Cla97C01G010030 (gene) Watermelon (97103) v2

Overview
NameCla97C01G010030
Typegene
OrganismCitrullus lanatus (Watermelon (97103) v2)
DescriptionRPM1-interacting protein 4-like
LocationCla97Chr01 : 13680192 .. 13681940 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAGTGAGTGTTTTTTTTTTTTTTTTTTTCCTTGTCTTTTTTTCATCAGCACAATTACCATCTCAAATTAAATCATATTAATTACTAATAGAAGAATGAAATTTGTATTAATAATCTTCAATTAATCAATCTAATGGGCAGGGGGTAAAATCGTCATCTCACGTTCCGAAATTCGGCAATTGGGACTCCGATGACGTACCGTACACCATCTGTTTCGAAAACGCCCGTGAACTCCGAGCCACCGGCATCACCTTCGATCCCAACGATCCCGACACCTACCCGCCGGCCGCCGTCGTAAACCAGAAATCAATCCCAGCCGACAACCGCCGTCATCACGACGGCAGGGACTACCACCAGCGGCGAGCGATCGGAAACTCCGGATCGGAGAAATTGAGCAGTGAGAGAAGCGGTTCGGATTACGCGCTTCTGAAAGAGGCGAAGCAGAGTGGAAGGAAGAAGAAAAATAGTAATGGAGCGGAAGGAATGAGTAGATTTACTCCGACGACGACGGTGGGCGGAAAGGGTAATCGGAACCCTAGGGTTCGGCGGAATAATGAAGGGGAAATGATGGCGTCGGTGCCGAAATTTGGGAGCTGGGATGTGAGGGATCCGAAATCGGGAGATGGTTATACGGCGATTTTCAATAAAGTGAAGACTGAGAAGCAAATTGGAGGTTCTAAGAGTCCTCAGGCCGTTCCGCCATTGATGAATCAAACCAAGCAACCAATTGCTAAAACTACTACTGCTACTAATACTCGTGGACCCACTTCATTTGCTTTCAAGGTAATTTTACATTTCTAATCATTTAATCGAACGTTGTGTTTAAAATTCATTAACAACCATTTAAAATAGTTTCTAAGGTGTATTTTAAACTATTTTTATTCAAAAAAAAAAAGTTTAAATAAAAATAAATTTTTTTTTAAAAAACATTATTTTTCTCAATTCAATTTAAACGGGCCCCTTGAAGTTGATGGTAAAGACTTCTGAATGATTTATCTTGATTATTTGGCATTAGTTTCTAATTAATGAAAAATTAAACTTATAAAAATTACTTTCATTTATCTATGAGTTTCATTGTTTTGATATCATATTTTACTATTGGTTTGAAACAACCAAACCAAAATTTTAAAACTAAAAGAAAATTAAAAGAGATGTTTTGCAAATATAAGAAAATAACATTGTCTGTTAGTGATAAATACTAAAAGACATCTATCAATGTCTATAACTGATAGACTATAACTAATAGATGATAATAGTCTATTAGTAGACAGTAACATTTTGTTATGTTTGAAAATATTTTCAGCAGTTTTGTCATTTATAATAATTACTTAAAATAAAAACTAAAAGTTAAATAATTACCAAATAGAGTTTAATTTTAACCTAACAATTTAGGTCATGACAAATTTAACAAGATAACAAGATTCTTTGAACATTGGAATTAAAATGATAAATAGTAACAACATCACAAATTTAAACTTTTTAGATTGCTTTTTTATTTTTAACCACTTAATAAGTAAAATCAAAGCATACTTTAAAACTTATATTTGAAAGTGCCCTTTTCATGTCAATCCATCAATGTTTTTATTTATAAAATTTAGTAAATTATATAAACAAGTTTAACTTTTAAAATGATAGAAAATAAATTTTAATTTTTTTTTCCTATGAACTAAATATAATTATTTAAAAAATAGTAAAGAATTTGTCCGTTTATTTATGCAGATATGTTGCTGTTTATGTCCAAAGTGA

mRNA sequence

ATGGCAGGGGTAAAATCGTCATCTCACGTTCCGAAATTCGGCAATTGGGACTCCGATGACGTACCGTACACCATCTGTTTCGAAAACGCCCGTGAACTCCGAGCCACCGGCATCACCTTCGATCCCAACGATCCCGACACCTACCCGCCGGCCGCCGTCGTAAACCAGAAATCAATCCCAGCCGACAACCGCCGTCATCACGACGGCAGGGACTACCACCAGCGGCGAGCGATCGGAAACTCCGGATCGGAGAAATTGAGCAGTGAGAGAAGCGGTTCGGATTACGCGCTTCTGAAAGAGGCGAAGCAGAGTGGAAGGAAGAAGAAAAATAGTAATGGAGCGGAAGGAATGAGTAGATTTACTCCGACGACGACGGTGGGCGGAAAGGGTAATCGGAACCCTAGGGTTCGGCGGAATAATGAAGGGGAAATGATGGCGTCGGTGCCGAAATTTGGGAGCTGGGATGTGAGGGATCCGAAATCGGGAGATGGTTATACGGCGATTTTCAATAAAGTGAAGACTGAGAAGCAAATTGGAGGTTCTAAGAGTCCTCAGGCCGTTCCGCCATTGATGAATCAAACCAAGCAACCAATTGCTAAAACTACTACTGCTACTAATACTCGTGGACCCACTTCATTTGCTTTCAAGATATGTTGCTGTTTATGTCCAAAGTGA

