Lsi01G010600 (gene) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi01G010600
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionRPM1-interacting protein 4 (RIN4) family protein
Locationchr01 : 8797753 .. 8805374 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTATTTTATCAAAGGCCATGACCCAACTGGTGCTCTTTAGCCCATTGCATCATATTTTGGATCATCTTAATTAGAGATGAATCAAGGTCAGGTCAAGGATGTCTTCTTTATTCTTATCTAGAATTTAATCACCTCCTCACCTCCCAGCAATAATTCATTGAATCAGGAGAAATTCCCTGCTTATTTTATATGTTTTTTTATTTTGTTTAATGTTATCATATGCATATCACACTTTTATGAGTTGTTTTTTTTTTCATTATTATAACTTTGTTTTTGTTAGTCAATATCATATATGAGGTAAATGAATATATATTTATAGAGATTCAAACATTTGATTAATAATGAATAATTCAAGAAGTCATTTGAATGGTATCAATATTTATACTTTTTTTTAGCATTGAGAGTCATTTGATAGATAAATTATGCGACTACAAGATAAAATGATAGAGTCGCGACACTACAGTAAATGGTGGTGAAACTAACATAGAGGGTCACCATCTGGTCTCGATTTAAAATAACCTCTCTAATTTAAGCTAGAGCAAAAATGCTAATTATATTGCAACAAGGAAATTTTGGGATGAAATAAGGCCCTTTTTTTTTCTTTTTTGTGTGTGGTTGAAGCTTAATTGGTTTCATTACCTCTTAAATTCTTCATAGAGGAATTTATTTTTGTTGGAAACCTTATTAACATTTCTCATATTTGTCACATATTTTAGAGAGGCGAACAAATTTATCTATACTATTGCATCTTTATATTCTTAGATCAAAGTTGTTCTTTGATTTGGAAATATGTATTTTAAGATAGTATCTTCCCATTCCTAATGAAGAGACGAGAGAGTAGTTTGACTTTAATTGTCTATTTTATTATTAATATAAAAAAATGAAACAATGATGTGATAATATTAAATTATTTTCCTTATAATTGACTCACTTTATTGTGCTATAAAATTTAGTATCAAACTCCAAAGTAGCTAAATTTGTTGTTCTTATAAATTGATATGCAATTGCAAAGACTTTTTTTTATTGCAAAATTCATATATTTACATCGATAAGATGAATATGAGTTTTTTATCGGCTAATTTATCTTAAAATCAAGTAAGTTAGCTTTAGGTTAAAACTAAAGCGTATATTCGATTATGTTGATTGTCTTCAACAAGGAAAAAAGAGCATAATTAATTTTGTTTCGAAATAAGAAAATTCATAATTCCTTTAGAGGTCATTAAGATAGTTGTTAAAGTTTTTATATGTAGGAACCATATTGTATTGGATTTTTTTAAATCGGCCCGTGCATAAAAGAGGCAATTTTTAGTTCAACGATATGCAAAGTGTAGACTTCGAATTTATGACTTCTTAATCAAAAGAGACAATTGAGAGTTCTAAATTTTTTATCTATAAAATTAATACTTGTATGATATTAGTTACATTATTAGTTAGTCCATGCTACACGTCAATAAATTTGGTTAGTTAAAGACTATCTTTCAATTTTTTTTTCCTTAAGGATTTTTTGTGGATTTTTTATTTGATTTTCTAGATAATATTGAGAGGCTGTGTATGTTGTACTCCAAGTGAGTTATAAATAAACTCTAATTTACATGATATTAAACTCGACTTGTACATTTGTGGTAAATAGTTCTGTGCAAATACATGTGTATATATATATATATATTTTAATAGCAAACTTTGTAATTGTACTAAAACAGCCTCTGCAATTCAATGTAGAGAAACCATTTTAGAGTTGAAATCCAAAGAAATGTAATTTCCAAGTTTATTTGAAACAAAAATCAATTCATACTCTAAATTTTATAAGTTGTATAATTAAAACTTTAAGCTTTATGAGTTTGATCAATACGAGTCACCACTCGTGAATTGATTTTATTTAAATTCAACTCAAAATTATCCTTCTTCTGAAATCCTATCAAAGAAGCAACAAAAAACGATGTAATAGTGACCTAAAACGAAAAATAAAAACTTGAATACAACCACACAGTTCCTAATCACCACCACACTCGTTTCAGATCTCAATTTTGATCCAAAATTCTAATAAATCTCTAAAAAAACATATTAAGACAAAGAGTGAAGTTGTTTAGTCTAAAGAGTTGTGAGATCCACCGTAAAGAGTTAACAAGTCATGAAATTGATGTTATTTAGTCGTGAGACTCGTGAATTCCTTGAGTCAAATAAGAATTTTGTATTAAATTTTTTAAATAAATATATGGATATTTTTAAACTAAGGGCAAAATTCAAGGTTTTTTCTTTTCCTTCCTGTAATATAAACTATTTTATTTGAAGAACCTAATCTAAACCATTCTTAGAACAAAATTCCCCAATCTTGCATTATAGATTAAAAACGTCGTCGTTTGGGAGAAAGTCCAATGACTCTAATCCGCGTAAGCGTCATGATATATATTTATTTAATCCGTGAAGGCTAAGCATACAACTGTAAAAGCCTGAGAACCAGCGAAGGCCGCACTTAAACAGCCAAGGCCACTAGACCAGTGCAGTAGTGGCATAATCGTAATATTGCAACGCGCGGAGCCCCATTATCGTCTATTCAGAGACCTATATGCACTCAACTGAGTCCTTCCGGTTTTTTCTTTTTCTCTTTTATCAAGCGAAGAAGAATATAAGAATTGCAGTGTCCTTTCCCGGTGTTACTTCGTTGCTTCTGCTCTACGCTTTCACTCTCAATCCTCTTCGCAGGGTAAGGAGCTTGAACTCTTCTCCTCTTGCTGCTTCAAGCGTCTTCTTGTCCGGTGTTCTTCGTTGTGTAGTGAAGTGAGAACTTGCAGATGGATGATCGTAAGGAGGTTGTTTTTCTCTCTGTTTTCGCTTTGTTGCTTTTGTGATTTCCTTGCTCTGTTTTTGTATATGTTTGTTTCCGTAGAGAAACCTAGGGTTTCGTTTTTTTCTTTGCGTTATTTGCTAGTAAGAGAGAGGAAATGCATAGATTTCTTGATCTGAGTTGAATTGTTCAGCGCGACTCTTGAAGAGGTGAGATTGTTGTCTCTTTGGTGTTTAAACCTCACCTAATGAAAACGATCATAGAAGCATTAGAATCTCGTTATTATTAGTTTTTTTTTTCCTGGTCAAACTGTGAATTGAATGTTGCTCTGTTGTTCGTTTCGTTTGAGCAAAATCATCGCTGTTTTCGTGGCGTTTCATCTTGCACATGCACTGGTATTTCCATTTTCCTCTTTGGAATTTGAGACTTGATTTTTTCTTTTACCTTATATTTCCGCCTTTTCCCGTCGAAATTTCTTACATTGCTTTTCAAATTCGGAAACGTAATTTGATTTGTTAGTTAGCTTGTTCTGATTTTGACGTATTTGTTTTGTCACGGGAGCAATTAGCGATATGCTTTTGCTTTTTAACCGTTTATGATTAATTCACGGAGGTAATCATGTTACTTTTCTAAGCTGGGAAGCAGTCAAACCTATCAACTTTTTCTTCCATCCTCTTGCCAATTATTTTCCTATGGTTCCAAAATTTCAACGCTTTAGCCGATAGGTTTGCTTCAGCTGCTCTTCTATTTCAACTCTTGACTTTTTGTTTATTTATATTTATATTTTAGCATGTTCTGAAGACTGAAGAATAAAATTTTAGAAAAGTTGCTGTCACTGACTTTGAAATTGGAAAAACTTATCCAATCATTACACTCCGCAGATAACGAATCAGATTTTAATTTGATTTATAAGAGTAACTTAATTTCTGGCTCTAATAAGATAGCAATTAGATTTCTGTGCTCATGTTCTTTTGTGAATACTAAATTACTAATGAGAGACGGCTAATAAATTAGACAATGAGAGGTTTCTGTGCAAACCTCCATGTGGTGTGTGCTTTAGGTGACAATAAATATGTTAGTTATAGAAAATTGAAAAGCTGTAGAGCTTTTAATTCGTGTTTTTTTAAATTTAAAAATTTTAAAAAAAAAAAAAAGAAAAGAAAAACGTAAATGTAACTGACATTCTTGGCTTCAACTTTGAGATACGTTACTTTTTATTTTCTACAGAAAACTGCTCCCTGGCTTTCAGTGCCACAGTTTGGAGATTGGGACCAGAAGGGACAGGTGCCTGACTACTCGCTTGATTTCTCAAAACTTAGGGAAAATAGGAAACAAAACAAGAGAGACGTGTCCCGGGCGAGTCTTGGAAATGAAGAGGAGCTCATTGCCTCAGCTGCACCCCCAACAACAACAGACCCTTTCCCTACTGATAATCATCACCCCTATCATCAGAGTCACCACCCTCCACCAGTAAGATTCTCGCTCCTCCCTAAAATTTCATATTGGTAACTTTTTGATTGTCTGATAGGGACTTGCATGTTCTTCTAAACAAATACCGTTTGGACAACTCAAGAATTTGTTGGGTTACATCAATGTGTTGTATACTTGTATGTGCCTTGAAGGTTCTTTATCAAACTTGTGGGTCCATGCTGCTTGCTATTATCTATTAACTTGTGGATACAGCTATTGATTGTGGAAAAATCACTGCAAACCTAAAAGTCTAGAGGTCAAAAGGAACACTTTCCTAAAGTGTCATCTAATTCTTTGATGAATAAGCTAATGAAAGTTTAATTCCTTGCATATTGGATCTCCTATCCTAAATGTTGTAGGATGAGGTAGTTGTTATTGTTAGTTATATATATAACTATCATGGATTGGCCTATTGGTAAAAAATGAGACATAGTCTCAAAAAATGGCTAAGAGGTCAAAGGTTCAATCCATGGTGGCCACCTACCTAGGAATTAATTTCTTACGAGTTTCCTTGACACCCAAATTAACAAGCTCAAGCATGCGTCAGTATTTTTAGAAGAGAATTCTTATTTACCCTCTGTTAACGTGAATTATGTCTGTACTCTGACATAATGCATCCTTTGCCTTGTTGCAGGGCATACAAGTTAAACAAGAATAATAAAACCAATCCATGATTGGAAAAAGATATATTAATTGTTTAAGAAGCTGAATGCATTTTGTGATCATGTCTGTTCAGTCGAAGGGAGAAGTTTAGATTATTCATCAACCTACTTAAATAACGAATTTTCACACGTCAAGAGTCTTATGCATCATTTAGATTTTGTGTGGGTAGTGTGTATTGTTCAATTAGAATGAGGTGAGATGTTGACTTAAAGTTGCGTTTGTGGAAACAAGTTGTGGGGGTTGGGTCCCTTTCGTCCCTAACCCACTAGTAAGCATTAATTGTGGGGATTCATCTGGTGTTTGATGTCACATCTCTCATAGATTAAAATTGGGGTAGTAAATCCTATCTCATATTTAGGAATGGCCAGATAGGTTTTCTTTTTCTTATGTGGGGAAGGTGAAGAGAAGCACATTTTCCCTACCAAGGACAGATTCTAACTTATGTCAATGTTGATGTTTATTCTATTTTCTTTCAGTTTCAATTAAGTCTAATTACCTAAATACAGGGTGCTTGAGATTTTTTTGGGTATGTTGGTTTATTGTGACTGACCGACCTCCCATGACCTTTAGATGTGTAGTCATACATATAAATTTCTTGGTTTCGATTGAAGGGGACGGTGATCATATTTTGGAAGGTTAGCCACAATATGACATTTAACTCATCTGGATCACTCTCGGTTTATGCTTCGTATATGGGGAAAATTTCTAGTACTAGATTTTTCATACTACTCCATTCATGGCTTGCTACAAAAGTAGAATTTAAGAATTGTGTGAGTCCACTGAATAAATGAATAATAAATTAATATATCATTTGATGAGGTGTCAAATTATGAATGAGAGTAATAGATACTACTGTAGTACTAGAAATTTTCCCATTACACACCGCATAAATAGAATGAAAATAAATGAATACTTTTTACGATCCTATTTTATTTTATCATCAGTTAAAATTATGTTTTAGATTTTTAATTGGTCTGGGCATTTAGATATTTTACGTGGTTAGTAGTATGCTTTACTGTTAACTTTACTTGTATTAAAAATTATTTGGGTATAAGATCTTAGCAAAATTGTACAAAACGGTGGGACCTCATTCATTTTGAGCAAGTATGGAAAAGTGTCTATTTTTGGATGTTTCTTACATATTTACATTTTTGGTTGTTTTGCCAGACAAGAAAGAGCATTCTAAGCTGCTTCAACTGCTGCGTGAAAGCTTGAATTAAGTAGTCTTGAAGACGACCTCTGCAGGCCCACTTTGTAAGTTCAAATTTCATTGTATTAATTGCTTGGTACGAATACCTCTATTGTCTTTTATTTGAACTAGAACAACTGTATTATATGTTTGGATTTTGTATGTGGCTTTGTTCCTGTGGCAGCTACTCTCATTAATTTTGCCTTGAATTAAGCAATTAGTTTGAGCTCCGTTTGGAATGATTTTCTAAGATTTTTTTTATTAATATTGTATTTAAAAAAAAAAAACCTATTAGAAATATTGTTATTTTATTCATTCTTGTCTAGTGCATCTTTTTATCTATCTTCAGTCTCTTCAAAAGTTATTTTTTGAAAAGTTATTTTTTGAAGAGACAAAGATAGAGATAAAAAGATGCATCTTGTCTCATCCAGAGACATGAGACAAGGATGAATAAAACAACAATATTTCAATAATAAGTTTCAAAACAACATTATATTTTTAATAAATTTAAAAAATATATATAATATTAAAAAAAATTCCTGACTTTCTTGGGGAAAAAAAATCATTCCAAATAGGCCGGAGTATTAGGTAGTGTAAACAAAAAAAAAGCATTGGATTTAGGTGATTTGGCTCGTCAAAAAAAAGAGAAACATCTCACAAGGCATAAGAATAACATTGCTTCTCATTACTTTGCTTATTTAATAGATAAAATATCATATAACACTCTTTAGTATCAAGAAAAAAGTTGATTAGAAGTTTAGAACAAAAAATTTGAGTGCAAAGTTTTACGATTTTGTAGAACAATGCTGAGTATGCCTATAATATCCAATTTCTCTTTTTAAAATGTCATTTTTATTTAATTTTTGCATAATTGACAATTTTCTTGTAATGGTAAGTTGAATACAAATTTCATGTGAGGTTCAAAATTGCAAATTAGAAAAGATAACCCAAATTAAGTTTTTTTTACCTTCTGTTTGCATAATCACATGGTAAAATAATTGTAACTACATGGTGAAGCATGCTAGTGGCCCTCGACGCTTGTTTCTCGTTGACCTAACACTTGCTTTTGATCTCGCTCTCGTTATTCTTTTCAATTCTAGCTCTATATATTTTAAATTTGAATTGACATATAATATTTCATTTCTTCTTCCTTGTTTTCTCATCTTTACTCACTCTATAACGAAGTGAGAATCGAGAATCAAGAATGAGTAGTGAGAGTAAGAGCGAAAGCAAGTGTCGAGTTATCAAGAGACAAACGAAAGTGAATTAGCGAGAAGTGAGCTTTAAGGGTCACCACAAGTGCTTCGAAGGATTGTTACATTAAAGTAAAGGTGAAAAAGCTTGGAGACTTTTTGGTTGGCAATTTGGATTTTATGTTTTAGATTCATTGTGTCTAGCAAATATCTGTTCAACCTGGATTCTATTTCTGAAAATTGTTTTCGAATGTGATCCGAACCATGGAAATTTTGAGAACAATATTTTTATGTTTTCAATATATTCAGATTTTGAATTTT

