Cucsa.250380 (gene) Cucumber (Gy14) v1

Overview
NameCucsa.250380
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionPathogenic type III effector avirulence factor Avr AvrRpt-cleavage: cleavage site protein
Locationscaffold02219 : 533343 .. 537445 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GTCATCGTTCTTAAATGAACCAAAaGAAAGCTTCATTTTTCAGTTCATTTGTCTCTCACTTTTTGCTGAATTCACAAGTGTTCAATCTCTCTCTTCGTTTTTGAATTCTGTCTCATGGAGGATCGCAAGGAGGTAATTCTTCTACTCATCTCTGTTTGGTTAACGATGATGATTCCGATCTCAGCTTGTTCTTGTTGGCTGTTGCTTTCTTTTTTGAGTATGAACATTAATAAAAGCTTTGAGGATTTGCTGAATTGAGTTTGTTAACTCCTGAAACTTAGATTGCACAGCTCACTTCTCTTGTTTTATTCAAACACATTGAGAATTCTGTAATTATTTTACTCGTTTTGATGCACTTTCTCCGCAACCAAAATAGAAGTTATTGAGTATTGAAAACACCGGTTTGTAGTATGTACAGGTTGATTTAACACTTCCTGAAGTTCGTTACGTTTTTTGGTTTAGCTTCGAAGTTCTGTAATTCGACCTTTAATGGTATCTTTTCCTAAATTCTCTGTTGATGTTCTGCGGTTCCTTACTTCTGTTGCTTCCGATTTCTCTTCTTTCAAGTTTCAATTCGTTTCTTCTTTAGCGAAATTTCAGTTCCTTTCATGTTCAGAATCTTTCGTCTATAAGTTTTCCCCTCCGTCTCTTGATTCTGATGTTACTCCGCTCTCCGACATTGAAATTGACGAATTATGGAGTCCAATCTAAGACTTGATTAGTTAGTTATCGGATGAAATTTCAGTGTGTTTAATGGATGTTAATTAAGGAATTTTTAATTCTAAGGTCGGTTCAATCTTTTGCAGCGGATAAGATTGGAAAATTGGGGGAGTTTTGTAGCAATGCTTCTGTCCTTTCAGATAATTAGGTTACTTCATTTTCTTACTTTCTCCGCCTGTACCTAAACGCGTAAACTTATTATAAACTACTTACCTCCATACTTATCTATTGAGTCTGAATCTATTCAAATCTTGGTTTTtATTAAATTGAACTATGAAATCAAGTAAACTAGTAATATGAATACTTTCTGAAGGAATTCTGTGGTGTATTATTGGATTAGGAGGTCTTTGCAATTATATTGAGTAGTTTAGATTTGTATTTGACATTGTATTGGTAAAAAATGGCGATAGTATTATGATTGATTGGTGCATCACATCAACTACATCGCTGAGGAAACTTAAAAGGCTTTGTTAAACAATCAGAAAGAGGAACTTTTGCTATATTGCAAAACCGTGGTTGGATAAGTGGTAGCTGCAATACTTTGATTTTGTGTAGTGTATTAGAAATGATTTGGAGTAGTGGTTTAAATAATGAAATAGAGAATGAATGAACAATTTTTTGATGCAGAAAGTTGCTCCCTGGATGAGTGTACCACAATTTGGGGATTGGGAGCAGAAGGGAGGGGTGCCTGATTATTCGGTTGATTTCTCAAAAATAAGGGAAAATAGGAAACAACACAAAAGGGATTTGTCAAGAGCAAGCATTGGGAATGAAGAGGAGCTAATGGCATCGTCAGCCACTCCCACCACTAACACACCTCATTCTCATGTTGATGAAAATCATCAATTGAATCCCACCAACAGCAACTCTCCAACGGTCAGATTCCTTTTTCTCATTACCTTTTTTTTCACTTTTAATTTTCCAGCTTTTACTTTAAGCATCTTTCCTTTTTCCTTGTGTGTGGGCATGCATGTGATATAACTGACCCCGCCCCTCAATAATTTATTCAATATGTTATTGTGGGAAAAaTTAACACAAAGATCAATCTTCTGTTCCACTTTTTTtCTATACCATGTTGAAACCCTTCTCCTACTTTACACTTTTGAGTTTTGACTAGGAAAGAGAAAACTAGAGAATaGAAAAaAAAAAaCAAAAAaCTACTTCGACATTAAGTCAGTATGGCTATTGAGTTTGTGATCAACATGACAATGGAGAAGAATAGAATGGTGTTTTTAGTGTACATTCGAGGAACGACCTTCCTTGTTTTtAGTCTTACCTCATGTAACTACTGTCCCATACTTTTATTGGTCTTTTTTAATTCTTCGAATCGAAGTAATAACTCGAATGGTTGCACTGCCATGGGTCCCACAAAAGTCTATTGATTGTGGGGTTTCTTCATAGGTCTTGGATTGTAGGTTCTTCCATGATTTGGCCAATTTTATTGGATCTGCCTTTTAAGGCCATACAAATTAAAATAAAGCAATAAAACCGGCGACACAAAACTATAGACCAGAAAAAATCTACTCTAAAAAATATTATAATCACGCAGTAATATCTCCTCAATCAAAACTACAAAAAGAGTCCCTCAAAGTGGCTATTAACACATTTTTTCCACTTGCAAACTAGAGAACGATTTAGTTCAAGTTAGAACACCAAAATTTAGAGTGTTTTTAATTAAGATAATTTAAAaCCAAAAGCATAAGTTTCTTTATAGTCCTTGGAGTTTTTAATTTTGTTGAACTTTTTtGATATAAGACAATTGCACTTTTAATATTTTGTCTAAATCCGATAATAGGTTGTATCACCTTTAGATCCTAGTCTTGTCTCATCGCTCTAAACCACCTCGATAATGCATTACATTCCTTCTTGTAGAATTGAAACCTATGACCATAAAAAGAAAAAGTCAAATATCTAACCATTTAACAATCTCTCCTTAACTTTTGTTTCATTTGCTTCCTCTTCAGCATGTCTGGCCTTAAATTATATATAGTCTCGACTTCCTAAACTTGGATGAACAATTTCCCAAACACTTTTATAGATTTTTATCTTAATGGGCCAAGAGGATGAGGATATGAAGAATATTGAGTAATTATTACAGAACAATCATTCACTCACATTCTCTTTTTCTAAAGAGAAAAAACTCTACTGGCTGGCAAAGTGCCATTGATGGGGATTTGTGTTTTGTCTAGGGAAAGCAAATTACCTTCTTCAGATCTCAGAATAGATTTTAGTGGTCCTTCTACCATTTAAATTTTtAAATAATATTTTGCTTAAATCTATCCTATTCTTATTTTAATCTATATACATTAATATTTATAACATATAGCAAACTTTAAGATTTTATTAATGATAAATATTGATGTCTTTCTATCACTATCTATCAATATGATAATGACTAATAGAAGTATATAAATATTTATTAGGGATAAAATCTCACCTTTGTTATATTTTGTAAACATTTTGTTAAATTTACCATTTTTtACAATTCTCCATATAAATATATATAGATAATTTTAAATGAAAAAACaGCTAAAACaTAAACAAAATTGATAGAAATCTATCGTAGATAGAATCTATATAAAaTTTtaGtCTATATATATATATATAGTTTTTTCTTtATTTTTTAtATAAACCCTGGAATTTCTTGTCCAATTCTAGAAACAAATTACCTTTGAGTTTTGAATATTGTTTTTTCTAGTTTTTGAAACTCGACTTTAGGAGGTGGACCATAAAACATAAAAACTTGTGTAAGAGGAGTGTTTATAAGAATAATTTTTAAAATAAAAAaTTTAAATGGTTATCAAATATTATATTATTCTCATTTATTTTGACAACAAAAAAAAaGTTTATAACATAAAACCCTGTATTATCTAATTTGATGTTGGTGCATAATTTATCATCTATTTACATACTCATTACCATTTAATAGAATCATGTAAAAGCATTAAAGAATATACTACAATTCTTAATACATTTTTTAAATGATAAAACCACTCAAAATATTTTCAAATATAGCAATATTGTAGCATCCATAGTTGATAGATAATGAGATATCTTTCTAAAAAAAGAAAAaGAAAAATAGACATTTATTAATGTCTATTTTGAAATAAATAACATTTTGTTATATCTAAATATTATTTTATTTTGTTATATTGAAAAACAGTTCATAATTGTATTAATTTCTGTTCAACAATTCAAATATTTCTTTTATGTTATTATTGATTTTTTTtCTCTACAAAAGATATATTGAAGTTGTAGTTGTAACTTACAACTTTTATTTTATGGCTTTTTTTtCTCTTTACAGACAAGGAAGAGCATATTGAGATACTTCAACTGTTGTGTGAAAGCATGATCGCAAACTCAAATTCACCAATCTTGATTTA

