MELO3C021706 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C021706
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionRPM1-interacting 4-like protein
Locationchr12 : 15857424 .. 15858263 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAGTGAGTGTGTTTTCTTGTTCTTATTTGTTTCTCTTCTTCTTTTTCCAGCAACGTAAAAACCAAAACAAAACCCAACTGCGTAAATGATATCGTGGACGTGGAATTATTAATTAGAAGTAAGTTTGTGCTAATCTTCAATTAATTTAATGTAATGGGCAGGGGACAAAGTCGTCATCTCACGTTCCGAAATTCGGTAATTGGGATTCCGATGACGTGCCGTACACCATCTTTTTCGAAAACGCCCGTGAACTCCAAGCCGCCGGCGTCACTTTCGATCCCAACGATCCCGACACCTACCCGCCGGCCGTCTTCGCAAACCAAAATTCAATCCCAGCCGACCACCACCGTCATCACGATGGCGAAGACTCCCACCAGCGCCGCGAGATTGTAAACTCCGGATCGGAGAAATTGAGCAGTGAGAGAAGCGATTCGGATTACGCGCTTCTGAAGGCGAAACAGAGTGGGAGGAAGAAGAAAAATAGCAATGGAGCGGAAGGAATGAGTAGATTTTCTCCGACGACGGTGGACGGAAAGGGTAATCGGAACCCTAGGGTTCGGCGGAATAATGAGGGGGAAATGATGGCATCGGTGCCGAAATTTGGGAGCTGGGATGTGAGGGATCCGAAATCGGGAGATGGTTATACGGCGATATTCAATAAAGTGAAGATAGAGAAGCAAATTGGAGGTTCTAATAATCCTCAGACCGTTCCGCCATTGATGAATCAAACCAAGCAACCAATGACTCAAACTACTGTTGCTAAAACTTCTACTCAAGGATCCACTTCATTTGTTTCCAAGGTACCTCCTCTTTTTTCTTTTTCATGTTTCTATTAA

mRNA sequence

ATGGCAGGGACAAAGTCGTCATCTCACGTTCCGAAATTCGGTAATTGGGATTCCGATGACGTGCCGTACACCATCTTTTTCGAAAACGCCCGTGAACTCCAAGCCGCCGGCGTCACTTTCGATCCCAACGATCCCGACACCTACCCGCCGGCCGTCTTCGCAAACCAAAATTCAATCCCAGCCGACCACCACCGTCATCACGATGGCGAAGACTCCCACCAGCGCCGCGAGATTGTAAACTCCGGATCGGAGAAATTGAGCAGTGAGAGAAGCGATTCGGATTACGCGCTTCTGAAGGCGAAACAGAGTGGGAGGAAGAAGAAAAATAGCAATGGAGCGGAAGGAATGAGTAGATTTTCTCCGACGACGGTGGACGGAAAGGGTAATCGGAACCCTAGGGTTCGGCGGAATAATGAGGGGGAAATGATGGCATCGGTGCCGAAATTTGGGAGCTGGGATGTGAGGGATCCGAAATCGGGAGATGGTTATACGGCGATATTCAATAAAGTGAAGATAGAGAAGCAAATTGGAGGTTCTAATAATCCTCAGACCGTTCCGCCATTGATGAATCAAACCAAGCAACCAATGACTCAAACTACTGTTGCTAAAACTTCTACTCAAGGATCCACTTCATTTGTTTCCAAGGTACCTCCTCTTTTTTCTTTTTCATGTTTCTATTAA

Coding sequence (CDS)

ATGGCAGGGACAAAGTCGTCATCTCACGTTCCGAAATTCGGTAATTGGGATTCCGATGACGTGCCGTACACCATCTTTTTCGAAAACGCCCGTGAACTCCAAGCCGCCGGCGTCACTTTCGATCCCAACGATCCCGACACCTACCCGCCGGCCGTCTTCGCAAACCAAAATTCAATCCCAGCCGACCACCACCGTCATCACGATGGCGAAGACTCCCACCAGCGCCGCGAGATTGTAAACTCCGGATCGGAGAAATTGAGCAGTGAGAGAAGCGATTCGGATTACGCGCTTCTGAAGGCGAAACAGAGTGGGAGGAAGAAGAAAAATAGCAATGGAGCGGAAGGAATGAGTAGATTTTCTCCGACGACGGTGGACGGAAAGGGTAATCGGAACCCTAGGGTTCGGCGGAATAATGAGGGGGAAATGATGGCATCGGTGCCGAAATTTGGGAGCTGGGATGTGAGGGATCCGAAATCGGGAGATGGTTATACGGCGATATTCAATAAAGTGAAGATAGAGAAGCAAATTGGAGGTTCTAATAATCCTCAGACCGTTCCGCCATTGATGAATCAAACCAAGCAACCAATGACTCAAACTACTGTTGCTAAAACTTCTACTCAAGGATCCACTTCATTTGTTTCCAAGGTACCTCCTCTTTTTTCTTTTTCATGTTTCTATTAA