mRNA sequence

ATGGATAATATTGAGAGGCTGTGTATGTTGTACTCCAACGAAGAAGAATATAAGAATTGCAGTGTCCTTTCCCGGTGTTACTTCGTTGCTTCTGCTCTACGCTTTCACTCTCAATCCTCTTCGCAGGGTAAGGAGCTTGAACTCTTCTCCTCTTGCTGCTTCAAGCGTCTTCTTGTCCGCGCGACTCTTGAAGAGAAAACTGCTCCCTGGCTTTCAGTGCCACAGTTTGGAGATTGGGACCAGAAGGGACAGGTGCCTGACTACTCGCTTGATTTCTCAAAACTTAGGGAAAATAGGAAACAAAACAAGAGAGACGTGTCCCGGGCGAGTCTTGGAAATGAAGAGGAGCTCATTGCCTCAGCTGCACCCCCAACAACAACAGACCCTTTCCCTACTGATAATCATCACCCCTATCATCAGAGTCACCACCCTCCACCAGGGACGGTGATCATATTTTGGAAGACAAGAAAGAGCATTCTAAGCTGCTTCAACTGCTGCGTGAAAGCTTGAATTAAGTAGTCTTGAAGACGACCTCTGCAGGCCCACTTTTGAGAATCGAGAATCAAGAATGAGTAGTGAGAGTAAGAGCGAAAGCAAGTGTCGAGTTATCAAGAGACAAACGAAAGTGAATTAGCGAGAAGTGAGCTTTAAGGGTCACCACAAGTGCTTCGAAGGATTGTTACATTAAAGTAAAGGTGAAAAAGCTTGGAGACTTTTTGGTTGGCAATTTGGATTTTATGTTTTAGATTCATTGTGTCTAGCAAATATCTGTTCAACCTGGATTCTATTTCTGAAAATTGTTTTCGAATGTGATCCGAACCATGGAAATTTTGAGAACAATATTTTTATGTTTTCAATATATTCAGATTTTGAATTTT

Coding sequence (CDS)

ATGGATAATATTGAGAGGCTGTGTATGTTGTACTCCAACGAAGAAGAATATAAGAATTGCAGTGTCCTTTCCCGGTGTTACTTCGTTGCTTCTGCTCTACGCTTTCACTCTCAATCCTCTTCGCAGGGTAAGGAGCTTGAACTCTTCTCCTCTTGCTGCTTCAAGCGTCTTCTTGTCCGCGCGACTCTTGAAGAGAAAACTGCTCCCTGGCTTTCAGTGCCACAGTTTGGAGATTGGGACCAGAAGGGACAGGTGCCTGACTACTCGCTTGATTTCTCAAAACTTAGGGAAAATAGGAAACAAAACAAGAGAGACGTGTCCCGGGCGAGTCTTGGAAATGAAGAGGAGCTCATTGCCTCAGCTGCACCCCCAACAACAACAGACCCTTTCCCTACTGATAATCATCACCCCTATCATCAGAGTCACCACCCTCCACCAGGGACGGTGATCATATTTTGGAAGACAAGAAAGAGCATTCTAAGCTGCTTCAACTGCTGCGTGAAAGCTTGA

