CmaCh18G005850 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh18G005850
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	RPM1-interacting 4-like protein
Location	Cma_Chr18 : 4049110 .. 4049784 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAGTGAGTAATTTTTTTTTTTTTTTTTTCACTAAAATTAATTCATAGATTATTAGAAACTAATTTTTTTTATTCATATGGTAGGGGGCAAACTCGTCAATTCACGTTCCCAAATTCGGAAATTGGGACACCGACGACGTACCCTACACCATCTGTTTCGAAAACGCCCGAGAACTCCGAGCCGCCGGCATCACCTTCGATCCCAACGATCCCGACACCTACCCGCCGGAGGTCTTCAAGCCAGCCGCGCACAACGGCGGAGAACACCAGCGGCGGCCACGCCAACAGCCAAATCGCGAGCGGGGAGCGATAATGAACTCAGGATCGGAGAAATTGAGCAGCGAGAGAAGCGGCTCCAATTACGCACTTCTGAAGAAGAGTAAGGAAAATGGAGTGGAAGGAATCAGTAGATTAGCTCCGGCTGTGGCCGGACATGGCGTAAACCCTAAGCCGGTGACGGCGTCGGTGCCGAAATTTGGGAGCTGGGATGCGAAGGATCCGAAATCGGGAGATGGGTATACGGCGATTTTCAATAAAATGAAGATTGAGAAGCAAATTGCAGCTTCAAATCCTCAGGCAGTTCCGCCATTGATGAACAAAACCAAGCAACCCATAGCTCACACGAACACTACCAGTGGATTCACTTCATTTGCTTCCAAGGTACCCACCTAA

mRNA sequence

ATGGCAGGGGCAAACTCGTCAATTCACGTTCCCAAATTCGGAAATTGGGACACCGACGACGTACCCTACACCATCTGTTTCGAAAACGCCCGAGAACTCCGAGCCGCCGGCATCACCTTCGATCCCAACGATCCCGACACCTACCCGCCGGAGGTCTTCAAGCCAGCCGCGCACAACGGCGGAGAACACCAGCGGCGGCCACGCCAACAGCCAAATCGCGAGCGGGGAGCGATAATGAACTCAGGATCGGAGAAATTGAGCAGCGAGAGAAGCGGCTCCAATTACGCACTTCTGAAGAAGAGTAAGGAAAATGGAGTGGAAGGAATCAGTAGATTAGCTCCGGCTGTGGCCGGACATGGCGTAAACCCTAAGCCGGTGACGGCGTCGGTGCCGAAATTTGGGAGCTGGGATGCGAAGGATCCGAAATCGGGAGATGGGTATACGGCGATTTTCAATAAAATGAAGATTGAGAAGCAAATTGCAGCTTCAAATCCTCAGGCAGTTCCGCCATTGATGAACAAAACCAAGCAACCCATAGCTCACACGAACACTACCAGTGGATTCACTTCATTTGCTTCCAAGGTACCCACCTAA

Coding sequence (CDS)

ATGGCAGGGGCAAACTCGTCAATTCACGTTCCCAAATTCGGAAATTGGGACACCGACGACGTACCCTACACCATCTGTTTCGAAAACGCCCGAGAACTCCGAGCCGCCGGCATCACCTTCGATCCCAACGATCCCGACACCTACCCGCCGGAGGTCTTCAAGCCAGCCGCGCACAACGGCGGAGAACACCAGCGGCGGCCACGCCAACAGCCAAATCGCGAGCGGGGAGCGATAATGAACTCAGGATCGGAGAAATTGAGCAGCGAGAGAAGCGGCTCCAATTACGCACTTCTGAAGAAGAGTAAGGAAAATGGAGTGGAAGGAATCAGTAGATTAGCTCCGGCTGTGGCCGGACATGGCGTAAACCCTAAGCCGGTGACGGCGTCGGTGCCGAAATTTGGGAGCTGGGATGCGAAGGATCCGAAATCGGGAGATGGGTATACGGCGATTTTCAATAAAATGAAGATTGAGAAGCAAATTGCAGCTTCAAATCCTCAGGCAGTTCCGCCATTGATGAACAAAACCAAGCAACCCATAGCTCACACGAACACTACCAGTGGATTCACTTCATTTGCTTCCAAGGTACCCACCTAA

