Csa6G487580 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa6G487580
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionEmb|CAB61744.1
LocationChr6 : 22857562 .. 22861660 (+)
Genome Viewer
Gene Expression
   



Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ACAATACAACTGTAAAAGCCTGAGAAACAGCGAAGGCCACTTAGACTAGTGCGTGCAGTAGTGGCATTCTCGTAATATTGCAAAGCGCAGAGACCCACTATCGTCAATTCATACACCTTTATATATACACTCAACAGAGTCTTTTCTGTTTTTTCTTTTTTACTTTTATCTAACGAAGAAGAAGAAGAAGAAGAATATAAGAATTGCAGTGTCGTTGCCCGCTGCTTCTTCTTTGCTTCTGCTCTACGCTTTCACTCTCAATCCTTTTTGCTTAGTATACAACTTCAAACTCTCCTCCTTTTTGCTTCAATCGTTTTCTTCTCCGGTGTTCTTCGTTGAGAACTTGCATATGGATGATCGGAAGGAGGTTGTTGTTTTTGCTTTACTGCTTTTTGTGGTTTTCTTGTTCTGTTTTTGTCGATGTTTATTTTTTCCGTTCAGAAACTTAGGTTTTTTGCTAGTTACAGAGTGGAAATGCATAGATTTCTTGATCCGAGTTTAATTGTACGGTGGGACTTTTGGAGAGCTGCGATTGTTGTCTCTTTGGTGTTTAGACCTCGCCTGATGAAAACGATCATAGAAACAGTATAATTTTATTATTATCAGTGTTTTTTTCCTGGTCAAACTGTGAATTAAATGTTGCTCTGTTATTTGTTTCTTTTGAGCGAAATCGTCGCTAGTTTCGTGGCGTTTTATCTTGCACATGCACTGGTATTTCCTTCCATTCTGTTCCTTGGAATTTGATATTTGATATATACTTTTTCTTTTACCTTATACTTTTGCCTCTTTCGGTCCGAATTGCTCACATTGCTTTTAAAATTCAGAAACGTAATTTGATTTGTTAGTTAGCTTGTTTGGATTTGGACGTATTTGTTTTTGTCACGGGAGCAATTAGCGTTATGCTTTTGCTTTTTAACCGTTTATGATTAATTCACGGAGACAATCGTGTTACTTTTCTAAGCTGGGAAGCAGCCAAACTTATCAACTTTTTCCTCCATCCTCTTGCCGATTATTTTCCTTGGTTCCAAAATTTCAACGCTTTAGCCGATAGGTTTCATTCAGCTGCTCTTCTATTTCAACTATTGACTTTTTGTTTATTTATTTATATTTTAGCATGTTCTGAAGACTGAAGAATAGAATTTTAGAAAAGTTGCTGTCACTGACTTCGAAATTGGAAATTTTATCCAATTATTGCACTCTGCTTATAACGAATCAAAATTTAATTTGATTCATAAGAGAAACTTAATTTCTGGCTCCAATAAGATAGCAATTAGATTTCTTTTCTCATTGTCTTTTGTGAATACTAAATTACTAATAAGACAAGACTAATAAATTAGACAATGAGAGGTTTATGTGCAAACCTCTGATGTGGTGTGTGCTTTAGGCTTTAGCCTTTAGGTGACAATAAATACTTCAGTTAGAGCTGAAATGAGTTTAGCTCAGTAATTGGCATGGTTTTCTAGAGGTTTGAGGTTGGATCTTCATCCCACGTTTATTATACTGAAAAAATGTTAGTTGTAGAAAATTGAAAAGCTGTAGAACTTTTAATTCGTGTTTTAACTTCGAACTTCTTTATTTTTCCCGAAAAAAAAAAAAAACGTAAATGTAACTGACATTCTTGGCTTCAACTTTGAGATACGTTACTTTTTTTTTCCTACAGAAAACTGCTCCCTGGCTTTCAGTGCCACAATTTGGAGACTGGGACCAGAAGGGACAGCTGCCTGATTACTCGCTTGATTTCTCAAAACTTAGGGAAAATAGGAAACAAAACAAGAGAGACGTGTCTCGGGCGAGTCTTGGAAATGAAGAGGAGCTCATTGCCAAAGCCGCACCCCCAACGACAACAGACACTTTCCCTACTGATAATCATCACCCTTATCATCAGAATCACCACTCCCCACCAGTAAGATTTTCGCTTCTCCCTAAAATTTCATATTGGTTATTTTTTATTATTTGATAGGGACTTGCATGTTCTTCTAAACAAATACCGTTTGGACAACTCAAGAATTTGTTGGGTTGGGTTTGGGTTGGGTTACATCAATGTGTTGTATGTGGCCTTGAAGGTTCTTTATCAAACTTGTGGGTCCATGCTGGTTGCTATTATCTGTTAACTTGTGGATACAGCTATTGATTGTGGAAAAATCAACAAAAGAAATATTTTCCTGAAGTGTCATCTAATTTTATGATGAATAAGCTAATGAAGGTTTTAACTATTCGTATATTAGTTCTCCTATCCTAAATATTGTAGGCTGAGGTAGTTATTGTTAGTTACATATATATTTTGAAAAAAGATCCCAGTGACATGTCATATTTGCATGTTCATGTATATATATTTTCATGAGCACATGTCTTTCTATTCCATATCACGATGGCTTTGAAATCTAGTCAATGTGGTTCCTTCTCCATTGTTTAACTGCCAGAGTTAACCATTGGTGTCGCTATTTGGAATAATTTGAAGGTCATCTCTTATATTGGCAAAGTGAACAAGCTCAAGATGCTTCAGTTTATTTAAGAGAATTCTTATTTACTCTCTGTTAGCGTGAATCGTGTTTGTACTCTGTAATAATATATCTTAGGCCTTGTTTCATGGCATACAAATTAAATAAGAATAATAAAACCACTTGTGAGGGGGGGGCATCGTTCAGATTTTATGTGGATAGTGTGTATTGTTCAATTAGAATGAGGTGAGATGTCGACTTAAAGTTGCATTTGTGGAAACAAGTTGGGGGCTGGGTCCCCCTTTGCCCCTAACCCACTAGTAAGAGCATTACTTGTGGGCATTCATATGGTATTTGCTGCCACATTTGTCATAGATTAAAATTGGGGGTAGTAGTAATTCATAGATCCTATCTCATATTTAAGAATGGCTGAACAGGTTTTCTTTTTCTTATGTGGGGAAGGTGAAGAGAAGCACATTTTCCCCCTACCAAGGACAGATTCTAACTTGTGTCAATGTTGAACTTTATTCTATTTCTTTCAGTTTCAATTTGGTAGTTTAATTAGCTAAATAAAAGGTGCTCGAGATGTTTTTGGTCTATTGGTTTATTGTGGCTGACCAACCTCCTGATGTGGTGTAGTCTTACATGTAAATTTCTTGGTTTCAATTGAAAGGGACGGTGATCATATTTTGGATTTGGAGGGTCAGCCACAGTATGCTGACATTTAACCCATCTTTGATCACCCTCTGTATATGCTTTGTATATCTATGTTTTTTCATACTACCCCCATTAATTTCTTTCTAAATATATCATTTAACGGGGTGTTAAATTACGAGTGAGAGTCCTAAGGTCCATTAAGAAACGGTTAATTGCACCACACCAAACCACATTAATTGCTTCGTACAAACCATTATCTAAATTCATACAGTATAGATGGGGTGCTGGTTGGTTTGCCTAGTCAGAAATGGAATGAAAAATAATAAATGAGTACTTTTTACAATTCTATTTTTATTTTATTATCAGCTAAAATTATGTTTTAGATTTTTAATTGGTTTGGAATTTAGATATTTTACGTTAGGATTGACTGTCAACTTTATTTGTATTAAAAATTATTTAGGTATGAGATCTTGGGTAAATTGTACAAAACAGTGGGACCTTATTCGTTTTTTGAGCAAGTATGGAAAGTGTCCATTTTTGTATGATTCTTACATGTTTATGCTTTTGATTGTTCTGGCAGACAAGAAAGAGCATTTTAAGTTGCTTCAACTGCTGCGTGAAAGCTTGAATTAAGTAAAAGGTCTGTCTTGAAGATGACCTCTGCAGGCCCACTTGTAAGTTTAAATGTCATTGTATTAATTGCTTTGGTACGAATACCTCTATTCTCCTTTATTTGAATTAGAACAATTGTATTATATGTTTGGATTTTGTATGATGGCTTTGTTCTTGCCAGTGGCAGCAGCTACTGTTTCATTATTTTTGTCTCTAATTAATCCATTAGTTATAGAATCCATTTGGAATGACTCTCTCGAGGATCTGGAATCTTAAACATTTAGTCTGCTTAAGCCCACTTCAGACTCGAACACCCTAATGAGGGGCAATTTGAATTGCACCATTGGAGTGGGTCATCATAGCACATTTCATGTTTTGGGCAGTAATCTGTA

