83.33%), Query Frame = 1 

Query: 1   MDDRKEKTAPWLSVPQFGDWDQKGQMPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIA 60
           M+DRKEK APWLSVPQFGDWDQKGQ+PDYSLDFSKIRE RKQNKRDVSRASLGNEEEL+ 
Sbjct: 1   MEDRKEKAAPWLSVPQFGDWDQKGQVPDYSLDFSKIREMRKQNKRDVSRASLGNEEELV- 60

Query: 61  SAAPPTTTDSFPTDNHHPYHQSHHSPPTRKSILSCFNCCLKA 103
             APPTT       +HH YHQS HSP  R+SIL CF+CC+KA
Sbjct: 61  --APPTTNADTRQTDHHHYHQS-HSPTGRRSILGCFSCCVKA 98

[Close]
BLAST of CmaCh03G010400 vs. TrEMBL
Match: M5WKN7_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013840mg PE=4 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 4.2e-35
Identity = 78/103 (75.73%), Postives = 86/103 (83.50%), Query Frame = 1 

Query: 1   MDDRKEKTAPWLSVPQFGDWDQKGQMPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIA 60
           M+DRKEK APWLSVPQFGDWDQKGQ+PDYSLDFSKIRE RKQNKRDVSRASLGNEEELIA
Sbjct: 1   MEDRKEKNAPWLSVPQFGDWDQKGQVPDYSLDFSKIREMRKQNKRDVSRASLGNEEELIA 60

Query: 61  SAAPPTTTDSFPTDNHHP-YHQSHHSPPTRKSILSCFNCCLKA 103
           +    T     P ++HHP YHQ HHSP TR+SI S FNCC++A
Sbjct: 61  T---NTANVEPPHNDHHPHYHQRHHSPTTRRSIFSYFNCCVRA 100

[Close]
BLAST of CmaCh03G010400 vs. TrEMBL
Match: A0A059ALU6_EUCGR (Uncharacterized protein (Fragment) OS=Eucalyptus grandis GN=EUGRSUZ_I003201 PE=4 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 2.1e-34
Identity = 79/104 (75.96%), Postives = 86/104 (82.69%), Query Frame = 1 

Query: 1   MDDRKE-KTAPWLSVPQFGDWDQKGQMPDYSLDFSKIRENRKQNKRDVSRASLGNEEELI 60
           M+DRKE K  PWLSVPQFGDWDQKGQ+PDYSLDFSKIRE RKQNKRDVSRAS+GNEEEL 
Sbjct: 19  MEDRKEQKNTPWLSVPQFGDWDQKGQVPDYSLDFSKIRETRKQNKRDVSRASIGNEEELA 78

Query: 61  AS-AAPPTTTDSFPTDNHHPYHQSHHSPPTRKSILSCFNCCLKA 103
           +S    PT T   P D HH YH+S  SPPTR+SILSCFNCC+KA
Sbjct: 79  SSKTVAPTAT---PDDGHH-YHESDPSPPTRRSILSCFNCCVKA 118

[Close]
BLAST of CmaCh03G010400 vs. TAIR10
Match: AT5G09960.1 (AT5G09960.1 FUNCTIONS IN: molecular_function unknown)

HSP 1 Score: 134.0 bits (336), Expect = 5.1e-32
Identity = 71/110 (64.55%), Postives = 79/110 (71.82%), Query Frame = 1 

Query: 2   DDRKEKTAPWLSVPQFGDWDQKG--QMPDYSLDFSKIRENRKQNKRDVSRASLGNEEELI 61
           DDRKEK  PWLSVPQFGDWDQKG   MPDYS+DF+KIRE RKQNKRD SRASLGNEEELI
Sbjct: 3   DDRKEKNTPWLSVPQFGDWDQKGGGTMPDYSMDFTKIREMRKQNKRDPSRASLGNEEELI 62

Query: 62  ASAAPPTTTDSFPT---DNHHPYHQSH----HSPPTRKSILSCFNCCLKA 103
                 T+T    T   +N   +  SH    HSP TR+S+ SCFNCC+KA
Sbjct: 63  KPPESATSTAELTTVQSENQREFSPSHHHQPHSPSTRRSMFSCFNCCVKA 112

[Close]
BLAST of CmaCh03G010400 vs. TAIR10
Match: AT5G64850.1 (AT5G64850.1 FUNCTIONS IN: molecular_function unknown)

HSP 1 Score: 122.1 bits (305), Expect = 2.0e-28
Identity = 68/114 (59.65%), Postives = 77/114 (67.54%), Query Frame = 1 

