CmaCh07G007590 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh07G007590
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	RPM1-interacting protein 4 (RIN4) family protein
Location	Cma_Chr07 : 3364294 .. 3368175 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATAAAGACTCGACAGAGCCTTCATTTCCAATTTTAGTTTATTATTATTATTTTTTTTTTTATCGGAAGAAGAAGAATATATCAACTCTAGTGTCATTTCCCGGTGCTCCTCCTTTGCTTTTGCTCTTCGTTTTCATTCTCAATCCTCTCCGTAGAGTAAAGAAGAACTCGAACTTGAAAAGCTTCTTTTCGTCTGGTGTTCTTCGTCGTTCTGTGAAGTGAGGACTTGCTGCTGTTACCATGGATGATCGGAAGGAGGTCGTTTTTCTTTCTGTTTTGCTTTGCTGCTTGTGTGATTTCTCTTTTTCATGCTTATTGCTCTATTTTTGTTCATGTTTGTTTCTGCTAAGAAAATCTTAGGGTTTCGTTTTGATCGTTGCGTTATTTGCTTGCATAAGAGAGGAAATGCATAAATTTATTGATCTGAGTTGATTATTTCAGCGTGATTCTTGAAGAGGTTAGATTGTTGTTACTTTGGTTTTCAACCTCGCCTAAGGAAAACAAGCGTATAAGCATCAGAATCTCGTAATTAGTAGTATTCTTTTTGTTTGGTCAAACTGTGAATTGAGTTGAAATGTTGCTCTGTTATTTGTTTCTATTCAGCGTAGTCATCGCTGACATTTCATCTCGAACGTGCACATATATATATTTTTGTTTTCTTGTATGAAATTTTAGATTTGATTTTCCTTTTTTCTTCTATGTCAGCCTTTTTTCGGTTGAAATTTCTCACTTTGCTTATAAGATTCAGAAAATTAATTTGATTAGTTCGCTACCTTGGTTGGATTTTGACGTTTGTATTTTGTTACGAGAGAATTTGGCAGTATGCTTTTGCTTCTTAACCGTTTATGGTTAATTCGCGGAGGCAATCAAGTTACTTTTTCTAAGCTGGGAAACAGTCAAACCTGCCAACTTTTACTTCCATCCTCTCGACAATTATATTCCTATGGTTGCCAAACTTCAACGCTTTAGGCGATGAATTTTCTTCAGCTGCTCTTCTATTTCAACTATTGACTTTTTGTTTGTTTATTTATATTTTAGCATGTTTCGAAGACTAAAAAAATAAATTTTAGAAAAGTTGCTGTCCTGACTTTGAAATTTGAAAAACTTATCCAATTATTATACTCCACAGATAACGAACTTTAATTTGATTCATAAAAAAGTTGGGAGAAGGAATTTGTTGGCTCTAATAAGATACTAAATTGGCAACGGATAAAAGAAAATCCTAAAATGGTCAATTTCCGATATTCAGCTCATGTTATTTCGCGAATGCTAATGAGAGTCGAGAATGAATTGGACAATGAGAGGTTATTTTGCAAATATCTGATGTGGTGTGTGCTTTTGGTGAGAATAAATCTGTTACTTCTATAAAATAGAATAGCTGTAGAGTGTTTAATTGGTATTGTCTTTTTTTTTTTTAAAAAAAAAAAAGAATCTGAAATGTAACTGACATTCTTGGCTTCAACGAGATACGTTACTTTTGTTTTCTGCAGAAAACTGCTCCCTGGCTTTCAGTTCCACAGTTTGGAGATTGGGACCAGAAGGGACAGATGCCAGACTACTCTCTTGATTTCTCAAAAATTAGGGAAAATAGGAAACAAAACAAGAGAGACGTGTCCCGGGCGAGTCTTGGAAATGAAGAGGAGCTCATTGCCCCAGCCGCTCCCCCAACCACAACAGACTCTTTCCCCGCTGAAAACCATCACTCCTATCGTCAGAGTCAGCATCCTTCACCAGTAAGATTATTGCTCCTCCGACCTCAAATTTGATATTGGTAATTTTTTGATTGTCTGATAGTGACTTGCATGCTCTTATGCACATACCGTTTGGTCAACCGAAGAATCGGTTGGGTTGGGTTACATGTGTTGTCTGTGCCTGTGGGTCCATGCTGCCTGCTATTATCCATTAACTCGTGGGTACAGCTATTGATTGTGGAAAAATCAATATCAATATAAACCCAAAAGTTTCAAGGTCAAAAGACACTTTCCTGAAGTGTCATCTAATTTTATGATGAATAAGCTAATGAAAGTTTTATTTCCTTGGATATCAGATCTCCTACCTTAAATGTTGTAGATGAGGTAATTTTTCTGACACCTGTAGTTACATGTATATATTACGAATAAAGATCTGAGTGACTTAACAAACTTGCTACTTTGTATATTGTCTTATTGTTTGGATTATTTAGAAGGTTAGATTATTTTGGCGAAGTGAAACATGCTTCATGCCTGCTTCAGCTTTTGGGAAGAGAATTCTCATTTAGTCTTTGCTAATGTTAACAACGTTCGTAATGCCTTGTTTCAGGGTATAAAATTTAAACAAGAACAATAAAACCGATTGGTGATTGGAGAAAGATTGAAATAAATTGTTTAAGAAGCAGAATGCATTTGTCCATAATGTTAGTAGTCAGCTCAGTTGAAGGCGGAATTTTAGGTTATTCAGCATACATAAAGAACCAGTCACGGGCCGTGATTCTTGTTGATCGTTTAGATGTTATGTGGGTAGTGTGATTAGTGATATTGACTTCAAGTTAGGTTTGTGGAAACAAGTTGGGAGCGGGGTCCTCTATGCACCTAGCCCATTAGTAAGAATAAGTGGTGTGCATTCATCTGGTGTTTGTTGCCATATCTCTCATAGATTGAAGCTGGGATAGTAAATCCTATTTCATATTGAGGAACTTCCAAACAGGTTTTCTTTTCTTTCTTACATGGGGAAGAGATTTTCCTTACAAAGGACATATTCTAATTTATGTCAATGTCTAATGATTTTTATTCTTATTTTCTTCCAGTTTCAATTAAAGCTAAATAAAGGGTAGTTGAGTAATTAGTGTATGCGTTGTTTTATAGTGATAATTTCTGGACCACTCTTTGTATGTTTCATTGATGTGTATCTTTCATTATCCATATGTTTTTTTCTCTTCGCATTAAACAAAGAACAGTTGTCCACAGAATACGACATTAATTACTTTGTACAAACTAACTTCTAAATTTGGATAGATGAGATGCTGGTTGGCTTGCCTAATCATGTTTTGGATCGTAATTGGTTTAGCCATTTAGATATTTTTACCTAGTTAGAAGTATGCTTTTTTAAAACTTTATTTGTTTTCATATTTAGTCAAACTAGTGACTAACTCAGTTGATATTATAATGGCTTCAAAATTTAGCCCCTTTTTCGGTCTTCGGTAGTGGGTTGTTTCTCATATTATTGCAATGAATATGAAGCCATGAAGTTATGAAATCTGTGTCCCGGTATTTAGTTGAAAAAGCCTGGGCTAGTTCAGTGGAGTTGAAGTTGTATGAAGTTGTAAACTGAACGTCCGGCCCAAAACTGGGGAGCCAAACCTCTAGCTCGAGATTTGGGGTCTTACCCAAATCTCAACACGTGGGCTCAAACTTGTTTGAACTAGTGCACCCATCTTTTTTAATTTCATGTAGATATTACATCTTATCAAATTAACAGTGGGACCTAATTTTTATTATTATTATTATGTATGGTAAATTGTGTTCATTTTTTGATGATTTGTACAAATATTTTTGGTTGTTTTGCCAGCCAAGAAAGAGCATTCTAAGCTACTTCAACTGCTGCGTGAAAGCCTGAAATAGTCTTGAAGACCTTTGCAGCAGGCCCACTTGTAAGTTGAAATGTCATTGTACTAATTACTTCTGTACGGACACCTCTATCGTCCTTTATTTGTCTTGCTGCTTAGAAACTGTACAATTGTATTATATTTTTGGATTTCGTTCGATGCCTTTGTTCTTGCCTGTAGCTGCCTCTGTTTCATTAATTCTGCCTTGAATCAATCTGTTGAAAAACTTCGAGGAAATGTAAACAAATGCATTGGGTCTAGATGAACTTTGTTGGTACTACTTCATGAAAAATCTGCTGTAAC