Protein sequence

MDNIERLCMLYSNEEEYKNCSVLSRCYFVASALRFHSQSSSQGKELELFSSCCFKRLLVRATLEEKTAPWLSVPQFGDWDQKGQVPDYSLDFSKLRENRKQNKRDVSRASLGNEEELIASAAPPTTTDPFPTDNHHPYHQSHHPPPGTVIIFWKTRKSILSCFNCCVKA
Homology
[Close]
BLAST of Lsi01G010600 vs. TrEMBL
Match: A0A0A0KJ83_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G487580 PE=4 SV=1)

HSP 1 Score: 192.6 bits (488), Expect = 3.9e-46
Identity = 92/106 (86.79%), Postives = 95/106 (89.62%), Query Frame = 1 

Query: 64  EEKTAPWLSVPQFGDWDQKGQVPDYSLDFSKLRENRKQNKRDVSRASLGNEEELIASAAP 123
           +EKTAPWLSVPQFGDWDQKGQ+PDYSLDFSKLRENRKQNKRDVSRASLGNEEELIA AAP
Sbjct: 5   KEKTAPWLSVPQFGDWDQKGQLPDYSLDFSKLRENRKQNKRDVSRASLGNEEELIAKAAP 64

Query: 124 PTTTDPFPTDNHHPYHQSHHPPPGTVIIFWKTRKSILSCFNCCVKA 170
           PTTTD FPTDNHHPYHQ+HH PP        TRKSILSCFNCCVKA
Sbjct: 65  PTTTDTFPTDNHHPYHQNHHSPP--------TRKSILSCFNCCVKA 102

[Close]
BLAST of Lsi01G010600 vs. TrEMBL
Match: D7SW64_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0031g01630 PE=4 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 9.4e-32
Identity = 74/106 (69.81%), Postives = 80/106 (75.47%), Query Frame = 1 

Query: 64  EEKTAPWLSVPQFGDWDQKGQVPDYSLDFSKLRENRKQNKRDVSRASLGNEEELIASAAP 123
           +EK APWLSVPQFGDWDQKGQVPDYSLDFSK+RE RKQNKRDVSRASLGNEEEL+   AP
Sbjct: 5   KEKAAPWLSVPQFGDWDQKGQVPDYSLDFSKIREMRKQNKRDVSRASLGNEEELV---AP 64

Query: 124 PTTTDPFPTDNHHPYHQSHHPPPGTVIIFWKTRKSILSCFNCCVKA 170
           PTT       +HH YHQSH P           R+SIL CF+CCVKA
Sbjct: 65  PTTNADTRQTDHHHYHQSHSP---------TGRRSILGCFSCCVKA 98

[Close]
BLAST of Lsi01G010600 vs. TrEMBL
Match: A0A059ALU6_EUCGR (Uncharacterized protein (Fragment) OS=Eucalyptus grandis GN=EUGRSUZ_I003201 PE=4 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 2.7e-31
Identity = 75/107 (70.09%), Postives = 81/107 (75.70%), Query Frame = 1 

Query: 64  EEKTAPWLSVPQFGDWDQKGQVPDYSLDFSKLRENRKQNKRDVSRASLGNEEELIAS-AA 123
           E+K  PWLSVPQFGDWDQKGQVPDYSLDFSK+RE RKQNKRDVSRAS+GNEEEL +S   
Sbjct: 24  EQKNTPWLSVPQFGDWDQKGQVPDYSLDFSKIRETRKQNKRDVSRASIGNEEELASSKTV 83

Query: 124 PPTTTDPFPTDNHHPYHQSHHPPPGTVIIFWKTRKSILSCFNCCVKA 170
            PT T   P D HH YH+S   PP        TR+SILSCFNCCVKA
Sbjct: 84  APTAT---PDDGHH-YHESDPSPP--------TRRSILSCFNCCVKA 118

[Close]
BLAST of Lsi01G010600 vs. TrEMBL
Match: A0A059AL03_EUCGR (Uncharacterized protein (Fragment) OS=Eucalyptus grandis GN=EUGRSUZ_I003201 PE=4 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 3.6e-31
Identity = 75/107 (70.09%), Postives = 81/107 (75.70%), Query Frame = 1 

Query: 64  EEKTAPWLSVPQFGDWDQKGQVPDYSLDFSKLRENRKQNKRDVSRASLGNEEELIAS-AA 123
           +EK  PWLSVPQFGDWDQKGQVPDYSLDFSK+RE RKQNKRDVSRAS+GNEEEL +S   
Sbjct: 23  KEKNTPWLSVPQFGDWDQKGQVPDYSLDFSKIRETRKQNKRDVSRASIGNEEELASSKTV 82

Query: 124 PPTTTDPFPTDNHHPYHQSHHPPPGTVIIFWKTRKSILSCFNCCVKA 170
            PT T   P D HH YH+S   PP        TR+SILSCFNCCVKA
Sbjct: 83  APTAT---PDDGHH-YHESDPSPP--------TRRSILSCFNCCVKA 117

[Close]
BLAST of Lsi01G010600 vs. TrEMBL
Match: M5WKN7_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013840mg PE=4 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 1.8e-30
Identity = 74/107 (69.16%), Postives = 82/107 (76.64%), Query Frame = 1 