Coding sequence (CDS)

ATGGCAGGGGTAAAATCGTCATCTCACGTTCCGAAATTCGGCAATTGGGACTCCGATGACGTACCGTACACCATCTGTTTCGAAAACGCCCGTGAACTCCGAGCCACCGGCATCACCTTCGATCCCAACGATCCCGACACCTACCCGCCGGCCGCCGTCGTAAACCAGAAATCAATCCCAGCCGACAACCGCCGTCATCACGACGGCAGGGACTACCACCAGCGGCGAGCGATCGGAAACTCCGGATCGGAGAAATTGAGCAGTGAGAGAAGCGGTTCGGATTACGCGCTTCTGAAAGAGGCGAAGCAGAGTGGAAGGAAGAAGAAAAATAGTAATGGAGCGGAAGGAATGAGTAGATTTACTCCGACGACGACGGTGGGCGGAAAGGGTAATCGGAACCCTAGGGTTCGGCGGAATAATGAAGGGGAAATGATGGCGTCGGTGCCGAAATTTGGGAGCTGGGATGTGAGGGATCCGAAATCGGGAGATGGTTATACGGCGATTTTCAATAAAGTGAAGACTGAGAAGCAAATTGGAGGTTCTAAGAGTCCTCAGGCCGTTCCGCCATTGATGAATCAAACCAAGCAACCAATTGCTAAAACTACTACTGCTACTAATACTCGTGGACCCACTTCATTTGCTTTCAAGATATGTTGCTGTTTATGTCCAAAGTGA

Protein sequence

MAGVKSSSHVPKFGNWDSDDVPYTICFENARELRATGITFDPNDPDTYPPAAVVNQKSIPADNRRHHDGRDYHQRRAIGNSGSEKLSSERSGSDYALLKEAKQSGRKKKNSNGAEGMSRFTPTTTVGGKGNRNPRVRRNNEGEMMASVPKFGSWDVRDPKSGDGYTAIFNKVKTEKQIGGSKSPQAVPPLMNQTKQPIAKTTTATNTRGPTSFAFKICCCLCPK
Homology
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BLAST of Cla97C01G010030 vs. NCBI nr
Match: XP_008458983.1 (PREDICTED: RPM1-interacting protein 4-like [Cucumis melo])

HSP 1 Score: 370.9 bits (951), Expect = 3.0e-99
Identity = 189/224 (84.38%), Postives = 198/224 (88.39%), Query Frame = 0 

Query: 1   MAGVKSSSHVPKFGNWDSDDVPYTICFENARELRATGITFDPNDPDTYPPAAVVNQKSIP 60
           MAG KSSSHVPKFGNWDSDDVPYTI FENAREL+A G+TFDPNDPDTYPPA   NQ SIP
Sbjct: 1   MAGTKSSSHVPKFGNWDSDDVPYTIFFENARELQAAGVTFDPNDPDTYPPAVFANQNSIP 60

Query: 61  ADNRRHHDGRDYHQRRAIGNSGSEKLSSERSGSDYALLKEAKQSGRKKKNSNGAEGMSRF 120
           AD+ RHHDG D HQRR I NSGSEKLSSERS SDYALLK AKQSGRKKKNSNGAEGMSRF
Sbjct: 61  ADHHRHHDGEDSHQRREIVNSGSEKLSSERSDSDYALLK-AKQSGRKKKNSNGAEGMSRF 120

Query: 121 TPTTTVGGKGNRNPRVRRNNEGEMMASVPKFGSWDVRDPKSGDGYTAIFNKVKTEKQIGG 180
           +P TTV GKGNRNPRVRRNNEGEMMASVPKFGSWDVRDPKSGDGYTAIFNKVK EKQIGG
Sbjct: 121 SP-TTVDGKGNRNPRVRRNNEGEMMASVPKFGSWDVRDPKSGDGYTAIFNKVKIEKQIGG 180

Query: 181 SKSPQAVPPLMNQTKQPIAKTTTA-TNTRGPTSFAFKICCCLCP 224
           S +PQ VPPLMNQTKQP+ +TT A T+T+G TSF  KICCCL P
Sbjct: 181 SNNPQTVPPLMNQTKQPMTQTTVAKTSTQGSTSFVSKICCCLGP 222

[Close]
BLAST of Cla97C01G010030 vs. NCBI nr
Match: XP_011660296.1 (PREDICTED: RPM1-interacting protein 4-like [Cucumis sativus] >KGN66824.1 hypothetical protein Csa_1G699040 [Cucumis sativus])

HSP 1 Score: 355.5 bits (911), Expect = 1.3e-94
Identity = 183/225 (81.33%), Postives = 194/225 (86.22%), Query Frame = 0 

Query: 1   MAGVKSSSHVPKFGNWDSDDVPYTICFENARELRATGITFDPNDPDTYPPAAVVNQKSIP 60
           MAG KSSSHVPKFGNWDSDDVPYTI FENAREL+A GITFDPNDPDTYPP AV NQ S P
Sbjct: 1   MAGPKSSSHVPKFGNWDSDDVPYTIYFENARELQAAGITFDPNDPDTYPPTAVANQNSSP 60

Query: 61  ADNRRHHDGRDYHQRRAIGNSGSEKLSSERSGSDYALLKEAKQSGRKKKNSNGAEGMSRF 120
           A++ R+HDG D HQRR I NSGSEKLSSERS SDYALLK AKQSGRKKKNSNGAEGMSRF
Sbjct: 61  ANHHRYHDGDDSHQRREIVNSGSEKLSSERSDSDYALLK-AKQSGRKKKNSNGAEGMSRF 120

