Bhi08G000661 (gene) Wax gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Bhi08G000661
Type	gene
Organism	Benincasa hispida (Wax gourd)
Description	RPM1-interacting protein 4-like
Location	chr8 : 25955185 .. 25958028 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAAAACTTTCAACCTCTTTACTCCTTACACCTCCATGTTTCTCACTTCTAACAATACAAACTCTTCCAAATTCCGCCGTTGCCGTTGCCGTTGCCGTCGTCGTTGCCACCGCCGCAGCAACCACCGAGCTGCCACAGCTCATGGCAGTGAGTGTTTTTTTTTTTCTTTCTTTGTTTTTTCATCAACACAAAACCAAAATAAAACTTCAACAATTATCATCTCAAATTAGATCATATCGTGGAATTAATAATTAGATGTAAATTCGTATTAATCTTCAATTAATTAATCTAATGAGCAGGGGGCAAAATCGTCATCTCACGTTCCGAAATTCGGCAATTGGGATTCCGATGACGTACCGTACACCATCTGTTTCGAAAACGCCCGTGAACTCCGAGCCGCCGGCGTCGACTTTGATCCCAATGATCCCGACACGTACCCGCCGGCCGCCGTCATAAATCAAAATTCAACCCCAGCCGACCACCGCGGAGACTACCACCAGCGGCGAGAGATGGGAAACTCGGGATCGGAGAAATTGAGCAGTGAGAGAAGCGGTTCGGATTACGCGCTTCTGAAAGAGGCGAAGCAGAGTGGGAGGAAGAAGAAACATAGTAATGGAGCGGAAGGAATGAGTAGATTTACTCCGACGACGACGGTGAGCGGACACGGCGGAAAGGGTAATCGGAACCCTAGGGTTCGGCGGAATGATGAAGGGGAAATGATGGCGTCGGTGCCGAAATTTGGGAGCTGGGATGTGAGGGATCCGAAATCGGGAGATGGATATACGGCAATTTTCAATAAAGTGAAGATTGAGAAGCAAATTGGAGGCTCTAATAATCCTCAGGCCGTTCCGCCATTGATGAATCAAACCAAGAAATTACCAATTGCTCAAACTACTACCACCGCTACCACTCATGGATCCAATTCATTTGTTTCCAAGGTACTTATTACATTTTGTTTTCTTTCAAATTTCTATTTTTACTTTCATTGGTTTCGGTTGCATGTTTCTTATAACAACCCTTATTAAATATATGGACATTTATTTAAATTTTTGTTTAAAAAGAATAATATTAATAGGTAAAATATTTTATTTAATTATTTTTAAATGTTGATGGATGATTAACGACTCAATTTCAATTATATTATAAAACTTTTATTTTCAAAAGTTTTGAGTAAAATCTAAGAAAACCACGAAATTGAATAAAAATAAATTACATAATTGTATCATAAAAAAAGAGAAAAATACATTTTTTGTTCCTAAATTTTGAATCTAGTTTTTATTTAGTTTTTAGGTTTTAAAATGTTCAAGTTTTGAGTTTGGTTTCAATTTAGTCCTTACCTAAGTTTCAAAATGTTACAATTTTATCTTTGAGATTTGAGTTGTATTTCAATTTGGTCTCTATATTTCAAGATTTTGTATTTTTAACTTCAACTTTCTATTAGATACTCAACTTCTATCATCGATGCTATGTCTCTTAATTAATTTAAAATAATTATGAAGTAAAATTTTAAATTCAAATTTAAATTTGATAAGAAATAGTGAAACTTAAATAATTATAATTATATTGATTATTTTAAATTTAGTAACATACATTAACACTAAAGACGGAAGAATGGTTTTAGGAAAAAATTGAGGTTAAAAGTGTATATTGTGAAATCTAATGACAAAATTGAAACGAAACTCAAATGTGAAAGATAAAAGTTGTAACCTTTTGAAATCTAGGGACTAAATTAAAACTAAATTCAAAACACAAGAGCTAAATGTGTAACATTTTGAAATCTAAGGACCAAATAGAAACTAAATCCAAAACCTAAATACCAAAAAACTATTTTTCTCATAATAATAAGTTCAGGTTAGTTCAGGTGAACCCATGAACCAATTCAATCCATGAACCTTTCATTTATTTAAACCCAACCCAACTCAAACCATACTAATATAGTATGTTTTCAGATTTCCTACCAAATAAGTTCTAAATTTTCAAATATTTGTTTTCATTTTTAAAAATTGACTAGTGTTTCTTAAAATCAGAGTATGAAATTCAAAAGAAAACAAGTTCAAATTGAAAAAAAAAAAAAGAAAAAAGATAAAATAAAATAAAATCGTTAGCAAACATAGTATCGTGTATGAATATTATTGTTAAGATTTAATCGCATATCTTATTTATGTAGATCGTTGAATTTTCGAGACTAATCGTGTTTATTGACTACACAAATCTAAATGGTCACTTTAGAAAAATTGGATATGATATTTTTGAATAAATTGATTCAACTAATATAGTACGTAAAACTCAAATCAAAGACCATATGAAATTCGGATGAAATGATAACATTAGAACTAAAATGAAAAATAGCTACCATTAGATTGATTTTTATTTTTAAGCACTAAAAAAATCAATTAAAATAGTGTTTAAAACTATCATTAAATTTGAAATTGCCCATTTCATTTCAATCCATCAATGTTTTATGAAAAATAAGAAATCTTAATTTTAATGAAAATGTTACATCTTTAGTTTATAAAATTTGTTAAATATTTTGAAAATATAAAATGAGGTTTTTGTATGTTTACAAATGAAAACAAAAAGCAAAATAAACAATAAGCCCTTGAGTCATCGATGATTATGTATGTATATAAAGTTTTTTTTTCTTATTTAATGTATATTAAGTTATGAACTATGAAAATATACGGTTTTTTTAATATTTAAAAAATAGTGAAATAATTATCTATTTATTTATGCAGATATGCTGTTGTTTATGTCCAAAGTAAAGCACATCATCACTCCAAGAGTATCTGGAAGTGTTTTGGTGATTTTCCACCATTTGGTGGTTTTTCCACTTTTAGAAATTTAC

