MELO3C021706.2 (gene) Melon (DHL92) v3.6.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C021706.2
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.6.1)
Description	RPM1-interacting protein 4
Location	chr12 : 15888725 .. 15890152 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATAAACACATCGACAGCTCACTTAGAAACCATCGAACTATAATTGTCTGATAAGAAACAAAAAACTTCCAATACCTCCTTACTCCTCCATCTTCTTTTCTTCTCTAACAATACGAACTCTTCCATACTCCGCCGTTCCCGTCATTGCCGTTGCCGCCGCAGCAACCAAGGAGCTGCCACAGCTGATGGCAGTGAGTGTGTTTTCTTGTTCTTATTTGTTTCTCTTCTTCTTTTTCCAGCAACGTAAAAACCAAAACAAAACCCAACTGCGTAAATGATATCGTGGACGTGGAATTATTAATTAGAAGTAAGTTTGTGCTAATCTTCAATTAATTTAATGTAATGGGCAGGGGACAAAGTCGTCATCTCACGTTCCGAAATTCGGTAATTGGGATTCCGATGACGTGCCGTACACCATCTTTTTCGAAAACGCCCGTGAACTCCAAGCCGCCGGCGTCACTTTCGATCCCAACGATCCCGACACCTACCCGCCGGCCGTCTTCGCAAACCAAAATTCAATCCCAGCCGACCACCACCGTCATCACGATGGCGAAGACTCCCACCAGCGCCGCGAGATTGTAAACTCCGGATCGGAGAAATTGAGCAGTGAGAGAAGCGATTCGGATTACGCGCTTCTGAAGGCGAAACAGAGTGGGAGGAAGAAGAAAAATAGCAATGGAGCGGAAGGAATGAGTAGATTTTCTCCGACGACGGTGGACGGAAAGGGTAATCGGAACCCTAGGGTTCGGCGGAATAATGAGGGGGAAATGATGGCATCGGTGCCGAAATTTGGGAGCTGGGATGTGAGGGATCCGAAATCGGGAGATGGTTATACGGCGATATTCAATAAAGTGAAGATAGAGAAGCAAATTGGAGGTTCTAATAATCCTCAGACCGTTCCGCCATTGATGAATCAAACCAAGCAACCAATGACTCAAACTACTGTTGCTAAAACTTCTACTCAAGGATCCACTTCATTTGTTTCCAAGGTACCTCCTCTTTTTTCTTTTTCATGTTTCTATTAATTTAGGTTATGTTTCTTAATTATTTGGTCATTTCATGAAAACTTTACATCTTTGGTTTGTAAAATTTGTTAAAAAATTTTTTTTTAAAAAGAAAAAATATATATGAAATTTAAAAGCAAAACAAACAATAAGTTGTAAATTATGAAATGATTTTTAAAGTTTTGTTTTTAAATAGTGAAATAATTATTTTGTTTATTTATGCAGATATGCTGTTGTTTAGGTCCAAATTAGTGAAGCACATCATCACTGCTCCAAGAATAGACTCAAAACGATGCATCCATATTGCTGATTTTTCCACTTTTATAAAATCTAATCTATATCCCTTCTTCTTGTATTTTGATTAAATATCAATAATAATTATACTTAGCTTAAATTATAAATAAAAATTATTATTATAAATCGCA

mRNA sequence

ATAAACACATCGACAGCTCACTTAGAAACCATCGAACTATAATTGTCTGATAAGAAACAAAAAACTTCCAATACCTCCTTACTCCTCCATCTTCTTTTCTTCTCTAACAATACGAACTCTTCCATACTCCGCCGTTCCCGTCATTGCCGTTGCCGCCGCAGCAACCAAGGAGCTGCCACAGCTGATGGCAGGGACAAAGTCGTCATCTCACGTTCCGAAATTCGGTAATTGGGATTCCGATGACGTGCCGTACACCATCTTTTTCGAAAACGCCCGTGAACTCCAAGCCGCCGGCGTCACTTTCGATCCCAACGATCCCGACACCTACCCGCCGGCCGTCTTCGCAAACCAAAATTCAATCCCAGCCGACCACCACCGTCATCACGATGGCGAAGACTCCCACCAGCGCCGCGAGATTGTAAACTCCGGATCGGAGAAATTGAGCAGTGAGAGAAGCGATTCGGATTACGCGCTTCTGAAGGCGAAACAGAGTGGGAGGAAGAAGAAAAATAGCAATGGAGCGGAAGGAATGAGTAGATTTTCTCCGACGACGGTGGACGGAAAGGGTAATCGGAACCCTAGGGTTCGGCGGAATAATGAGGGGGAAATGATGGCATCGGTGCCGAAATTTGGGAGCTGGGATGTGAGGGATCCGAAATCGGGAGATGGTTATACGGCGATATTCAATAAAGTGAAGATAGAGAAGCAAATTGGAGGTTCTAATAATCCTCAGACCGTTCCGCCATTGATGAATCAAACCAAGCAACCAATGACTCAAACTACTGTTGCTAAAACTTCTACTCAAGGATCCACTTCATTTGTTTCCAAGATATGCTGTTGTTTAGGTCCAAATTAGTGAAGCACATCATCACTGCTCCAAGAATAGACTCAAAACGATGCATCCATATTGCTGATTTTTCCACTTTTATAAAATCTAATCTATATCCCTTCTTCTTGTATTTTGATTAAATATCAATAATAATTATACTTAGCTTAAATTATAAATAAAAATTATTATTATAAATCGCA