mRNA sequence

ATGGATGATCGGAAGGAGAAAACTGCTCCCTGGCTTTCAGTGCCACAATTTGGAGACTGGGACCAGAAGGGACAGCTGCCTGATTACTCGCTTGATTTCTCAAAACTTAGGGAAAATAGGAAACAAAACAAGAGAGACGTGTCTCGGGCGAGTCTTGGAAATGAAGAGGAGCTCATTGCCAAAGCCGCACCCCCAACGACAACAGACACTTTCCCTACTGATAATCATCACCCTTATCATCAGAATCACCACTCCCCACCAACAAGAAAGAGCATTTTAAGTTGCTTCAACTGCTGCGTGAAAGCTTGA

Coding sequence (CDS)

ATGGATGATCGGAAGGAGAAAACTGCTCCCTGGCTTTCAGTGCCACAATTTGGAGACTGGGACCAGAAGGGACAGCTGCCTGATTACTCGCTTGATTTCTCAAAACTTAGGGAAAATAGGAAACAAAACAAGAGAGACGTGTCTCGGGCGAGTCTTGGAAATGAAGAGGAGCTCATTGCCAAAGCCGCACCCCCAACGACAACAGACACTTTCCCTACTGATAATCATCACCCTTATCATCAGAATCACCACTCCCCACCAACAAGAAAGAGCATTTTAAGTTGCTTCAACTGCTGCGTGAAAGCTTGA

Protein sequence

MDDRKEKTAPWLSVPQFGDWDQKGQLPDYSLDFSKLRENRKQNKRDVSRASLGNEEELIAKAAPPTTTDTFPTDNHHPYHQNHHSPPTRKSILSCFNCCVKA*
Homology
[Close]
BLAST of Csa6G487580 vs. TrEMBL
Match: A0A0A0KJ83_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G487580 PE=4 SV=1)

HSP 1 Score: 223.0 bits (567), Expect = 1.7e-55
Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 1 

Query: 1   MDDRKEKTAPWLSVPQFGDWDQKGQLPDYSLDFSKLRENRKQNKRDVSRASLGNEEELIA 60
           MDDRKEKTAPWLSVPQFGDWDQKGQLPDYSLDFSKLRENRKQNKRDVSRASLGNEEELIA
Sbjct: 1   MDDRKEKTAPWLSVPQFGDWDQKGQLPDYSLDFSKLRENRKQNKRDVSRASLGNEEELIA 60