mRNA sequence

ATAAAGACTCGACAGAGCCTTCATTTCCAATTTTAGTTTATTATTATTATTTTTTTTTTTATCGGAAGAAGAAGAATATATCAACTCTAGTGTCATTTCCCGGTGCTCCTCCTTTGCTTTTGCTCTTCGTTTTCATTCTCAATCCTCTCCGTAGAGTAAAGAAGAACTCGAACTTGAAAAGCTTCTTTTCGTCTGGTGTTCTTCGTCGTTCTGTGAAGTGAGGACTTGCTGCTGTTACCATGGATGATCGGAAGGAGAAAACTGCTCCCTGGCTTTCAGTTCCACAGTTTGGAGATTGGGACCAGAAGGGACAGATGCCAGACTACTCTCTTGATTTCTCAAAAATTAGGGAAAATAGGAAACAAAACAAGAGAGACGTGTCCCGGGCGAGTCTTGGAAATGAAGAGGAGCTCATTGCCCCAGCCGCTCCCCCAACCACAACAGACTCTTTCCCCGCTGAAAACCATCACTCCTATCGTCAGAGTCAGCATCCTTCACCACCAAGAAAGAGCATTCTAAGCTACTTCAACTGCTGCGTGAAAGCCTGAAATAGTCTTGAAGACCTTTGCAGCAGGCCCACTTGTAAGTTGAAATGTCATTGTACTAATTACTTCTGTACGGACACCTCTATCGTCCTTTATTTGTCTTGCTGCTTAGAAACTGTACAATTGTATTATATTTTTGGATTTCGTTCGATGCCTTTGTTCTTGCCTGTAGCTGCCTCTGTTTCATTAATTCTGCCTTGAATCAATCTGTTGAAAAACTTCGAGGAAATGTAAACAAATGCATTGGGTCTAGATGAACTTTGTTGGTACTACTTCATGAAAAATCTGCTGTAAC

Coding sequence (CDS)

ATGGATGATCGGAAGGAGAAAACTGCTCCCTGGCTTTCAGTTCCACAGTTTGGAGATTGGGACCAGAAGGGACAGATGCCAGACTACTCTCTTGATTTCTCAAAAATTAGGGAAAATAGGAAACAAAACAAGAGAGACGTGTCCCGGGCGAGTCTTGGAAATGAAGAGGAGCTCATTGCCCCAGCCGCTCCCCCAACCACAACAGACTCTTTCCCCGCTGAAAACCATCACTCCTATCGTCAGAGTCAGCATCCTTCACCACCAAGAAAGAGCATTCTAAGCTACTTCAACTGCTGCGTGAAAGCCTGA

Protein sequence

MDDRKEKTAPWLSVPQFGDWDQKGQMPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIAPAAPPTTTDSFPAENHHSYRQSQHPSPPRKSILSYFNCCVKA

Homology

[Close]

BLAST of CmaCh07G007590 vs. TrEMBL
Match: A0A0A0KJ83_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G487580 PE=4 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 7.6e-45
Identity = 88/102 (86.27%), Postives = 93/102 (91.18%), Query Frame = 1


Query: 1   MDDRKEKTAPWLSVPQFGDWDQKGQMPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIA 60
           MDDRKEKTAPWLSVPQFGDWDQKGQ+PDYSLDFSK+RENRKQNKRDVSRASLGNEEELIA
Sbjct: 1   MDDRKEKTAPWLSVPQFGDWDQKGQLPDYSLDFSKLRENRKQNKRDVSRASLGNEEELIA 60

Query: 61  PAAPPTTTDSFPAENHHSYRQSQHPSPPRKSILSYFNCCVKA 103
            AAPPTTTD+FP +NHH Y Q+ H  P RKSILS FNCCVKA
Sbjct: 61  KAAPPTTTDTFPTDNHHPYHQNHHSPPTRKSILSCFNCCVKA 102

[Close]

BLAST of CmaCh07G007590 vs. TrEMBL
Match: A0A0D2QFP8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_003G047500 PE=4 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 5.1e-33
Identity = 73/103 (70.87%), Postives = 83/103 (80.58%), Query Frame = 1