mRNA sequence

GTCATCGTTCTTAAATGAACCAAAAGAAAGCTTCATTTTTCAGTTCATTTGTCTCTCACTTTTTGCTGAATTCACAAGTGTTCAATCTCTCTCTTCGTTTTTGAATTCTGTCTCATGGAGGATCGCAAGGAGAAAGTTGCTCCCTGGATGAGTGTACCACAATTTGGGGATTGGGAGCAGAAGGGAGGGGTGCCTGATTATTCGGTTGATTTCTCAAAAATAAGGGAAAATAGGAAACAACACAAAAGGGATTTGTCAAGAGCAAGCATTGGGAATGAAGAGGAGCTAATGGCATCGTCAGCCACTCCCACCACTAACACACCTCATTCTCATGTTGATGAAAATCATCAATTGAATCCCACCAACAGCAACTCTCCAACGACAAGGAAGAGCATATTGAGATACTTCAACTGTTGTGTGAAAGCATGATCGCAAACTCAAATTCACCAATCTTGATTTA

Coding sequence (CDS)

ATGGAGGATCGCAAGGAGAAAGTTGCTCCCTGGATGAGTGTACCACAATTTGGGGATTGGGAGCAGAAGGGAGGGGTGCCTGATTATTCGGTTGATTTCTCAAAAATAAGGGAAAATAGGAAACAACACAAAAGGGATTTGTCAAGAGCAAGCATTGGGAATGAAGAGGAGCTAATGGCATCGTCAGCCACTCCCACCACTAACACACCTCATTCTCATGTTGATGAAAATCATCAATTGAATCCCACCAACAGCAACTCTCCAACGACAAGGAAGAGCATATTGAGATACTTCAACTGTTGTGTGAAAGCATGA

Protein sequence

MEDRKEKVAPWMSVPQFGDWEQKGGVPDYSVDFSKIRENRKQHKRDLSRASIGNEEELMASSATPTTNTPHSHVDENHQLNPTNSNSPTTRKSILRYFNCCVKA*
Homology
[Close]
BLAST of Cucsa.250380 vs. TrEMBL
Match: A0A0A0LJN9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G297140 PE=4 SV=1)

HSP 1 Score: 221.1 bits (562), Expect = 6.4e-55
Identity = 104/104 (100.00%), Postives = 104/104 (100.00%), Query Frame = 1 

Query: 1   MEDRKEKVAPWMSVPQFGDWEQKGGVPDYSVDFSKIRENRKQHKRDLSRASIGNEEELMA 60
           MEDRKEKVAPWMSVPQFGDWEQKGGVPDYSVDFSKIRENRKQHKRDLSRASIGNEEELMA
Sbjct: 1   MEDRKEKVAPWMSVPQFGDWEQKGGVPDYSVDFSKIRENRKQHKRDLSRASIGNEEELMA 60