Protein sequence

MAGTKSSSHVPKFGNWDSDDVPYTIFFENARELQAAGVTFDPNDPDTYPPAVFANQNSIPADHHRHHDGEDSHQRREIVNSGSEKLSSERSDSDYALLKAKQSGRKKKNSNGAEGMSRFSPTTVDGKGNRNPRVRRNNEGEMMASVPKFGSWDVRDPKSGDGYTAIFNKVKIEKQIGGSNNPQTVPPLMNQTKQPMTQTTVAKTSTQGSTSFVSKVPPLFSFSCFY*
Homology
[Close]
BLAST of MELO3C021706 vs. Swiss-Prot
Match: RIN4_ARATH (RPM1-interacting protein 4 OS=Arabidopsis thaliana GN=RIN4 PE=1 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 3.2e-20
Identity = 62/195 (31.79%), Postives = 97/195 (49.74%), Query Frame = 1 

Query: 8   SHVPKFGNWDSDD-VPYTIFFENARELQAAGVTF-DPNDPDTYPPAVFANQNSIPADHHR 67
           S+VPKFGNW++++ VPYT +F+ AR+ +A G    +PNDP+    +        P+   +
Sbjct: 4   SNVPKFGNWEAEENVPYTAYFDKARKTRAPGSKIMNPNDPEYNSDSQSQAPPHPPSSRTK 63

Query: 68  HHDGEDSHQRREIVNSGSEKLSSERSDSDYALLKA--KQSGRKKKNSNGAEGMSRFSPTT 127
               +   + RE + S  E    +  D+  +  +A  K+ GR  +N N  +  S     +
Sbjct: 64  PEQVDTVRRSREHMRSREESELKQFGDAGGSSNEAANKRQGRASQN-NSYDNKSPLHKNS 123

Query: 128 VDGKGNRNPR---VRRNNEGEMMASVPKFGSWDVRDPKSGDGYTAIFNKVKIEKQIGGSN 187
            DG G   P+   +R +   E +  VPKFG WD  +P S DGYT IFNKV+ E+  G + 
Sbjct: 124 YDGTGKSRPKPTNLRADESPEKVTVVPKFGDWDENNPSSADGYTHIFNKVREERSSGANV 183

Query: 188 NPQTVPPLMNQTKQP 196
           +  +  P    ++ P
Sbjct: 184 SGSSRTPTHQSSRNP 197

[Close]
BLAST of MELO3C021706 vs. Swiss-Prot
Match: NOIL_ELAOL (NOI-like protein OS=Elaeis oleifera PE=2 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 2.0e-06
Identity = 28/83 (33.73%), Postives = 37/83 (44.58%), Query Frame = 1 

Query: 8  SHVPKFGNWDSDDVPYTIFFENA-RELQAAGVTFDPNDPDTYPPAVF------------A 67
          +HVPKFGNWD +++ YT +FE   R+       F+PNDP+  P A +             
Sbjct: 5  AHVPKFGNWDGENISYTTYFETVHRDKGDGSKIFNPNDPEENPQAFYPRTVAQDHQHSEK 64

Query: 68 NQNSIPADHHRHHDGEDSHQRRE 78
          + N    D+H        H RRE
Sbjct: 65 HHNDTSTDYHVVKQHRRKHHRRE 87

[Close]
BLAST of MELO3C021706 vs. TrEMBL
Match: A0A0A0M0M0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G699040 PE=4 SV=1)

HSP 1 Score: 404.4 bits (1038), Expect = 8.9e-110
Identity = 193/216 (89.35%), Postives = 205/216 (94.91%), Query Frame = 1 

Query: 1   MAGTKSSSHVPKFGNWDSDDVPYTIFFENARELQAAGVTFDPNDPDTYPPAVFANQNSIP 60
           MAG KSSSHVPKFGNWDSDDVPYTI+FENARELQAAG+TFDPNDPDTYPP   ANQNS P
Sbjct: 1   MAGPKSSSHVPKFGNWDSDDVPYTIYFENARELQAAGITFDPNDPDTYPPTAVANQNSSP 60