mRNA sequence

CAAAACTTTCAACCTCTTTACTCCTTACACCTCCATGTTTCTCACTTCTAACAATACAAACTCTTCCAAATTCCGCCGTTGCCGTTGCCGTTGCCGTCGTCGTTGCCACCGCCGCAGCAACCACCGAGCTGCCACAGCTCATGGCAGGGGCAAAATCGTCATCTCACGTTCCGAAATTCGGCAATTGGGATTCCGATGACGTACCGTACACCATCTGTTTCGAAAACGCCCGTGAACTCCGAGCCGCCGGCGTCGACTTTGATCCCAATGATCCCGACACGTACCCGCCGGCCGCCGTCATAAATCAAAATTCAACCCCAGCCGACCACCGCGGAGACTACCACCAGCGGCGAGAGATGGGAAACTCGGGATCGGAGAAATTGAGCAGTGAGAGAAGCGGTTCGGATTACGCGCTTCTGAAAGAGGCGAAGCAGAGTGGGAGGAAGAAGAAACATAGTAATGGAGCGGAAGGAATGAGTAGATTTACTCCGACGACGACGGTGAGCGGACACGGCGGAAAGGGTAATCGGAACCCTAGGGTTCGGCGGAATGATGAAGGGGAAATGATGGCGTCGGTGCCGAAATTTGGGAGCTGGGATGTGAGGGATCCGAAATCGGGAGATGGATATACGGCAATTTTCAATAAAGTGAAGATTGAGAAGCAAATTGGAGGCTCTAATAATCCTCAGGCCGTTCCGCCATTGATGAATCAAACCAAGAAATTACCAATTGCTCAAACTACTACCACCGCTACCACTCATGGATCCAATTCATTTGTTTCCAAGATATGCTGTTGTTTATGTCCAAAGTAAAGCACATCATCACTCCAAGAGTATCTGGAAGTGTTTTGGTGATTTTCCACCATTTGGTGGTTTTTCCACTTTTAGAAATTTAC

Coding sequence (CDS)

ATGGCAGGGGCAAAATCGTCATCTCACGTTCCGAAATTCGGCAATTGGGATTCCGATGACGTACCGTACACCATCTGTTTCGAAAACGCCCGTGAACTCCGAGCCGCCGGCGTCGACTTTGATCCCAATGATCCCGACACGTACCCGCCGGCCGCCGTCATAAATCAAAATTCAACCCCAGCCGACCACCGCGGAGACTACCACCAGCGGCGAGAGATGGGAAACTCGGGATCGGAGAAATTGAGCAGTGAGAGAAGCGGTTCGGATTACGCGCTTCTGAAAGAGGCGAAGCAGAGTGGGAGGAAGAAGAAACATAGTAATGGAGCGGAAGGAATGAGTAGATTTACTCCGACGACGACGGTGAGCGGACACGGCGGAAAGGGTAATCGGAACCCTAGGGTTCGGCGGAATGATGAAGGGGAAATGATGGCGTCGGTGCCGAAATTTGGGAGCTGGGATGTGAGGGATCCGAAATCGGGAGATGGATATACGGCAATTTTCAATAAAGTGAAGATTGAGAAGCAAATTGGAGGCTCTAATAATCCTCAGGCCGTTCCGCCATTGATGAATCAAACCAAGAAATTACCAATTGCTCAAACTACTACCACCGCTACCACTCATGGATCCAATTCATTTGTTTCCAAGATATGCTGTTGTTTATGTCCAAAGTAA

Protein sequence

MAGAKSSSHVPKFGNWDSDDVPYTICFENARELRAAGVDFDPNDPDTYPPAAVINQNSTPADHRGDYHQRREMGNSGSEKLSSERSGSDYALLKEAKQSGRKKKHSNGAEGMSRFTPTTTVSGHGGKGNRNPRVRRNDEGEMMASVPKFGSWDVRDPKSGDGYTAIFNKVKIEKQIGGSNNPQAVPPLMNQTKKLPIAQTTTTATTHGSNSFVSKICCCLCPK

Homology

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BLAST of Bhi08G000661 vs. Swiss-Prot
Match: sp|Q8GYN5|RIN4_ARATH (RPM1-interacting protein 4 OS=Arabidopsis thaliana OX=3702 GN=RIN4 PE=1 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 5.3e-15
Identity = 65/233 (27.90%), Postives = 103/233 (44.21%), Query Frame = 0


Query: 8   SHVPKFGNWDSDD-VPYTICFENARELRAAGVD-FDPNDPD----------TYPPAAVIN 67
           S+VPKFGNW++++ VPYT  F+ AR+ RA G    +PNDP+           +PP++   
Sbjct: 4   SNVPKFGNWEAEENVPYTAYFDKARKTRAPGSKIMNPNDPEYNSDSQSQAPPHPPSSRTK 63