Query: 61  SSATPTTNTPHSHVDENHQLNPTNSNSPTTRKSILRYFNCCVKA 105
           SSATPTTNTPHSHVDENHQLNPTNSNSPTTRKSILRYFNCCVKA
Sbjct: 61  SSATPTTNTPHSHVDENHQLNPTNSNSPTTRKSILRYFNCCVKA 104

[Close]
BLAST of Cucsa.250380 vs. TrEMBL
Match: A0A0A0KJ83_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G487580 PE=4 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 1.2e-32
Identity = 70/104 (67.31%), Postives = 84/104 (80.77%), Query Frame = 1 

Query: 1   MEDRKEKVAPWMSVPQFGDWEQKGGVPDYSVDFSKIRENRKQHKRDLSRASIGNEEELMA 60
           M+DRKEK APW+SVPQFGDW+QKG +PDYS+DFSK+RENRKQ+KRD+SRAS+GNEEEL+A
Sbjct: 1   MDDRKEKTAPWLSVPQFGDWDQKGQLPDYSLDFSKLRENRKQNKRDVSRASLGNEEELIA 60

Query: 61  SSATPTTNTPHSHVDENHQLNPTNSNSPTTRKSILRYFNCCVKA 105
            +A PTT    +   +NH     N +SP TRKSIL  FNCCVKA
Sbjct: 61  KAAPPTTT--DTFPTDNHHPYHQNHHSPPTRKSILSCFNCCVKA 102

[Close]
BLAST of Cucsa.250380 vs. TrEMBL
Match: V7AZC3_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_009G139200g PE=4 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 1.2e-32
Identity = 72/104 (69.23%), Postives = 84/104 (80.77%), Query Frame = 1 

Query: 1   MEDRKEKVAPWMSVPQFGDWEQKGGVPDYSVDFSKIRENRKQHKRDLSRASIGNEEELMA 60
           ME  KEK APW+SVPQFGDW+QKG VPDYS+DFSKIRE RKQ+K ++SRAS+GNEEELMA
Sbjct: 1   MEQSKEKNAPWLSVPQFGDWDQKGQVPDYSLDFSKIREMRKQNKTNISRASLGNEEELMA 60

Query: 61  SSATPTTNTPHSHVDENHQLNPTNSNSPTTRKSILRYFNCCVKA 105
           SS T  TNT HS  DE+   +   ++SPTTR+S L YFNCCVKA
Sbjct: 61  SSTTNNTNTVHS--DEHQHPHYHQTSSPTTRRSFLSYFNCCVKA 102

[Close]
BLAST of Cucsa.250380 vs. TrEMBL
Match: I1KBC1_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_06G146800 PE=4 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 1.2e-32
Identity = 71/104 (68.27%), Postives = 85/104 (81.73%), Query Frame = 1 

Query: 1   MEDRKEKVAPWMSVPQFGDWEQKGGVPDYSVDFSKIRENRKQHKRDLSRASIGNEEELMA 60
           ME  KEK APW+SVPQFGDW+QKG VPDYS+DFSKIRE RKQ+K ++SRAS+GNEEELMA
Sbjct: 1   MEQSKEKNAPWLSVPQFGDWDQKGQVPDYSLDFSKIREMRKQNKTNISRASLGNEEELMA 60

Query: 61  SSATPTTNTPHSHVDENHQLNPTNSNSPTTRKSILRYFNCCVKA 105
           SSAT  T+T HS  D++   +   +NSPTTR+S L YFNCC+KA
Sbjct: 61  SSATNNTSTVHS--DDHQHPHYHQTNSPTTRRSFLSYFNCCIKA 102

[Close]
BLAST of Cucsa.250380 vs. TrEMBL
Match: A0A0B2PPG0_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_011827 PE=4 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 1.2e-32
Identity = 71/104 (68.27%), Postives = 85/104 (81.73%), Query Frame = 1 