Query: 61  ADHHRHHDGEDSHQRREIVNSGSEKLSSERSDSDYALLKAKQSGRKKKNSNGAEGMSRFS 120
           A+HHR+HDG+DSHQRREIVNSGSEKLSSERSDSDYALLKAKQSGRKKKNSNGAEGMSRFS
Sbjct: 61  ANHHRYHDGDDSHQRREIVNSGSEKLSSERSDSDYALLKAKQSGRKKKNSNGAEGMSRFS 120

Query: 121 PTTVDGKGNRNPRVRRNNEGEMMASVPKFGSWDVRDPKSGDGYTAIFNKVKIEKQIGGSN 180
           P TVDGKGNRNPRVRRNNEGEMMASVPKFGSWDVRDPKSGDGYTAIFNKVKIEKQ+GGSN
Sbjct: 121 PATVDGKGNRNPRVRRNNEGEMMASVPKFGSWDVRDPKSGDGYTAIFNKVKIEKQVGGSN 180

Query: 181 NPQTVPPLMNQTKQPMTQTTVAKTSTQGSTSFVSKV 217
           + Q+VP LMNQTKQP+TQTTV K+S+ GSTSF SK+
Sbjct: 181 DTQSVPALMNQTKQPITQTTVGKSSSHGSTSFGSKI 216

[Close]
BLAST of MELO3C021706 vs. TrEMBL
Match: A0A061GGZ7_THECC (RPM1 interacting protein 4, putative OS=Theobroma cacao GN=TCM_030331 PE=4 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 1.4e-27
Identity = 85/225 (37.78%), Postives = 116/225 (51.56%), Query Frame = 1 

Query: 1   MAGTKSSSHVPKFGNWDSDDVPYTIFFENARELQAAGVTFDPNDPDTYP----------- 60
           M+  +  SHVPKFG+WD+D++PYT +FENAR+ + AG+  +PNDP+  P           
Sbjct: 68  MSHVQLRSHVPKFGDWDNDNLPYTAYFENARK-ERAGIRMNPNDPEENPEAFMYTGGGLE 127

Query: 61  ----------PAVFANQNSIPADHHRHHDGEDSHQRREIVN---------------SGSE 120
                     P    +Q SIPAD + H+DG   H R+   N               S + 
Sbjct: 128 SNCDCQPVQVPPAAGSQKSIPADKN-HNDG---HSRQNAPNRNGSYDYQKSVRSHRSMAS 187

Query: 121 KLSSERSDSDYALLKAKQSGRKKKNSNGAEGMSRFSPTTVDGKGNRNPRVRRNNEGE--M 180
           +  SE+S+SD++LL+            G  G S FS +      +RN   + +N  +   
Sbjct: 188 ESGSEKSNSDHSLLRFSHRRANSGQKKGRVGGSSFSSSVSGQFTHRNGSYQSDNNRQHRR 247

Query: 181 MASVPKFGSWDVRDPKSGDGYTAIFNKVKIEKQIGGSNNPQTVPP 188
            AS+PKFG WD  DP SG+GYTAIFN+VK EKQ   S  P TVPP
Sbjct: 248 TASIPKFGEWDETDPTSGEGYTAIFNQVKAEKQSPTSKFP-TVPP 286

[Close]
BLAST of MELO3C021706 vs. TrEMBL
Match: A0A0B0Q117_GOSAR (RPM1-interacting 4-like protein OS=Gossypium arboreum GN=F383_15209 PE=4 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 7.2e-27
Identity = 80/206 (38.83%), Postives = 109/206 (52.91%), Query Frame = 1 

Query: 8   SHVPKFGNWDSDDVPYTIFFENARELQAAGVTFDPNDPDTYPPAVFANQN---------S 67
           SHVPKFG+WD+ D+PYT +FENAR+ + AG+  +PNDP+  P A    +          S
Sbjct: 9   SHVPKFGDWDNGDLPYTTYFENARK-EKAGIRMNPNDPEENPEAFMYTRGGPESNYDGRS 68

Query: 68  IPADHHRHH------DGEDSHQRREIVNSGSEKLSSERSD-SDYALLKAKQSGRKKKNSN 127
           +P    +HH      DG     ++         L SE +  SD ++L +    R     N
Sbjct: 69  VPVTADKHHRNAANKDGSSYDHQKSARRQRDTALESENNTGSDRSILHSSHRRRNSGQKN 128