Query: 68  QNSTPADHRGDYHQR-------REMGNSG--SEKLSSERSGSDYALLKEAKQSGRKKKHS 127
                   R   H R       ++ G++G  S + +++R G      +      +   H 
Sbjct: 64  PEQVDTVRRSREHMRSREESELKQFGDAGGSSNEAANKRQG---RASQNNSYDNKSPLHK 123

Query: 128 NGAEGMSRFTPTTTVSGHGGKGNRNPRVRRNDEGEMMASVPKFGSWDVRDPKSGDGYTAI 187
           N  +G  +  P  T             +R ++  E +  VPKFG WD  +P S DGYT I
Sbjct: 124 NSYDGTGKSRPKPT------------NLRADESPEKVTVVPKFGDWDENNPSSADGYTHI 183

Query: 188 FNKVKIEKQIGGSNNPQAVPPLMNQTKKLPIAQTTTTATTHGSNSFVSKICCC 220
           FNKV+ E+  G +         ++ + + P  Q++       S       CCC
Sbjct: 184 FNKVREERSSGAN---------VSGSSRTPTHQSSRNPNNTSS-------CCC 205

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BLAST of Bhi08G000661 vs. Swiss-Prot
Match: sp|O22633|NOI4_ARATH (Protein NOI4 OS=Arabidopsis thaliana OX=3702 GN=NOI4 PE=1 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 1.3e-05
Identity = 20/33 (60.61%), Postives = 25/33 (75.76%), Query Frame = 0


Query: 146 VPKFGSWDVRDPKSGDGYTAIFNKVKIEKQIGG 179
           +PKFG WDV DP S +G+T IFNK + EK+ GG
Sbjct: 8   LPKFGEWDVNDPASAEGFTVIFNKARDEKKTGG 40

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BLAST of Bhi08G000661 vs. TAIR10
Match: AT3G25070.1 (RPM1 interacting protein 4)

HSP 1 Score: 82.8 bits (203), Expect = 2.9e-16
Identity = 65/233 (27.90%), Postives = 103/233 (44.21%), Query Frame = 0


Query: 8   SHVPKFGNWDSDD-VPYTICFENARELRAAGVD-FDPNDPD----------TYPPAAVIN 67
           S+VPKFGNW++++ VPYT  F+ AR+ RA G    +PNDP+           +PP++   
Sbjct: 4   SNVPKFGNWEAEENVPYTAYFDKARKTRAPGSKIMNPNDPEYNSDSQSQAPPHPPSSRTK 63

Query: 68  QNSTPADHRGDYHQR-------REMGNSG--SEKLSSERSGSDYALLKEAKQSGRKKKHS 127
                   R   H R       ++ G++G  S + +++R G      +      +   H 
Sbjct: 64  PEQVDTVRRSREHMRSREESELKQFGDAGGSSNEAANKRQG---RASQNNSYDNKSPLHK 123

Query: 128 NGAEGMSRFTPTTTVSGHGGKGNRNPRVRRNDEGEMMASVPKFGSWDVRDPKSGDGYTAI 187
           N  +G  +  P  T             +R ++  E +  VPKFG WD  +P S DGYT I
Sbjct: 124 NSYDGTGKSRPKPT------------NLRADESPEKVTVVPKFGDWDENNPSSADGYTHI 183

Query: 188 FNKVKIEKQIGGSNNPQAVPPLMNQTKKLPIAQTTTTATTHGSNSFVSKICCC 220
           FNKV+ E+  G +         ++ + + P  Q++       S       CCC
Sbjct: 184 FNKVREERSSGAN---------VSGSSRTPTHQSSRNPNNTSS-------CCC 205

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BLAST of Bhi08G000661 vs. TAIR10
Match: AT5G55850.2 (RPM1-interacting protein 4 (RIN4) family protein)

HSP 1 Score: 51.6 bits (122), Expect = 7.2e-07
Identity = 20/33 (60.61%), Postives = 25/33 (75.76%), Query Frame = 0


Query: 146 VPKFGSWDVRDPKSGDGYTAIFNKVKIEKQIGG 179
           +PKFG WDV DP S +G+T IFNK + EK+ GG
Sbjct: 24  LPKFGEWDVNDPASAEGFTVIFNKARDEKKTGG 56

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BLAST of Bhi08G000661 vs. TAIR10
Match: AT2G04410.1 (RPM1-interacting protein 4 (RIN4) family protein)

HSP 1 Score: 51.2 bits (121), Expect = 9.5e-07
Identity = 24/47 (51.06%), Postives = 32/47 (68.09%), Query Frame = 0


Query: 146 VPKFGSWDVRDPKSGDGYTAIFNKVKIEKQIGG-SNNPQAVPPLMNQ 192
           +PKFG WDV DP S +G+T IFNK + EK+ GG S++P    P  N+
Sbjct: 8   LPKFGEWDVNDPSSAEGFTVIFNKARNEKKGGGKSDSPGKDEPGYNK 54

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BLAST of Bhi08G000661 vs. TAIR10
Match: AT2G17660.1 (RPM1-interacting protein 4 (RIN4) family protein)

HSP 1 Score: 46.6 bits (109), Expect = 2.3e-05
Identity = 18/36 (50.00%), Postives = 26/36 (72.22%), Query Frame = 0


Query: 145 SVPKFGSWDVRDPKSGDGYTAIFNKVKIEKQIGGSN 181
           ++PKFG WDV DP + DG+T IF+K   +K+ G S+
Sbjct: 9   ALPKFGEWDVNDPATADGFTVIFSKAGEDKKTGRSS 44