Query: 61  KAAPPTTTDTFPTDNHHPYHQNHHSPPTRKSILSCFNCCVKA 103
           KAAPPTTTDTFPTDNHHPYHQNHHSPPTRKSILSCFNCCVKA
Sbjct: 61  KAAPPTTTDTFPTDNHHPYHQNHHSPPTRKSILSCFNCCVKA 102

[Close]
BLAST of Csa6G487580 vs. TrEMBL
Match: A0A059AL03_EUCGR (Uncharacterized protein (Fragment) OS=Eucalyptus grandis GN=EUGRSUZ_I003201 PE=4 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 4.5e-37
Identity = 78/103 (75.73%), Postives = 86/103 (83.50%), Query Frame = 1 

Query: 1   MDDRKEKTAPWLSVPQFGDWDQKGQLPDYSLDFSKLRENRKQNKRDVSRASLGNEEELI- 60
           M+DRKEK  PWLSVPQFGDWDQKGQ+PDYSLDFSK+RE RKQNKRDVSRAS+GNEEEL  
Sbjct: 19  MEDRKEKNTPWLSVPQFGDWDQKGQVPDYSLDFSKIRETRKQNKRDVSRASIGNEEELAS 78

Query: 61  AKAAPPTTTDTFPTDNHHPYHQNHHSPPTRKSILSCFNCCVKA 103
           +K   PT T   P D HH YH++  SPPTR+SILSCFNCCVKA
Sbjct: 79  SKTVAPTAT---PDDGHH-YHESDPSPPTRRSILSCFNCCVKA 117

[Close]
BLAST of Csa6G487580 vs. TrEMBL
Match: D7SW64_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0031g01630 PE=4 SV=1)

HSP 1 Score: 161.4 bits (407), Expect = 5.9e-37
Identity = 81/103 (78.64%), Postives = 89/103 (86.41%), Query Frame = 1 

Query: 1   MDDRKEKTAPWLSVPQFGDWDQKGQLPDYSLDFSKLRENRKQNKRDVSRASLGNEEELIA 60
           M+DRKEK APWLSVPQFGDWDQKGQ+PDYSLDFSK+RE RKQNKRDVSRASLGNEEEL+ 
Sbjct: 1   MEDRKEKAAPWLSVPQFGDWDQKGQVPDYSLDFSKIREMRKQNKRDVSRASLGNEEELV- 60

Query: 61  KAAPPTT-TDTFPTDNHHPYHQNHHSPPTRKSILSCFNCCVKA 103
             APPTT  DT  TD+HH YHQ+ HSP  R+SIL CF+CCVKA
Sbjct: 61  --APPTTNADTRQTDHHH-YHQS-HSPTGRRSILGCFSCCVKA 98

[Close]
BLAST of Csa6G487580 vs. TrEMBL
Match: M5WKN7_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013840mg PE=4 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 2.3e-36
Identity = 78/103 (75.73%), Postives = 85/103 (82.52%), Query Frame = 1 

Query: 1   MDDRKEKTAPWLSVPQFGDWDQKGQLPDYSLDFSKLRENRKQNKRDVSRASLGNEEELIA 60
           M+DRKEK APWLSVPQFGDWDQKGQ+PDYSLDFSK+RE RKQNKRDVSRASLGNEEELI 
Sbjct: 1   MEDRKEKNAPWLSVPQFGDWDQKGQVPDYSLDFSKIREMRKQNKRDVSRASLGNEEELI- 60

Query: 61  KAAPPTTTDTFPTDNHHP-YHQNHHSPPTRKSILSCFNCCVKA 103
             A  T     P ++HHP YHQ HHSP TR+SI S FNCCV+A
Sbjct: 61  --ATNTANVEPPHNDHHPHYHQRHHSPTTRRSIFSYFNCCVRA 100

[Close]
BLAST of Csa6G487580 vs. TrEMBL
Match: A0A0D2QFP8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_003G047500 PE=4 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 3.8e-36
Identity = 77/103 (74.76%), Postives = 84/103 (81.55%), Query Frame = 1 