Query: 121 TPTTTVGGKGNRNPRVRRNNEGEMMASVPKFGSWDVRDPKSGDGYTAIFNKVKTEKQIGG 180
           +P  TV GKGNRNPRVRRNNEGEMMASVPKFGSWDVRDPKSGDGYTAIFNKVK EKQ+GG
Sbjct: 121 SP-ATVDGKGNRNPRVRRNNEGEMMASVPKFGSWDVRDPKSGDGYTAIFNKVKIEKQVGG 180

Query: 181 SKSPQAVPPLMNQTKQPIAKTTTA-TNTRGPTSFAFKICCCLCPK 225
           S   Q+VP LMNQTKQPI +TT   +++ G TSF  KICCCL PK
Sbjct: 181 SNDTQSVPALMNQTKQPITQTTVGKSSSHGSTSFGSKICCCLYPK 223

[Close]
BLAST of Cla97C01G010030 vs. NCBI nr
Match: XP_022955116.1 (RPM1-interacting protein 4-like [Cucurbita moschata])

HSP 1 Score: 250.0 bits (637), Expect = 7.7e-63
Identity = 143/224 (63.84%), Postives = 157/224 (70.09%), Query Frame = 0 

Query: 1   MAGVKSSSHVPKFGNWDSDDVPYTICFENARELRATGITFDPNDPDTYPPAAVVNQKSIP 60
           MAG KSS HVPKFGNWD+DDVPYTICFENARELRA GITFDPNDPDTYPP          
Sbjct: 1   MAGAKSSFHVPKFGNWDTDDVPYTICFENARELRAAGITFDPNDPDTYPPEVFKPVAHDG 60

Query: 61  ADNRRHHDGRDYHQRRAIGNSGSEKLSSERSGSDYALLKEAKQSGRKKKNSNGAEGMSRF 120
            +++R    +   +R AI NSGSEKLSSERSGSDYALLK++K+        NG EG+SR 
Sbjct: 61  GEHQRRPRQQPNRERGAIINSGSEKLSSERSGSDYALLKKSKE--------NGVEGISRL 120

Query: 121 TPTTTVGGKGNRNPRVRRNNEGEMMASVPKFGSWDVRDPKSGDGYTAIFNKVKTEKQIGG 180
            P   V G G  NP           ASVPKFGSWD RDPKSGDGYTAIFNK+K EKQI  
Sbjct: 121 AP--AVAGHGG-NP-----------ASVPKFGSWDARDPKSGDGYTAIFNKMKIEKQIAA 180

Query: 181 SKSPQAVPPLMNQTKQPIAKTTTATNTRGPTSFAFKICCCLCPK 225
           S +PQ+VPPLMN+TKQPIA T T   T G TSFA KICCCL  K
Sbjct: 181 S-NPQSVPPLMNKTKQPIAHTNT---TSGFTSFASKICCCLRTK 198

[Close]
BLAST of Cla97C01G010030 vs. NCBI nr
Match: XP_022994302.1 (RPM1-interacting protein 4-like [Cucurbita maxima])

HSP 1 Score: 248.1 bits (632), Expect = 2.9e-62
Identity = 141/224 (62.95%), Postives = 158/224 (70.54%), Query Frame = 0 

Query: 1   MAGVKSSSHVPKFGNWDSDDVPYTICFENARELRATGITFDPNDPDTYPPAAVVNQKSIP 60
           MAG  SS HVPKFGNWD+DDVPYTICFENARELRA GITFDPNDPDTYPP          
Sbjct: 1   MAGANSSIHVPKFGNWDTDDVPYTICFENARELRAAGITFDPNDPDTYPPEVFKPAAHNG 60

Query: 61  ADNRRHHDGRDYHQRRAIGNSGSEKLSSERSGSDYALLKEAKQSGRKKKNSNGAEGMSRF 120
            +++R    +   +R AI NSGSEKLSSERSGS+YALLK++K+        NG EG+SR 
Sbjct: 61  GEHQRRPRQQPNRERGAIMNSGSEKLSSERSGSNYALLKKSKE--------NGVEGISRL 120

Query: 121 TPTTTVGGKGNRNPRVRRNNEGEMMASVPKFGSWDVRDPKSGDGYTAIFNKVKTEKQIGG 180
            P   V G G  NP+        + ASVPKFGSWD +DPKSGDGYTAIFNK+K EKQI  
Sbjct: 121 AP--AVAGHG-VNPK-------PVTASVPKFGSWDAKDPKSGDGYTAIFNKMKIEKQIAA 180

Query: 181 SKSPQAVPPLMNQTKQPIAKTTTATNTRGPTSFAFKICCCLCPK 225
           S +PQAVPPLMN+TKQPIA T T   T G TSFA KICCCL  K
Sbjct: 181 S-NPQAVPPLMNKTKQPIAHTNT---TSGFTSFASKICCCLRAK 202

[Close]
BLAST of Cla97C01G010030 vs. NCBI nr
Match: XP_023525812.1 (RPM1-interacting protein 4-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 246.1 bits (627), Expect = 1.1e-61
Identity = 141/224 (62.95%), Postives = 155/224 (69.20%), Query Frame = 0 