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BLAST of Bhi08G000661 vs. TAIR10
Match: AT4G35655.1 (RPM1-interacting protein 4 (RIN4) family protein)

HSP 1 Score: 44.7 bits (104), Expect = 8.9e-05
Identity = 17/36 (47.22%), Postives = 26/36 (72.22%), Query Frame = 0


Query: 146 VPKFGSWDVRDPKSGDGYTAIFNKVKIEKQIGGSNN 182
           +PKFG WDV DP + +G+T IF+K   +K+ G S++
Sbjct: 10  LPKFGEWDVNDPATAEGFTVIFSKAGEDKKTGRSSS 45

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BLAST of Bhi08G000661 vs. TrEMBL
Match: tr|A0A1S3C9P5|A0A1S3C9P5_CUCME (RPM1-interacting protein 4-like OS=Cucumis melo OX=3656 GN=LOC103498234 PE=4 SV=1)

HSP 1 Score: 350.9 bits (899), Expect = 2.1e-93
Identity = 187/228 (82.02%), Postives = 194/228 (85.09%), Query Frame = 0


Query: 1   MAGAKSSSHVPKFGNWDSDDVPYTICFENARELRAAGVDFDPNDPDTYPPAAVINQNSTP 60
           MAG KSSSHVPKFGNWDSDDVPYTI FENAREL+AAGV FDPNDPDTYPPA   NQNS P
Sbjct: 1   MAGTKSSSHVPKFGNWDSDDVPYTIFFENARELQAAGVTFDPNDPDTYPPAVFANQNSIP 60

Query: 61  ADHR-----GDYHQRREMGNSGSEKLSSERSGSDYALLKEAKQSGRKKKHSNGAEGMSRF 120
           ADH       D HQRRE+ NSGSEKLSSERS SDYALLK AKQSGRKKK+SNGAEGMSRF
Sbjct: 61  ADHHRHHDGEDSHQRREIVNSGSEKLSSERSDSDYALLK-AKQSGRKKKNSNGAEGMSRF 120

Query: 121 TPTTTVSGHGGKGNRNPRVRRNDEGEMMASVPKFGSWDVRDPKSGDGYTAIFNKVKIEKQ 180
           +PTT      GKGNRNPRVRRN+EGEMMASVPKFGSWDVRDPKSGDGYTAIFNKVKIEKQ
Sbjct: 121 SPTTV----DGKGNRNPRVRRNNEGEMMASVPKFGSWDVRDPKSGDGYTAIFNKVKIEKQ 180

Query: 181 IGGSNNPQAVPPLMNQTKKLPIAQTTTTAT-THGSNSFVSKICCCLCP 223
           IGGSNNPQ VPPLMNQTK+ P+ QTT   T T GS SFVSKICCCL P
Sbjct: 181 IGGSNNPQTVPPLMNQTKQ-PMTQTTVAKTSTQGSTSFVSKICCCLGP 222

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BLAST of Bhi08G000661 vs. TrEMBL
Match: tr|A0A0A0M0M0|A0A0A0M0M0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G699040 PE=4 SV=1)

HSP 1 Score: 342.8 bits (878), Expect = 5.7e-91
Identity = 181/229 (79.04%), Postives = 196/229 (85.59%), Query Frame = 0


Query: 1   MAGAKSSSHVPKFGNWDSDDVPYTICFENARELRAAGVDFDPNDPDTYPPAAVINQNSTP 60
           MAG KSSSHVPKFGNWDSDDVPYTI FENAREL+AAG+ FDPNDPDTYPP AV NQNS+P
Sbjct: 1   MAGPKSSSHVPKFGNWDSDDVPYTIYFENARELQAAGITFDPNDPDTYPPTAVANQNSSP 60

Query: 61  ADHR-----GDYHQRREMGNSGSEKLSSERSGSDYALLKEAKQSGRKKKHSNGAEGMSRF 120
           A+H       D HQRRE+ NSGSEKLSSERS SDYALLK AKQSGRKKK+SNGAEGMSRF
Sbjct: 61  ANHHRYHDGDDSHQRREIVNSGSEKLSSERSDSDYALLK-AKQSGRKKKNSNGAEGMSRF 120

Query: 121 TPTTTVSGHGGKGNRNPRVRRNDEGEMMASVPKFGSWDVRDPKSGDGYTAIFNKVKIEKQ 180
           +P T      GKGNRNPRVRRN+EGEMMASVPKFGSWDVRDPKSGDGYTAIFNKVKIEKQ
Sbjct: 121 SPATV----DGKGNRNPRVRRNNEGEMMASVPKFGSWDVRDPKSGDGYTAIFNKVKIEKQ 180

Query: 181 IGGSNNPQAVPPLMNQTKKLPIAQTTT-TATTHGSNSFVSKICCCLCPK 224
           +GGSN+ Q+VP LMNQTK+ PI QTT   +++HGS SF SKICCCL PK
Sbjct: 181 VGGSNDTQSVPALMNQTKQ-PITQTTVGKSSSHGSTSFGSKICCCLYPK 223

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BLAST of Bhi08G000661 vs. TrEMBL
Match: tr|A0A061GGZ7|A0A061GGZ7_THECC (RPM1 interacting protein 4, putative OS=Theobroma cacao OX=3641 GN=TCM_030331 PE=4 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 8.4e-26
Identity = 97/260 (37.31%), Postives = 130/260 (50.00%), Query Frame = 0