Protein sequence

MAGANSSIHVPKFGNWDTDDVPYTICFENARELRAAGITFDPNDPDTYPPEVFKPAAHNGGEHQRRPRQQPNRERGAIMNSGSEKLSSERSGSNYALLKKSKENGVEGISRLAPAVAGHGVNPKPVTASVPKFGSWDAKDPKSGDGYTAIFNKMKIEKQIAASNPQAVPPLMNKTKQPIAHTNTTSGFTSFASKVPT

Homology

[Close]

BLAST of CmaCh18G005850 vs. Swiss-Prot
Match: RIN4_ARATH (RPM1-interacting protein 4 OS=Arabidopsis thaliana GN=RIN4 PE=1 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 3.9e-14
Identity = 71/209 (33.97%), Postives = 95/209 (45.45%), Query Frame = 1


Query: 9   HVPKFGNWDTDD-VPYTICFENARELRAAGITF-DPNDPD----------TYPPEV-FKP 68
           +VPKFGNW+ ++ VPYT  F+ AR+ RA G    +PNDP+           +PP    KP
Sbjct: 5   NVPKFGNWEAEENVPYTAYFDKARKTRAPGSKIMNPNDPEYNSDSQSQAPPHPPSSRTKP 64

Query: 69  ----AAHNGGEHQRRPRQQPNRERGAIMNSGSE-------KLSSERSGSNYALLKKSKEN 128
                     EH R   +   ++ G    S +E       + S   S  N + L K+  +
Sbjct: 65  EQVDTVRRSREHMRSREESELKQFGDAGGSSNEAANKRQGRASQNNSYDNKSPLHKNSYD 124

Query: 129 GVEGISRLAPAVAGHGVNPKPVTASVPKFGSWDAKDPKSGDGYTAIFNKMKIEKQIAA-- 188
           G  G SR  P       +P+ VT  VPKFG WD  +P S DGYT IFNK++ E+   A  
Sbjct: 125 GT-GKSRPKPTNLRADESPEKVTV-VPKFGDWDENNPSSADGYTHIFNKVREERSSGANV 184

Query: 189 SNPQAVPPLMNKTKQPIAHTNTTSGFTSF 192
           S     P     T Q   + N TS    F
Sbjct: 185 SGSSRTP-----THQSSRNPNNTSSCCCF 206

[Close]

BLAST of CmaCh18G005850 vs. TrEMBL
Match: A0A0A0M0M0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G699040 PE=4 SV=1)

HSP 1 Score: 225.3 bits (573), Expect = 6.4e-56
Identity = 126/216 (58.33%), Postives = 145/216 (67.13%), Query Frame = 1


Query: 1   MAGANSSIHVPKFGNWDTDDVPYTICFENARELRAAGITFDPNDPDTYPPEVFKPAAHNG 60
           MAG  SS HVPKFGNWD+DDVPYTI FENAREL+AAGITFDPNDPDTYPP        + 
Sbjct: 1   MAGPKSSSHVPKFGNWDSDDVPYTIYFENARELQAAGITFDPNDPDTYPPTAVANQNSSP 60

Query: 61  GEHQRRPRQQPNRERGAIMNSGSEKLSSERSGSNYALL-------KKSKENGVEGISRLA 120
             H R      + +R  I+NSGSEKLSSERS S+YALL       KK   NG EG+SR +
Sbjct: 61  ANHHRYHDGDDSHQRREIVNSGSEKLSSERSDSDYALLKAKQSGRKKKNSNGAEGMSRFS 120

Query: 121 PAVAGHGVNPKP---------VTASVPKFGSWDAKDPKSGDGYTAIFNKMKIEKQIAASN 180
           PA      N  P         + ASVPKFGSWD +DPKSGDGYTAIFNK+KIEKQ+  SN
Sbjct: 121 PATVDGKGNRNPRVRRNNEGEMMASVPKFGSWDVRDPKSGDGYTAIFNKVKIEKQVGGSN 180