Query: 1   MAGVKSSSHVPKFGNWDSDDVPYTICFENARELRATGITFDPNDPDTYPPAAVVNQKSIP 60
           MAG  SS HVPKFGNWD+DDVPYTICFENARELRA GI FDPNDPDTYPP          
Sbjct: 1   MAGANSSFHVPKFGNWDTDDVPYTICFENARELRAAGINFDPNDPDTYPPEVFKPAAHDG 60

Query: 61  ADNRRHHDGRDYHQRRAIGNSGSEKLSSERSGSDYALLKEAKQSGRKKKNSNGAEGMSRF 120
            +++R    +   +R AI NSGSEKLSSERSGSDYALLK++K+        NG EG+SR 
Sbjct: 61  GEHQRRPRQQPNRERGAIINSGSEKLSSERSGSDYALLKKSKE--------NGVEGISRL 120

Query: 121 TPTTTVGGKGNRNPRVRRNNEGEMMASVPKFGSWDVRDPKSGDGYTAIFNKVKTEKQIGG 180
            P   V G G  NP           ASVPKFGSWD RDPKSGDGYTAIFNK+K EKQI  
Sbjct: 121 AP--AVAGHGG-NP-----------ASVPKFGSWDARDPKSGDGYTAIFNKMKIEKQIAA 180

Query: 181 SKSPQAVPPLMNQTKQPIAKTTTATNTRGPTSFAFKICCCLCPK 225
           S +PQAVPPLMN++KQPIA T T   T G TSFA KICCCL  K
Sbjct: 181 S-NPQAVPPLMNKSKQPIAHTNT---TSGFTSFASKICCCLRTK 198

[Close]
BLAST of Cla97C01G010030 vs. TrEMBL
Match: tr|A0A1S3C9P5|A0A1S3C9P5_CUCME (RPM1-interacting protein 4-like OS=Cucumis melo OX=3656 GN=LOC103498234 PE=4 SV=1)

HSP 1 Score: 370.9 bits (951), Expect = 2.0e-99
Identity = 189/224 (84.38%), Postives = 198/224 (88.39%), Query Frame = 0 

Query: 1   MAGVKSSSHVPKFGNWDSDDVPYTICFENARELRATGITFDPNDPDTYPPAAVVNQKSIP 60
           MAG KSSSHVPKFGNWDSDDVPYTI FENAREL+A G+TFDPNDPDTYPPA   NQ SIP
Sbjct: 1   MAGTKSSSHVPKFGNWDSDDVPYTIFFENARELQAAGVTFDPNDPDTYPPAVFANQNSIP 60

Query: 61  ADNRRHHDGRDYHQRRAIGNSGSEKLSSERSGSDYALLKEAKQSGRKKKNSNGAEGMSRF 120
           AD+ RHHDG D HQRR I NSGSEKLSSERS SDYALLK AKQSGRKKKNSNGAEGMSRF
Sbjct: 61  ADHHRHHDGEDSHQRREIVNSGSEKLSSERSDSDYALLK-AKQSGRKKKNSNGAEGMSRF 120

Query: 121 TPTTTVGGKGNRNPRVRRNNEGEMMASVPKFGSWDVRDPKSGDGYTAIFNKVKTEKQIGG 180
           +P TTV GKGNRNPRVRRNNEGEMMASVPKFGSWDVRDPKSGDGYTAIFNKVK EKQIGG
Sbjct: 121 SP-TTVDGKGNRNPRVRRNNEGEMMASVPKFGSWDVRDPKSGDGYTAIFNKVKIEKQIGG 180

Query: 181 SKSPQAVPPLMNQTKQPIAKTTTA-TNTRGPTSFAFKICCCLCP 224
           S +PQ VPPLMNQTKQP+ +TT A T+T+G TSF  KICCCL P
Sbjct: 181 SNNPQTVPPLMNQTKQPMTQTTVAKTSTQGSTSFVSKICCCLGP 222

[Close]
BLAST of Cla97C01G010030 vs. TrEMBL
Match: tr|A0A0A0M0M0|A0A0A0M0M0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G699040 PE=4 SV=1)

HSP 1 Score: 355.5 bits (911), Expect = 8.6e-95
Identity = 183/225 (81.33%), Postives = 194/225 (86.22%), Query Frame = 0 

Query: 1   MAGVKSSSHVPKFGNWDSDDVPYTICFENARELRATGITFDPNDPDTYPPAAVVNQKSIP 60
           MAG KSSSHVPKFGNWDSDDVPYTI FENAREL+A GITFDPNDPDTYPP AV NQ S P
Sbjct: 1   MAGPKSSSHVPKFGNWDSDDVPYTIYFENARELQAAGITFDPNDPDTYPPTAVANQNSSP 60

Query: 61  ADNRRHHDGRDYHQRRAIGNSGSEKLSSERSGSDYALLKEAKQSGRKKKNSNGAEGMSRF 120
           A++ R+HDG D HQRR I NSGSEKLSSERS SDYALLK AKQSGRKKKNSNGAEGMSRF
Sbjct: 61  ANHHRYHDGDDSHQRREIVNSGSEKLSSERSDSDYALLK-AKQSGRKKKNSNGAEGMSRF 120

Query: 121 TPTTTVGGKGNRNPRVRRNNEGEMMASVPKFGSWDVRDPKSGDGYTAIFNKVKTEKQIGG 180
           +P  TV GKGNRNPRVRRNNEGEMMASVPKFGSWDVRDPKSGDGYTAIFNKVK EKQ+GG
Sbjct: 121 SP-ATVDGKGNRNPRVRRNNEGEMMASVPKFGSWDVRDPKSGDGYTAIFNKVKIEKQVGG 180