Query: 128 GAEGMSRFSPTTVDGKGNRNPRVRRN-NEGEMMASVPKFGSWDVRDPKSGDGYTAIFNKV 187
              G S FS  +V G+  RN   + + N+    ASVPKFG WD  DP SG+G+T IFN++
Sbjct: 129 SRPGGSAFS-ASVSGQSQRNGNHQLDGNKHHRTASVPKFGEWDETDPTSGEGFTVIFNQL 188

Query: 188 KIEKQIGGSNNPQTVPP---LMNQTK 194
           K EKQ   S+N QTV P    MN +K
Sbjct: 189 KEEKQAPPSSNYQTVAPKVKTMNYSK 212

[Close]
BLAST of MELO3C021706 vs. TrEMBL
Match: A0A0D2SV69_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_010G185300 PE=4 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 1.2e-26
Identity = 81/213 (38.03%), Postives = 113/213 (53.05%), Query Frame = 1 

Query: 1   MAGTKSSSHVPKFGNWDSDDVPYTIFFENARELQAAGVTFDPNDPDTYPPAVFANQN--- 60
           M+  K  SHVPKFG+WD+ D+PYT +FENAR+ + AG+  +PNDP+  P A+   +    
Sbjct: 1   MSEAKLRSHVPKFGDWDNGDLPYTTYFENARK-EKAGIRMNPNDPEENPEALMYTRGGPE 60

Query: 61  ------SIPADHHRHH------DGEDSHQRREIVNSGSEKLSSERSD-SDYALLKAKQSG 120
                 S+P    +HH      DG     ++      +  L SE +  SD ++L +    
Sbjct: 61  SNYDGRSVPVTADKHHQNAANKDGSSYDHQKSARRQRNTALESENNTGSDRSILPSNHRR 120

Query: 121 RKKKNSNGAEGMSRFSPTTVDGKGNRNPRVRRN-NEGEMMASVPKFGSWDVRDPKSGDGY 180
           R     NG  G S FS  +V G+  R    + + N+     SVPKFG WD  DP SG+G+
Sbjct: 121 RNSGQKNGRPGGSAFS-ASVSGQSQRTGNHQLDGNKHHRTPSVPKFGEWDETDPTSGEGF 180

Query: 181 TAIFNKVKIEKQIGGSNNPQTVPP---LMNQTK 194
           T IFN++K EKQ   S+N QTV P    MN +K
Sbjct: 181 TVIFNRLK-EKQAAPSSNYQTVAPEVKTMNYSK 210

[Close]
BLAST of MELO3C021706 vs. TrEMBL
Match: B9RXE0_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0902970 PE=4 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 2.1e-26
Identity = 90/237 (37.97%), Postives = 127/237 (53.59%), Query Frame = 1 

Query: 8   SHVPKFGNWDSDDVPYTIFFENARELQAAGVTFDPNDPDTYPPAVFANQNSIPADHHR-- 67
           SHVPKFGNW++D+VPYT FF+NAR+ +  GV  +PNDP   P A F +++ +     R  
Sbjct: 16  SHVPKFGNWENDNVPYTAFFDNARK-EKGGVMINPNDPQENPEA-FMHESEVELSFGRVR 75

Query: 68  -HHDGEDSHQ----RREIVNSGSEKLSS-----------ERSDSDYALLKAKQSGRKKKN 127
            +   E+ +Q    +RE   S  +K SS           +RS SDY+LL+A     +KK 
Sbjct: 76  LNSVCEEKNQMGGIKREPSESDQQKSSSHNKSMTSECGSDRSSSDYSLLQAAYRRDRKKG 135

Query: 128 SNGAEGMSRFSPTTVDGKGNRNPRVRR----NNEGEM---MASVPKFGSWDVRDPKSGDG 187
             G E ++ ++ T      ++N R RR    +NEG+     ASVPKFG+WD  DP SG+G
Sbjct: 136 VAGGEEIN-YNNTLSTSAVSQNSRQRRGSHPSNEGQQHQRTASVPKFGAWDEADPTSGEG 195

Query: 188 YTAIFNKVKIEKQIGGSNNPQTVPPLMNQTKQPMTQTTVAKTSTQGST--SFVSKVP 218
           +T IFN+VK EKQ   +  P   P +  Q     T    +K +  G    +F S VP
Sbjct: 196 FTVIFNRVKEEKQAASAAFP--FPTIPQQPSPTSTSPPPSKANEWGGLEGAFRSTVP 247

[Close]
BLAST of MELO3C021706 vs. TAIR10
Match: AT3G25070.1 (AT3G25070.1 RPM1 interacting protein 4)

