Carg00897 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideCDSexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTTCCATAATTTCAACGCTTTAGCCGATAGGTTTCCTTCAGTTGCTCTTCTATTTCGACCATTGACTTTTTGTTTATTTATTTATATATATTTTAGCATGTTCTGAAGACTGAAAAATAAAATTTCAGAGAAATTGCTGTCGCTGACCTTGAAGTGGAAAAACTTATCCAATTAAATACTCTCCACATATAATGAATCGTATAGTTATTTGATTTATAAGAGAAACTTACTTTTTGGCTCGAATAAGATGGAAAATTGGGAATAGATTAAAACAAAGCCTATAATGGTCAGTTTCCTATATGCGCATGTTCTTGTGTGAATACTAATGAAAGACGAGTAATAAATTAGACAAGGTGAGGTTACTGTGCAAATCTCTGATATGGCGTGTGCTAGCTGACAATAAATATGTTAGTTTTAGAAAATTGAAAAGCTTTAGAGTTTTTAATTGATGTTGTTTTAATAATTTAATTCTTAAATGTAACTTACATTCTTGGCTTCAACTTAAAGATACGTTCCTTTTTATTTTCTACAGAAAACTGCTCCATGGCTTTCAGTGCCACAGTTTGGAGATTGGGACCAGAAGGGACAGATGCCTGACTACTCTCTTGATTTCTCAAAAATTAGGGAAAATAGGAAACAGAACAAGAGAGACGTGTCTCGAGCGAGTCTTGGAAATGAAGAGGAGCTCATTGCCTCAGCTGCGCCTCCAACCACAACGAACTCTTTCCCAACTGATAACCATCACCCCTATCATCAGAGTCATCATTCTCCACCAGTAAGATTCTCGCTTCTCCTCCCTAGATTTGATATTCGTAACTTATTGTCTGATAGGGACTTGCATGTTCTTCTAAACAAATACCGTTTGGACAACTCAAGAATTTGTTGGCTTGGGTTGGGTTATATCAATGTGTTGTATGTGCCTGGAAAGTTCTTTATCAAACTTGTGGGTCCATGCTGCCTGCTATTATTTATTAACTTGTGGGCACAACTATTGATTGTGGAAAAATCAATACAAACCTAAAAGTCACAATGTCCATAGGAATACTTTCCGAAAGTGTCATCTAATTTTATGATGAATAGGCTAATGAAAGTTTTAATATTAGATCTCCTGCCCTAAGTGCTCTAGGATGTGGTAAATGTTAGTTACATATATATATTGAAAAAAGATCTCAGATACCAGTCATATTTTCAGTCTTATATTTTTTTTTGATGATCACAACTCTTCCTATCCATAGGATTGTGGCTTTGAAATTTAGTCAACTTGGTTCTTGTTTAATTTCCAGGGTTAACCATTGGTGTTACTGTTTGAATTACTTAGAGGTTATCTCTTATATTGGTGACGTGAAACGTACATTGATGTCTGCATAGAAACTAGATCAAACAAGCTGCAGTGTTTTAGAAGAGAACTCTCATCTACTATTTGTTAATGTTAATCATGTCCGTAATGTTACATTCTATGCCTTGTTTCAGGGCATAAAATTTAAACAAGAGTGATAAAACTTATGGATGATTGGAAAAAGATAAATAAATTGTTTAAGAAGCTGAGTGCATTTTTTCATCTCGTCAGTCCAGTTGAAGGGGAATCTTAGATGATCCATTAGCATACATAAATAACTAATAAACTTACAGGTCTTGACTCTTGTGCATCGTTTAGATTTTATGCAGTCTGTGTGTATTGTGCAATTAGAATGAGGTGAGATGTTGACGTAAAGTTATTGGTGGAAACAAGTTTGGGGCGGGGTCCCCTTCGCACCTAGCCCACTAGAAAATATTAGTTGTGGGCATTCATGTGGTGTATGTTGCCACATCTCCCAAAGATTGAAATCGGGGGAATAAATCCTATCTCATATTAAGGAACGACCAGAAAGGTTTTCTTTTCTTAATATGGGGAAGGTGAAGAAAAGCACATTTTTCCTACTAAGGACAGATTCTAGCTTATGTCAATGTCGATTTTTGTTTTAGTTCTTTTTAGATTAGCTGTAAATGGCGGTTGAGAAATTTTCAGGTGTGTTGGTTTATTATGGTTGACCGACTTCCTGTGACCTTCAGATGTGTAGTCTCACATATAATTTCTTGGTTTAATTGAAGGGGATGATGATTATATTTTGGACGGTCAGCCACAATATGACATTTAACTCAGATAATTTCTGGTTCACTCTCAGTATATGCTTCGTATATGTTTTATTGCATTAAACAAGAACAGTTAACCACAGCACCGCATTAATTGCTTTGGACAAATCAACTTCTAAATCAAATAGATGAGATGCTGGTTGGCTTGCCTAGTCAGATATAGAATGAAAATAATTGAATGCATTTTATGATCCTATTTATTTAATTGTCGGTTGAAGTTATGTTTTAGATTTTAATTGGACTGAGCATTTAGATATTTTACGTGGTTAGAAGTATGCTTTCATGTTAACTTTATCTGCATTACAAATTAGTCAAACTAGTGAATAACTTGGTTCATATTACCCTTCACCAAAAAAAAAAAAAAAAAAAAGAAAAAGAACTCAGTTCATATTATAACGGGTTTCATAGTTTAACCTCTTCTTTGGTCTTGGGTATTGTAATGAATCGATGAATGAAAAAAGAAAAAAAAGAAAAACGGAGGACTTGATATTGTTGATCCATTCGGAGTTAAATGTTTAAGGGAGTAGGGTGCTTGGTTGTCTTAGCTTATTAAGTTTAGGGTTGAAGAACTTCAGTCTATGTTACTGTTGTTTGTGTCTTGACTTCGCAAACGAATGGCTTTGTGAAGTCTGTCTATCTAATGTATATGTTTGGATTGTGCAAAGAAGTGAGTTTGTTAATATTGAAGTTCTGTAAGTTATGCTTGGCAGGGTGGTTTTGAGATTTGAAAAAGTTAATTTGAAAATCTATTTGTTTATTATTTGGCACGTAAAAATGTAAAATTTAAATAAATTGCATGAAATGTTTCTTAACATTTTGCTTGATAGGTTAGTGGGTAACATTATCCAGAGTGAAGGAAGTACTTTTGTAGTATCACTGACAGTTATCAAGCTCATCTCATCCCGGAGGATTAAAAAATTGTGAGGTGGGGGAAGAGTGAGCATTAGAGGGGAAGGAAGAAGGTCTTTCCCAATCTGTCTTGGGGTATTTTGTAGTAAAACCATGGATTAGTTCAATGGTATTGAACTTGTATAAAGTTGTAAAATGGGTGGACAAGCTTCCAGCTCAAGAGATTGGGGTGCTTACCAAAATCTGAATATGGAGGTTCAAACTTGTTTGAACTAATGTACTTTATTTTAAGTTCTATTTAGGTATGATATCTTAGCTAAACTGTACAAAATAATTGGACGAGTATGGAAAAGTGTGTCTATTTTTGGATGATTCTTACGTGTATATATTTTTTTTTTTGTTGATTTGCCAGACAAGAAAGAGCATTCTAAGCTGCTTCAACTGCTGCGTGAAAGCCTGAATTGAGTAGTCTTGAAGAGCCCACTTGTAAGTTGAAATGTCATTGTATTTATTATTGCTTTGGTTCGATTACCTTCACTGCCCTTTATTTGAATTAGAACAAATGTATTATATGTTTGGATTTTGTAACATGGCTTTGTTCTGGACTGTGGCTGCTACTGTCTCATTAATTCCTCCTTGAATTAA ATGAAAACTGCTCCATGGCTTTCAGTGCCACAGTTTGGAGATTGGGACCAGAAGGGACAGATGCCTGACTACTCTCTTGATTTCTCAAAAATTAGGGAAAATAGGAAACAGAACAAGAGAGACGTGTCTCGAGCGAGTCTTGGAAATGAAGAGGAGCTCATTGCCTCAGCTGCGCCTCCAACCACAACGAACTCTTTCCCAACTGATAACCATCACCCCTATCATCAGAGTCATCATTCTCCACCAACAAGAAAGAGCATTCTAAGCTGCTTCAACTGCTGCGTGAAAGCCTGAATTGAGTAGTCTTGAAGAGCCCACTTGTAAGTTGAAATGTCATTGTATTTATTATTGCTTTGGTTCGATTACCTTCACTGCCCTTTATTTGAATTAGAACAAATGTATTATATGTTTGGATTTTGTAACATGGCTTTGTTCTGGACTGTGGCTGCTACTGTCTCATTAATTCCTCCTTGAATTAA ATGAAAACTGCTCCATGGCTTTCAGTGCCACAGTTTGGAGATTGGGACCAGAAGGGACAGATGCCTGACTACTCTCTTGATTTCTCAAAAATTAGGGAAAATAGGAAACAGAACAAGAGAGACGTGTCTCGAGCGAGTCTTGGAAATGAAGAGGAGCTCATTGCCTCAGCTGCGCCTCCAACCACAACGAACTCTTTCCCAACTGATAACCATCACCCCTATCATCAGAGTCATCATTCTCCACCAACAAGAAAGAGCATTCTAAGCTGCTTCAACTGCTGCGTGAAAGCCTGA MKTAPWLSVPQFGDWDQKGQMPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIASAAPPTTTNSFPTDNHHPYHQSHHSPPTRKSILSCFNCCVKA
BLAST of Carg00897 vs. NCBI nr
Match: XP_023545041.1 (uncharacterized protein LOC111804467 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 115.5 bits (288), Expect = 9.8e-23 Identity = 96/96 (100.00%), Postives = 96/96 (100.00%), Query Frame = 0
BLAST of Carg00897 vs. NCBI nr
Match: XP_022950290.1 (uncharacterized protein LOC111453422 [Cucurbita moschata]) HSP 1 Score: 114.4 bits (285), Expect = 2.2e-22 Identity = 95/96 (98.96%), Postives = 96/96 (100.00%), Query Frame = 0
BLAST of Carg00897 vs. NCBI nr
Match: XP_022977957.1 (uncharacterized protein LOC111478092 [Cucurbita maxima]) HSP 1 Score: 114.4 bits (285), Expect = 2.2e-22 Identity = 94/96 (97.92%), Postives = 95/96 (98.96%), Query Frame = 0
BLAST of Carg00897 vs. NCBI nr