Query: 181 SKSPQAVPPLMNQTKQPIAKTTTA-TNTRGPTSFAFKICCCLCPK 225
           S   Q+VP LMNQTKQPI +TT   +++ G TSF  KICCCL PK
Sbjct: 181 SNDTQSVPALMNQTKQPITQTTVGKSSSHGSTSFGSKICCCLYPK 223

[Close]
BLAST of Cla97C01G010030 vs. TrEMBL
Match: tr|A0A061GGZ7|A0A061GGZ7_THECC (RPM1 interacting protein 4, putative OS=Theobroma cacao OX=3641 GN=TCM_030331 PE=4 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 8.2e-29
Identity = 101/259 (39.00%), Postives = 133/259 (51.35%), Query Frame = 0 

Query: 1   MAGVKSSSHVPKFGNWDSDDVPYTICFENARELRATGITFDPNDPDTYP----------- 60
           M+ V+  SHVPKFG+WD+D++PYT  FENAR+ RA GI  +PNDP+  P           
Sbjct: 68  MSHVQLRSHVPKFGDWDNDNLPYTAYFENARKERA-GIRMNPNDPEENPEAFMYTGGGLE 127

Query: 61  ----------PAAVVNQKSIPADNRRHHDGR------------DYHQRRAIGNSGSEKLS 120
                     P A  +QKSIPAD + H+DG             DY +      S + +  
Sbjct: 128 SNCDCQPVQVPPAAGSQKSIPAD-KNHNDGHSRQNAPNRNGSYDYQKSVRSHRSMASESG 187

Query: 121 SERSGSDYALLK---EAKQSGRKKKNSNGAEGMSRFTPTTTVGGKGNRNPRVR--RNNEG 180
           SE+S SD++LL+       SG+KK    G  G S F+ + + G   +RN   +   N + 
Sbjct: 188 SEKSNSDHSLLRFSHRRANSGQKK----GRVGGSSFSSSVS-GQFTHRNGSYQSDNNRQH 247

Query: 181 EMMASVPKFGSWDVRDPKSGDGYTAIFNKVKTEKQIGGSKSPQAVPPLMNQTKQPIAKTT 222
              AS+PKFG WD  DP SG+GYTAIFN+VK EKQ   SK P   P   N +    +K  
Sbjct: 248 RRTASIPKFGEWDETDPTSGEGYTAIFNQVKAEKQSPTSKFPTVPPQQSNYSDCYHSKPR 307

[Close]
BLAST of Cla97C01G010030 vs. TrEMBL
Match: tr|A0A0B0Q117|A0A0B0Q117_GOSAR (RPM1-interacting 4-like protein OS=Gossypium arboreum OX=29729 GN=F383_15209 PE=4 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 2.1e-24
Identity = 90/235 (38.30%), Postives = 121/235 (51.49%), Query Frame = 0 

Query: 8   SHVPKFGNWDSDDVPYTICFENARELRATGITFDPNDPDTYP---------PAAVVNQKS 67
           SHVPKFG+WD+ D+PYT  FENAR+ +A GI  +PNDP+  P         P +  + +S
Sbjct: 9   SHVPKFGDWDNGDLPYTTYFENARKEKA-GIRMNPNDPEENPEAFMYTRGGPESNYDGRS 68

Query: 68  IPADNRRHH------DGRDY-HQRRAIGNSGSEKLSSERSGSDYALLKEAKQSGRKKKNS 127
           +P    +HH      DG  Y HQ+ A     +   S   +GSD ++L     S  +++NS
Sbjct: 69  VPVTADKHHRNAANKDGSSYDHQKSARRQRDTALESENNTGSDRSIL----HSSHRRRNS 128

Query: 128 ---NGAEGMSRFTPTTTVGGKGNRNPRVRRN-NEGEMMASVPKFGSWDVRDPKSGDGYTA 187
              N   G S F  + +V G+  RN   + + N+    ASVPKFG WD  DP SG+G+T 
Sbjct: 129 GQKNSRPGGSAF--SASVSGQSQRNGNHQLDGNKHHRTASVPKFGEWDETDPTSGEGFTV 188

Query: 188 IFNKVKTEKQIGGSKSPQAVPPLMN-QTKQPIAKTTTATNTRGPTSFAFKICCCL 222
           IFN++K EKQ          PP  N QT  P  KT   +          KICCCL
Sbjct: 189 IFNQLKEEKQ---------APPSSNYQTVAPKVKTMNYSK--------LKICCCL 219

[Close]
BLAST of Cla97C01G010030 vs. TrEMBL
Match: tr|A0A1U8JYC5|A0A1U8JYC5_GOSHI (RPM1-interacting protein 4-like OS=Gossypium hirsutum OX=3635 GN=LOC107910066 PE=4 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 2.1e-24
Identity = 91/241 (37.76%), Postives = 124/241 (51.45%), Query Frame = 0 

Query: 1   MAGVKSSSHVPKFGNWDSDDVPYTICFENARELRATGITFDPNDPDTYPPAAVVNQ---- 60
           M+  K  SHVPKFG+WD+ D+PYT  FENAR+ +A GI  +PNDP+  P A +  +    
Sbjct: 1   MSEAKLRSHVPKFGDWDNGDLPYTTYFENARKEKA-GIRMNPNDPEENPEALMYTRGGPE 60