HSP 1 Score: 100.1 bits (248), Expect = 1.8e-21
Identity = 62/195 (31.79%), Postives = 97/195 (49.74%), Query Frame = 1 

Query: 8   SHVPKFGNWDSDD-VPYTIFFENARELQAAGVTF-DPNDPDTYPPAVFANQNSIPADHHR 67
           S+VPKFGNW++++ VPYT +F+ AR+ +A G    +PNDP+    +        P+   +
Sbjct: 4   SNVPKFGNWEAEENVPYTAYFDKARKTRAPGSKIMNPNDPEYNSDSQSQAPPHPPSSRTK 63

Query: 68  HHDGEDSHQRREIVNSGSEKLSSERSDSDYALLKA--KQSGRKKKNSNGAEGMSRFSPTT 127
               +   + RE + S  E    +  D+  +  +A  K+ GR  +N N  +  S     +
Sbjct: 64  PEQVDTVRRSREHMRSREESELKQFGDAGGSSNEAANKRQGRASQN-NSYDNKSPLHKNS 123

Query: 128 VDGKGNRNPR---VRRNNEGEMMASVPKFGSWDVRDPKSGDGYTAIFNKVKIEKQIGGSN 187
            DG G   P+   +R +   E +  VPKFG WD  +P S DGYT IFNKV+ E+  G + 
Sbjct: 124 YDGTGKSRPKPTNLRADESPEKVTVVPKFGDWDENNPSSADGYTHIFNKVREERSSGANV 183

Query: 188 NPQTVPPLMNQTKQP 196
           +  +  P    ++ P
Sbjct: 184 SGSSRTPTHQSSRNP 197

[Close]
BLAST of MELO3C021706 vs. TAIR10
Match: AT2G04410.1 (AT2G04410.1 RPM1-interacting protein 4 (RIN4) family protein)

HSP 1 Score: 51.2 bits (121), Expect = 9.6e-07
Identity = 24/47 (51.06%), Postives = 30/47 (63.83%), Query Frame = 1 

Query: 146 VPKFGSWDVRDPKSGDGYTAIFNKVKIEKQIGG-SNNPQTVPPLMNQ 192
           +PKFG WDV DP S +G+T IFNK + EK+ GG S++P    P  N+
Sbjct: 8   LPKFGEWDVNDPSSAEGFTVIFNKARNEKKGGGKSDSPGKDEPGYNK 54

[Close]
BLAST of MELO3C021706 vs. TAIR10
Match: AT5G55850.2 (AT5G55850.2 RPM1-interacting protein 4 (RIN4) family protein)

HSP 1 Score: 50.8 bits (120), Expect = 1.3e-06
Identity = 20/33 (60.61%), Postives = 23/33 (69.70%), Query Frame = 1 

Query: 146 VPKFGSWDVRDPKSGDGYTAIFNKVKIEKQIGG 179
           +PKFG WDV DP S +G+T IFNK + EK+ GG
Sbjct: 24  LPKFGEWDVNDPASAEGFTVIFNKARDEKKTGG 56

[Close]
BLAST of MELO3C021706 vs. NCBI nr
Match: gi|659118177|ref|XP_008458983.1| (PREDICTED: RPM1-interacting protein 4-like [Cucumis melo])

HSP 1 Score: 444.5 bits (1142), Expect = 1.1e-121
Identity = 215/216 (99.54%), Postives = 216/216 (100.00%), Query Frame = 1 

Query: 1   MAGTKSSSHVPKFGNWDSDDVPYTIFFENARELQAAGVTFDPNDPDTYPPAVFANQNSIP 60
           MAGTKSSSHVPKFGNWDSDDVPYTIFFENARELQAAGVTFDPNDPDTYPPAVFANQNSIP
Sbjct: 1   MAGTKSSSHVPKFGNWDSDDVPYTIFFENARELQAAGVTFDPNDPDTYPPAVFANQNSIP 60

Query: 61  ADHHRHHDGEDSHQRREIVNSGSEKLSSERSDSDYALLKAKQSGRKKKNSNGAEGMSRFS 120
           ADHHRHHDGEDSHQRREIVNSGSEKLSSERSDSDYALLKAKQSGRKKKNSNGAEGMSRFS
Sbjct: 61  ADHHRHHDGEDSHQRREIVNSGSEKLSSERSDSDYALLKAKQSGRKKKNSNGAEGMSRFS 120