Query: 181 -PQAVPPLMNKTKQPIAHT----NTTSGFTSFASKV 196
             Q+VP LMN+TKQPI  T    +++ G TSF SK+
Sbjct: 181 DTQSVPALMNQTKQPITQTTVGKSSSHGSTSFGSKI 216

[Close]

BLAST of CmaCh18G005850 vs. TrEMBL
Match: D7TYX9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0516g00010 PE=4 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 2.5e-23
Identity = 81/218 (37.16%), Postives = 110/218 (50.46%), Query Frame = 1


Query: 9   HVPKFGNWDTDDVPYTICFENARELRAA--GITFDPNDPDTYP----------------- 68
           HVPKFGNWD D+VPYT  F+NAR+ +    G+  +PNDP+  P                 
Sbjct: 9   HVPKFGNWDNDNVPYTAYFDNARKEKTGPTGLRINPNDPEENPEAFMFGRSEATPPHHLN 68

Query: 69  PEVFKPAAHNGGE-------HQRRPRQQPNRERGAIMNSGSEKLSSERSGSNYALLKKSK 128
           P+   P  +N  E       H+R P  Q  R  G   +  SE   SE+S  +Y+ L+K  
Sbjct: 69  PQKPPPEENNQVEGHRRRDSHRRSPSDQQQRSGGTSRSINSES-GSEKSNLDYSHLRKKS 128

Query: 129 ENGVEGISRLAPAVAGHGVN-------PKPV-----TASVPKFGSWDAKDPKSGDGYTAI 188
           +    G S L+P+V G           P P       ASVPKFG+WD  DP SG+G+T I
Sbjct: 129 QLSDGGSSSLSPSVPGPSHTRLKSIGTPPPDDHAHRVASVPKFGAWDETDPTSGEGFTVI 188

[Close]

BLAST of CmaCh18G005850 vs. TrEMBL
Match: A0A059CFL7_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_D01380 PE=4 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 1.8e-21
Identity = 81/209 (38.76%), Postives = 115/209 (55.02%), Query Frame = 1


Query: 1   MAGANSSIHVPKFGNWDTDDVPYTICFENARELRAAGITFDPNDPDTYPPEVFKPAA--H 60
           MA +    HVPKFGNWD+D++PYT CFENAR    AG+  +PNDP+   PE+    A  H
Sbjct: 1   MALSQQHSHVPKFGNWDSDNIPYTACFENARR-EKAGVKMNPNDPEE-NPEIQASVAFEH 60

Query: 61  NGGE-------HQRRPRQQPNR--ERGAIMN-SGSEKLSS-ERSGSNYALLKKSKENGV- 120
           N  E       H+R P  Q  R   RG++ + SGSEK SS  R  S+    +  ++ G+ 
Sbjct: 61  NISEGHRRFNVHRRTPSDQHKRSVSRGSVRSESGSEKSSSVSRWNSSQHHARPDRKKGLT 120

Query: 121 EGISRLAPAVAG--------HGVNPKPVT----ASVPKFGSWDAKDPKSGDGYTAIFNKM 180
           E  + L+ +VA          G  P   +     S+PKFG+WD  DP+SG+G+T IF+K+
Sbjct: 121 ESSNSLSSSVASVPKHARQRSGSQPSDDSHRRAPSIPKFGAWDETDPRSGEGFTVIFSKV 180

Query: 181 KIEKQIAASNPQAVPPLMNKTKQPIAHTN 184
           K E+  A+S    +PP      + IAH++
Sbjct: 181 KEERHNASSKIPVLPP------EQIAHSS 201

[Close]

BLAST of CmaCh18G005850 vs. TrEMBL
Match: A0A166CKY8_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_004869 PE=4 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 4.3e-20
Identity = 78/206 (37.86%), Postives = 105/206 (50.97%), Query Frame = 1