Query: 1   MDDRKEKTAPWLSVPQFGDWDQKGQLPDYSLDFSKLRENRKQNKRDVSRASLGNEEELIA 60
           M+DRKEK APWLSVPQFGDWDQKGQ+PDYSLDFSK+RE RKQNKR+VSRASLGNEEE I 
Sbjct: 1   MEDRKEKNAPWLSVPQFGDWDQKGQVPDYSLDFSKIREMRKQNKREVSRASLGNEEEFIN 60

Query: 61  KAAPPTTTDTFPT-DNHHPYHQNHHSPPTRKSILSCFNCCVKA 103
             A   T  T P+ D+HH Y QNHHSP TR+S  S FNCCVKA
Sbjct: 61  PTA--NTVSTTPSDDHHHNYPQNHHSPSTRRSFFSYFNCCVKA 101

[Close]
BLAST of Csa6G487580 vs. TAIR10
Match: AT5G09960.1 (AT5G09960.1 FUNCTIONS IN: molecular_function unknown)

HSP 1 Score: 137.5 bits (345), Expect = 4.6e-33
Identity = 69/110 (62.73%), Postives = 78/110 (70.91%), Query Frame = 1 

Query: 2   DDRKEKTAPWLSVPQFGDWDQKG--QLPDYSLDFSKLRENRKQNKRDVSRASLGNEEELI 61
           DDRKEK  PWLSVPQFGDWDQKG   +PDYS+DF+K+RE RKQNKRD SRASLGNEEELI
Sbjct: 3   DDRKEKNTPWLSVPQFGDWDQKGGGTMPDYSMDFTKIREMRKQNKRDPSRASLGNEEELI 62

Query: 62  AKAAPPTTT---DTFPTDNHHPYHQNH----HSPPTRKSILSCFNCCVKA 103
                 T+T    T  ++N   +  +H    HSP TR+S+ SCFNCCVKA
Sbjct: 63  KPPESATSTAELTTVQSENQREFSPSHHHQPHSPSTRRSMFSCFNCCVKA 112

[Close]
BLAST of Csa6G487580 vs. TAIR10
Match: AT5G64850.1 (AT5G64850.1 FUNCTIONS IN: molecular_function unknown)

HSP 1 Score: 127.5 bits (319), Expect = 4.8e-30
Identity = 68/114 (59.65%), Postives = 75/114 (65.79%), Query Frame = 1 

Query: 1   MDDRKE-KTAPWLSVPQFGDWDQKGQLPDYSLDFSKLRENRKQNKRDVSRASLGNEEELI 60
           M+DRKE K +PWLSVPQFGDWDQKG   DYS+DFSK+RE RK NKRD SRASLGNEEELI
Sbjct: 1   MEDRKENKNSPWLSVPQFGDWDQKGGSIDYSMDFSKIREMRKLNKRDASRASLGNEEELI 60

Query: 61  --------AKAAPPTTTDTFPTDNHHP---YHQNHHSPPTRKSILSCFNCCVKA 103
                      A P    T  +DN++     H + HSP  R+ I SCFNCCVKA
Sbjct: 61  NPFHDQPPVDTAKPKKLTTVHSDNNNRNEFSHHHPHSPSRRRRIFSCFNCCVKA 114

[Close]
BLAST of Csa6G487580 vs. TAIR10
Match: AT5G19473.1 (AT5G19473.1 RPM1-interacting protein 4 (RIN4) family protein)

HSP 1 Score: 77.8 bits (190), Expect = 4.4e-15
Identity = 42/106 (39.62%), Postives = 54/106 (50.94%), Query Frame = 1 

Query: 3   DRKEKTAPWLSVPQFGDWDQKG--QLPDYSLDFSKLRENRKQNKRDVSRASLGNEEELIA 62
           D++ + A W  VPQFG WDQKG     +YS+ FSK R NRKQNK  V  +SLG+E+EL+ 
Sbjct: 2   DKRRENAAWTPVPQFGGWDQKGPNDATNYSVVFSKARANRKQNKAGVRHSSLGSEQELMV 61