Query: 1   MDDRKEKTAPWLSVPQFGDWDQKGQMPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIA 60
           M+DRKEK APWLSVPQFGDWDQKGQ+PDYSLDFSKIRE RKQNKR+VSRASLGNEEE I 
Sbjct: 1   MEDRKEKNAPWLSVPQFGDWDQKGQVPDYSLDFSKIREMRKQNKREVSRASLGNEEEFIN 60

Query: 61  PAAPPTTTDSFPA-ENHHSYRQSQHPSPPRKSILSYFNCCVKA 103
           P A   T  + P+ ++HH+Y Q+ H    R+S  SYFNCCVKA
Sbjct: 61  PTA--NTVSTTPSDDHHHNYPQNHHSPSTRRSFFSYFNCCVKA 101

[Close]

BLAST of CmaCh07G007590 vs. TrEMBL
Match: A0A0B0P0J5_GOSAR (Secernin-2 OS=Gossypium arboreum GN=F383_07352 PE=4 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 5.1e-33
Identity = 73/103 (70.87%), Postives = 83/103 (80.58%), Query Frame = 1


Query: 1   MDDRKEKTAPWLSVPQFGDWDQKGQMPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIA 60
           M+DRKEK APWLSVPQFGDWDQKGQ+PDYSLDFSKIRE RKQNKR+VSRASLGNEEE I 
Sbjct: 1   MEDRKEKNAPWLSVPQFGDWDQKGQVPDYSLDFSKIREMRKQNKREVSRASLGNEEEFIN 60

Query: 61  PAAPPTTTDSFPA-ENHHSYRQSQHPSPPRKSILSYFNCCVKA 103
           P A   T  + P+ ++HH+Y Q+ H    R+S  SYFNCCVKA
Sbjct: 61  PTA--NTVSTTPSDDHHHNYPQNHHSPSTRRSFFSYFNCCVKA 101

[Close]

BLAST of CmaCh07G007590 vs. TrEMBL
Match: D7SW64_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0031g01630 PE=4 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 1.1e-32
Identity = 75/102 (73.53%), Postives = 82/102 (80.39%), Query Frame = 1


Query: 1   MDDRKEKTAPWLSVPQFGDWDQKGQMPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIA 60
           M+DRKEK APWLSVPQFGDWDQKGQ+PDYSLDFSKIRE RKQNKRDVSRASLGNEEEL+ 
Sbjct: 1   MEDRKEKAAPWLSVPQFGDWDQKGQVPDYSLDFSKIREMRKQNKRDVSRASLGNEEELV- 60

Query: 61  PAAPPTTTDSFPAENHHSYRQSQHPSPPRKSILSYFNCCVKA 103
             APPTT       +HH Y QS  P+  R+SIL  F+CCVKA
Sbjct: 61  --APPTTNADTRQTDHHHYHQSHSPT-GRRSILGCFSCCVKA 98

[Close]

BLAST of CmaCh07G007590 vs. TrEMBL
Match: V4S1P1_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10026820mg PE=4 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 2.0e-32
Identity = 74/105 (70.48%), Postives = 82/105 (78.10%), Query Frame = 1


Query: 1   MDDRKEKTAPWLSVPQFGDWDQKGQMPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIA 60
           M+DRKEK APWLSVPQFGDWDQKGQ+PDYSLDFSKIRE RKQNKRDVSRASLGNEE+ I 
Sbjct: 1   MEDRKEKNAPWLSVPQFGDWDQKGQVPDYSLDFSKIREMRKQNKRDVSRASLGNEEDFIN 60

Query: 61  PAAPPTTT--DSFPAENHHSYRQSQHPSP-PRKSILSYFNCCVKA 103
           P AP      ++   E HH ++   H SP  R+S LSYFNCCVKA
Sbjct: 61  PTAPSNNKAHNNQDDEQHHFHQSHHHHSPTTRRSFLSYFNCCVKA 105

[Close]

BLAST of CmaCh07G007590 vs. TAIR10
Match: AT5G09960.1 (AT5G09960.1 FUNCTIONS IN: molecular_function unknown)

HSP 1 Score: 127.9 bits (320), Expect = 3.6e-30
Identity = 69/110 (62.73%), Postives = 77/110 (70.00%), Query Frame = 1