Query: 64  EEKTAPWLSVPQFGDWDQKGQVPDYSLDFSKLRENRKQNKRDVSRASLGNEEELIASAAP 123
           +EK APWLSVPQFGDWDQKGQVPDYSLDFSK+RE RKQNKRDVSRASLGNEEELIA+   
Sbjct: 5   KEKNAPWLSVPQFGDWDQKGQVPDYSLDFSKIREMRKQNKRDVSRASLGNEEELIATNT- 64

Query: 124 PTTTDPFPTDNHHP-YHQSHHPPPGTVIIFWKTRKSILSCFNCCVKA 170
               +P P ++HHP YHQ HH P         TR+SI S FNCCV+A
Sbjct: 65  -ANVEP-PHNDHHPHYHQRHHSP--------TTRRSIFSYFNCCVRA 100

[Close]
BLAST of Lsi01G010600 vs. TAIR10
Match: AT5G09960.1 (AT5G09960.1 FUNCTIONS IN: molecular_function unknown)

HSP 1 Score: 122.9 bits (307), Expect = 1.9e-28
Identity = 65/111 (58.56%), Postives = 76/111 (68.47%), Query Frame = 1 

Query: 64  EEKTAPWLSVPQFGDWDQKG--QVPDYSLDFSKLRENRKQNKRDVSRASLGNEEELIASA 123
           +EK  PWLSVPQFGDWDQKG   +PDYS+DF+K+RE RKQNKRD SRASLGNEEELI   
Sbjct: 6   KEKNTPWLSVPQFGDWDQKGGGTMPDYSMDFTKIREMRKQNKRDPSRASLGNEEELIKPP 65

Query: 124 APPTTTDPFPT---DNHHPYHQSHHPPPGTVIIFWKTRKSILSCFNCCVKA 170
              T+T    T   +N   +  SHH  P +      TR+S+ SCFNCCVKA
Sbjct: 66  ESATSTAELTTVQSENQREFSPSHHHQPHSP----STRRSMFSCFNCCVKA 112

[Close]
BLAST of Lsi01G010600 vs. TAIR10
Match: AT5G64850.1 (AT5G64850.1 FUNCTIONS IN: molecular_function unknown)

HSP 1 Score: 114.8 bits (286), Expect = 5.3e-26
Identity = 63/114 (55.26%), Postives = 70/114 (61.40%), Query Frame = 1 

Query: 64  EEKTAPWLSVPQFGDWDQKGQVPDYSLDFSKLRENRKQNKRDVSRASLGNEEELI----- 123
           E K +PWLSVPQFGDWDQKG   DYS+DFSK+RE RK NKRD SRASLGNEEELI     
Sbjct: 6   ENKNSPWLSVPQFGDWDQKGGSIDYSMDFSKIREMRKLNKRDASRASLGNEEELINPFHD 65

Query: 124 ---ASAAPPTTTDPFPTDNHHPYHQSHHPPPGTVIIFWKTRKSILSCFNCCVKA 170
                 A P       +DN++    SHH P          R+ I SCFNCCVKA
Sbjct: 66  QPPVDTAKPKKLTTVHSDNNNRNEFSHHHPHSP-----SRRRRIFSCFNCCVKA 114

[Close]
BLAST of Lsi01G010600 vs. TAIR10
Match: AT5G19473.1 (AT5G19473.1 RPM1-interacting protein 4 (RIN4) family protein)

HSP 1 Score: 73.6 bits (179), Expect = 1.3e-13
Identity = 42/105 (40.00%), Postives = 55/105 (52.38%), Query Frame = 1 

Query: 66  KTAPWLSVPQFGDWDQKG--QVPDYSLDFSKLRENRKQNKRDVSRASLGNEEELIASAAP 125
           + A W  VPQFG WDQKG     +YS+ FSK R NRKQNK  V  +SLG+E+EL+ S   
Sbjct: 6   ENAAWTPVPQFGGWDQKGPNDATNYSVVFSKARANRKQNKAGVRHSSLGSEQELMVSV-- 65

Query: 126 PTTTDPFPTDNHHPYHQSHHPPPGTVIIFWKTRKSILSCFNCCVK 169
                     NH   H  H       ++    +K IL+  NCC++
Sbjct: 66  --------RRNHQQLHHRHETQDDDPVM---KKKRILTYINCCIR 97

[Close]
BLAST of Lsi01G010600 vs. NCBI nr
Match: gi|449448412|ref|XP_004141960.1| (PREDICTED: uncharacterized protein LOC101206523 [Cucumis sativus])

HSP 1 Score: 192.6 bits (488), Expect = 5.6e-46
Identity = 92/106 (86.79%), Postives = 95/106 (89.62%), Query Frame = 1 