Query: 1   MDDRKE-KTAPWLSVPQFGDWDQKGQMPDYSLDFSKIRENRKQNKRDVSRASLGNEEELI 60
           M+DRKE K +PWLSVPQFGDWDQKG   DYS+DFSKIRE RK NKRD SRASLGNEEELI
Sbjct: 1   MEDRKENKNSPWLSVPQFGDWDQKGGSIDYSMDFSKIREMRKLNKRDASRASLGNEEELI 60

Query: 61  --------ASAAPPTTTDSFPTDNHHPYHQSH---HSPPTRKSILSCFNCCLKA 103
                      A P    +  +DN++    SH   HSP  R+ I SCFNCC+KA
Sbjct: 61  NPFHDQPPVDTAKPKKLTTVHSDNNNRNEFSHHHPHSPSRRRRIFSCFNCCVKA 114

[Close]
BLAST of CmaCh03G010400 vs. TAIR10
Match: AT5G19473.1 (AT5G19473.1 RPM1-interacting protein 4 (RIN4) family protein)

HSP 1 Score: 74.7 bits (182), Expect = 3.7e-14
Identity = 43/106 (40.57%), Postives = 57/106 (53.77%), Query Frame = 1 

Query: 3   DRKEKTAPWLSVPQFGDWDQKG--QMPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIA 62
           D++ + A W  VPQFG WDQKG     +YS+ FSK R NRKQNK  V  +SLG+E+EL+ 
Sbjct: 2   DKRRENAAWTPVPQFGGWDQKGPNDATNYSVVFSKARANRKQNKAGVRHSSLGSEQELMV 61

Query: 63  SAAPPTTTDSFPTDNHHPYHQSHHSPP-----TRKSILSCFNCCLK 102
           S             NH   H  H +        +K IL+  NCC++
Sbjct: 62  SV----------RRNHQQLHHRHETQDDDPVMKKKRILTYINCCIR 97

[Close]
BLAST of CmaCh03G010400 vs. NCBI nr
Match: gi|449448412|ref|XP_004141960.1| (PREDICTED: uncharacterized protein LOC101206523 [Cucumis sativus])

HSP 1 Score: 209.9 bits (533), Expect = 2.1e-51
Identity = 96/102 (94.12%), Postives = 101/102 (99.02%), Query Frame = 1 

Query: 1   MDDRKEKTAPWLSVPQFGDWDQKGQMPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIA 60
           MDDRKEKTAPWLSVPQFGDWDQKGQ+PDYSLDFSK+RENRKQNKRDVSRASLGNEEELIA
Sbjct: 1   MDDRKEKTAPWLSVPQFGDWDQKGQLPDYSLDFSKLRENRKQNKRDVSRASLGNEEELIA 60

Query: 61  SAAPPTTTDSFPTDNHHPYHQSHHSPPTRKSILSCFNCCLKA 103
            AAPPTTTD+FPTDNHHPYHQ+HHSPPTRKSILSCFNCC+KA
Sbjct: 61  KAAPPTTTDTFPTDNHHPYHQNHHSPPTRKSILSCFNCCVKA 102

[Close]
BLAST of CmaCh03G010400 vs. NCBI nr
Match: gi|659079228|ref|XP_008440144.1| (PREDICTED: uncharacterized protein LOC103484698 isoform X2 [Cucumis melo])

HSP 1 Score: 205.7 bits (522), Expect = 3.9e-50
Identity = 97/103 (94.17%), Postives = 100/103 (97.09%), Query Frame = 1 

Query: 1   MDDRKEKTAPWLSVPQFGDWDQKGQMPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIA 60
           MDDRKEKTAPWLSVPQFGDWDQKGQ+PDYSLDFSK+RENRKQNKRDVSRASLGNEEELIA
Sbjct: 1   MDDRKEKTAPWLSVPQFGDWDQKGQLPDYSLDFSKLRENRKQNKRDVSRASLGNEEELIA 60

Query: 61  SAAPPTTTDSFPTDNHHPY-HQSHHSPPTRKSILSCFNCCLKA 103
            AAPPTTTDSFPTDNHHPY HQSHH PPTRKSILSCFNCC+KA
Sbjct: 61  KAAPPTTTDSFPTDNHHPYHHQSHHPPPTRKSILSCFNCCVKA 103

[Close]
BLAST of CmaCh03G010400 vs. NCBI nr
Match: gi|659079226|ref|XP_008440143.1| (PREDICTED: uncharacterized protein LOC103484698 isoform X1 [Cucumis melo])