Query: 1   MAGAKSSSHVPKFGNWDSDDVPYTICFENARELRAAGVDFDPNDPDTYP----------- 60
           M+  +  SHVPKFG+WD+D++PYT  FENAR+ R AG+  +PNDP+  P           
Sbjct: 68  MSHVQLRSHVPKFGDWDNDNLPYTAYFENARKER-AGIRMNPNDPEENPEAFMYTGGGLE 127

Query: 61  ----------PAAVINQNSTPAD-HRGDYHQRREMGN---------------SGSEKLSS 120
                     P A  +Q S PAD +  D H R+   N               S + +  S
Sbjct: 128 SNCDCQPVQVPPAAGSQKSIPADKNHNDGHSRQNAPNRNGSYDYQKSVRSHRSMASESGS 187

Query: 121 ERSGSDYALLK---EAKQSGRKKKHSNGAEGMSRFTPTTTVSGHGGKGNRNPRVRRNDEG 180
           E+S SD++LL+       SG+KK    G  G S F  +++VSG     N + +   N + 
Sbjct: 188 EKSNSDHSLLRFSHRRANSGQKK----GRVGGSSF--SSSVSGQFTHRNGSYQSDNNRQH 247

Query: 181 EMMASVPKFGSWDVRDPKSGDGYTAIFNKVKIEKQIGGSNNPQAVPPLMNQTKKLPIAQT 221
              AS+PKFG WD  DP SG+GYTAIFN+VK EKQ   S  P  VPP  +       ++ 
Sbjct: 248 RRTASIPKFGEWDETDPTSGEGYTAIFNQVKAEKQSPTSKFP-TVPPQQSNYSDCYHSKP 307

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BLAST of Bhi08G000661 vs. TrEMBL
Match: tr|A0A2P4HLR4|A0A2P4HLR4_QUESU (Rpm1-interacting protein 4 OS=Quercus suber OX=58331 GN=CFP56_01872 PE=4 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 1.2e-24
Identity = 90/252 (35.71%), Postives = 126/252 (50.00%), Query Frame = 0


Query: 7   SSHVPKFGNWDSDDVPYTICFENARELRAAGVDFDPNDPDTYPPAAVI------------ 66
           +SHVPKFG+WD+D++PYT  F+NAR+ +++ V  +PNDP+  P A +             
Sbjct: 4   NSHVPKFGSWDNDNIPYTAYFDNARKEKSS-VKMNPNDPEENPEAFMYMTGGSEINADHH 63

Query: 67  -----------NQNSTPADHRGDYHQRREMGNSGSEK-------------LSSERSGSDY 126
                        NS+   HR + H R       + K               S++S SD+
Sbjct: 64  AFQDPLHVNSNKSNSSVGKHRIEGHARHHAHQRNTVKQPKIRSQKSITSESGSDKSNSDH 123

Query: 127 ALLK-EAKQSGRKKKHSNGAEGMSRFTPTTTVSGHGGK-GNRNPRVRRNDEGEMMASVPK 186
           +++K   ++ G   K  + AEG + F  + ++ GH  K    +P V  +      ASVPK
Sbjct: 124 SIMKPNHRRVGSDHKKKSLAEGSNTF--SLSIPGHARKRSGSHPSVETHHRA---ASVPK 183

Query: 187 FGSWDVRDPKSGDGYTAIFNKVKIEKQIGGSNNPQAVPPLMNQTKKLPIAQTTTTATTHG 221
           FG+WD  DP+SG+G+TAIFNKVK EKQI  S  P   P    Q    P AQ       HG
Sbjct: 184 FGAWDELDPESGEGFTAIFNKVKEEKQIASSQLPNVSP----QPSYYPSAQ------RHG 239

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BLAST of Bhi08G000661 vs. TrEMBL
Match: tr|A0A2R6RB61|A0A2R6RB61_ACTCH (RPM1-interacting protein OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc09713 PE=4 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 6.0e-24
Identity = 82/216 (37.96%), Postives = 109/216 (50.46%), Query Frame = 0


Query: 8   SHVPKFGNWDSDDVPYTICFENARELRAAGVDFDPNDPDTYPPAAVINQNSTPAD-HRGD 67
           SHVPKFG+WDSD++PYT  FENAR+ + +GV  +PNDP+  P A +  +  T ++ HR +
Sbjct: 8   SHVPKFGSWDSDNIPYTAYFENARKEKGSGVMMNPNDPEENPEAFMFGRVGTGSECHRRN 67

Query: 68  Y--HQRREMGNSGSEKLSSERSGSDYALLKEAKQSGRKKKHSNGAEGMSRFTPTTTVSGH 127
              HQ+     S +         S YAL ++  +  R     N     + F   +     
Sbjct: 68  TSDHQKSGSHKSTNSXXXXXXXNSGYALQQQNHRRTRSTTRKNSTTEANNFVRPSPAHDR 127

Query: 128 GGKGNRNPRVRRNDEGEMMASVPKFGSWDVRDPKSGDGYTAIFNKVKIEKQIGGSNNPQA 187
               N NP     D+     SVPKFG WD +DPKSG+G+T IFNKVK EKQI  +  P  
Sbjct: 128 LRSAN-NP---SEDKSYRSVSVPKFGVWDEKDPKSGEGFTVIFNKVKEEKQIAATKLP-T 187

Query: 188 VPPLMNQTKKLPIAQTTTTATTHGSNSFVSKICCCL 221
           VPP     +K        +   H      SKICCCL
Sbjct: 188 VPPQPRNFEK--------SQKKHAG----SKICCCL 206