Query: 1   MEDRKEKVAPWMSVPQFGDWEQKGGVPDYSVDFSKIRENRKQHKRDLSRASIGNEEELMA 60
           ME  KEK APW+SVPQFGDW+QKG VPDYS+DFSKIRE RKQ+K ++SRAS+GNEEELMA
Sbjct: 1   MEQSKEKNAPWLSVPQFGDWDQKGQVPDYSLDFSKIREMRKQNKTNISRASLGNEEELMA 60

Query: 61  SSATPTTNTPHSHVDENHQLNPTNSNSPTTRKSILRYFNCCVKA 105
           SSAT  T+T HS  D++   +   +NSPTTR+S L YFNCC+KA
Sbjct: 61  SSATNNTSTVHS--DDHQHPHYHQTNSPTTRRSFLSYFNCCIKA 102

[Close]
BLAST of Cucsa.250380 vs. TAIR10
Match: AT5G09960.1 (AT5G09960.1 FUNCTIONS IN: molecular_function unknown)

HSP 1 Score: 122.1 bits (305), Expect = 2.1e-28
Identity = 62/110 (56.36%), Postives = 80/110 (72.73%), Query Frame = 1 

Query: 2   EDRKEKVAPWMSVPQFGDWEQKGG--VPDYSVDFSKIRENRKQHKRDLSRASIGNEEELM 61
           +DRKEK  PW+SVPQFGDW+QKGG  +PDYS+DF+KIRE RKQ+KRD SRAS+GNEEEL+
Sbjct: 3   DDRKEKNTPWLSVPQFGDWDQKGGGTMPDYSMDFTKIREMRKQNKRDPSRASLGNEEELI 62

Query: 62  --ASSATPTTNTPHSHVDENHQLNPTN---SNSPTTRKSILRYFNCCVKA 105
               SAT T        +   + +P++    +SP+TR+S+   FNCCVKA
Sbjct: 63  KPPESATSTAELTTVQSENQREFSPSHHHQPHSPSTRRSMFSCFNCCVKA 112

[Close]
BLAST of Cucsa.250380 vs. TAIR10
Match: AT5G64850.1 (AT5G64850.1 FUNCTIONS IN: molecular_function unknown)

HSP 1 Score: 115.5 bits (288), Expect = 1.9e-26
Identity = 62/114 (54.39%), Postives = 78/114 (68.42%), Query Frame = 1 

Query: 1   MEDRKE-KVAPWMSVPQFGDWEQKGGVPDYSVDFSKIRENRKQHKRDLSRASIGNEEELM 60
           MEDRKE K +PW+SVPQFGDW+QKGG  DYS+DFSKIRE RK +KRD SRAS+GNEEEL+
Sbjct: 1   MEDRKENKNSPWLSVPQFGDWDQKGGSIDYSMDFSKIREMRKLNKRDASRASLGNEEELI 60

Query: 61  --------ASSATP-TTNTPHSHVDENHQLNPTNSNSPTTRKSILRYFNCCVKA 105
                     +A P    T HS  +  ++ +  + +SP+ R+ I   FNCCVKA
Sbjct: 61  NPFHDQPPVDTAKPKKLTTVHSDNNNRNEFSHHHPHSPSRRRRIFSCFNCCVKA 114

[Close]
BLAST of Cucsa.250380 vs. TAIR10
Match: AT5G19473.1 (AT5G19473.1 RPM1-interacting protein 4 (RIN4) family protein)

HSP 1 Score: 78.2 bits (191), Expect = 3.4e-15
Identity = 40/103 (38.83%), Postives = 59/103 (57.28%), Query Frame = 1 