Query: 61  -----KSIPADNRRHH------DGRDY-HQRRAIGNSGSEKLSSERSGSDYALLKEAKQS 120
                +S+PA   +HH      DG  Y HQ+ A     +   S   +GSD ++L     S
Sbjct: 61  SNYDGRSVPATADKHHQNAANKDGSSYDHQKSARRQRNTALESENNTGSDRSIL----HS 120

Query: 121 GRKKKNS---NGAEGMSRFTPTTTVGGKGNRNPRVRRN-NEGEMMASVPKFGSWDVRDPK 180
             +++NS   NG  G S F  + +V G+  R    + + N+G   ASVPKFG WD  DP 
Sbjct: 121 NHRRRNSGQKNGRPGGSAF--SASVSGQSQRTGNHQLDGNKG--TASVPKFGEWDETDPT 180

Query: 181 SGDGYTAIFNKVKTEKQIGGSKSPQAVPPLMNQTKQPIAKTTTATNTRGPTSFAFKICCC 222
           SG+G+T IFN++K +         QA P    QT  P  KT   +          KICCC
Sbjct: 181 SGEGFTVIFNRLKEK---------QAAPSSNYQTVAPEVKTMNYSK--------LKICCC 215

[Close]
BLAST of Cla97C01G010030 vs. Swiss-Prot
Match: sp|Q8GYN5|RIN4_ARATH (RPM1-interacting protein 4 OS=Arabidopsis thaliana OX=3702 GN=RIN4 PE=1 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 3.3e-17
Identity = 65/207 (31.40%), Postives = 98/207 (47.34%), Query Frame = 0 

Query: 8   SHVPKFGNWDSDD-VPYTICFENARELRATGI-TFDPNDPD----------TYPPAAVVN 67
           S+VPKFGNW++++ VPYT  F+ AR+ RA G    +PNDP+           +PP++   
Sbjct: 4   SNVPKFGNWEAEENVPYTAYFDKARKTRAPGSKIMNPNDPEYNSDSQSQAPPHPPSSRTK 63

Query: 68  QKSIPA--DNRRHHDGRDYHQRRAIGNSGSEKLSSERSGSDYALLKEAKQSGRKK---KN 127
            + +     +R H   R+  + +  G++G    S+E +        +      K    KN
Sbjct: 64  PEQVDTVRRSREHMRSREESELKQFGDAGGS--SNEAANKRQGRASQNNSYDNKSPLHKN 123

Query: 128 SNGAEGMSRFTPTTTVGGKGNRNPRVRRNNEGEMMASVPKFGSWDVRDPKSGDGYTAIFN 187
           S    G SR  PT            +R +   E +  VPKFG WD  +P S DGYT IFN
Sbjct: 124 SYDGTGKSRPKPT-----------NLRADESPEKVTVVPKFGDWDENNPSSADGYTHIFN 183

Query: 188 KVKTEKQIGGSKSPQAVPPLMNQTKQP 198
           KV+ E+  G + S  +  P    ++ P
Sbjct: 184 KVREERSSGANVSGSSRTPTHQSSRNP 197

[Close]
BLAST of Cla97C01G010030 vs. Swiss-Prot
Match: sp|O22633|NOI4_ARATH (Protein NOI4 OS=Arabidopsis thaliana OX=3702 GN=NOI4 PE=1 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 1.0e-05
Identity = 20/33 (60.61%), Postives = 25/33 (75.76%), Query Frame = 0 

Query: 148 VPKFGSWDVRDPKSGDGYTAIFNKVKTEKQIGG 181
           +PKFG WDV DP S +G+T IFNK + EK+ GG
Sbjct: 8   LPKFGEWDVNDPASAEGFTVIFNKARDEKKTGG 40

[Close]
BLAST of Cla97C01G010030 vs. Swiss-Prot
Match: sp|Q8S3M3|NOIL_ELAOL (NOI-like protein OS=Elaeis oleifera OX=80265 PE=2 SV=1)

HSP 1 Score: 45.8 bits (107), Expect = 7.2e-04
Identity = 50/219 (22.83%), Postives = 79/219 (36.07%), Query Frame = 0 

Query: 8   SHVPKFGNWDSDDVPYTICFENARELRATGI-TFDPNDPDTYPPA---AVVNQKSIPADN 67
           +HVPKFGNWD +++ YT  FE     +  G   F+PNDP+  P A     V Q    ++ 
Sbjct: 5   AHVPKFGNWDGENISYTTYFETVHRDKGDGSKIFNPNDPEENPQAFYPRTVAQDHQHSEK 64

Query: 68  RRHHDGRDYH--------------------------QRRAIGNSGSEKLSSERSGSDYAL 127
             +    DYH                           R        +   S   G+   +
Sbjct: 65  HHNDTSTDYHVVXXXXXXXXXXXXXXXXXXXEAPRPHRSPFQGVDMDSHRSRNHGTSATM 124

Query: 128 LKEAKQSG---------RKKKNSNGAEGMSRFTPTTTVGG--KGNRNPRVRRNNEGEMMA 186
               K++           ++ N + AEG S    TTT     K  +  R   +     ++
Sbjct: 125 SSSVKRNSDNWLPQHQHHRRTNKDLAEGKSWLFTTTTASSYTKSRKLSRECSSTTQSSIS 184

[Close]
BLAST of Cla97C01G010030 vs. TAIR10
Match: AT3G25070.1 (RPM1 interacting protein 4)