Query: 2   DDRKEKTAPWLSVPQFGDWDQKG--QMPDYSLDFSKIRENRKQNKRDVSRASLGNEEELI 61
           DDRKEK  PWLSVPQFGDWDQKG   MPDYS+DF+KIRE RKQNKRD SRASLGNEEELI
Sbjct: 3   DDRKEKNTPWLSVPQFGDWDQKGGGTMPDYSMDFTKIREMRKQNKRDPSRASLGNEEELI 62

Query: 62  APAAPPTTT---DSFPAENHHSYRQSQHPSP----PRKSILSYFNCCVKA 103
            P    T+T    +  +EN   +  S H  P     R+S+ S FNCCVKA
Sbjct: 63  KPPESATSTAELTTVQSENQREFSPSHHHQPHSPSTRRSMFSCFNCCVKA 112

[Close]

BLAST of CmaCh07G007590 vs. TAIR10
Match: AT5G64850.1 (AT5G64850.1 FUNCTIONS IN: molecular_function unknown)

HSP 1 Score: 116.7 bits (291), Expect = 8.4e-27
Identity = 67/114 (58.77%), Postives = 73/114 (64.04%), Query Frame = 1


Query: 1   MDDRKE-KTAPWLSVPQFGDWDQKGQMPDYSLDFSKIRENRKQNKRDVSRASLGNEEELI 60
           M+DRKE K +PWLSVPQFGDWDQKG   DYS+DFSKIRE RK NKRD SRASLGNEEELI
Sbjct: 1   MEDRKENKNSPWLSVPQFGDWDQKGGSIDYSMDFSKIREMRKLNKRDASRASLGNEEELI 60

Query: 61  AP---------AAPPTTTDSFPAENHHSYRQSQHPSPP--RKSILSYFNCCVKA 103
            P         A P   T      N+ +     HP  P  R+ I S FNCCVKA
Sbjct: 61  NPFHDQPPVDTAKPKKLTTVHSDNNNRNEFSHHHPHSPSRRRRIFSCFNCCVKA 114

[Close]

BLAST of CmaCh07G007590 vs. TAIR10
Match: AT5G19473.1 (AT5G19473.1 RPM1-interacting protein 4 (RIN4) family protein)

HSP 1 Score: 79.0 bits (193), Expect = 1.9e-15
Identity = 42/101 (41.58%), Postives = 58/101 (57.43%), Query Frame = 1


Query: 3   DRKEKTAPWLSVPQFGDWDQKG--QMPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIA 62
           D++ + A W  VPQFG WDQKG     +YS+ FSK R NRKQNK  V  +SLG+E+EL+ 
Sbjct: 2   DKRRENAAWTPVPQFGGWDQKGPNDATNYSVVFSKARANRKQNKAGVRHSSLGSEQELMV 61

Query: 63  PAAPPTTTDSFPAENHHSYRQSQHPSPPRKSILSYFNCCVK 102
                +   +    +H    Q   P   +K IL+Y NCC++
Sbjct: 62  -----SVRRNHQQLHHRHETQDDDPVMKKKRILTYINCCIR 97

[Close]

BLAST of CmaCh07G007590 vs. NCBI nr
Match: gi|659079228|ref|XP_008440144.1| (PREDICTED: uncharacterized protein LOC103484698 isoform X2 [Cucumis melo])

HSP 1 Score: 188.3 bits (477), Expect = 6.4e-45
Identity = 91/103 (88.35%), Postives = 94/103 (91.26%), Query Frame = 1


Query: 1   MDDRKEKTAPWLSVPQFGDWDQKGQMPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIA 60
           MDDRKEKTAPWLSVPQFGDWDQKGQ+PDYSLDFSK+RENRKQNKRDVSRASLGNEEELIA
Sbjct: 1   MDDRKEKTAPWLSVPQFGDWDQKGQLPDYSLDFSKLRENRKQNKRDVSRASLGNEEELIA 60

Query: 61  PAAPPTTTDSFPAENHHSY-RQSQHPSPPRKSILSYFNCCVKA 103
            AAPPTTTDSFP +NHH Y  QS HP P RKSILS FNCCVKA
Sbjct: 61  KAAPPTTTDSFPTDNHHPYHHQSHHPPPTRKSILSCFNCCVKA 103

[Close]

BLAST of CmaCh07G007590 vs. NCBI nr
Match: gi|449448412|ref|XP_004141960.1| (PREDICTED: uncharacterized protein LOC101206523 [Cucumis sativus])