Match: XP_004141960.1 (PREDICTED: uncharacterized protein LOC101206523 [Cucumis sativus] >KGN48437.1 hypothetical protein Csa_6G487580 [Cucumis sativus]) HSP 1 Score: 113.6 bits (283), Expect = 3.7e-22 Identity = 92/96 (95.83%), Postives = 94/96 (97.92%), Query Frame = 0
BLAST of Carg00897 vs. NCBI nr
Match: XP_022133053.1 (uncharacterized protein LOC111005740 isoform X2 [Momordica charantia]) HSP 1 Score: 112.1 bits (279), Expect = 1.1e-21 Identity = 69/96 (71.88%), Postives = 70/96 (72.92%), Query Frame = 0
BLAST of Carg00897 vs. TAIR10
Match: AT5G09960.1 (FUNCTIONS IN: molecular_function unknown) HSP 1 Score: 87.8 bits (216), Expect = 4.0e-18 Identity = 51/105 (48.57%), Postives = 54/105 (51.43%), Query Frame = 0
BLAST of Carg00897 vs. TAIR10
Match: AT5G64850.1 (FUNCTIONS IN: molecular_function unknown) HSP 1 Score: 83.6 bits (205), Expect = 7.5e-17 Identity = 69/107 (64.49%), Postives = 71/107 (66.36%), Query Frame = 0
BLAST of Carg00897 vs. TAIR10
Match: AT5G19473.1 (RPM1-interacting protein 4 (RIN4) family protein) HSP 1 Score: 56.2 bits (134), Expect = 1.3e-08 Identity = 28/50 (56.00%), Postives = 33/50 (66.00%), Query Frame = 0
BLAST of Carg00897 vs. TrEMBL
Match: tr|A0A0A0KJ83|A0A0A0KJ83_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G487580 PE=4 SV=1) HSP 1 Score: 113.6 bits (283), Expect = 2.5e-22 Identity = 92/96 (95.83%), Postives = 94/96 (97.92%), Query Frame = 0
BLAST of Carg00897 vs. TrEMBL
Match: tr|A0A1S3B0G0|A0A1S3B0G0_CUCME (uncharacterized protein LOC103484698 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103484698 PE=4 SV=1) HSP 1 Score: 107.1 bits (266), Expect = 2.3e-20 Identity = 93/97 (95.88%), Postives = 95/97 (97.94%), Query Frame = 0
BLAST of Carg00897 vs. TrEMBL
Match: tr|A0A1S3B006|A0A1S3B006_CUCME (uncharacterized protein LOC103484698 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103484698 PE=4 SV=1) HSP 1 Score: 107.1 bits (266), Expect = 2.3e-20 Identity = 93/97 (95.88%), Postives = 95/97 (97.94%), Query Frame = 0
BLAST of Carg00897 vs. TrEMBL
Match: tr|A0A2I4H1Y4|A0A2I4H1Y4_9ROSI (uncharacterized protein LOC109012786 isoform X3 OS=Juglans regia OX=51240 GN=LOC109012786 PE=4 SV=1) HSP 1 Score: 103.6 bits (257), Expect = 2.5e-19 Identity = 83/96 (86.46%), Postives = 87/96 (90.62%), Query Frame = 0
BLAST of Carg00897 vs. TrEMBL
Match: tr|A0A059AL03|A0A059AL03_EUCGR (Uncharacterized protein (Fragment) OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_I003201 PE=4 SV=1) HSP 1 Score: 103.2 bits (256), Expect = 3.3e-19 Identity = 55/96 (57.29%), Postives = 57/96 (59.38%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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