Coding sequence (CDS)

ATGGCAGGGACAAAGTCGTCATCTCACGTTCCGAAATTCGGTAATTGGGATTCCGATGACGTGCCGTACACCATCTTTTTCGAAAACGCCCGTGAACTCCAAGCCGCCGGCGTCACTTTCGATCCCAACGATCCCGACACCTACCCGCCGGCCGTCTTCGCAAACCAAAATTCAATCCCAGCCGACCACCACCGTCATCACGATGGCGAAGACTCCCACCAGCGCCGCGAGATTGTAAACTCCGGATCGGAGAAATTGAGCAGTGAGAGAAGCGATTCGGATTACGCGCTTCTGAAGGCGAAACAGAGTGGGAGGAAGAAGAAAAATAGCAATGGAGCGGAAGGAATGAGTAGATTTTCTCCGACGACGGTGGACGGAAAGGGTAATCGGAACCCTAGGGTTCGGCGGAATAATGAGGGGGAAATGATGGCATCGGTGCCGAAATTTGGGAGCTGGGATGTGAGGGATCCGAAATCGGGAGATGGTTATACGGCGATATTCAATAAAGTGAAGATAGAGAAGCAAATTGGAGGTTCTAATAATCCTCAGACCGTTCCGCCATTGATGAATCAAACCAAGCAACCAATGACTCAAACTACTGTTGCTAAAACTTCTACTCAAGGATCCACTTCATTTGTTTCCAAGATATGCTGTTGTTTAGGTCCAAATTAG

Protein sequence

MAGTKSSSHVPKFGNWDSDDVPYTIFFENARELQAAGVTFDPNDPDTYPPAVFANQNSIPADHHRHHDGEDSHQRREIVNSGSEKLSSERSDSDYALLKAKQSGRKKKNSNGAEGMSRFSPTTVDGKGNRNPRVRRNNEGEMMASVPKFGSWDVRDPKSGDGYTAIFNKVKIEKQIGGSNNPQTVPPLMNQTKQPMTQTTVAKTSTQGSTSFVSKICCCLGPN

Homology

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BLAST of MELO3C021706.2 vs. NCBI nr
Match: XP_008458983.1 (PREDICTED: RPM1-interacting protein 4-like [Cucumis melo])

HSP 1 Score: 450.7 bits (1158), Expect = 3.0e-123
Identity = 223/223 (100.00%), Postives = 223/223 (100.00%), Query Frame = 0


Query: 1   MAGTKSSSHVPKFGNWDSDDVPYTIFFENARELQAAGVTFDPNDPDTYPPAVFANQNSIP 60
           MAGTKSSSHVPKFGNWDSDDVPYTIFFENARELQAAGVTFDPNDPDTYPPAVFANQNSIP
Sbjct: 1   MAGTKSSSHVPKFGNWDSDDVPYTIFFENARELQAAGVTFDPNDPDTYPPAVFANQNSIP 60

Query: 61  ADHHRHHDGEDSHQRREIVNSGSEKLSSERSDSDYALLKAKQSGRKKKNSNGAEGMSRFS 120
           ADHHRHHDGEDSHQRREIVNSGSEKLSSERSDSDYALLKAKQSGRKKKNSNGAEGMSRFS
Sbjct: 61  ADHHRHHDGEDSHQRREIVNSGSEKLSSERSDSDYALLKAKQSGRKKKNSNGAEGMSRFS 120

Query: 121 PTTVDGKGNRNPRVRRNNEGEMMASVPKFGSWDVRDPKSGDGYTAIFNKVKIEKQIGGSN 180
           PTTVDGKGNRNPRVRRNNEGEMMASVPKFGSWDVRDPKSGDGYTAIFNKVKIEKQIGGSN
Sbjct: 121 PTTVDGKGNRNPRVRRNNEGEMMASVPKFGSWDVRDPKSGDGYTAIFNKVKIEKQIGGSN 180

Query: 181 NPQTVPPLMNQTKQPMTQTTVAKTSTQGSTSFVSKICCCLGPN 224
           NPQTVPPLMNQTKQPMTQTTVAKTSTQGSTSFVSKICCCLGPN
Sbjct: 181 NPQTVPPLMNQTKQPMTQTTVAKTSTQGSTSFVSKICCCLGPN 223

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BLAST of MELO3C021706.2 vs. NCBI nr
Match: XP_011660296.1 (PREDICTED: RPM1-interacting protein 4-like [Cucumis sativus] >KGN66824.1 hypothetical protein Csa_1G699040 [Cucumis sativus])

HSP 1 Score: 404.4 bits (1038), Expect = 2.4e-109
Identity = 199/222 (89.64%), Postives = 210/222 (94.59%), Query Frame = 0


Query: 1   MAGTKSSSHVPKFGNWDSDDVPYTIFFENARELQAAGVTFDPNDPDTYPPAVFANQNSIP 60
           MAG KSSSHVPKFGNWDSDDVPYTI+FENARELQAAG+TFDPNDPDTYPP   ANQNS P
Sbjct: 1   MAGPKSSSHVPKFGNWDSDDVPYTIYFENARELQAAGITFDPNDPDTYPPTAVANQNSSP 60