Query: 3   DRKEKVAPWMSVPQFGDWEQKG--GVPDYSVDFSKIRENRKQHKRDLSRASIGNEEELMA 62
           D++ + A W  VPQFG W+QKG     +YSV FSK R NRKQ+K  +  +S+G+E+ELM 
Sbjct: 2   DKRRENAAWTPVPQFGGWDQKGPNDATNYSVVFSKARANRKQNKAGVRHSSLGSEQELMV 61

Query: 63  SSATPTTNTPHSHVDENHQLNPTNSNSPTTRKSILRYFNCCVK 104
           S          +H   +H+    + +    +K IL Y NCC++
Sbjct: 62  S-------VRRNHQQLHHRHETQDDDPVMKKKRILTYINCCIR 97

[Close]
BLAST of Cucsa.250380 vs. NCBI nr
Match: gi|449461437|ref|XP_004148448.1| (PREDICTED: uncharacterized protein LOC101211284 [Cucumis sativus])

HSP 1 Score: 221.1 bits (562), Expect = 9.2e-55
Identity = 104/104 (100.00%), Postives = 104/104 (100.00%), Query Frame = 1 

Query: 1   MEDRKEKVAPWMSVPQFGDWEQKGGVPDYSVDFSKIRENRKQHKRDLSRASIGNEEELMA 60
           MEDRKEKVAPWMSVPQFGDWEQKGGVPDYSVDFSKIRENRKQHKRDLSRASIGNEEELMA
Sbjct: 1   MEDRKEKVAPWMSVPQFGDWEQKGGVPDYSVDFSKIRENRKQHKRDLSRASIGNEEELMA 60

Query: 61  SSATPTTNTPHSHVDENHQLNPTNSNSPTTRKSILRYFNCCVKA 105
           SSATPTTNTPHSHVDENHQLNPTNSNSPTTRKSILRYFNCCVKA
Sbjct: 61  SSATPTTNTPHSHVDENHQLNPTNSNSPTTRKSILRYFNCCVKA 104

[Close]
BLAST of Cucsa.250380 vs. NCBI nr
Match: gi|659116098|ref|XP_008457901.1| (PREDICTED: uncharacterized protein LOC103497474 [Cucumis melo])

HSP 1 Score: 207.6 bits (527), Expect = 1.1e-50
Identity = 99/104 (95.19%), Postives = 100/104 (96.15%), Query Frame = 1 

Query: 1   MEDRKEKVAPWMSVPQFGDWEQKGGVPDYSVDFSKIRENRKQHKRDLSRASIGNEEELMA 60
           ME+RKEKVAPWMSVPQFGDWEQKG VPDYSVDFSKIRENRKQHKRDLSRASIGNEEELMA
Sbjct: 1   MEERKEKVAPWMSVPQFGDWEQKGEVPDYSVDFSKIRENRKQHKRDLSRASIGNEEELMA 60

Query: 61  SSATPTTNTPHSHVDENHQLNPTNSNSPTTRKSILRYFNCCVKA 105
           SS TPTTNTPHS VDEN QLNPTNSNSPTTRKSILRYFNCCVKA
Sbjct: 61  SSVTPTTNTPHSIVDENRQLNPTNSNSPTTRKSILRYFNCCVKA 104

[Close]
BLAST of Cucsa.250380 vs. NCBI nr
Match: gi|697096227|ref|XP_009615350.1| (PREDICTED: uncharacterized protein LOC104108076 [Nicotiana tomentosiformis])

HSP 1 Score: 149.8 bits (377), Expect = 2.6e-33
Identity = 71/104 (68.27%), Postives = 84/104 (80.77%), Query Frame = 1 

Query: 1   MEDRKEKVAPWMSVPQFGDWEQKGGVPDYSVDFSKIRENRKQHKRDLSRASIGNEEELMA 60
           M+DRKEK APW+SVPQFGDW+QKG +PDYS+DFSKIRENRKQ+KRDLSRAS+GNEEEL+ 
Sbjct: 1   MDDRKEKTAPWLSVPQFGDWDQKGVMPDYSMDFSKIRENRKQNKRDLSRASLGNEEELI- 60