Query: 63  KAAPPTTTDTFPTDNHHPYHQNHHSPP-----TRKSILSCFNCCVK 102
                         NH   H  H +        +K IL+  NCC++
Sbjct: 62  SV----------RRNHQQLHHRHETQDDDPVMKKKRILTYINCCIR 97

[Close]
BLAST of Csa6G487580 vs. NCBI nr
Match: gi|449448412|ref|XP_004141960.1| (PREDICTED: uncharacterized protein LOC101206523 [Cucumis sativus])

HSP 1 Score: 223.0 bits (567), Expect = 2.4e-55
Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 1 

Query: 1   MDDRKEKTAPWLSVPQFGDWDQKGQLPDYSLDFSKLRENRKQNKRDVSRASLGNEEELIA 60
           MDDRKEKTAPWLSVPQFGDWDQKGQLPDYSLDFSKLRENRKQNKRDVSRASLGNEEELIA
Sbjct: 1   MDDRKEKTAPWLSVPQFGDWDQKGQLPDYSLDFSKLRENRKQNKRDVSRASLGNEEELIA 60

Query: 61  KAAPPTTTDTFPTDNHHPYHQNHHSPPTRKSILSCFNCCVKA 103
           KAAPPTTTDTFPTDNHHPYHQNHHSPPTRKSILSCFNCCVKA
Sbjct: 61  KAAPPTTTDTFPTDNHHPYHQNHHSPPTRKSILSCFNCCVKA 102

[Close]
BLAST of Csa6G487580 vs. NCBI nr
Match: gi|659079228|ref|XP_008440144.1| (PREDICTED: uncharacterized protein LOC103484698 isoform X2 [Cucumis melo])

HSP 1 Score: 213.0 bits (541), Expect = 2.5e-52
Identity = 99/103 (96.12%), Postives = 101/103 (98.06%), Query Frame = 1 

Query: 1   MDDRKEKTAPWLSVPQFGDWDQKGQLPDYSLDFSKLRENRKQNKRDVSRASLGNEEELIA 60
           MDDRKEKTAPWLSVPQFGDWDQKGQLPDYSLDFSKLRENRKQNKRDVSRASLGNEEELIA
Sbjct: 1   MDDRKEKTAPWLSVPQFGDWDQKGQLPDYSLDFSKLRENRKQNKRDVSRASLGNEEELIA 60

Query: 61  KAAPPTTTDTFPTDNHHPY-HQNHHSPPTRKSILSCFNCCVKA 103
           KAAPPTTTD+FPTDNHHPY HQ+HH PPTRKSILSCFNCCVKA
Sbjct: 61  KAAPPTTTDSFPTDNHHPYHHQSHHPPPTRKSILSCFNCCVKA 103

[Close]
BLAST of Csa6G487580 vs. NCBI nr
Match: gi|659079226|ref|XP_008440143.1| (PREDICTED: uncharacterized protein LOC103484698 isoform X1 [Cucumis melo])

HSP 1 Score: 203.4 bits (516), Expect = 2.0e-49
Identity = 94/99 (94.95%), Postives = 97/99 (97.98%), Query Frame = 1 

Query: 5   KEKTAPWLSVPQFGDWDQKGQLPDYSLDFSKLRENRKQNKRDVSRASLGNEEELIAKAAP 64
           +EKTAPWLSVPQFGDWDQKGQLPDYSLDFSKLRENRKQNKRDVSRASLGNEEELIAKAAP
Sbjct: 10  REKTAPWLSVPQFGDWDQKGQLPDYSLDFSKLRENRKQNKRDVSRASLGNEEELIAKAAP 69