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BLAST of Bhi08G000661 vs. NCBI nr
Match: XP_008458983.1 (PREDICTED: RPM1-interacting protein 4-like [Cucumis melo])

HSP 1 Score: 350.9 bits (899), Expect = 3.2e-93
Identity = 187/228 (82.02%), Postives = 194/228 (85.09%), Query Frame = 0


Query: 1   MAGAKSSSHVPKFGNWDSDDVPYTICFENARELRAAGVDFDPNDPDTYPPAAVINQNSTP 60
           MAG KSSSHVPKFGNWDSDDVPYTI FENAREL+AAGV FDPNDPDTYPPA   NQNS P
Sbjct: 1   MAGTKSSSHVPKFGNWDSDDVPYTIFFENARELQAAGVTFDPNDPDTYPPAVFANQNSIP 60

Query: 61  ADHR-----GDYHQRREMGNSGSEKLSSERSGSDYALLKEAKQSGRKKKHSNGAEGMSRF 120
           ADH       D HQRRE+ NSGSEKLSSERS SDYALLK AKQSGRKKK+SNGAEGMSRF
Sbjct: 61  ADHHRHHDGEDSHQRREIVNSGSEKLSSERSDSDYALLK-AKQSGRKKKNSNGAEGMSRF 120

Query: 121 TPTTTVSGHGGKGNRNPRVRRNDEGEMMASVPKFGSWDVRDPKSGDGYTAIFNKVKIEKQ 180
           +PTT      GKGNRNPRVRRN+EGEMMASVPKFGSWDVRDPKSGDGYTAIFNKVKIEKQ
Sbjct: 121 SPTTV----DGKGNRNPRVRRNNEGEMMASVPKFGSWDVRDPKSGDGYTAIFNKVKIEKQ 180

Query: 181 IGGSNNPQAVPPLMNQTKKLPIAQTTTTAT-THGSNSFVSKICCCLCP 223
           IGGSNNPQ VPPLMNQTK+ P+ QTT   T T GS SFVSKICCCL P
Sbjct: 181 IGGSNNPQTVPPLMNQTKQ-PMTQTTVAKTSTQGSTSFVSKICCCLGP 222

[Close]

BLAST of Bhi08G000661 vs. NCBI nr
Match: XP_011660296.1 (PREDICTED: RPM1-interacting protein 4-like [Cucumis sativus] >KGN66824.1 hypothetical protein Csa_1G699040 [Cucumis sativus])

HSP 1 Score: 342.8 bits (878), Expect = 8.7e-91
Identity = 181/229 (79.04%), Postives = 196/229 (85.59%), Query Frame = 0


Query: 1   MAGAKSSSHVPKFGNWDSDDVPYTICFENARELRAAGVDFDPNDPDTYPPAAVINQNSTP 60
           MAG KSSSHVPKFGNWDSDDVPYTI FENAREL+AAG+ FDPNDPDTYPP AV NQNS+P
Sbjct: 1   MAGPKSSSHVPKFGNWDSDDVPYTIYFENARELQAAGITFDPNDPDTYPPTAVANQNSSP 60

Query: 61  ADHR-----GDYHQRREMGNSGSEKLSSERSGSDYALLKEAKQSGRKKKHSNGAEGMSRF 120
           A+H       D HQRRE+ NSGSEKLSSERS SDYALLK AKQSGRKKK+SNGAEGMSRF
Sbjct: 61  ANHHRYHDGDDSHQRREIVNSGSEKLSSERSDSDYALLK-AKQSGRKKKNSNGAEGMSRF 120

Query: 121 TPTTTVSGHGGKGNRNPRVRRNDEGEMMASVPKFGSWDVRDPKSGDGYTAIFNKVKIEKQ 180
           +P T      GKGNRNPRVRRN+EGEMMASVPKFGSWDVRDPKSGDGYTAIFNKVKIEKQ
Sbjct: 121 SPATV----DGKGNRNPRVRRNNEGEMMASVPKFGSWDVRDPKSGDGYTAIFNKVKIEKQ 180

Query: 181 IGGSNNPQAVPPLMNQTKKLPIAQTTT-TATTHGSNSFVSKICCCLCPK 224
           +GGSN+ Q+VP LMNQTK+ PI QTT   +++HGS SF SKICCCL PK
Sbjct: 181 VGGSNDTQSVPALMNQTKQ-PITQTTVGKSSSHGSTSFGSKICCCLYPK 223

[Close]

BLAST of Bhi08G000661 vs. NCBI nr
Match: XP_022142617.1 (RPM1-interacting protein 4-like [Momordica charantia])

HSP 1 Score: 258.8 bits (660), Expect = 1.6e-65
Identity = 144/230 (62.61%), Postives = 158/230 (68.70%), Query Frame = 0


Query: 4   AKSSSHVPKFGNWDSDDVPYTICFENARELRAAGVDFDPNDPDTYPPAA--VINQNSTPA 63
           AKSSSHVPKFGNWD+DDVPYTICFENA ELRAAGV FDPNDPDTYPP A    N  S P+
Sbjct: 3   AKSSSHVPKFGNWDTDDVPYTICFENAGELRAAGVTFDPNDPDTYPPEAFPAANHRSNPS 62

Query: 64  D--------HRGDYHQRREMGNSGSEKLSSERSGSDYALLKEAKQSGRKKKHSNGAEGMS 123
           D                        EKLSSERSGSDY+LLKE    GR+KK +NG +G+S
Sbjct: 63  DXXXXXXXXXXXXXXXXXXXXXXXXEKLSSERSGSDYSLLKE--PGGRRKKINNGVDGIS 122