Query: 121 PTTVDGKGNRNPRVRRNNEGEMMASVPKFGSWDVRDPKSGDGYTAIFNKVKIEKQIGGSN 180
           PTTVDGKGNRNPRVRRNNEGEMMASVPKFGSWDVRDPKSGDGYTAIFNKVKIEKQIGGSN
Sbjct: 121 PTTVDGKGNRNPRVRRNNEGEMMASVPKFGSWDVRDPKSGDGYTAIFNKVKIEKQIGGSN 180

Query: 181 NPQTVPPLMNQTKQPMTQTTVAKTSTQGSTSFVSKV 217
           NPQTVPPLMNQTKQPMTQTTVAKTSTQGSTSFVSK+
Sbjct: 181 NPQTVPPLMNQTKQPMTQTTVAKTSTQGSTSFVSKI 216

[Close]
BLAST of MELO3C021706 vs. NCBI nr
Match: gi|778664446|ref|XP_011660296.1| (PREDICTED: RPM1-interacting protein 4-like [Cucumis sativus])

HSP 1 Score: 404.4 bits (1038), Expect = 1.3e-109
Identity = 193/216 (89.35%), Postives = 205/216 (94.91%), Query Frame = 1 

Query: 1   MAGTKSSSHVPKFGNWDSDDVPYTIFFENARELQAAGVTFDPNDPDTYPPAVFANQNSIP 60
           MAG KSSSHVPKFGNWDSDDVPYTI+FENARELQAAG+TFDPNDPDTYPP   ANQNS P
Sbjct: 1   MAGPKSSSHVPKFGNWDSDDVPYTIYFENARELQAAGITFDPNDPDTYPPTAVANQNSSP 60

Query: 61  ADHHRHHDGEDSHQRREIVNSGSEKLSSERSDSDYALLKAKQSGRKKKNSNGAEGMSRFS 120
           A+HHR+HDG+DSHQRREIVNSGSEKLSSERSDSDYALLKAKQSGRKKKNSNGAEGMSRFS
Sbjct: 61  ANHHRYHDGDDSHQRREIVNSGSEKLSSERSDSDYALLKAKQSGRKKKNSNGAEGMSRFS 120

Query: 121 PTTVDGKGNRNPRVRRNNEGEMMASVPKFGSWDVRDPKSGDGYTAIFNKVKIEKQIGGSN 180
           P TVDGKGNRNPRVRRNNEGEMMASVPKFGSWDVRDPKSGDGYTAIFNKVKIEKQ+GGSN
Sbjct: 121 PATVDGKGNRNPRVRRNNEGEMMASVPKFGSWDVRDPKSGDGYTAIFNKVKIEKQVGGSN 180

Query: 181 NPQTVPPLMNQTKQPMTQTTVAKTSTQGSTSFVSKV 217
           + Q+VP LMNQTKQP+TQTTV K+S+ GSTSF SK+
Sbjct: 181 DTQSVPALMNQTKQPITQTTVGKSSSHGSTSFGSKI 216

[Close]
BLAST of MELO3C021706 vs. NCBI nr
Match: gi|590626635|ref|XP_007026224.1| (RPM1 interacting protein 4, putative [Theobroma cacao])

HSP 1 Score: 131.3 bits (329), Expect = 2.1e-27
Identity = 85/225 (37.78%), Postives = 116/225 (51.56%), Query Frame = 1 

Query: 1   MAGTKSSSHVPKFGNWDSDDVPYTIFFENARELQAAGVTFDPNDPDTYP----------- 60
           M+  +  SHVPKFG+WD+D++PYT +FENAR+ + AG+  +PNDP+  P           
Sbjct: 68  MSHVQLRSHVPKFGDWDNDNLPYTAYFENARK-ERAGIRMNPNDPEENPEAFMYTGGGLE 127

Query: 61  ----------PAVFANQNSIPADHHRHHDGEDSHQRREIVN---------------SGSE 120
                     P    +Q SIPAD + H+DG   H R+   N               S + 
Sbjct: 128 SNCDCQPVQVPPAAGSQKSIPADKN-HNDG---HSRQNAPNRNGSYDYQKSVRSHRSMAS 187

Query: 121 KLSSERSDSDYALLKAKQSGRKKKNSNGAEGMSRFSPTTVDGKGNRNPRVRRNNEGE--M 180
           +  SE+S+SD++LL+            G  G S FS +      +RN   + +N  +   
Sbjct: 188 ESGSEKSNSDHSLLRFSHRRANSGQKKGRVGGSSFSSSVSGQFTHRNGSYQSDNNRQHRR 247