Query: 61  SSATPTTNTPHSHVDENHQLNPTNSNSPTTRKSILRYFNCCVKA 105
           SS     NT H H   +  L+   ++SPTTR+SI  YFNCCVKA
Sbjct: 61  SSTNKNANTGHHHSAHSDDLHYHQNHSPTTRRSIFSYFNCCVKA 103

[Close]
BLAST of Cucsa.250380 vs. NCBI nr
Match: gi|951069079|ref|XP_014490030.1| (PREDICTED: uncharacterized protein LOC106752778 [Vigna radiata var. radiata])

HSP 1 Score: 149.1 bits (375), Expect = 4.5e-33
Identity = 73/104 (70.19%), Postives = 85/104 (81.73%), Query Frame = 1 

Query: 1   MEDRKEKVAPWMSVPQFGDWEQKGGVPDYSVDFSKIRENRKQHKRDLSRASIGNEEELMA 60
           ME  KEK APW+SVPQFGDW+QKG VPDYS+DFSKIRE RKQ+K ++SRAS+GNEEELMA
Sbjct: 1   MEQSKEKNAPWLSVPQFGDWDQKGQVPDYSLDFSKIREMRKQNKTNISRASLGNEEELMA 60

Query: 61  SSATPTTNTPHSHVDENHQLNPTNSNSPTTRKSILRYFNCCVKA 105
           SS T TTNT HS  DE+   +   ++SPTTR+S L YFNCCVKA
Sbjct: 61  SSTTNTTNTVHS--DEHQHPHYHQTSSPTTRRSFLSYFNCCVKA 102

[Close]
BLAST of Cucsa.250380 vs. NCBI nr
Match: gi|698567703|ref|XP_009773849.1| (PREDICTED: uncharacterized protein LOC104223999 isoform X3 [Nicotiana sylvestris])

HSP 1 Score: 147.5 bits (371), Expect = 1.3e-32
Identity = 70/104 (67.31%), Postives = 83/104 (79.81%), Query Frame = 1 

Query: 1   MEDRKEKVAPWMSVPQFGDWEQKGGVPDYSVDFSKIRENRKQHKRDLSRASIGNEEELMA 60
           M+DRKEK  PW+SVPQFGDW+QKG +PDYS+DFSKIRENRKQ+KRDLSRAS+GNEEEL+ 
Sbjct: 1   MDDRKEKTEPWLSVPQFGDWDQKGVMPDYSMDFSKIRENRKQNKRDLSRASLGNEEELI- 60

Query: 61  SSATPTTNTPHSHVDENHQLNPTNSNSPTTRKSILRYFNCCVKA 105
           SS     NT H H   +  L+   ++SPTTR+SI  YFNCCVKA
Sbjct: 61  SSTNKNANTGHHHSAHSDDLHFHQNHSPTTRRSIFSYFNCCVKA 103