HSP 1 Score: 196.4 bits (498), Expect = 2.4e-47
Identity = 92/99 (92.93%), Postives = 96/99 (96.97%), Query Frame = 1 

Query: 5   KEKTAPWLSVPQFGDWDQKGQMPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIASAAP 64
           +EKTAPWLSVPQFGDWDQKGQ+PDYSLDFSK+RENRKQNKRDVSRASLGNEEELIA AAP
Sbjct: 10  REKTAPWLSVPQFGDWDQKGQLPDYSLDFSKLRENRKQNKRDVSRASLGNEEELIAKAAP 69

Query: 65  PTTTDSFPTDNHHPY-HQSHHSPPTRKSILSCFNCCLKA 103
           PTTTDSFPTDNHHPY HQSHH PPTRKSILSCFNCC+KA
Sbjct: 70  PTTTDSFPTDNHHPYHHQSHHPPPTRKSILSCFNCCVKA 108

[Close]
BLAST of CmaCh03G010400 vs. NCBI nr
Match: gi|629088113|gb|KCW54366.1| (hypothetical protein EUGRSUZ_I003201, partial [Eucalyptus grandis])

HSP 1 Score: 157.5 bits (397), Expect = 1.2e-35
Identity = 79/103 (76.70%), Postives = 86/103 (83.50%), Query Frame = 1 

Query: 1   MDDRKEKTAPWLSVPQFGDWDQKGQMPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIA 60
           M+DRKEK  PWLSVPQFGDWDQKGQ+PDYSLDFSKIRE RKQNKRDVSRAS+GNEEEL +
Sbjct: 19  MEDRKEKNTPWLSVPQFGDWDQKGQVPDYSLDFSKIRETRKQNKRDVSRASIGNEEELAS 78

Query: 61  S-AAPPTTTDSFPTDNHHPYHQSHHSPPTRKSILSCFNCCLKA 103
           S    PT T   P D HH YH+S  SPPTR+SILSCFNCC+KA
Sbjct: 79  SKTVAPTAT---PDDGHH-YHESDPSPPTRRSILSCFNCCVKA 117

[Close]
BLAST of CmaCh03G010400 vs. NCBI nr
Match: gi|702459523|ref|XP_010027770.1| (PREDICTED: uncharacterized protein LOC104418198 isoform X2 [Eucalyptus grandis])

HSP 1 Score: 157.5 bits (397), Expect = 1.2e-35
Identity = 79/103 (76.70%), Postives = 86/103 (83.50%), Query Frame = 1 

Query: 1   MDDRKEKTAPWLSVPQFGDWDQKGQMPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIA 60
           M+DRKEK  PWLSVPQFGDWDQKGQ+PDYSLDFSKIRE RKQNKRDVSRAS+GNEEEL +
Sbjct: 1   MEDRKEKNTPWLSVPQFGDWDQKGQVPDYSLDFSKIRETRKQNKRDVSRASIGNEEELAS 60

Query: 61  S-AAPPTTTDSFPTDNHHPYHQSHHSPPTRKSILSCFNCCLKA 103
           S    PT T   P D HH YH+S  SPPTR+SILSCFNCC+KA
Sbjct: 61  SKTVAPTAT---PDDGHH-YHESDPSPPTRRSILSCFNCCVKA 99

The following BLAST results are available for this feature:
BLAST of CmaCh03G010400 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CmaCh03G010400 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KJ83_CUCSA1.4e-5194.12Uncharacterized protein OS=Cucumis sativus GN=Csa_6G487580 PE=4 SV=1[more]
A0A059AL03_EUCGR8.5e-3676.70Uncharacterized protein (Fragment) OS=Eucalyptus grandis GN=EUGRSUZ_I003201 PE=4... [more]
D7SW64_VITVI2.5e-3576.47Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0031g01630 PE=4 SV=... [more]
M5WKN7_PRUPE4.2e-3575.73Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013840mg PE=4 SV=1[more]
A0A059ALU6_EUCGR2.1e-3475.96Uncharacterized protein (Fragment) OS=Eucalyptus grandis GN=EUGRSUZ_I003201 PE=4... [more]
BLAST of CmaCh03G010400 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G09960.15.1e-3264.55 FUNCTIONS IN: molecular_function unknown[more]
AT5G64850.12.0e-2859.65 FUNCTIONS IN: molecular_function unknown[more]
AT5G19473.13.7e-1440.57 RPM1-interacting protein 4 (RIN4) family protein[more]
BLAST of CmaCh03G010400 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449448412|ref|XP_004141960.1|2.1e-5194.12PREDICTED: uncharacterized protein LOC101206523 [Cucumis sativus][more]
gi|659079228|ref|XP_008440144.1|3.9e-5094.17PREDICTED: uncharacterized protein LOC103484698 isoform X2 [Cucumis melo][more]
gi|659079226|ref|XP_008440143.1|2.4e-4792.93PREDICTED: uncharacterized protein LOC103484698 isoform X1 [Cucumis melo][more]
gi|629088113|gb|KCW54366.1|1.2e-3576.70hypothetical protein EUGRSUZ_I003201, partial [Eucalyptus grandis][more]
gi|702459523|ref|XP_010027770.1|1.2e-3576.70PREDICTED: uncharacterized protein LOC104418198 isoform X2 [Eucalyptus grandis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh03G010400.1CmaCh03G010400.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33882FAMILY NOT NAMEDcoord: 1..102
score: 9.1