Query: 7   SIHVPKFGNWDTDD-VPYTICFENARELRAAGITFDPNDPDTYPP----------EVFK- 66
           S HVPKFGNW  +D VPYT  F++AR+ +A G   +PNDP+  P           +VF+ 
Sbjct: 4   SAHVPKFGNWGGEDNVPYTAYFDSARKSKAGGAMINPNDPEQNPEAFMFGSDDDVKVFQA 63

Query: 67  PAAHNGGEHQRRPRQQPNRE--RGAIMNSGS--------------EKLSSERSGSNYALL 126
           P  HN       P++  + E  +G++  S S               + SS+RS SN +L 
Sbjct: 64  PLQHNISNDIEAPKENHHSEGNKGSLKRSSSGSGQNYKNGVKSVTSETSSDRSNSNSSLP 123

Query: 127 K-------KSKENGVEGISRLAPAVA------GHGVNPKPVT--ASVPKFGSWDAKDPKS 170
                   + K+N ++ IS   P+        GH +     T  ASVP FG WD +DP S
Sbjct: 124 SNHRIARTERKKNSIDNISFYPPSPGPNRLRNGHNLYDDFSTRSASVPMFGQWDERDPTS 183

[Close]

BLAST of CmaCh18G005850 vs. TrEMBL
Match: A0A061GGZ7_THECC (RPM1 interacting protein 4, putative OS=Theobroma cacao GN=TCM_030331 PE=4 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 4.8e-19
Identity = 79/215 (36.74%), Postives = 102/215 (47.44%), Query Frame = 1


Query: 9   HVPKFGNWDTDDVPYTICFENARELRAAGITFDPNDPDTYP-----------------PE 68
           HVPKFG+WD D++PYT  FENAR+ RA GI  +PNDP+  P                 P 
Sbjct: 76  HVPKFGDWDNDNLPYTAYFENARKERA-GIRMNPNDPEENPEAFMYTGGGLESNCDCQPV 135

Query: 69  VFKPAA-----------HNGGEHQRRPRQQPNRE------------RGAIMNSGSEKLSS 128
              PAA           HN G H R+    PNR             R     SGSEK +S
Sbjct: 136 QVPPAAGSQKSIPADKNHNDG-HSRQ--NAPNRNGSYDYQKSVRSHRSMASESGSEKSNS 195

Query: 129 ERSGSNYALLKKS--KENGVEGISRLAPAVAGHGVNPKPV-----------TASVPKFGS 171
           + S   ++  + +  ++ G  G S  + +V+G   +               TAS+PKFG 
Sbjct: 196 DHSLLRFSHRRANSGQKKGRVGGSSFSSSVSGQFTHRNGSYQSDNNRQHRRTASIPKFGE 255

[Close]

BLAST of CmaCh18G005850 vs. TAIR10
Match: AT3G25070.1 (AT3G25070.1 RPM1 interacting protein 4)

HSP 1 Score: 79.7 bits (195), Expect = 2.2e-15
Identity = 71/209 (33.97%), Postives = 95/209 (45.45%), Query Frame = 1


Query: 9   HVPKFGNWDTDD-VPYTICFENARELRAAGITF-DPNDPD----------TYPPEV-FKP 68
           +VPKFGNW+ ++ VPYT  F+ AR+ RA G    +PNDP+           +PP    KP
Sbjct: 5   NVPKFGNWEAEENVPYTAYFDKARKTRAPGSKIMNPNDPEYNSDSQSQAPPHPPSSRTKP 64

Query: 69  ----AAHNGGEHQRRPRQQPNRERGAIMNSGSE-------KLSSERSGSNYALLKKSKEN 128
                     EH R   +   ++ G    S +E       + S   S  N + L K+  +
Sbjct: 65  EQVDTVRRSREHMRSREESELKQFGDAGGSSNEAANKRQGRASQNNSYDNKSPLHKNSYD 124