Query: 65  PTTTDTFPTDNHHPY-HQNHHSPPTRKSILSCFNCCVKA 103
           PTTTD+FPTDNHHPY HQ+HH PPTRKSILSCFNCCVKA
Sbjct: 70  PTTTDSFPTDNHHPYHHQSHHPPPTRKSILSCFNCCVKA 108

[Close]
BLAST of Csa6G487580 vs. NCBI nr
Match: gi|629088113|gb|KCW54366.1| (hypothetical protein EUGRSUZ_I003201, partial [Eucalyptus grandis])

HSP 1 Score: 161.8 bits (408), Expect = 6.5e-37
Identity = 78/103 (75.73%), Postives = 86/103 (83.50%), Query Frame = 1 

Query: 1   MDDRKEKTAPWLSVPQFGDWDQKGQLPDYSLDFSKLRENRKQNKRDVSRASLGNEEELI- 60
           M+DRKEK  PWLSVPQFGDWDQKGQ+PDYSLDFSK+RE RKQNKRDVSRAS+GNEEEL  
Sbjct: 19  MEDRKEKNTPWLSVPQFGDWDQKGQVPDYSLDFSKIRETRKQNKRDVSRASIGNEEELAS 78

Query: 61  AKAAPPTTTDTFPTDNHHPYHQNHHSPPTRKSILSCFNCCVKA 103
           +K   PT T   P D HH YH++  SPPTR+SILSCFNCCVKA
Sbjct: 79  SKTVAPTAT---PDDGHH-YHESDPSPPTRRSILSCFNCCVKA 117

[Close]
BLAST of Csa6G487580 vs. NCBI nr
Match: gi|702459523|ref|XP_010027770.1| (PREDICTED: uncharacterized protein LOC104418198 isoform X2 [Eucalyptus grandis])

HSP 1 Score: 161.8 bits (408), Expect = 6.5e-37
Identity = 78/103 (75.73%), Postives = 86/103 (83.50%), Query Frame = 1 

Query: 1   MDDRKEKTAPWLSVPQFGDWDQKGQLPDYSLDFSKLRENRKQNKRDVSRASLGNEEELI- 60
           M+DRKEK  PWLSVPQFGDWDQKGQ+PDYSLDFSK+RE RKQNKRDVSRAS+GNEEEL  
Sbjct: 1   MEDRKEKNTPWLSVPQFGDWDQKGQVPDYSLDFSKIRETRKQNKRDVSRASIGNEEELAS 60

Query: 61  AKAAPPTTTDTFPTDNHHPYHQNHHSPPTRKSILSCFNCCVKA 103
           +K   PT T   P D HH YH++  SPPTR+SILSCFNCCVKA
Sbjct: 61  SKTVAPTAT---PDDGHH-YHESDPSPPTRRSILSCFNCCVKA 99

The following BLAST results are available for this feature:
BLAST of Csa6G487580 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KJ83_CUCSA1.7e-55100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_6G487580 PE=4 SV=1[more]
A0A059AL03_EUCGR4.5e-3775.73Uncharacterized protein (Fragment) OS=Eucalyptus grandis GN=EUGRSUZ_I003201 PE=4... [more]
D7SW64_VITVI5.9e-3778.64Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0031g01630 PE=4 SV=... [more]
M5WKN7_PRUPE2.3e-3675.73Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013840mg PE=4 SV=1[more]
A0A0D2QFP8_GOSRA3.8e-3674.76Uncharacterized protein OS=Gossypium raimondii GN=B456_003G047500 PE=4 SV=1[more]
BLAST of Csa6G487580 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G09960.14.6e-3362.73 FUNCTIONS IN: molecular_function unknown[more]
AT5G64850.14.8e-3059.65 FUNCTIONS IN: molecular_function unknown[more]
AT5G19473.14.4e-1539.62 RPM1-interacting protein 4 (RIN4) family protein[more]
BLAST of Csa6G487580 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449448412|ref|XP_004141960.1|2.4e-55100.00PREDICTED: uncharacterized protein LOC101206523 [Cucumis sativus][more]
gi|659079228|ref|XP_008440144.1|2.5e-5296.12PREDICTED: uncharacterized protein LOC103484698 isoform X2 [Cucumis melo][more]
gi|659079226|ref|XP_008440143.1|2.0e-4994.95PREDICTED: uncharacterized protein LOC103484698 isoform X1 [Cucumis melo][more]
gi|629088113|gb|KCW54366.1|6.5e-3775.73hypothetical protein EUGRSUZ_I003201, partial [Eucalyptus grandis][more]
gi|702459523|ref|XP_010027770.1|6.5e-3775.73PREDICTED: uncharacterized protein LOC104418198 isoform X2 [Eucalyptus grandis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU096550cucumber EST collection version 3.0transcribed_cluster
CU097443cucumber EST collection version 3.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa6G487580.1Csa6G487580.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU097443CU097443transcribed_cluster
CU096550CU096550transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33882FAMILY NOT NAMEDcoord: 1..102
score: 4.0