Query: 61  ADHHRHHDGEDSHQRREIVNSGSEKLSSERSDSDYALLKAKQSGRKKKNSNGAEGMSRFS 120
           A+HHR+HDG+DSHQRREIVNSGSEKLSSERSDSDYALLKAKQSGRKKKNSNGAEGMSRFS
Sbjct: 61  ANHHRYHDGDDSHQRREIVNSGSEKLSSERSDSDYALLKAKQSGRKKKNSNGAEGMSRFS 120

Query: 121 PTTVDGKGNRNPRVRRNNEGEMMASVPKFGSWDVRDPKSGDGYTAIFNKVKIEKQIGGSN 180
           P TVDGKGNRNPRVRRNNEGEMMASVPKFGSWDVRDPKSGDGYTAIFNKVKIEKQ+GGSN
Sbjct: 121 PATVDGKGNRNPRVRRNNEGEMMASVPKFGSWDVRDPKSGDGYTAIFNKVKIEKQVGGSN 180

Query: 181 NPQTVPPLMNQTKQPMTQTTVAKTSTQGSTSFVSKICCCLGP 223
           + Q+VP LMNQTKQP+TQTTV K+S+ GSTSF SKICCCL P
Sbjct: 181 DTQSVPALMNQTKQPITQTTVGKSSSHGSTSFGSKICCCLYP 222

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BLAST of MELO3C021706.2 vs. NCBI nr
Match: XP_022955116.1 (RPM1-interacting protein 4-like [Cucurbita moschata])

HSP 1 Score: 248.8 bits (634), Expect = 1.7e-62
Identity = 137/220 (62.27%), Postives = 152/220 (69.09%), Query Frame = 0


Query: 1   MAGTKSSSHVPKFGNWDSDDVPYTIFFENARELQAAGVTFDPNDPDTYPPAVFANQNSIP 60
           MAG KSS HVPKFGNWD+DDVPYTI FENAREL+AAG+TFDPNDPDTYPP VF       
Sbjct: 1   MAGAKSSFHVPKFGNWDTDDVPYTICFENARELRAAGITFDPNDPDTYPPEVFKPVAHDG 60

Query: 61  ADHHRHHDGEDSHQRREIVNSGSEKLSSERSDSDYALLKAKQSGRKKKNSNGAEGMSRFS 120
            +H R    + + +R  I+NSGSEKLSSERS SDYALL       KK   NG EG+SR +
Sbjct: 61  GEHQRRPRQQPNRERGAIINSGSEKLSSERSGSDYALL-------KKSKENGVEGISRLA 120

Query: 121 PTTVDGKGNRNPRVRRNNEGEMMASVPKFGSWDVRDPKSGDGYTAIFNKVKIEKQIGGSN 180
           P      GN              ASVPKFGSWD RDPKSGDGYTAIFNK+KIEKQI  S 
Sbjct: 121 PAVAGHGGN-------------PASVPKFGSWDARDPKSGDGYTAIFNKMKIEKQIAAS- 180

Query: 181 NPQTVPPLMNQTKQPMTQTTVAKTSTQGSTSFVSKICCCL 221
           NPQ+VPPLMN+TKQP+  T     +T G TSF SKICCCL
Sbjct: 181 NPQSVPPLMNKTKQPIAHT----NTTSGFTSFASKICCCL 195

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BLAST of MELO3C021706.2 vs. NCBI nr
Match: XP_022994302.1 (RPM1-interacting protein 4-like [Cucurbita maxima])

HSP 1 Score: 243.8 bits (621), Expect = 5.5e-61
Identity = 134/220 (60.91%), Postives = 151/220 (68.64%), Query Frame = 0


Query: 1   MAGTKSSSHVPKFGNWDSDDVPYTIFFENARELQAAGVTFDPNDPDTYPPAVFANQNSIP 60
           MAG  SS HVPKFGNWD+DDVPYTI FENAREL+AAG+TFDPNDPDTYPP VF       
Sbjct: 1   MAGANSSIHVPKFGNWDTDDVPYTICFENARELRAAGITFDPNDPDTYPPEVFKPAAHNG 60

Query: 61  ADHHRHHDGEDSHQRREIVNSGSEKLSSERSDSDYALLKAKQSGRKKKNSNGAEGMSRFS 120
            +H R    + + +R  I+NSGSEKLSSERS S+YALL       KK   NG EG+SR +
Sbjct: 61  GEHQRRPRQQPNRERGAIMNSGSEKLSSERSGSNYALL-------KKSKENGVEGISRLA 120

Query: 121 PTTVDGKGNRNPRVRRNNEGEMMASVPKFGSWDVRDPKSGDGYTAIFNKVKIEKQIGGSN 180
           P       N  P         + ASVPKFGSWD +DPKSGDGYTAIFNK+KIEKQI  S 
Sbjct: 121 PAVAGHGVNPKP---------VTASVPKFGSWDAKDPKSGDGYTAIFNKMKIEKQIAAS- 180

Query: 181 NPQTVPPLMNQTKQPMTQTTVAKTSTQGSTSFVSKICCCL 221
           NPQ VPPLMN+TKQP+  T     +T G TSF SKICCCL
Sbjct: 181 NPQAVPPLMNKTKQPIAHT----NTTSGFTSFASKICCCL 199

[Close]

BLAST of MELO3C021706.2 vs. NCBI nr
Match: XP_023525812.1 (RPM1-interacting protein 4-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 243.4 bits (620), Expect = 7.2e-61
Identity = 134/220 (60.91%), Postives = 149/220 (67.73%), Query Frame = 0