Query: 124 RFTPTTTVSGHGGKGNRNPRVRRNDEGEMMASVPKFGSWDVRDPKSGDGYTAIFNKVKIE 183
           RF P  T +GH               GEM+ASVPKFGSWD RDPKSGDGYTAIFNKVK+E
Sbjct: 123 RFPP--TAAGH-XXXXXXXXXXXXXXGEMVASVPKFGSWDARDPKSGDGYTAIFNKVKME 182

Query: 184 KQIGGSNNPQAVPPLMNQTKKLPIAQTTTTATTHGSNSFVSKICCCLCPK 224
           K+IGGSN+ QAVPPL NQTK+ PI Q       HGS SFVSK+CCCLCPK
Sbjct: 183 KKIGGSNSSQAVPPLTNQTKQQPIPQ-----IVHGSTSFVSKVCCCLCPK 222

[Close]

BLAST of Bhi08G000661 vs. NCBI nr
Match: XP_022955116.1 (RPM1-interacting protein 4-like [Cucurbita moschata])

HSP 1 Score: 254.6 bits (649), Expect = 3.1e-64
Identity = 150/233 (64.38%), Postives = 162/233 (69.53%), Query Frame = 0


Query: 1   MAGAKSSSHVPKFGNWDSDDVPYTICFENARELRAAGVDFDPNDPDTYPPAAVINQNSTP 60
           MAGAKSS HVPKFGNWD+DDVPYTICFENARELRAAG+ FDPNDPDTYPP         P
Sbjct: 1   MAGAKSSFHVPKFGNWDTDDVPYTICFENARELRAAGITFDPNDPDTYPPEVF-----KP 60

Query: 61  ADHRGDYHQR-------REMG---NSGSEKLSSERSGSDYALLKEAKQSGRKKKHSNGAE 120
             H G  HQR       RE G   NSGSEKLSSERSGSDYALLK++K+        NG E
Sbjct: 61  VAHDGGEHQRRPRQQPNRERGAIINSGSEKLSSERSGSDYALLKKSKE--------NGVE 120

Query: 121 GMSRFTPTTTVSGHGGKGNRNPRVRRNDEGEMMASVPKFGSWDVRDPKSGDGYTAIFNKV 180
           G+SR  P   V+GHGG    NP           ASVPKFGSWD RDPKSGDGYTAIFNK+
Sbjct: 121 GISRLAP--AVAGHGG----NP-----------ASVPKFGSWDARDPKSGDGYTAIFNKM 180

Query: 181 KIEKQIGGSNNPQAVPPLMNQTKKLPIAQTTTTATTHGSNSFVSKICCCLCPK 224
           KIEKQI  S NPQ+VPPLMN+TK+ PIA T TT+   G  SF SKICCCL  K
Sbjct: 181 KIEKQIAAS-NPQSVPPLMNKTKQ-PIAHTNTTS---GFTSFASKICCCLRTK 198

[Close]

BLAST of Bhi08G000661 vs. NCBI nr
Match: XP_023525812.1 (RPM1-interacting protein 4-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 254.6 bits (649), Expect = 3.1e-64
Identity = 150/233 (64.38%), Postives = 163/233 (69.96%), Query Frame = 0


Query: 1   MAGAKSSSHVPKFGNWDSDDVPYTICFENARELRAAGVDFDPNDPDTYPPAAVINQNSTP 60
           MAGA SS HVPKFGNWD+DDVPYTICFENARELRAAG++FDPNDPDTYPP         P
Sbjct: 1   MAGANSSFHVPKFGNWDTDDVPYTICFENARELRAAGINFDPNDPDTYPPEVF-----KP 60

Query: 61  ADHRGDYHQR-------REMG---NSGSEKLSSERSGSDYALLKEAKQSGRKKKHSNGAE 120
           A H G  HQR       RE G   NSGSEKLSSERSGSDYALLK++K+        NG E
Sbjct: 61  AAHDGGEHQRRPRQQPNRERGAIINSGSEKLSSERSGSDYALLKKSKE--------NGVE 120

Query: 121 GMSRFTPTTTVSGHGGKGNRNPRVRRNDEGEMMASVPKFGSWDVRDPKSGDGYTAIFNKV 180
           G+SR  P   V+GHGG    NP           ASVPKFGSWD RDPKSGDGYTAIFNK+
Sbjct: 121 GISRLAP--AVAGHGG----NP-----------ASVPKFGSWDARDPKSGDGYTAIFNKM 180

Query: 181 KIEKQIGGSNNPQAVPPLMNQTKKLPIAQTTTTATTHGSNSFVSKICCCLCPK 224
           KIEKQI  S NPQAVPPLMN++K+ PIA T TT+   G  SF SKICCCL  K
Sbjct: 181 KIEKQIAAS-NPQAVPPLMNKSKQ-PIAHTNTTS---GFTSFASKICCCLRTK 198

The following BLAST results are available for this feature:

BLAST of Bhi08G000661 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q8GYN5\|RIN4_ARATH	5.3e-15	27.90	RPM1-interacting protein 4 OS=Arabidopsis thaliana OX=3702 GN=RIN4 PE=1 SV=1	[more]
sp\|O22633\|NOI4_ARATH	1.3e-05	60.61	Protein NOI4 OS=Arabidopsis thaliana OX=3702 GN=NOI4 PE=1 SV=1	[more]