Query: 129 GVEGISRLAPAVAGHGVNPKPVTASVPKFGSWDAKDPKSGDGYTAIFNKMKIEKQIAA-- 188
           G  G SR  P       +P+ VT  VPKFG WD  +P S DGYT IFNK++ E+   A  
Sbjct: 125 GT-GKSRPKPTNLRADESPEKVTV-VPKFGDWDENNPSSADGYTHIFNKVREERSSGANV 184

Query: 189 SNPQAVPPLMNKTKQPIAHTNTTSGFTSF 192
           S     P     T Q   + N TS    F
Sbjct: 185 SGSSRTP-----THQSSRNPNNTSSCCCF 206

[Close]

BLAST of CmaCh18G005850 vs. NCBI nr
Match: gi|659118177|ref|XP_008458983.1| (PREDICTED: RPM1-interacting protein 4-like [Cucumis melo])

HSP 1 Score: 235.3 bits (599), Expect = 8.9e-59
Identity = 129/216 (59.72%), Postives = 147/216 (68.06%), Query Frame = 1


Query: 1   MAGANSSIHVPKFGNWDTDDVPYTICFENARELRAAGITFDPNDPDTYPPEVFKPAAHNG 60
           MAG  SS HVPKFGNWD+DDVPYTI FENAREL+AAG+TFDPNDPDTYPP VF       
Sbjct: 1   MAGTKSSSHVPKFGNWDSDDVPYTIFFENARELQAAGVTFDPNDPDTYPPAVFANQNSIP 60

Query: 61  GEHQRRPRQQPNRERGAIMNSGSEKLSSERSGSNYALL-------KKSKENGVEGISRLA 120
            +H R    + + +R  I+NSGSEKLSSERS S+YALL       KK   NG EG+SR +
Sbjct: 61  ADHHRHHDGEDSHQRREIVNSGSEKLSSERSDSDYALLKAKQSGRKKKNSNGAEGMSRFS 120

Query: 121 PAVAGHGVNPKP---------VTASVPKFGSWDAKDPKSGDGYTAIFNKMKIEKQIAAS- 180
           P       N  P         + ASVPKFGSWD +DPKSGDGYTAIFNK+KIEKQI  S 
Sbjct: 121 PTTVDGKGNRNPRVRRNNEGEMMASVPKFGSWDVRDPKSGDGYTAIFNKVKIEKQIGGSN 180

Query: 181 NPQAVPPLMNKTKQPIAHT----NTTSGFTSFASKV 196
           NPQ VPPLMN+TKQP+  T     +T G TSF SK+
Sbjct: 181 NPQTVPPLMNQTKQPMTQTTVAKTSTQGSTSFVSKI 216

[Close]

BLAST of CmaCh18G005850 vs. NCBI nr
Match: gi|778664446|ref|XP_011660296.1| (PREDICTED: RPM1-interacting protein 4-like [Cucumis sativus])

HSP 1 Score: 225.3 bits (573), Expect = 9.2e-56
Identity = 126/216 (58.33%), Postives = 145/216 (67.13%), Query Frame = 1


Query: 1   MAGANSSIHVPKFGNWDTDDVPYTICFENARELRAAGITFDPNDPDTYPPEVFKPAAHNG 60
           MAG  SS HVPKFGNWD+DDVPYTI FENAREL+AAGITFDPNDPDTYPP        + 
Sbjct: 1   MAGPKSSSHVPKFGNWDSDDVPYTIYFENARELQAAGITFDPNDPDTYPPTAVANQNSSP 60

Query: 61  GEHQRRPRQQPNRERGAIMNSGSEKLSSERSGSNYALL-------KKSKENGVEGISRLA 120
             H R      + +R  I+NSGSEKLSSERS S+YALL       KK   NG EG+SR +
Sbjct: 61  ANHHRYHDGDDSHQRREIVNSGSEKLSSERSDSDYALLKAKQSGRKKKNSNGAEGMSRFS 120

Query: 121 PAVAGHGVNPKP---------VTASVPKFGSWDAKDPKSGDGYTAIFNKMKIEKQIAASN 180
           PA      N  P         + ASVPKFGSWD +DPKSGDGYTAIFNK+KIEKQ+  SN
Sbjct: 121 PATVDGKGNRNPRVRRNNEGEMMASVPKFGSWDVRDPKSGDGYTAIFNKVKIEKQVGGSN 180

