Csa1G699040 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa1G699040
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionRPM1 interacting protein 4 transcript 2b; contains IPR008700 (Pathogenic type III effector avirulence factor Avr cleavage site)
LocationChr1 : 28065484 .. 28066524 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAGTGAGTGTTTTCTTCTTCTTCTTTGTTGCTTTTTTTTTCTTTTTATCCATCAACACAAAAGCACAAATAAAACCCAACTATTAAATGATATCGTGGTCGTGTGGAATTATTAGTTAGAAGTAAGTTTGTATTAGTCTTCAATTAATTTAATGTAATGGGCAGGGGCCAAAGTCGTCATCTCACGTTCCCAAATTCGGTAATTGGGATTCCGATGACGTACCGTACACCATCTATTTCGAAAACGCCCGTGAACTCCAAGCCGCCGGCATCACCTTCGATCCCAACGATCCCGACACCTACCCGCCGACCGCCGTCGCAAACCAAAATTCAAGCCCAGCCAACCACCACCGTTATCACGATGGCGACGACTCCCACCAGCGGCGAGAGATTGTGAACTCCGGGTCGGAGAAATTAAGCAGTGAGAGAAGCGATTCGGATTACGCGCTTCTGAAAGCGAAACAGAGTGGGAGGAAGAAGAAAAATAGCAATGGAGCGGAAGGAATGAGTAGATTTTCTCCGGCGACGGTGGACGGAAAGGGTAATCGGAACCCTAGGGTGCGGCGGAATAATGAGGGGGAAATGATGGCGTCGGTGCCGAAATTTGGAAGCTGGGATGTGAGGGATCCGAAATCGGGAGATGGATATACGGCGATATTCAATAAAGTGAAGATAGAGAAGCAAGTTGGAGGTTCTAATGATACTCAGAGTGTTCCGGCATTGATGAATCAAACGAAGCAGCCAATTACTCAAACAACTGTTGGTAAAAGTTCAAGTCATGGATCCACTTCATTTGGTTCCAAGGTACCCTCCTCTTTGTTCTTGTTTCTTTCTCAAGTTTCTATTAATTTAGGTCATGTTTGTTAATTATTTGGTCTCCATTCATAACTGTTTTTCTATATCAATCACATCTTTGTTGAAATCAATATTTGTTTATTTATGCAGATATGCTGTTGTTTATATCCAAAGTGAAGCACATCGCACATCATGACTGCTTCAAGAACAGACTCAAAACGGTGCAAATGTATTTGCTCATTT

mRNA sequence

ATGGCAGGGCCAAAGTCGTCATCTCACGTTCCCAAATTCGGTAATTGGGATTCCGATGACGTACCGTACACCATCTATTTCGAAAACGCCCGTGAACTCCAAGCCGCCGGCATCACCTTCGATCCCAACGATCCCGACACCTACCCGCCGACCGCCGTCGCAAACCAAAATTCAAGCCCAGCCAACCACCACCGTTATCACGATGGCGACGACTCCCACCAGCGGCGAGAGATTGTGAACTCCGGGTCGGAGAAATTAAGCAGTGAGAGAAGCGATTCGGATTACGCGCTTCTGAAAGCGAAACAGAGTGGGAGGAAGAAGAAAAATAGCAATGGAGCGGAAGGAATGAGTAGATTTTCTCCGGCGACGGTGGACGGAAAGGGTAATCGGAACCCTAGGGTGCGGCGGAATAATGAGGGGGAAATGATGGCGTCGGTGCCGAAATTTGGAAGCTGGGATGTGAGGGATCCGAAATCGGGAGATGGATATACGGCGATATTCAATAAAGTGAAGATAGAGAAGCAAGTTGGAGGTTCTAATGATACTCAGAGTGTTCCGGCATTGATGAATCAAACGAAGCAGCCAATTACTCAAACAACTGTTGGTAAAAGTTCAAGTCATGGATCCACTTCATTTGGTTCCAAGATATGCTGTTGTTTATATCCAAAGTGA

Coding sequence (CDS)