Query: 1   MAGTKSSSHVPKFGNWDSDDVPYTIFFENARELQAAGVTFDPNDPDTYPPAVFANQNSIP 60
           MAG  SS HVPKFGNWD+DDVPYTI FENAREL+AAG+ FDPNDPDTYPP VF       
Sbjct: 1   MAGANSSFHVPKFGNWDTDDVPYTICFENARELRAAGINFDPNDPDTYPPEVFKPAAHDG 60

Query: 61  ADHHRHHDGEDSHQRREIVNSGSEKLSSERSDSDYALLKAKQSGRKKKNSNGAEGMSRFS 120
            +H R    + + +R  I+NSGSEKLSSERS SDYALL       KK   NG EG+SR +
Sbjct: 61  GEHQRRPRQQPNRERGAIINSGSEKLSSERSGSDYALL-------KKSKENGVEGISRLA 120

Query: 121 PTTVDGKGNRNPRVRRNNEGEMMASVPKFGSWDVRDPKSGDGYTAIFNKVKIEKQIGGSN 180
           P      GN              ASVPKFGSWD RDPKSGDGYTAIFNK+KIEKQI  S 
Sbjct: 121 PAVAGHGGN-------------PASVPKFGSWDARDPKSGDGYTAIFNKMKIEKQIAAS- 180

Query: 181 NPQTVPPLMNQTKQPMTQTTVAKTSTQGSTSFVSKICCCL 221
           NPQ VPPLMN++KQP+  T     +T G TSF SKICCCL
Sbjct: 181 NPQAVPPLMNKSKQPIAHT----NTTSGFTSFASKICCCL 195

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BLAST of MELO3C021706.2 vs. TAIR10
Match: AT3G25070.1 (RPM1 interacting protein 4)

HSP 1 Score: 89.0 bits (219), Expect = 4.1e-18
Identity = 66/221 (29.86%), Postives = 105/221 (47.51%), Query Frame = 0


Query: 8   SHVPKFGNWDSDD-VPYTIFFENARELQAAG-VTFDPNDPDTYPPAVFANQNSIPADHHR 67
           S+VPKFGNW++++ VPYT +F+ AR+ +A G    +PNDP+    +        P+   +
Sbjct: 4   SNVPKFGNWEAEENVPYTAYFDKARKTRAPGSKIMNPNDPEYNSDSQSQAPPHPPSSRTK 63

Query: 68  HHDGEDSHQRREIVNSGSEKLSSERSDSDYALLKA--KQSGRKKKNSNGAEGMSRFSPTT 127
               +   + RE + S  E    +  D+  +  +A  K+ GR  +N N  +  S     +
Sbjct: 64  PEQVDTVRRSREHMRSREESELKQFGDAGGSSNEAANKRQGRASQN-NSYDNKSPLHKNS 123

Query: 128 VDGKGNRNPR---VRRNNEGEMMASVPKFGSWDVRDPKSGDGYTAIFNKVKIEKQIGGSN 187
            DG G   P+   +R +   E +  VPKFG WD  +P S DGYT IFNKV+ E+  G + 
Sbjct: 124 YDGTGKSRPKPTNLRADESPEKVTVVPKFGDWDENNPSSADGYTHIFNKVREERSSGANV 183

Query: 188 NPQTVPPLMNQTKQPMTQTTVAKTSTQGSTSFVSKICCCLG 222
           +  +  P    ++ P   ++                CCC G
Sbjct: 184 SGSSRTPTHQSSRNPNNTSS----------------CCCFG 207

[Close]

BLAST of MELO3C021706.2 vs. TAIR10
Match: AT5G55850.2 (RPM1-interacting protein 4 (RIN4) family protein)

HSP 1 Score: 51.6 bits (122), Expect = 7.2e-07
Identity = 20/33 (60.61%), Postives = 25/33 (75.76%), Query Frame = 0


Query: 146 VPKFGSWDVRDPKSGDGYTAIFNKVKIEKQIGG 179
           +PKFG WDV DP S +G+T IFNK + EK+ GG
Sbjct: 24  LPKFGEWDVNDPASAEGFTVIFNKARDEKKTGG 56

[Close]

BLAST of MELO3C021706.2 vs. TAIR10
Match: AT2G04410.1 (RPM1-interacting protein 4 (RIN4) family protein)

HSP 1 Score: 50.8 bits (120), Expect = 1.2e-06
Identity = 24/47 (51.06%), Postives = 32/47 (68.09%), Query Frame = 0


Query: 146 VPKFGSWDVRDPKSGDGYTAIFNKVKIEKQIGG-SNNPQTVPPLMNQ 192
           +PKFG WDV DP S +G+T IFNK + EK+ GG S++P    P  N+
Sbjct: 8   LPKFGEWDVNDPSSAEGFTVIFNKARNEKKGGGKSDSPGKDEPGYNK 54

[Close]

BLAST of MELO3C021706.2 vs. TAIR10
Match: AT2G17660.1 (RPM1-interacting protein 4 (RIN4) family protein)

HSP 1 Score: 46.2 bits (108), Expect = 3.0e-05
Identity = 18/36 (50.00%), Postives = 26/36 (72.22%), Query Frame = 0