HSP 1 Score: 90.1 bits (222), Expect = 1.8e-18
Identity = 65/207 (31.40%), Postives = 98/207 (47.34%), Query Frame = 0 

Query: 8   SHVPKFGNWDSDD-VPYTICFENARELRATGI-TFDPNDPD----------TYPPAAVVN 67
           S+VPKFGNW++++ VPYT  F+ AR+ RA G    +PNDP+           +PP++   
Sbjct: 4   SNVPKFGNWEAEENVPYTAYFDKARKTRAPGSKIMNPNDPEYNSDSQSQAPPHPPSSRTK 63

Query: 68  QKSIPA--DNRRHHDGRDYHQRRAIGNSGSEKLSSERSGSDYALLKEAKQSGRKK---KN 127
            + +     +R H   R+  + +  G++G    S+E +        +      K    KN
Sbjct: 64  PEQVDTVRRSREHMRSREESELKQFGDAGGS--SNEAANKRQGRASQNNSYDNKSPLHKN 123

Query: 128 SNGAEGMSRFTPTTTVGGKGNRNPRVRRNNEGEMMASVPKFGSWDVRDPKSGDGYTAIFN 187
           S    G SR  PT            +R +   E +  VPKFG WD  +P S DGYT IFN
Sbjct: 124 SYDGTGKSRPKPT-----------NLRADESPEKVTVVPKFGDWDENNPSSADGYTHIFN 183

Query: 188 KVKTEKQIGGSKSPQAVPPLMNQTKQP 198
           KV+ E+  G + S  +  P    ++ P
Sbjct: 184 KVREERSSGANVSGSSRTPTHQSSRNP 197

[Close]
BLAST of Cla97C01G010030 vs. TAIR10
Match: AT2G04410.1 (RPM1-interacting protein 4 (RIN4) family protein)

HSP 1 Score: 53.5 bits (127), Expect = 1.9e-07
Identity = 26/54 (48.15%), Postives = 34/54 (62.96%), Query Frame = 0 

Query: 148 VPKFGSWDVRDPKSGDGYTAIFNKVKTEKQIGG-SKSPQAVPPLMNQTKQPIAK 201
           +PKFG WDV DP S +G+T IFNK + EK+ GG S SP    P  N+  + + K
Sbjct: 8   LPKFGEWDVNDPSSAEGFTVIFNKARNEKKGGGKSDSPGKDEPGYNKNGEVLEK 61

[Close]
BLAST of Cla97C01G010030 vs. TAIR10
Match: AT5G55850.2 (RPM1-interacting protein 4 (RIN4) family protein)

HSP 1 Score: 52.0 bits (123), Expect = 5.6e-07
Identity = 20/33 (60.61%), Postives = 25/33 (75.76%), Query Frame = 0 

Query: 148 VPKFGSWDVRDPKSGDGYTAIFNKVKTEKQIGG 181
           +PKFG WDV DP S +G+T IFNK + EK+ GG
Sbjct: 24  LPKFGEWDVNDPASAEGFTVIFNKARDEKKTGG 56

[Close]
BLAST of Cla97C01G010030 vs. TAIR10
Match: AT2G17660.1 (RPM1-interacting protein 4 (RIN4) family protein)

HSP 1 Score: 46.6 bits (109), Expect = 2.3e-05
Identity = 18/37 (48.65%), Postives = 26/37 (70.27%), Query Frame = 0 

Query: 147 SVPKFGSWDVRDPKSGDGYTAIFNKVKTEKQIGGSKS 184
           ++PKFG WDV DP + DG+T IF+K   +K+ G S +
Sbjct: 9   ALPKFGEWDVNDPATADGFTVIFSKAGEDKKTGRSST 45

[Close]
BLAST of Cla97C01G010030 vs. TAIR10
Match: AT4G35655.1 (RPM1-interacting protein 4 (RIN4) family protein)

HSP 1 Score: 45.8 bits (107), Expect = 4.0e-05
Identity = 18/36 (50.00%), Postives = 25/36 (69.44%), Query Frame = 0 

Query: 148 VPKFGSWDVRDPKSGDGYTAIFNKVKTEKQIGGSKS 184
           +PKFG WDV DP + +G+T IF+K   +K+ G S S
Sbjct: 10  LPKFGEWDVNDPATAEGFTVIFSKAGEDKKTGRSSS 45