HSP 1 Score: 187.6 bits (475), Expect = 1.1e-44
Identity = 88/102 (86.27%), Postives = 93/102 (91.18%), Query Frame = 1


Query: 1   MDDRKEKTAPWLSVPQFGDWDQKGQMPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIA 60
           MDDRKEKTAPWLSVPQFGDWDQKGQ+PDYSLDFSK+RENRKQNKRDVSRASLGNEEELIA
Sbjct: 1   MDDRKEKTAPWLSVPQFGDWDQKGQLPDYSLDFSKLRENRKQNKRDVSRASLGNEEELIA 60

Query: 61  PAAPPTTTDSFPAENHHSYRQSQHPSPPRKSILSYFNCCVKA 103
            AAPPTTTD+FP +NHH Y Q+ H  P RKSILS FNCCVKA
Sbjct: 61  KAAPPTTTDTFPTDNHHPYHQNHHSPPTRKSILSCFNCCVKA 102

[Close]

BLAST of CmaCh07G007590 vs. NCBI nr
Match: gi|659079226|ref|XP_008440143.1| (PREDICTED: uncharacterized protein LOC103484698 isoform X1 [Cucumis melo])

HSP 1 Score: 178.7 bits (452), Expect = 5.1e-42
Identity = 86/99 (86.87%), Postives = 90/99 (90.91%), Query Frame = 1


Query: 5   KEKTAPWLSVPQFGDWDQKGQMPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIAPAAP 64
           +EKTAPWLSVPQFGDWDQKGQ+PDYSLDFSK+RENRKQNKRDVSRASLGNEEELIA AAP
Sbjct: 10  REKTAPWLSVPQFGDWDQKGQLPDYSLDFSKLRENRKQNKRDVSRASLGNEEELIAKAAP 69

Query: 65  PTTTDSFPAENHHSY-RQSQHPSPPRKSILSYFNCCVKA 103
           PTTTDSFP +NHH Y  QS HP P RKSILS FNCCVKA
Sbjct: 70  PTTTDSFPTDNHHPYHHQSHHPPPTRKSILSCFNCCVKA 108

[Close]

BLAST of CmaCh07G007590 vs. NCBI nr
Match: gi|823140118|ref|XP_012469921.1| (PREDICTED: uncharacterized protein LOC105787875 [Gossypium raimondii])

HSP 1 Score: 148.3 bits (373), Expect = 7.4e-33
Identity = 73/103 (70.87%), Postives = 83/103 (80.58%), Query Frame = 1


Query: 1   MDDRKEKTAPWLSVPQFGDWDQKGQMPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIA 60
           M+DRKEK APWLSVPQFGDWDQKGQ+PDYSLDFSKIRE RKQNKR+VSRASLGNEEE I 
Sbjct: 1   MEDRKEKNAPWLSVPQFGDWDQKGQVPDYSLDFSKIREMRKQNKREVSRASLGNEEEFIN 60

Query: 61  PAAPPTTTDSFPA-ENHHSYRQSQHPSPPRKSILSYFNCCVKA 103
           P A   T  + P+ ++HH+Y Q+ H    R+S  SYFNCCVKA
Sbjct: 61  PTA--NTVSTTPSDDHHHNYPQNHHSPSTRRSFFSYFNCCVKA 101

[Close]

BLAST of CmaCh07G007590 vs. NCBI nr
Match: gi|1009178596|ref|XP_015870615.1| (PREDICTED: uncharacterized protein LOC107407815 [Ziziphus jujuba])

HSP 1 Score: 148.3 bits (373), Expect = 7.4e-33
Identity = 75/103 (72.82%), Postives = 84/103 (81.55%), Query Frame = 1


Query: 1   MDDRKEKTAPWLSVPQFGDWDQKGQMPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIA 60
           M+DRKEK APWLSVPQFGDWDQKGQ+PDYSLDFSKIRE RKQNKRDVSRASLGNEEELI 
Sbjct: 51  MEDRKEKNAPWLSVPQFGDWDQKGQVPDYSLDFSKIREMRKQNKRDVSRASLGNEEELI- 110

Query: 61  PAAPPTTTDSFPAENHH-SYRQSQHPSPPRKSILSYFNCCVKA 103
            ++  TT +S    +HH  Y ++QH    R+SI SYFNCCVKA
Sbjct: 111 -SSNSTTANSTVHSDHHPDYHENQHSPSTRRSIFSYFNCCVKA 151