Query: 145 SVPKFGSWDVRDPKSGDGYTAIFNKVKIEKQIGGSN 181
           ++PKFG WDV DP + DG+T IF+K   +K+ G S+
Sbjct: 9   ALPKFGEWDVNDPATADGFTVIFSKAGEDKKTGRSS 44

[Close]

BLAST of MELO3C021706.2 vs. TAIR10
Match: AT4G35655.1 (RPM1-interacting protein 4 (RIN4) family protein)

HSP 1 Score: 44.7 bits (104), Expect = 8.9e-05
Identity = 17/36 (47.22%), Postives = 26/36 (72.22%), Query Frame = 0


Query: 146 VPKFGSWDVRDPKSGDGYTAIFNKVKIEKQIGGSNN 182
           +PKFG WDV DP + +G+T IF+K   +K+ G S++
Sbjct: 10  LPKFGEWDVNDPATAEGFTVIFSKAGEDKKTGRSSS 45

[Close]

BLAST of MELO3C021706.2 vs. Swiss-Prot
Match: sp|Q8GYN5|RIN4_ARATH (RPM1-interacting protein 4 OS=Arabidopsis thaliana OX=3702 GN=RIN4 PE=1 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 7.4e-17
Identity = 66/221 (29.86%), Postives = 105/221 (47.51%), Query Frame = 0


Query: 8   SHVPKFGNWDSDD-VPYTIFFENARELQAAG-VTFDPNDPDTYPPAVFANQNSIPADHHR 67
           S+VPKFGNW++++ VPYT +F+ AR+ +A G    +PNDP+    +        P+   +
Sbjct: 4   SNVPKFGNWEAEENVPYTAYFDKARKTRAPGSKIMNPNDPEYNSDSQSQAPPHPPSSRTK 63

Query: 68  HHDGEDSHQRREIVNSGSEKLSSERSDSDYALLKA--KQSGRKKKNSNGAEGMSRFSPTT 127
               +   + RE + S  E    +  D+  +  +A  K+ GR  +N N  +  S     +
Sbjct: 64  PEQVDTVRRSREHMRSREESELKQFGDAGGSSNEAANKRQGRASQN-NSYDNKSPLHKNS 123

Query: 128 VDGKGNRNPR---VRRNNEGEMMASVPKFGSWDVRDPKSGDGYTAIFNKVKIEKQIGGSN 187
            DG G   P+   +R +   E +  VPKFG WD  +P S DGYT IFNKV+ E+  G + 
Sbjct: 124 YDGTGKSRPKPTNLRADESPEKVTVVPKFGDWDENNPSSADGYTHIFNKVREERSSGANV 183

Query: 188 NPQTVPPLMNQTKQPMTQTTVAKTSTQGSTSFVSKICCCLG 222
           +  +  P    ++ P   ++                CCC G
Sbjct: 184 SGSSRTPTHQSSRNPNNTSS----------------CCCFG 207

[Close]

BLAST of MELO3C021706.2 vs. Swiss-Prot
Match: sp|O22633|NOI4_ARATH (Protein NOI4 OS=Arabidopsis thaliana OX=3702 GN=NOI4 PE=1 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 1.3e-05
Identity = 20/33 (60.61%), Postives = 25/33 (75.76%), Query Frame = 0


Query: 146 VPKFGSWDVRDPKSGDGYTAIFNKVKIEKQIGG 179
           +PKFG WDV DP S +G+T IFNK + EK+ GG
Sbjct: 8   LPKFGEWDVNDPASAEGFTVIFNKARDEKKTGG 40

[Close]

BLAST of MELO3C021706.2 vs. Swiss-Prot
Match: sp|Q8S3M3|NOIL_ELAOL (NOI-like protein OS=Elaeis oleifera OX=80265 PE=2 SV=1)

HSP 1 Score: 46.2 bits (108), Expect = 5.5e-04
Identity = 50/218 (22.94%), Postives = 83/218 (38.07%), Query Frame = 0


Query: 8   SHVPKFGNWDSDDVPYTIFFENA-RELQAAGVTFDPNDPDTYPPAVF------------A 67
           +HVPKFGNWD +++ YT +FE   R+       F+PNDP+  P A +             
Sbjct: 5   AHVPKFGNWDGENISYTTYFETVHRDKGDGSKIFNPNDPEENPQAFYPRTVAQDHQHSEK 64

Query: 68  NQNSIPADHH------------------------RHHDGE------DSHQRREIVNSGSE 127
           + N    D+H                        R H         DSH+ R    S + 
Sbjct: 65  HHNDTSTDYHVVXXXXXXXXXXXXXXXXXXXEAPRPHRSPFQGVDMDSHRSRNHGTSATM 124

Query: 128 KLSSERSDSDYALLKAKQSGRKKKNSNGAEGMSRFSPTTVDGKGNRNPRVRRNNEGEMMA 180
             S +R+  ++     +    ++ N + AEG S    TT      ++ ++ R       +
Sbjct: 125 SSSVKRNSDNWL---PQHQHHRRTNKDLAEGKSWLFTTTTASSYTKSRKLSRECSSTTQS 184

[Close]

BLAST of MELO3C021706.2 vs. TrEMBL
Match: tr|A0A1S3C9P5|A0A1S3C9P5_CUCME (RPM1-interacting protein 4-like OS=Cucumis melo OX=3656 GN=LOC103498234 PE=4 SV=1)

HSP 1 Score: 450.7 bits (1158), Expect = 2.0e-123
Identity = 223/223 (100.00%), Postives = 223/223 (100.00%), Query Frame = 0