Query: 181 -PQAVPPLMNKTKQPIAHT----NTTSGFTSFASKV 196
             Q+VP LMN+TKQPI  T    +++ G TSF SK+
Sbjct: 181 DTQSVPALMNQTKQPITQTTVGKSSSHGSTSFGSKI 216

[Close]

BLAST of CmaCh18G005850 vs. NCBI nr
Match: gi|359496977|ref|XP_002263923.2| (PREDICTED: RPM1-interacting protein 4 isoform X1 [Vitis vinifera])

HSP 1 Score: 117.1 bits (292), Expect = 3.5e-23
Identity = 81/218 (37.16%), Postives = 110/218 (50.46%), Query Frame = 1


Query: 9   HVPKFGNWDTDDVPYTICFENARELRAA--GITFDPNDPDTYP----------------- 68
           HVPKFGNWD D+VPYT  F+NAR+ +    G+  +PNDP+  P                 
Sbjct: 9   HVPKFGNWDNDNVPYTAYFDNARKEKTGPTGLRINPNDPEENPEAFMFGRSEATPPHHLN 68

Query: 69  PEVFKPAAHNGGE-------HQRRPRQQPNRERGAIMNSGSEKLSSERSGSNYALLKKSK 128
           P+   P  +N  E       H+R P  Q  R  G   +  SE   SE+S  +Y+ L+K  
Sbjct: 69  PQKPPPEENNQVEGHRRRDSHRRSPSDQQQRSGGTSRSINSES-GSEKSNLDYSHLRKKS 128

Query: 129 ENGVEGISRLAPAVAGHGVN-------PKPV-----TASVPKFGSWDAKDPKSGDGYTAI 188
           +    G S L+P+V G           P P       ASVPKFG+WD  DP SG+G+T I
Sbjct: 129 QLSDGGSSSLSPSVPGPSHTRLKSIGTPPPDDHAHRVASVPKFGAWDETDPTSGEGFTVI 188

[Close]

BLAST of CmaCh18G005850 vs. NCBI nr
Match: gi|731439877|ref|XP_010647139.1| (PREDICTED: RPM1-interacting protein 4 isoform X2 [Vitis vinifera])

HSP 1 Score: 117.1 bits (292), Expect = 3.5e-23
Identity = 81/218 (37.16%), Postives = 110/218 (50.46%), Query Frame = 1


Query: 9   HVPKFGNWDTDDVPYTICFENARELRAA--GITFDPNDPDTYP----------------- 68
           HVPKFGNWD D+VPYT  F+NAR+ +    G+  +PNDP+  P                 
Sbjct: 6   HVPKFGNWDNDNVPYTAYFDNARKEKTGPTGLRINPNDPEENPEAFMFGRSEATPPHHLN 65

Query: 69  PEVFKPAAHNGGE-------HQRRPRQQPNRERGAIMNSGSEKLSSERSGSNYALLKKSK 128
           P+   P  +N  E       H+R P  Q  R  G   +  SE   SE+S  +Y+ L+K  
Sbjct: 66  PQKPPPEENNQVEGHRRRDSHRRSPSDQQQRSGGTSRSINSES-GSEKSNLDYSHLRKKS 125

Query: 129 ENGVEGISRLAPAVAGHGVN-------PKPV-----TASVPKFGSWDAKDPKSGDGYTAI 188
           +    G S L+P+V G           P P       ASVPKFG+WD  DP SG+G+T I
Sbjct: 126 QLSDGGSSSLSPSVPGPSHTRLKSIGTPPPDDHAHRVASVPKFGAWDETDPTSGEGFTVI 185

[Close]

BLAST of CmaCh18G005850 vs. NCBI nr
Match: gi|731441020|ref|XP_010646963.1| (PREDICTED: RPM1-interacting protein 4-like, partial [Vitis vinifera])