The following BLAST results are available for this feature:
BLAST of Cla97C01G010030 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008458983.13.0e-9984.38PREDICTED: RPM1-interacting protein 4-like [Cucumis melo][more]
XP_011660296.11.3e-9481.33PREDICTED: RPM1-interacting protein 4-like [Cucumis sativus] >KGN66824.1 hypothe... [more]
XP_022955116.17.7e-6363.84RPM1-interacting protein 4-like [Cucurbita moschata][more]
XP_022994302.12.9e-6262.95RPM1-interacting protein 4-like [Cucurbita maxima][more]
XP_023525812.11.1e-6162.95RPM1-interacting protein 4-like [Cucurbita pepo subsp. pepo][more]
BLAST of Cla97C01G010030 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3C9P5|A0A1S3C9P5_CUCME2.0e-9984.38RPM1-interacting protein 4-like OS=Cucumis melo OX=3656 GN=LOC103498234 PE=4 SV=... [more]
tr|A0A0A0M0M0|A0A0A0M0M0_CUCSA8.6e-9581.33Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G699040 PE=4 SV=1[more]
tr|A0A061GGZ7|A0A061GGZ7_THECC8.2e-2939.00RPM1 interacting protein 4, putative OS=Theobroma cacao OX=3641 GN=TCM_030331 PE... [more]
tr|A0A0B0Q117|A0A0B0Q117_GOSAR2.1e-2438.30RPM1-interacting 4-like protein OS=Gossypium arboreum OX=29729 GN=F383_15209 PE=... [more]
tr|A0A1U8JYC5|A0A1U8JYC5_GOSHI2.1e-2437.76RPM1-interacting protein 4-like OS=Gossypium hirsutum OX=3635 GN=LOC107910066 PE... [more]
BLAST of Cla97C01G010030 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q8GYN5|RIN4_ARATH3.3e-1731.40RPM1-interacting protein 4 OS=Arabidopsis thaliana OX=3702 GN=RIN4 PE=1 SV=1[more]
sp|O22633|NOI4_ARATH1.0e-0560.61Protein NOI4 OS=Arabidopsis thaliana OX=3702 GN=NOI4 PE=1 SV=1[more]
sp|Q8S3M3|NOIL_ELAOL7.2e-0422.83NOI-like protein OS=Elaeis oleifera OX=80265 PE=2 SV=1[more]
BLAST of Cla97C01G010030 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G25070.11.8e-1831.40RPM1 interacting protein 4[more]
AT2G04410.11.9e-0748.15RPM1-interacting protein 4 (RIN4) family protein[more]
AT5G55850.25.6e-0760.61RPM1-interacting protein 4 (RIN4) family protein[more]
AT2G17660.12.3e-0548.65RPM1-interacting protein 4 (RIN4) family protein[more]
AT4G35655.14.0e-0550.00RPM1-interacting protein 4 (RIN4) family protein[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR008700TypeIII_avirulence_cleave
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0045087 innate immune response
biological_process GO:0002237 response to molecule of bacterial origin
biological_process GO:0006468 protein phosphorylation
biological_process GO:0009626 plant-type hypersensitive response
biological_process GO:0034051 negative regulation of plant-type hypersensitive response
biological_process GO:0002376 immune system process
biological_process GO:0009816 defense response to bacterium, incompatible interaction
biological_process GO:0010204 defense response signaling pathway, resistance gene-independent
biological_process GO:0006952 defense response
cellular_component GO:0005575 cellular_component
cellular_component GO:0012505 endomembrane system
cellular_component GO:0019897 extrinsic component of plasma membrane
cellular_component GO:0016020 membrane
cellular_component GO:0005886 plasma membrane
molecular_function GO:0003674 molecular_function
molecular_function GO:0005515 protein binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C01G010030.1Cla97C01G010030.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008700RIN4, pathogenic type III effector avirulence factor Avr cleavage sitePFAMPF05627AvrRpt-cleavagecoord: 146..177
e-value: 1.0E-15
score: 56.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 177..204
NoneNo IPR availablePANTHERPTHR33159:SF8SUBFAMILY NOT NAMEDcoord: 7..221
NoneNo IPR availablePANTHERPTHR33159FAMILY NOT NAMEDcoord: 7..221

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cla97C01G010030Cla004570Watermelon (97103) v1wmwmbB247
Cla97C01G010030Csa1G699040Cucumber (Chinese Long) v2cuwmbB011
Cla97C01G010030MELO3C021706Melon (DHL92) v3.5.1mewmbB141
Cla97C01G010030ClCG01G009910Watermelon (Charleston Gray)wcgwmbB089
Cla97C01G010030CSPI01G33990Wild cucumber (PI 183967)cpiwmbB011
Cla97C01G010030Cucsa.332480Cucumber (Gy14) v1cgywmbB574
Cla97C01G010030CmaCh18G005850Cucurbita maxima (Rimu)cmawmbB405
Cla97C01G010030CmoCh18G005620Cucurbita moschata (Rifu)cmowmbB377
Cla97C01G010030Lsi02G010850Bottle gourd (USVL1VR-Ls)lsiwmbB153
Cla97C01G010030CsGy1G032510Cucumber (Gy14) v2cgybwmbB011
Cla97C01G010030MELO3C021706.2Melon (DHL92) v3.6.1medwmbB131
Cla97C01G010030CsaV3_1G045860Cucumber (Chinese Long) v3cucwmbB010
Cla97C01G010030Bhi08G000661Wax gourdwgowmbB452
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cla97C01G010030Watermelon (97103) v2wmbwmbB000
Cla97C01G010030Silver-seed gourdcarwmbB0227
Cla97C01G010030Cucumber (Gy14) v2cgybwmbB396
Cla97C01G010030Cucumber (Gy14) v1cgywmbB018
Cla97C01G010030Cucurbita maxima (Rimu)cmawmbB213
Cla97C01G010030Cucurbita maxima (Rimu)cmawmbB394
Cla97C01G010030Cucurbita moschata (Rifu)cmowmbB200
Cla97C01G010030Cucurbita moschata (Rifu)cmowmbB195
Cla97C01G010030Wild cucumber (PI 183967)cpiwmbB436
Cla97C01G010030Cucumber (Chinese Long) v3cucwmbB432
Cla97C01G010030Bottle gourd (USVL1VR-Ls)lsiwmbB112
Cla97C01G010030Melon (DHL92) v3.6.1medwmbB506
Cla97C01G010030Melon (DHL92) v3.5.1mewmbB514
Cla97C01G010030Watermelon (Charleston Gray)wcgwmbB091
Cla97C01G010030Wax gourdwgowmbB401
Cla97C01G010030Wax gourdwgowmbB458