The following BLAST results are available for this feature:

BLAST of CmaCh07G007590 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmaCh07G007590 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KJ83_CUCSA	7.6e-45	86.27	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G487580 PE=4 SV=1	[more]
A0A0D2QFP8_GOSRA	5.1e-33	70.87	Uncharacterized protein OS=Gossypium raimondii GN=B456_003G047500 PE=4 SV=1	[more]
A0A0B0P0J5_GOSAR	5.1e-33	70.87	Secernin-2 OS=Gossypium arboreum GN=F383_07352 PE=4 SV=1	[more]
D7SW64_VITVI	1.1e-32	73.53	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0031g01630 PE=4 SV=...	[more]
V4S1P1_9ROSI	2.0e-32	70.48	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10026820mg PE=4 SV=1	[more]

BLAST of CmaCh07G007590 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G09960.1	3.6e-30	62.73	FUNCTIONS IN: molecular_function unknown	[more]
AT5G64850.1	8.4e-27	58.77	FUNCTIONS IN: molecular_function unknown	[more]
AT5G19473.1	1.9e-15	41.58	RPM1-interacting protein 4 (RIN4) family protein	[more]

BLAST of CmaCh07G007590 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659079228\|ref\|XP_008440144.1\|	6.4e-45	88.35	PREDICTED: uncharacterized protein LOC103484698 isoform X2 [Cucumis melo]	[more]
gi\|449448412\|ref\|XP_004141960.1\|	1.1e-44	86.27	PREDICTED: uncharacterized protein LOC101206523 [Cucumis sativus]	[more]
gi\|659079226\|ref\|XP_008440143.1\|	5.1e-42	86.87	PREDICTED: uncharacterized protein LOC103484698 isoform X1 [Cucumis melo]	[more]
gi\|823140118\|ref\|XP_012469921.1\|	7.4e-33	70.87	PREDICTED: uncharacterized protein LOC105787875 [Gossypium raimondii]	[more]
gi\|1009178596\|ref\|XP_015870615.1\|	7.4e-33	72.82	PREDICTED: uncharacterized protein LOC107407815 [Ziziphus jujuba]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh07G007590.1	CmaCh07G007590.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33882	FAMILY NOT NAMED	coord: 1..102 score: 1.9

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh07G007590	Cucsa.101650	Cucumber (Gy14) v1	cgycmaB0235
CmaCh07G007590	Cla008500	Watermelon (97103) v1	cmawmB824
CmaCh07G007590	Csa6G487580	Cucumber (Chinese Long) v2	cmacuB877
CmaCh07G007590	MELO3C007484	Melon (DHL92) v3.5.1	cmameB809
CmaCh07G007590	ClCG01G016140	Watermelon (Charleston Gray)	cmawcgB754
CmaCh07G007590	CSPI06G27280	Wild cucumber (PI 183967)	cmacpiB893
CmaCh07G007590	CmoCh07G007800	Cucurbita moschata (Rifu)	cmacmoB875
CmaCh07G007590	CmoCh03G010400	Cucurbita moschata (Rifu)	cmacmoB858
CmaCh07G007590	Lsi01G010600	Bottle gourd (USVL1VR-Ls)	cmalsiB786
CmaCh07G007590	Cp4.1LG19g11780	Cucurbita pepo (Zucchini)	cmacpeB880
CmaCh07G007590	MELO3C007484.2	Melon (DHL92) v3.6.1	cmamedB907
CmaCh07G007590	CsaV3_6G042410	Cucumber (Chinese Long) v3	cmacucB1035
CmaCh07G007590	Cla97C01G015130	Watermelon (97103) v2	cmawmbB875
CmaCh07G007590	Bhi03G001537	Wax gourd	cmawgoB1060
CmaCh07G007590	CsGy6G026660	Cucumber (Gy14) v2	cgybcmaB861
CmaCh07G007590	Carg05267	Silver-seed gourd	carcmaB1130
CmaCh07G007590	Carg00897	Silver-seed gourd	carcmaB0571

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh07G007590	CmaCh03G010400	Cucurbita maxima (Rimu)	cmacmaB523

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh07G007590	Cucumber (Gy14) v1	cgycmaB1022
CmaCh07G007590	Cucurbita pepo (Zucchini)	cmacpeB866