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmaCh03G010400Cucsa.250380Cucumber (Gy14) v1cgycmaB0699
CmaCh03G010400Cucsa.101650Cucumber (Gy14) v1cgycmaB0231
CmaCh03G010400Cla008500Watermelon (97103) v1cmawmB629
CmaCh03G010400Csa2G297140Cucumber (Chinese Long) v2cmacuB653
CmaCh03G010400Csa6G487580Cucumber (Chinese Long) v2cmacuB681
CmaCh03G010400MELO3C007484Melon (DHL92) v3.5.1cmameB617
CmaCh03G010400MELO3C020960Melon (DHL92) v3.5.1cmameB590
CmaCh03G010400ClCG01G016140Watermelon (Charleston Gray)cmawcgB579
CmaCh03G010400ClCG02G001020Watermelon (Charleston Gray)cmawcgB581
CmaCh03G010400CSPI06G27280Wild cucumber (PI 183967)cmacpiB689
CmaCh03G010400CSPI02G15140Wild cucumber (PI 183967)cmacpiB659
CmaCh03G010400CmoCh02G006020Cucurbita moschata (Rifu)cmacmoB652
CmaCh03G010400CmoCh03G010400Cucurbita moschata (Rifu)cmacmoB653
CmaCh03G010400CmoCh07G007800Cucurbita moschata (Rifu)cmacmoB667
CmaCh03G010400Lsi01G010600Bottle gourd (USVL1VR-Ls)cmalsiB597
CmaCh03G010400Lsi10G006670Bottle gourd (USVL1VR-Ls)cmalsiB592
CmaCh03G010400Cp4.1LG19g11780Cucurbita pepo (Zucchini)cmacpeB671
CmaCh03G010400Cp4.1LG05g10910Cucurbita pepo (Zucchini)cmacpeB683
CmaCh03G010400MELO3C020960.2Melon (DHL92) v3.6.1cmamedB675
CmaCh03G010400MELO3C007484.2Melon (DHL92) v3.6.1cmamedB703
CmaCh03G010400CsaV3_2G017680Cucumber (Chinese Long) v3cmacucB0777
CmaCh03G010400CsaV3_6G042410Cucumber (Chinese Long) v3cmacucB0809
CmaCh03G010400Cla97C02G027420Watermelon (97103) v2cmawmbB678
CmaCh03G010400Cla97C01G015130Watermelon (97103) v2cmawmbB670
CmaCh03G010400Bhi03G001537Wax gourdcmawgoB0790
CmaCh03G010400Bhi10G001876Wax gourdcmawgoB0783
CmaCh03G010400CsGy6G026660Cucumber (Gy14) v2cgybcmaB831
CmaCh03G010400Carg05267Silver-seed gourdcarcmaB1125
CmaCh03G010400Carg00897Silver-seed gourdcarcmaB0567
CmaCh03G010400Carg11669Silver-seed gourdcarcmaB1467
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmaCh03G010400CmaCh02G005990Cucurbita maxima (Rimu)cmacmaB499
CmaCh03G010400CmaCh07G007590Cucurbita maxima (Rimu)cmacmaB523
The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh03G010400Cucurbita pepo (Zucchini)cmacpeB656
CmaCh03G010400Cucurbita pepo (Zucchini)cmacpeB660
CmaCh03G010400Cucumber (Gy14) v2cgybcmaB238
CmaCh03G010400Cucurbita maxima (Rimu)cmacmaB484
CmaCh03G010400Watermelon (97103) v1cmawmB644