Query: 181 MASVPKFGSWDVRDPKSGDGYTAIFNKVKIEKQIGGSNNPQTVPP 188
            AS+PKFG WD  DP SG+GYTAIFN+VK EKQ   S  P TVPP
Sbjct: 248 TASIPKFGEWDETDPTSGEGYTAIFNQVKAEKQSPTSKFP-TVPP 286

[Close]
BLAST of MELO3C021706 vs. NCBI nr
Match: gi|728851071|gb|KHG30514.1| (RPM1-interacting 4 -like protein [Gossypium arboreum])

HSP 1 Score: 129.0 bits (323), Expect = 1.0e-26
Identity = 80/206 (38.83%), Postives = 109/206 (52.91%), Query Frame = 1 

Query: 8   SHVPKFGNWDSDDVPYTIFFENARELQAAGVTFDPNDPDTYPPAVFANQN---------S 67
           SHVPKFG+WD+ D+PYT +FENAR+ + AG+  +PNDP+  P A    +          S
Sbjct: 9   SHVPKFGDWDNGDLPYTTYFENARK-EKAGIRMNPNDPEENPEAFMYTRGGPESNYDGRS 68

Query: 68  IPADHHRHH------DGEDSHQRREIVNSGSEKLSSERSD-SDYALLKAKQSGRKKKNSN 127
           +P    +HH      DG     ++         L SE +  SD ++L +    R     N
Sbjct: 69  VPVTADKHHRNAANKDGSSYDHQKSARRQRDTALESENNTGSDRSILHSSHRRRNSGQKN 128

Query: 128 GAEGMSRFSPTTVDGKGNRNPRVRRN-NEGEMMASVPKFGSWDVRDPKSGDGYTAIFNKV 187
              G S FS  +V G+  RN   + + N+    ASVPKFG WD  DP SG+G+T IFN++
Sbjct: 129 SRPGGSAFS-ASVSGQSQRNGNHQLDGNKHHRTASVPKFGEWDETDPTSGEGFTVIFNQL 188

Query: 188 KIEKQIGGSNNPQTVPP---LMNQTK 194
           K EKQ   S+N QTV P    MN +K
Sbjct: 189 KEEKQAPPSSNYQTVAPKVKTMNYSK 212

[Close]
BLAST of MELO3C021706 vs. NCBI nr
Match: gi|823240278|ref|XP_012452761.1| (PREDICTED: RPM1-interacting protein 4-like isoform X2 [Gossypium raimondii])

HSP 1 Score: 128.3 bits (321), Expect = 1.8e-26
Identity = 81/213 (38.03%), Postives = 113/213 (53.05%), Query Frame = 1 

Query: 1   MAGTKSSSHVPKFGNWDSDDVPYTIFFENARELQAAGVTFDPNDPDTYPPAVFANQN--- 60
           M+  K  SHVPKFG+WD+ D+PYT +FENAR+ + AG+  +PNDP+  P A+   +    
Sbjct: 1   MSEAKLRSHVPKFGDWDNGDLPYTTYFENARK-EKAGIRMNPNDPEENPEALMYTRGGPE 60

Query: 61  ------SIPADHHRHH------DGEDSHQRREIVNSGSEKLSSERSD-SDYALLKAKQSG 120
                 S+P    +HH      DG     ++      +  L SE +  SD ++L +    
Sbjct: 61  SNYDGRSVPVTADKHHQNAANKDGSSYDHQKSARRQRNTALESENNTGSDRSILPSNHRR 120

Query: 121 RKKKNSNGAEGMSRFSPTTVDGKGNRNPRVRRN-NEGEMMASVPKFGSWDVRDPKSGDGY 180
           R     NG  G S FS  +V G+  R    + + N+     SVPKFG WD  DP SG+G+
Sbjct: 121 RNSGQKNGRPGGSAFS-ASVSGQSQRTGNHQLDGNKHHRTPSVPKFGEWDETDPTSGEGF 180

Query: 181 TAIFNKVKIEKQIGGSNNPQTVPP---LMNQTK 194
           T IFN++K EKQ   S+N QTV P    MN +K
Sbjct: 181 TVIFNRLK-EKQAAPSSNYQTVAPEVKTMNYSK 210