The following BLAST results are available for this feature:
BLAST of Cucsa.250380 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LJN9_CUCSA6.4e-55100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_2G297140 PE=4 SV=1[more]
A0A0A0KJ83_CUCSA1.2e-3267.31Uncharacterized protein OS=Cucumis sativus GN=Csa_6G487580 PE=4 SV=1[more]
V7AZC3_PHAVU1.2e-3269.23Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_009G139200g PE=4 SV=1[more]
I1KBC1_SOYBN1.2e-3268.27Uncharacterized protein OS=Glycine max GN=GLYMA_06G146800 PE=4 SV=1[more]
A0A0B2PPG0_GLYSO1.2e-3268.27Uncharacterized protein OS=Glycine soja GN=glysoja_011827 PE=4 SV=1[more]
BLAST of Cucsa.250380 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G09960.12.1e-2856.36 FUNCTIONS IN: molecular_function unknown[more]
AT5G64850.11.9e-2654.39 FUNCTIONS IN: molecular_function unknown[more]
AT5G19473.13.4e-1538.83 RPM1-interacting protein 4 (RIN4) family protein[more]
BLAST of Cucsa.250380 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449461437|ref|XP_004148448.1|9.2e-55100.00PREDICTED: uncharacterized protein LOC101211284 [Cucumis sativus][more]
gi|659116098|ref|XP_008457901.1|1.1e-5095.19PREDICTED: uncharacterized protein LOC103497474 [Cucumis melo][more]
gi|697096227|ref|XP_009615350.1|2.6e-3368.27PREDICTED: uncharacterized protein LOC104108076 [Nicotiana tomentosiformis][more]
gi|951069079|ref|XP_014490030.1|4.5e-3370.19PREDICTED: uncharacterized protein LOC106752778 [Vigna radiata var. radiata][more]
gi|698567703|ref|XP_009773849.1|1.3e-3267.31PREDICTED: uncharacterized protein LOC104223999 isoform X3 [Nicotiana sylvestris... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.250380.1Cucsa.250380.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33882FAMILY NOT NAMEDcoord: 1..104
score: 7.1

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cucsa.250380Cla008500Watermelon (97103) v1cgywmB469
Cucsa.250380Csa2G297140Cucumber (Chinese Long) v2cgycuB358
Cucsa.250380Csa6G487580Cucumber (Chinese Long) v2cgycuB359
Cucsa.250380MELO3C007484Melon (DHL92) v3.5.1cgymeB425
Cucsa.250380MELO3C020960Melon (DHL92) v3.5.1cgymeB423
Cucsa.250380ClCG02G001020Watermelon (Charleston Gray)cgywcgB440
Cucsa.250380ClCG01G016140Watermelon (Charleston Gray)cgywcgB439
Cucsa.250380CSPI06G27280Wild cucumber (PI 183967)cgycpiB375
Cucsa.250380CSPI02G15140Wild cucumber (PI 183967)cgycpiB374
Cucsa.250380CmaCh02G005990Cucurbita maxima (Rimu)cgycmaB0697
Cucsa.250380CmaCh03G010400Cucurbita maxima (Rimu)cgycmaB0699
Cucsa.250380CmoCh03G010400Cucurbita moschata (Rifu)cgycmoB0699
Cucsa.250380CmoCh02G006020Cucurbita moschata (Rifu)cgycmoB0697
Cucsa.250380Lsi10G006670Bottle gourd (USVL1VR-Ls)cgylsiB409
Cucsa.250380Cp4.1LG05g10910Cucurbita pepo (Zucchini)cgycpeB0667
Cucsa.250380MELO3C020960.2Melon (DHL92) v3.6.1cgymedB417
Cucsa.250380MELO3C007484.2Melon (DHL92) v3.6.1cgymedB419
Cucsa.250380CsaV3_2G017680Cucumber (Chinese Long) v3cgycucB380
Cucsa.250380CsaV3_6G042410Cucumber (Chinese Long) v3cgycucB381
Cucsa.250380Cla97C01G015130Watermelon (97103) v2cgywmbB441
Cucsa.250380Cla97C02G027420Watermelon (97103) v2cgywmbB442
Cucsa.250380Bhi10G001876Wax gourdcgywgoB500
Cucsa.250380Carg11669Silver-seed gourdcarcgyB1174
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cucsa.250380Cucsa.101650Cucumber (Gy14) v1cgycgyB046
The following block(s) are covering this gene:
GeneOrganismBlock
Cucsa.250380Cucurbita maxima (Rimu)cgycmaB0696
Cucsa.250380Cucurbita moschata (Rifu)cgycmoB0696
Cucsa.250380Watermelon (97103) v1cgywmB470
Cucsa.250380Cucurbita pepo (Zucchini)cgycpeB0663
Cucsa.250380Cucurbita pepo (Zucchini)cgycpeB0665
Cucsa.250380Cucurbita pepo (Zucchini)cgycpeB0666