Query: 1   MAGTKSSSHVPKFGNWDSDDVPYTIFFENARELQAAGVTFDPNDPDTYPPAVFANQNSIP 60
           MAGTKSSSHVPKFGNWDSDDVPYTIFFENARELQAAGVTFDPNDPDTYPPAVFANQNSIP
Sbjct: 1   MAGTKSSSHVPKFGNWDSDDVPYTIFFENARELQAAGVTFDPNDPDTYPPAVFANQNSIP 60

Query: 61  ADHHRHHDGEDSHQRREIVNSGSEKLSSERSDSDYALLKAKQSGRKKKNSNGAEGMSRFS 120
           ADHHRHHDGEDSHQRREIVNSGSEKLSSERSDSDYALLKAKQSGRKKKNSNGAEGMSRFS
Sbjct: 61  ADHHRHHDGEDSHQRREIVNSGSEKLSSERSDSDYALLKAKQSGRKKKNSNGAEGMSRFS 120

Query: 121 PTTVDGKGNRNPRVRRNNEGEMMASVPKFGSWDVRDPKSGDGYTAIFNKVKIEKQIGGSN 180
           PTTVDGKGNRNPRVRRNNEGEMMASVPKFGSWDVRDPKSGDGYTAIFNKVKIEKQIGGSN
Sbjct: 121 PTTVDGKGNRNPRVRRNNEGEMMASVPKFGSWDVRDPKSGDGYTAIFNKVKIEKQIGGSN 180

Query: 181 NPQTVPPLMNQTKQPMTQTTVAKTSTQGSTSFVSKICCCLGPN 224
           NPQTVPPLMNQTKQPMTQTTVAKTSTQGSTSFVSKICCCLGPN
Sbjct: 181 NPQTVPPLMNQTKQPMTQTTVAKTSTQGSTSFVSKICCCLGPN 223

[Close]

BLAST of MELO3C021706.2 vs. TrEMBL
Match: tr|A0A0A0M0M0|A0A0A0M0M0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G699040 PE=4 SV=1)

HSP 1 Score: 404.4 bits (1038), Expect = 1.6e-109
Identity = 199/222 (89.64%), Postives = 210/222 (94.59%), Query Frame = 0


Query: 1   MAGTKSSSHVPKFGNWDSDDVPYTIFFENARELQAAGVTFDPNDPDTYPPAVFANQNSIP 60
           MAG KSSSHVPKFGNWDSDDVPYTI+FENARELQAAG+TFDPNDPDTYPP   ANQNS P
Sbjct: 1   MAGPKSSSHVPKFGNWDSDDVPYTIYFENARELQAAGITFDPNDPDTYPPTAVANQNSSP 60

Query: 61  ADHHRHHDGEDSHQRREIVNSGSEKLSSERSDSDYALLKAKQSGRKKKNSNGAEGMSRFS 120
           A+HHR+HDG+DSHQRREIVNSGSEKLSSERSDSDYALLKAKQSGRKKKNSNGAEGMSRFS
Sbjct: 61  ANHHRYHDGDDSHQRREIVNSGSEKLSSERSDSDYALLKAKQSGRKKKNSNGAEGMSRFS 120

Query: 121 PTTVDGKGNRNPRVRRNNEGEMMASVPKFGSWDVRDPKSGDGYTAIFNKVKIEKQIGGSN 180
           P TVDGKGNRNPRVRRNNEGEMMASVPKFGSWDVRDPKSGDGYTAIFNKVKIEKQ+GGSN
Sbjct: 121 PATVDGKGNRNPRVRRNNEGEMMASVPKFGSWDVRDPKSGDGYTAIFNKVKIEKQVGGSN 180

Query: 181 NPQTVPPLMNQTKQPMTQTTVAKTSTQGSTSFVSKICCCLGP 223
           + Q+VP LMNQTKQP+TQTTV K+S+ GSTSF SKICCCL P
Sbjct: 181 DTQSVPALMNQTKQPITQTTVGKSSSHGSTSFGSKICCCLYP 222

[Close]

BLAST of MELO3C021706.2 vs. TrEMBL
Match: tr|A0A061GGZ7|A0A061GGZ7_THECC (RPM1 interacting protein 4, putative OS=Theobroma cacao OX=3641 GN=TCM_030331 PE=4 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 7.6e-27
Identity = 94/258 (36.43%), Postives = 127/258 (49.22%), Query Frame = 0


Query: 1   MAGTKSSSHVPKFGNWDSDDVPYTIFFENARELQAAGVTFDPNDPDTYP----------- 60
           M+  +  SHVPKFG+WD+D++PYT +FENAR+ + AG+  +PNDP+  P           
Sbjct: 68  MSHVQLRSHVPKFGDWDNDNLPYTAYFENARK-ERAGIRMNPNDPEENPEAFMYTGGGLE 127

Query: 61  ----------PAVFANQNSIPADHHRHHDGEDSHQRREIVN---------------SGSE 120
                     P    +Q SIPAD + H+DG   H R+   N               S + 
Sbjct: 128 SNCDCQPVQVPPAAGSQKSIPADKN-HNDG---HSRQNAPNRNGSYDYQKSVRSHRSMAS 187