HSP 1 Score: 115.2 bits (287), Expect = 1.3e-22
Identity = 80/218 (36.70%), Postives = 109/218 (50.00%), Query Frame = 1


Query: 9   HVPKFGNWDTDDVPYTICFENARELRAA--GITFDPNDPDTYP----------------- 68
           HVPKFGNWD D+VPYT  F+NAR+ +    G+  +PNDP+  P                 
Sbjct: 6   HVPKFGNWDNDNVPYTAYFDNARKEKTGPTGLRINPNDPEENPEAFMFGRSEATPPHHLN 65

Query: 69  PEVFKPAAHNGGE-------HQRRPRQQPNRERGAIMNSGSEKLSSERSGSNYALLKKSK 128
           P+   P  +N  E       H+R P     R  G   +  SE   SE+S  +Y+ L+K  
Sbjct: 66  PQKPPPEENNQVEGHRRRDSHRRSPSDHQQRSGGTSRSINSES-GSEKSNLDYSHLRKKS 125

Query: 129 ENGVEGISRLAPAVAGHGVN-------PKPV-----TASVPKFGSWDAKDPKSGDGYTAI 188
           +    G S L+P+V G           P P       ASVPKFG+WD  DP SG+G+T I
Sbjct: 126 QLSDGGSSSLSPSVPGPSHTRLKSIGTPPPDDHAHRVASVPKFGAWDETDPTSGEGFTVI 185

The following BLAST results are available for this feature:

BLAST of CmaCh18G005850 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RIN4_ARATH	3.9e-14	33.97	RPM1-interacting protein 4 OS=Arabidopsis thaliana GN=RIN4 PE=1 SV=1	[more]

BLAST of CmaCh18G005850 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0M0M0_CUCSA	6.4e-56	58.33	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G699040 PE=4 SV=1	[more]
D7TYX9_VITVI	2.5e-23	37.16	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0516g00010 PE=4 SV=...	[more]
A0A059CFL7_EUCGR	1.8e-21	38.76	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_D01380 PE=4 SV=1	[more]
A0A166CKY8_DAUCA	4.3e-20	37.86	Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_004869 PE=4 SV=1	[more]
A0A061GGZ7_THECC	4.8e-19	36.74	RPM1 interacting protein 4, putative OS=Theobroma cacao GN=TCM_030331 PE=4 SV=1	[more]

BLAST of CmaCh18G005850 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G25070.1	2.2e-15	33.97	RPM1 interacting protein 4	[more]

BLAST of CmaCh18G005850 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659118177\|ref\|XP_008458983.1\|	8.9e-59	59.72	PREDICTED: RPM1-interacting protein 4-like [Cucumis melo]	[more]
gi\|778664446\|ref\|XP_011660296.1\|	9.2e-56	58.33	PREDICTED: RPM1-interacting protein 4-like [Cucumis sativus]	[more]
gi\|359496977\|ref\|XP_002263923.2\|	3.5e-23	37.16	PREDICTED: RPM1-interacting protein 4 isoform X1 [Vitis vinifera]	[more]
gi\|731439877\|ref\|XP_010647139.1\|	3.5e-23	37.16	PREDICTED: RPM1-interacting protein 4 isoform X2 [Vitis vinifera]	[more]
gi\|731441020\|ref\|XP_010646963.1\|	1.3e-22	36.70	PREDICTED: RPM1-interacting protein 4-like, partial [Vitis vinifera]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR008700	TypeIII_avirulence_cleave

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh18G005850.1	CmaCh18G005850.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008700	RIN4, pathogenic type III effector avirulence factor Avr cleavage site	PFAM	PF05627	AvrRpt-cleavage	coord: 128..159 score: 2.2
None	No IPR available	PANTHER	PTHR33159	FAMILY NOT NAMED	coord: 1..170 score: 3.3
None	No IPR available	PANTHER	PTHR33159:SF8	SUBFAMILY NOT NAMED	coord: 1..170 score: 3.3