Query: 64  EEKTAPWLSVPQFGDWDQKGQVPDYSLDFSKLRENRKQNKRDVSRASLGNEEELIASAAP 123
           +EKTAPWLSVPQFGDWDQKGQ+PDYSLDFSKLRENRKQNKRDVSRASLGNEEELIA AAP
Sbjct: 5   KEKTAPWLSVPQFGDWDQKGQLPDYSLDFSKLRENRKQNKRDVSRASLGNEEELIAKAAP 64

Query: 124 PTTTDPFPTDNHHPYHQSHHPPPGTVIIFWKTRKSILSCFNCCVKA 170
           PTTTD FPTDNHHPYHQ+HH PP        TRKSILSCFNCCVKA
Sbjct: 65  PTTTDTFPTDNHHPYHQNHHSPP--------TRKSILSCFNCCVKA 102

[Close]
BLAST of Lsi01G010600 vs. NCBI nr
Match: gi|659079228|ref|XP_008440144.1| (PREDICTED: uncharacterized protein LOC103484698 isoform X2 [Cucumis melo])

HSP 1 Score: 192.2 bits (487), Expect = 7.4e-46
Identity = 94/107 (87.85%), Postives = 96/107 (89.72%), Query Frame = 1 

Query: 64  EEKTAPWLSVPQFGDWDQKGQVPDYSLDFSKLRENRKQNKRDVSRASLGNEEELIASAAP 123
           +EKTAPWLSVPQFGDWDQKGQ+PDYSLDFSKLRENRKQNKRDVSRASLGNEEELIA AAP
Sbjct: 5   KEKTAPWLSVPQFGDWDQKGQLPDYSLDFSKLRENRKQNKRDVSRASLGNEEELIAKAAP 64

Query: 124 PTTTDPFPTDNHHPY-HQSHHPPPGTVIIFWKTRKSILSCFNCCVKA 170
           PTTTD FPTDNHHPY HQSHHPPP        TRKSILSCFNCCVKA
Sbjct: 65  PTTTDSFPTDNHHPYHHQSHHPPP--------TRKSILSCFNCCVKA 103

[Close]
BLAST of Lsi01G010600 vs. NCBI nr
Match: gi|659079226|ref|XP_008440143.1| (PREDICTED: uncharacterized protein LOC103484698 isoform X1 [Cucumis melo])

HSP 1 Score: 191.8 bits (486), Expect = 9.6e-46
Identity = 94/106 (88.68%), Postives = 95/106 (89.62%), Query Frame = 1 

Query: 65  EKTAPWLSVPQFGDWDQKGQVPDYSLDFSKLRENRKQNKRDVSRASLGNEEELIASAAPP 124
           EKTAPWLSVPQFGDWDQKGQ+PDYSLDFSKLRENRKQNKRDVSRASLGNEEELIA AAPP
Sbjct: 11  EKTAPWLSVPQFGDWDQKGQLPDYSLDFSKLRENRKQNKRDVSRASLGNEEELIAKAAPP 70

Query: 125 TTTDPFPTDNHHPY-HQSHHPPPGTVIIFWKTRKSILSCFNCCVKA 170
           TTTD FPTDNHHPY HQSHHPPP        TRKSILSCFNCCVKA
Sbjct: 71  TTTDSFPTDNHHPYHHQSHHPPP--------TRKSILSCFNCCVKA 108

[Close]
BLAST of Lsi01G010600 vs. NCBI nr
Match: gi|225438551|ref|XP_002279833.1| (PREDICTED: uncharacterized protein LOC100245593 isoform X1 [Vitis vinifera])

HSP 1 Score: 144.8 bits (364), Expect = 1.4e-31
Identity = 74/106 (69.81%), Postives = 80/106 (75.47%), Query Frame = 1 

Query: 64  EEKTAPWLSVPQFGDWDQKGQVPDYSLDFSKLRENRKQNKRDVSRASLGNEEELIASAAP 123
           +EK APWLSVPQFGDWDQKGQVPDYSLDFSK+RE RKQNKRDVSRASLGNEEEL+   AP
Sbjct: 5   KEKAAPWLSVPQFGDWDQKGQVPDYSLDFSKIREMRKQNKRDVSRASLGNEEELV---AP 64

Query: 124 PTTTDPFPTDNHHPYHQSHHPPPGTVIIFWKTRKSILSCFNCCVKA 170
           PTT       +HH YHQSH P           R+SIL CF+CCVKA
Sbjct: 65  PTTNADTRQTDHHHYHQSHSP---------TGRRSILGCFSCCVKA 98

[Close]
BLAST of Lsi01G010600 vs. NCBI nr
Match: gi|629088112|gb|KCW54365.1| (hypothetical protein EUGRSUZ_I003201, partial [Eucalyptus grandis])

HSP 1 Score: 143.3 bits (360), Expect = 3.9e-31
Identity = 75/107 (70.09%), Postives = 81/107 (75.70%), Query Frame = 1 