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa6G487580Cla008500Watermelon (97103) v1cuwmB502
Csa6G487580MELO3C020960Melon (DHL92) v3.5.1cumeB434
Csa6G487580MELO3C007484Melon (DHL92) v3.5.1cumeB503
Csa6G487580ClCG01G016140Watermelon (Charleston Gray)cuwcgB432
Csa6G487580ClCG02G001020Watermelon (Charleston Gray)cuwcgB447
Csa6G487580Lsi01G010600Bottle gourd (USVL1VR-Ls)culsiB434
Csa6G487580MELO3C020960.2Melon (DHL92) v3.6.1cumedB414
Csa6G487580MELO3C007484.2Melon (DHL92) v3.6.1cumedB483
Csa6G487580Cla97C02G027420Watermelon (97103) v2cuwmbB437
Csa6G487580Cla97C01G015130Watermelon (97103) v2cuwmbB412
Csa6G487580Bhi03G001537Wax gourdcuwgoB630
Csa6G487580Bhi10G001876Wax gourdcuwgoB615
Csa6G487580CSPI02G15140Wild cucumber (PI 183967)cpicuB092
Csa6G487580CSPI06G27280Wild cucumber (PI 183967)cpicuB313
Csa6G487580Cucsa.250380Cucumber (Gy14) v1cgycuB359
Csa6G487580Cucsa.101650Cucumber (Gy14) v1cgycuB121
Csa6G487580CmaCh07G007590Cucurbita maxima (Rimu)cmacuB877
Csa6G487580CmaCh03G010400Cucurbita maxima (Rimu)cmacuB681
Csa6G487580CmaCh02G005990Cucurbita maxima (Rimu)cmacuB627
Csa6G487580CmoCh07G007800Cucurbita moschata (Rifu)cmocuB865
Csa6G487580CmoCh02G006020Cucurbita moschata (Rifu)cmocuB619
Csa6G487580CmoCh03G010400Cucurbita moschata (Rifu)cmocuB670
Csa6G487580Cp4.1LG05g10910Cucurbita pepo (Zucchini)cpecuB764
Csa6G487580Cp4.1LG19g11780Cucurbita pepo (Zucchini)cpecuB503
Csa6G487580CsGy6G026660Cucumber (Gy14) v2cgybcuB281
Csa6G487580Carg05267Silver-seed gourdcarcuB0826
Csa6G487580Carg00897Silver-seed gourdcarcuB0441
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Csa6G487580Csa2G297140Cucumber (Chinese Long) v2cucuB074
The following block(s) are covering this gene:
GeneOrganismBlock
Csa6G487580Cucurbita moschata (Rifu)cmocuB550
Csa6G487580Watermelon (97103) v1cuwmB531
Csa6G487580Cucurbita pepo (Zucchini)cpecuB085
Csa6G487580Cucumber (Gy14) v2cgybcuB084