The following BLAST results are available for this feature:
BLAST of MELO3C021706 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RIN4_ARATH3.2e-2031.79RPM1-interacting protein 4 OS=Arabidopsis thaliana GN=RIN4 PE=1 SV=1[more]
NOIL_ELAOL2.0e-0633.73NOI-like protein OS=Elaeis oleifera PE=2 SV=1[more]
BLAST of MELO3C021706 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0M0M0_CUCSA8.9e-11089.35Uncharacterized protein OS=Cucumis sativus GN=Csa_1G699040 PE=4 SV=1[more]
A0A061GGZ7_THECC1.4e-2737.78RPM1 interacting protein 4, putative OS=Theobroma cacao GN=TCM_030331 PE=4 SV=1[more]
A0A0B0Q117_GOSAR7.2e-2738.83RPM1-interacting 4-like protein OS=Gossypium arboreum GN=F383_15209 PE=4 SV=1[more]
A0A0D2SV69_GOSRA1.2e-2638.03Uncharacterized protein OS=Gossypium raimondii GN=B456_010G185300 PE=4 SV=1[more]
B9RXE0_RICCO2.1e-2637.97Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0902970 PE=4 SV=1[more]
BLAST of MELO3C021706 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G25070.11.8e-2131.79 RPM1 interacting protein 4[more]
AT2G04410.19.6e-0751.06 RPM1-interacting protein 4 (RIN4) family protein[more]
AT5G55850.21.3e-0660.61 RPM1-interacting protein 4 (RIN4) family protein[more]
BLAST of MELO3C021706 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659118177|ref|XP_008458983.1|1.1e-12199.54PREDICTED: RPM1-interacting protein 4-like [Cucumis melo][more]
gi|778664446|ref|XP_011660296.1|1.3e-10989.35PREDICTED: RPM1-interacting protein 4-like [Cucumis sativus][more]
gi|590626635|ref|XP_007026224.1|2.1e-2737.78RPM1 interacting protein 4, putative [Theobroma cacao][more]
gi|728851071|gb|KHG30514.1|1.0e-2638.83RPM1-interacting 4 -like protein [Gossypium arboreum][more]
gi|823240278|ref|XP_012452761.1|1.8e-2638.03PREDICTED: RPM1-interacting protein 4-like isoform X2 [Gossypium raimondii][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR008700TypeIII_avirulence_cleave
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C021706T1MELO3C021706T1mRNA


InterPro
Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008700RIN4, pathogenic type III effector avirulence factor Avr cleavage sitePFAMPF05627AvrRpt-cleavagecoord: 144..175
score: 3.4
NoneNo IPR availablePANTHERPTHR33159FAMILY NOT NAMEDcoord: 1..225
score: 1.3
NoneNo IPR availablePANTHERPTHR33159:SF8SUBFAMILY NOT NAMEDcoord: 1..225
score: 1.3

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
MELO3C021706Csa1G699040Cucumber (Chinese Long) v2cumeB017
MELO3C021706Cla004570Watermelon (97103) v1mewmB156
MELO3C021706ClCG01G009910Watermelon (Charleston Gray)mewcgB140
MELO3C021706Cla97C01G010030Watermelon (97103) v2mewmbB141
MELO3C021706Bhi08G000661Wax gourdmewgoB180
MELO3C021706CSPI01G33990Wild cucumber (PI 183967)cpimeB013
MELO3C021706Cucsa.332480Cucumber (Gy14) v1cgymeB543
MELO3C021706CmaCh18G005850Cucurbita maxima (Rimu)cmameB358
MELO3C021706CmoCh18G005620Cucurbita moschata (Rifu)cmomeB357
MELO3C021706Lsi02G010850Bottle gourd (USVL1VR-Ls)lsimeB180
MELO3C021706Cp4.1LG02g09510Cucurbita pepo (Zucchini)cpemeB493
MELO3C021706CsGy1G032510Cucumber (Gy14) v2cgybmeB012
MELO3C021706CsaV3_1G045860Cucumber (Chinese Long) v3cucmeB012
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C021706Silver-seed gourdcarmeB0229
MELO3C021706Watermelon (97103) v2mewmbB139
MELO3C021706Wax gourdmewgoB164
MELO3C021706Cucumber (Gy14) v1cgymeB018
MELO3C021706Cucurbita maxima (Rimu)cmameB192
MELO3C021706Cucurbita maxima (Rimu)cmameB364
MELO3C021706Cucurbita moschata (Rifu)cmomeB179
MELO3C021706Wild cucumber (PI 183967)cpimeB451
MELO3C021706Watermelon (Charleston Gray)mewcgB136
MELO3C021706Watermelon (97103) v1mewmB165
MELO3C021706Cucurbita pepo (Zucchini)cpemeB477
MELO3C021706Bottle gourd (USVL1VR-Ls)lsimeB129
MELO3C021706Cucumber (Gy14) v2cgybmeB396