Query: 121 KLSSERSDSDYALLKAKQSGRKKKNSNGAEGMSRFSPTTVDGKGNRNPRVR--RNNEGEM 180
           +  SE+S+SD++LL+            G  G S FS +      +RN   +   N +   
Sbjct: 188 ESGSEKSNSDHSLLRFSHRRANSGQKKGRVGGSSFSSSVSGQFTHRNGSYQSDNNRQHRR 247

Query: 181 MASVPKFGSWDVRDPKSGDGYTAIFNKVKIEKQIGGSNNPQTVPPLMNQTKQPMTQTTVA 221
            AS+PKFG WD  DP SG+GYTAIFN+VK EKQ   S  P TVPP  +            
Sbjct: 248 TASIPKFGEWDETDPTSGEGYTAIFNQVKAEKQSPTSKFP-TVPPQQSNYSD-------C 307

[Close]

BLAST of MELO3C021706.2 vs. TrEMBL
Match: tr|A0A2N9EMN9|A0A2N9EMN9_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS3974 PE=4 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 2.5e-25
Identity = 96/245 (39.18%), Postives = 131/245 (53.47%), Query Frame = 0


Query: 8   SHVPKFGNWDSD-DVPYTIFFENARELQAAGVTFDPNDPDTYPPA--VFANQNSIPADHH 67
           SHVPKFGNWD+D ++PYTI+F+NAR+   +GV  +PNDP+  P A       + I AD++
Sbjct: 8   SHVPKFGNWDNDNNIPYTIYFDNARK-DKSGVKMNPNDPEENPEAFMFMTGGSEINADNY 67

Query: 68  -------------------RHH-DGEDSHQRREIVNSGSE-----KLSSERSDSDYALLK 127
                              +HH +G   H   +   SGS      +  S++S SD+ L++
Sbjct: 68  HAFQSPPHVNSSKPISSVEKHHIEGHTRHHHADQQKSGSHQSITFESGSDKSYSDFTLVQ 127

Query: 128 AK----QSGRKKKNSNGAEGMSRFSPTTVDGKGNRNPRVRRNNEGEMMASVPKFGSWDVR 187
                 +S  KKK+   AEG + FS  ++ G  NR+            AS+PKFG WD  
Sbjct: 128 PSPRRVRSDHKKKSL--AEGSNSFS-QSIPGITNRSGSYPSAYNHHRAASIPKFGDWDET 187

Query: 188 DPKSGDGYTAIFNKVKIEKQIGGSNNPQTVPPLMNQTKQPMTQTTVAKTSTQGSTSFVSK 221
           DPKSG+G++ IFNKVK EKQI  S+ P  VPP      QP   ++  K   QG +S  SK
Sbjct: 188 DPKSGEGFSVIFNKVKEEKQIASSHFP-NVPP------QPSYYSSAKK---QGRSSSRSK 238

[Close]

BLAST of MELO3C021706.2 vs. TrEMBL
Match: tr|A0A2P4HLR4|A0A2P4HLR4_QUESU (Rpm1-interacting protein 4 OS=Quercus suber OX=58331 GN=CFP56_01872 PE=4 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 1.2e-24
Identity = 90/250 (36.00%), Postives = 130/250 (52.00%), Query Frame = 0


Query: 7   SSHVPKFGNWDSDDVPYTIFFENARELQAAGVTFDPNDPDTYPPA--VFANQNSIPADHH 66
           +SHVPKFG+WD+D++PYT +F+NAR+ + + V  +PNDP+  P A       + I ADHH
Sbjct: 4   NSHVPKFGSWDNDNIPYTAYFDNARK-EKSSVKMNPNDPEENPEAFMYMTGGSEINADHH 63

Query: 67  ------------------RH----HDGEDSHQRREI-------VNSGSEKLSSERSDSDY 126
                             +H    H    +HQR  +         S + +  S++S+SD+
Sbjct: 64  AFQDPLHVNSNKSNSSVGKHRIEGHARHHAHQRNTVKQPKIRSQKSITSESGSDKSNSDH 123

Query: 127 ALLKA--KQSGRKKKNSNGAEGMSRFS---PTTVDGKGNRNPRVRRNNEGEMMASVPKFG 186
           +++K   ++ G   K  + AEG + FS   P     +   +P V  ++     ASVPKFG
Sbjct: 124 SIMKPNHRRVGSDHKKKSLAEGSNTFSLSIPGHARKRSGSHPSVETHHRA---ASVPKFG 183

Query: 187 SWDVRDPKSGDGYTAIFNKVKIEKQIGGSNNPQTVPPLMNQTKQPMTQTTVAKTSTQGST 221
           +WD  DP+SG+G+TAIFNKVK EKQI  S  P   P       QP    +  +    G +
Sbjct: 184 AWDELDPESGEGFTAIFNKVKEEKQIASSQLPNVSP-------QPSYYPSAQR---HGRS 239

The following BLAST results are available for this feature:

BLAST of MELO3C021706.2 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008458983.1	3.0e-123	100.00	PREDICTED: RPM1-interacting protein 4-like [Cucumis melo]	[more]
XP_011660296.1	2.4e-109	89.64	PREDICTED: RPM1-interacting protein 4-like [Cucumis sativus] >KGN66824.1 hypothe...	[more]
XP_022955116.1	1.7e-62	62.27	RPM1-interacting protein 4-like [Cucurbita moschata]	[more]
XP_022994302.1	5.5e-61	60.91	RPM1-interacting protein 4-like [Cucurbita maxima]	[more]
XP_023525812.1	7.2e-61	60.91	RPM1-interacting protein 4-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of MELO3C021706.2 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G25070.1	4.1e-18	29.86	RPM1 interacting protein 4	[more]
AT5G55850.2	7.2e-07	60.61	RPM1-interacting protein 4 (RIN4) family protein	[more]
AT2G04410.1	1.2e-06	51.06	RPM1-interacting protein 4 (RIN4) family protein	[more]
AT2G17660.1	3.0e-05	50.00	RPM1-interacting protein 4 (RIN4) family protein	[more]
AT4G35655.1	8.9e-05	47.22	RPM1-interacting protein 4 (RIN4) family protein	[more]

BLAST of MELO3C021706.2 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q8GYN5\|RIN4_ARATH	7.4e-17	29.86	RPM1-interacting protein 4 OS=Arabidopsis thaliana OX=3702 GN=RIN4 PE=1 SV=1	[more]
sp\|O22633\|NOI4_ARATH	1.3e-05	60.61	Protein NOI4 OS=Arabidopsis thaliana OX=3702 GN=NOI4 PE=1 SV=1	[more]
sp\|Q8S3M3\|NOIL_ELAOL	5.5e-04	22.94	NOI-like protein OS=Elaeis oleifera OX=80265 PE=2 SV=1	[more]

BLAST of MELO3C021706.2 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3C9P5\|A0A1S3C9P5_CUCME	2.0e-123	100.00	RPM1-interacting protein 4-like OS=Cucumis melo OX=3656 GN=LOC103498234 PE=4 SV=...	[more]
tr\|A0A0A0M0M0\|A0A0A0M0M0_CUCSA	1.6e-109	89.64	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G699040 PE=4 SV=1	[more]
tr\|A0A061GGZ7\|A0A061GGZ7_THECC	7.6e-27	36.43	RPM1 interacting protein 4, putative OS=Theobroma cacao OX=3641 GN=TCM_030331 PE...	[more]
tr\|A0A2N9EMN9\|A0A2N9EMN9_FAGSY	2.5e-25	39.18	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS3974 PE=4 SV=1	[more]
tr\|A0A2P4HLR4\|A0A2P4HLR4_QUESU	1.2e-24	36.00	Rpm1-interacting protein 4 OS=Quercus suber OX=58331 GN=CFP56_01872 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR008700	TypeIII_avirulence_cleave

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006952	defense response
biological_process	GO:0009626	plant-type hypersensitive response
biological_process	GO:0008150	biological_process
biological_process	GO:0010204	defense response signaling pathway, resistance gene-independent
biological_process	GO:0006468	protein phosphorylation
biological_process	GO:0002237	response to molecule of bacterial origin
biological_process	GO:0034051	negative regulation of plant-type hypersensitive response
biological_process	GO:0045087	innate immune response
biological_process	GO:0002376	immune system process
biological_process	GO:0009816	defense response to bacterium, incompatible interaction
cellular_component	GO:0012505	endomembrane system
cellular_component	GO:0019897	extrinsic component of plasma membrane
cellular_component	GO:0016020	membrane
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C021706.2.1	MELO3C021706.2.1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008700	RIN4, pathogenic type III effector avirulence factor Avr cleavage site	PFAM	PF05627	AvrRpt-cleavage	coord: 144..175 e-value: 3.6E-15 score: 54.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 37..140
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 60..112
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 113..127
None	No IPR available	PANTHER	PTHR33159	FAMILY NOT NAMED	coord: 7..221
None	No IPR available	PANTHER	PTHR33159:SF8	SUBFAMILY NOT NAMED	coord: 7..221

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C021706.2	Csa1G699040	Cucumber (Chinese Long) v2	cumedB012
MELO3C021706.2	CSPI01G33990	Wild cucumber (PI 183967)	cpimedB013
MELO3C021706.2	Cucsa.332480	Cucumber (Gy14) v1	cgymedB544
MELO3C021706.2	CmaCh18G005850	Cucurbita maxima (Rimu)	cmamedB416
MELO3C021706.2	CmoCh18G005620	Cucurbita moschata (Rifu)	cmomedB409
MELO3C021706.2	Lsi02G010850	Bottle gourd (USVL1VR-Ls)	lsimedB190
MELO3C021706.2	Cp4.1LG02g09510	Cucurbita pepo (Zucchini)	cpemedB585
MELO3C021706.2	CsGy1G032510	Cucumber (Gy14) v2	cgybmedB011
MELO3C021706.2	Cla004570	Watermelon (97103) v1	medwmB151
MELO3C021706.2	ClCG01G009910	Watermelon (Charleston Gray)	medwcgB132
MELO3C021706.2	Cla97C01G010030	Watermelon (97103) v2	medwmbB131
MELO3C021706.2	Bhi08G000661	Wax gourd	medwgoB184
MELO3C021706.2	CsaV3_1G045860	Cucumber (Chinese Long) v3	cucmedB011

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C021706.2	Cucurbita maxima (Rimu)	cmamedB213
MELO3C021706.2	Cucurbita maxima (Rimu)	cmamedB423
MELO3C021706.2	Cucurbita moschata (Rifu)	cmomedB201
MELO3C021706.2	Cucurbita pepo (Zucchini)	cpemedB562
MELO3C021706.2	Silver-seed gourd	carmedB0236
MELO3C021706.2	Wax gourd	medwgoB167