BLAST of Bhi08G000661 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G25070.1	2.9e-16	27.90	RPM1 interacting protein 4	[more]
AT5G55850.2	7.2e-07	60.61	RPM1-interacting protein 4 (RIN4) family protein	[more]
AT2G04410.1	9.5e-07	51.06	RPM1-interacting protein 4 (RIN4) family protein	[more]
AT2G17660.1	2.3e-05	50.00	RPM1-interacting protein 4 (RIN4) family protein	[more]
AT4G35655.1	8.9e-05	47.22	RPM1-interacting protein 4 (RIN4) family protein	[more]

BLAST of Bhi08G000661 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3C9P5\|A0A1S3C9P5_CUCME	2.1e-93	82.02	RPM1-interacting protein 4-like OS=Cucumis melo OX=3656 GN=LOC103498234 PE=4 SV=...	[more]
tr\|A0A0A0M0M0\|A0A0A0M0M0_CUCSA	5.7e-91	79.04	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G699040 PE=4 SV=1	[more]
tr\|A0A061GGZ7\|A0A061GGZ7_THECC	8.4e-26	37.31	RPM1 interacting protein 4, putative OS=Theobroma cacao OX=3641 GN=TCM_030331 PE...	[more]
tr\|A0A2P4HLR4\|A0A2P4HLR4_QUESU	1.2e-24	35.71	Rpm1-interacting protein 4 OS=Quercus suber OX=58331 GN=CFP56_01872 PE=4 SV=1	[more]
tr\|A0A2R6RB61\|A0A2R6RB61_ACTCH	6.0e-24	37.96	RPM1-interacting protein OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY...	[more]

BLAST of Bhi08G000661 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008458983.1	3.2e-93	82.02	PREDICTED: RPM1-interacting protein 4-like [Cucumis melo]	[more]
XP_011660296.1	8.7e-91	79.04	PREDICTED: RPM1-interacting protein 4-like [Cucumis sativus] >KGN66824.1 hypothe...	[more]
XP_022142617.1	1.6e-65	62.61	RPM1-interacting protein 4-like [Momordica charantia]	[more]
XP_022955116.1	3.1e-64	64.38	RPM1-interacting protein 4-like [Cucurbita moschata]	[more]
XP_023525812.1	3.1e-64	64.38	RPM1-interacting protein 4-like [Cucurbita pepo subsp. pepo]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR008700	TypeIII_avirulence_cleave

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010204	defense response signaling pathway, resistance gene-independent
biological_process	GO:0002376	immune system process
biological_process	GO:0002237	response to molecule of bacterial origin
biological_process	GO:0006468	protein phosphorylation
biological_process	GO:0009626	plant-type hypersensitive response
biological_process	GO:0034051	negative regulation of plant-type hypersensitive response
biological_process	GO:0045087	innate immune response
biological_process	GO:0009816	defense response to bacterium, incompatible interaction
biological_process	GO:0006952	defense response
biological_process	GO:0008150	biological_process
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0012505	endomembrane system
cellular_component	GO:0019897	extrinsic component of plasma membrane
cellular_component	GO:0016020	membrane
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0005515	protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi08M000661	Bhi08M000661	mRNA

InterPro

Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008700	RIN4, pathogenic type III effector avirulence factor Avr cleavage site	PFAM	PF05627	AvrRpt-cleavage	coord: 144..175 e-value: 3.6E-15 score: 54.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 37..135
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 63..78
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 111..126
None	No IPR available	PANTHER	PTHR33159	FAMILY NOT NAMED	coord: 7..220
None	No IPR available	PANTHER	PTHR33159:SF8	SUBFAMILY NOT NAMED	coord: 7..220

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Bhi08G000661	MELO3C021706	Melon (DHL92) v3.5.1	mewgoB180
Bhi08G000661	ClCG01G009910	Watermelon (Charleston Gray)	wcgwgoB233
Bhi08G000661	CSPI01G33990	Wild cucumber (PI 183967)	cpiwgoB066
Bhi08G000661	Cucsa.332480	Cucumber (Gy14) v1	cgywgoB668
Bhi08G000661	CmaCh18G005850	Cucurbita maxima (Rimu)	cmawgoB0535
Bhi08G000661	CmoCh18G005620	Cucurbita moschata (Rifu)	cmowgoB0523
Bhi08G000661	Lsi02G010850	Bottle gourd (USVL1VR-Ls)	lsiwgoB245
Bhi08G000661	Cp4.1LG02g09510	Cucurbita pepo (Zucchini)	cpewgoB0710
Bhi08G000661	CsGy1G032510	Cucumber (Gy14) v2	cgybwgoB063
Bhi08G000661	MELO3C021706.2	Melon (DHL92) v3.6.1	medwgoB184
Bhi08G000661	CsaV3_1G045860	Cucumber (Chinese Long) v3	cucwgoB069
Bhi08G000661	Cla97C01G010030	Watermelon (97103) v2	wgowmbB452

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Bhi08G000661	Cucumber (Gy14) v2	cgybwgoB032
Bhi08G000661	Cucumber (Gy14) v2	cgybwgoB042
Bhi08G000661	Cucumber (Gy14) v2	cgybwgoB607
Bhi08G000661	Cucurbita maxima (Rimu)	cmawgoB0276
Bhi08G000661	Cucurbita moschata (Rifu)	cmowgoB0271
Bhi08G000661	Cucurbita pepo (Zucchini)	cpewgoB0641
Bhi08G000661	Wild cucumber (PI 183967)	cpiwgoB036
Bhi08G000661	Cucumber (Chinese Long) v3	cucwgoB039
Bhi08G000661	Cucumber (Chinese Long) v2	cuwgoB036
Bhi08G000661	Silver-seed gourd	carwgoB1216