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh18G005850	Cucsa.332480	Cucumber (Gy14) v1	cgycmaB0913
CmaCh18G005850	Csa1G699040	Cucumber (Chinese Long) v2	cmacuB396
CmaCh18G005850	MELO3C021706	Melon (DHL92) v3.5.1	cmameB358
CmaCh18G005850	ClCG01G009910	Watermelon (Charleston Gray)	cmawcgB350
CmaCh18G005850	CSPI01G33990	Wild cucumber (PI 183967)	cmacpiB400
CmaCh18G005850	CmoCh18G005620	Cucurbita moschata (Rifu)	cmacmoB407
CmaCh18G005850	Lsi02G010850	Bottle gourd (USVL1VR-Ls)	cmalsiB375
CmaCh18G005850	Cp4.1LG02g09510	Cucurbita pepo (Zucchini)	cmacpeB447
CmaCh18G005850	MELO3C021706.2	Melon (DHL92) v3.6.1	cmamedB416
CmaCh18G005850	CsaV3_1G045860	Cucumber (Chinese Long) v3	cmacucB0471
CmaCh18G005850	Cla97C01G010030	Watermelon (97103) v2	cmawmbB405
CmaCh18G005850	Bhi08G000661	Wax gourd	cmawgoB0535
CmaCh18G005850	CsGy1G032510	Cucumber (Gy14) v2	cgybcmaB091

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh18G005850	Watermelon (97103) v2	cmawmbB402
CmaCh18G005850	Watermelon (97103) v2	cmawmbB394
CmaCh18G005850	Wax gourd	cmawgoB0515
CmaCh18G005850	Wax gourd	cmawgoB0532
CmaCh18G005850	Cucurbita maxima (Rimu)	cmacmaB216
CmaCh18G005850	Cucurbita maxima (Rimu)	cmacmaB399
CmaCh18G005850	Cucumber (Gy14) v1	cgycmaB0040
CmaCh18G005850	Cucumber (Gy14) v1	cgycmaB0914
CmaCh18G005850	Cucurbita moschata (Rifu)	cmacmoB398
CmaCh18G005850	Cucurbita moschata (Rifu)	cmacmoB412
CmaCh18G005850	Cucurbita moschata (Rifu)	cmacmoB419
CmaCh18G005850	Cucurbita moschata (Rifu)	cmacmoB428
CmaCh18G005850	Wild cucumber (PI 183967)	cmacpiB428
CmaCh18G005850	Wild cucumber (PI 183967)	cmacpiB404
CmaCh18G005850	Cucumber (Chinese Long) v2	cmacuB400
CmaCh18G005850	Cucumber (Chinese Long) v2	cmacuB425
CmaCh18G005850	Melon (DHL92) v3.5.1	cmameB364
CmaCh18G005850	Watermelon (Charleston Gray)	cmawcgB342
CmaCh18G005850	Watermelon (Charleston Gray)	cmawcgB349
CmaCh18G005850	Watermelon (97103) v1	cmawmB385
CmaCh18G005850	Watermelon (97103) v1	cmawmB389
CmaCh18G005850	Cucurbita pepo (Zucchini)	cmacpeB415
CmaCh18G005850	Cucurbita pepo (Zucchini)	cmacpeB419
CmaCh18G005850	Cucurbita pepo (Zucchini)	cmacpeB438
CmaCh18G005850	Cucurbita pepo (Zucchini)	cmacpeB448
CmaCh18G005850	Bottle gourd (USVL1VR-Ls)	cmalsiB367
CmaCh18G005850	Bottle gourd (USVL1VR-Ls)	cmalsiB369
CmaCh18G005850	Cucumber (Gy14) v2	cgybcmaB095
CmaCh18G005850	Cucumber (Gy14) v2	cgybcmaB771
CmaCh18G005850	Melon (DHL92) v3.6.1	cmamedB414
CmaCh18G005850	Melon (DHL92) v3.6.1	cmamedB423
CmaCh18G005850	Silver-seed gourd	carcmaB0149
CmaCh18G005850	Silver-seed gourd	carcmaB0907
CmaCh18G005850	Cucumber (Chinese Long) v3	cmacucB0509