Query: 64  EEKTAPWLSVPQFGDWDQKGQVPDYSLDFSKLRENRKQNKRDVSRASLGNEEELIAS-AA 123
           E+K  PWLSVPQFGDWDQKGQVPDYSLDFSK+RE RKQNKRDVSRAS+GNEEEL +S   
Sbjct: 24  EQKNTPWLSVPQFGDWDQKGQVPDYSLDFSKIRETRKQNKRDVSRASIGNEEELASSKTV 83

Query: 124 PPTTTDPFPTDNHHPYHQSHHPPPGTVIIFWKTRKSILSCFNCCVKA 170
            PT T   P D HH YH+S   PP        TR+SILSCFNCCVKA
Sbjct: 84  APTAT---PDDGHH-YHESDPSPP--------TRRSILSCFNCCVKA 118

The following BLAST results are available for this feature:
BLAST of Lsi01G010600 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Lsi01G010600 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KJ83_CUCSA3.9e-4686.79Uncharacterized protein OS=Cucumis sativus GN=Csa_6G487580 PE=4 SV=1[more]
D7SW64_VITVI9.4e-3269.81Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0031g01630 PE=4 SV=... [more]
A0A059ALU6_EUCGR2.7e-3170.09Uncharacterized protein (Fragment) OS=Eucalyptus grandis GN=EUGRSUZ_I003201 PE=4... [more]
A0A059AL03_EUCGR3.6e-3170.09Uncharacterized protein (Fragment) OS=Eucalyptus grandis GN=EUGRSUZ_I003201 PE=4... [more]
M5WKN7_PRUPE1.8e-3069.16Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013840mg PE=4 SV=1[more]
BLAST of Lsi01G010600 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G09960.11.9e-2858.56 FUNCTIONS IN: molecular_function unknown[more]
AT5G64850.15.3e-2655.26 FUNCTIONS IN: molecular_function unknown[more]
AT5G19473.11.3e-1340.00 RPM1-interacting protein 4 (RIN4) family protein[more]
BLAST of Lsi01G010600 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449448412|ref|XP_004141960.1|5.6e-4686.79PREDICTED: uncharacterized protein LOC101206523 [Cucumis sativus][more]
gi|659079228|ref|XP_008440144.1|7.4e-4687.85PREDICTED: uncharacterized protein LOC103484698 isoform X2 [Cucumis melo][more]
gi|659079226|ref|XP_008440143.1|9.6e-4688.68PREDICTED: uncharacterized protein LOC103484698 isoform X1 [Cucumis melo][more]
gi|225438551|ref|XP_002279833.1|1.4e-3169.81PREDICTED: uncharacterized protein LOC100245593 isoform X1 [Vitis vinifera][more]
gi|629088112|gb|KCW54365.1|3.9e-3170.09hypothetical protein EUGRSUZ_I003201, partial [Eucalyptus grandis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi01G010600.1Lsi01G010600.1mRNA


InterPro
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33882FAMILY NOT NAMEDcoord: 64..169
score: 7.6

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Lsi01G010600Csa6G487580Cucumber (Chinese Long) v2culsiB434
Lsi01G010600CSPI06G27280Wild cucumber (PI 183967)cpilsiB439
Lsi01G010600Cucsa.101650Cucumber (Gy14) v1cgylsiB125
Lsi01G010600CmaCh03G010400Cucurbita maxima (Rimu)cmalsiB597
Lsi01G010600CmaCh07G007590Cucurbita maxima (Rimu)cmalsiB786
Lsi01G010600CmoCh03G010400Cucurbita moschata (Rifu)cmolsiB582
Lsi01G010600CmoCh07G007800Cucurbita moschata (Rifu)cmolsiB774
Lsi01G010600Cla008500Watermelon (97103) v1lsiwmB142
Lsi01G010600MELO3C007484Melon (DHL92) v3.5.1lsimeB156
Lsi01G010600ClCG01G016140Watermelon (Charleston Gray)lsiwcgB127
Lsi01G010600MELO3C007484.2Melon (DHL92) v3.6.1lsimedB163
Lsi01G010600MELO3C020960.2Melon (DHL92) v3.6.1lsimedB134
Lsi01G010600Cla97C01G015130Watermelon (97103) v2lsiwmbB115
Lsi01G010600Cla97C02G027420Watermelon (97103) v2lsiwmbB126
Lsi01G010600Bhi03G001537Wax gourdlsiwgoB171
Lsi01G010600Bhi10G001876Wax gourdlsiwgoB162
Lsi01G010600Cp4.1LG19g11780Cucurbita pepo (Zucchini)cpelsiB396
Lsi01G010600CsGy6G026660Cucumber (Gy14) v2cgyblsiB398
Lsi01G010600Carg00897Silver-seed gourdcarlsiB364
Lsi01G010600Carg05267Silver-seed gourdcarlsiB742
Lsi01G010600CsaV3_2G017680Cucumber (Chinese Long) v3cuclsiB116
Lsi01G010600CsaV3_6G042410Cucumber (Chinese Long) v3cuclsiB462
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Lsi01G010600Cucurbita pepo (Zucchini)cpelsiB054
Lsi01G010600Cucumber (Gy14) v2cgyblsiB096