ATGGCAGGGCCAAAGTCGTCATCTCACGTTCCCAAATTCGGTAATTGGGATTCCGATGACGTACCGTACACCATCTATTTCGAAAACGCCCGTGAACTCCAAGCCGCCGGCATCACCTTCGATCCCAACGATCCCGACACCTACCCGCCGACCGCCGTCGCAAACCAAAATTCAAGCCCAGCCAACCACCACCGTTATCACGATGGCGACGACTCCCACCAGCGGCGAGAGATTGTGAACTCCGGGTCGGAGAAATTAAGCAGTGAGAGAAGCGATTCGGATTACGCGCTTCTGAAAGCGAAACAGAGTGGGAGGAAGAAGAAAAATAGCAATGGAGCGGAAGGAATGAGTAGATTTTCTCCGGCGACGGTGGACGGAAAGGGTAATCGGAACCCTAGGGTGCGGCGGAATAATGAGGGGGAAATGATGGCGTCGGTGCCGAAATTTGGAAGCTGGGATGTGAGGGATCCGAAATCGGGAGATGGATATACGGCGATATTCAATAAAGTGAAGATAGAGAAGCAAGTTGGAGGTTCTAATGATACTCAGAGTGTTCCGGCATTGATGAATCAAACGAAGCAGCCAATTACTCAAACAACTGTTGGTAAAAGTTCAAGTCATGGATCCACTTCATTTGGTTCCAAGATATGCTGTTGTTTATATCCAAAGTGA

Protein sequence

MAGPKSSSHVPKFGNWDSDDVPYTIYFENARELQAAGITFDPNDPDTYPPTAVANQNSSPANHHRYHDGDDSHQRREIVNSGSEKLSSERSDSDYALLKAKQSGRKKKNSNGAEGMSRFSPATVDGKGNRNPRVRRNNEGEMMASVPKFGSWDVRDPKSGDGYTAIFNKVKIEKQVGGSNDTQSVPALMNQTKQPITQTTVGKSSSHGSTSFGSKICCCLYPK*
Homology
[Close]
BLAST of Csa1G699040 vs. Swiss-Prot
Match: RIN4_ARATH (RPM1-interacting protein 4 OS=Arabidopsis thaliana GN=RIN4 PE=1 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 1.4e-20
Identity = 64/195 (32.82%), Postives = 96/195 (49.23%), Query Frame = 1 

Query: 8   SHVPKFGNWDSDD-VPYTIYFENARELQAAGITF-DPNDPDTYPPTAVANQNSSPANHHR 67
           S+VPKFGNW++++ VPYT YF+ AR+ +A G    +PNDP+    +        P++  +
Sbjct: 4   SNVPKFGNWEAEENVPYTAYFDKARKTRAPGSKIMNPNDPEYNSDSQSQAPPHPPSSRTK 63

Query: 68  YHDGDDSHQRREIVNSGSEKLSSERSDSDYALLKA--KQSGRKKKNSNGAEGMSRFSPAT 127
               D   + RE + S  E    +  D+  +  +A  K+ GR  +N N  +  S     +
Sbjct: 64  PEQVDTVRRSREHMRSREESELKQFGDAGGSSNEAANKRQGRASQN-NSYDNKSPLHKNS 123

Query: 128 VDGKGNRNPR---VRRNNEGEMMASVPKFGSWDVRDPKSGDGYTAIFNKVKIEKQVGGSN 187
            DG G   P+   +R +   E +  VPKFG WD  +P S DGYT IFNKV+ E+  G + 
Sbjct: 124 YDGTGKSRPKPTNLRADESPEKVTVVPKFGDWDENNPSSADGYTHIFNKVREERSSGANV 183

Query: 188 DTQSVPALMNQTKQP 196
              S       ++ P
Sbjct: 184 SGSSRTPTHQSSRNP 197

[Close]
BLAST of Csa1G699040 vs. Swiss-Prot
Match: NOIL_ELAOL (NOI-like protein OS=Elaeis oleifera PE=2 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 5.2e-07
Identity = 32/83 (38.55%), Postives = 38/83 (45.78%), Query Frame = 1 

Query: 8  SHVPKFGNWDSDDVPYTIYFENARELQAAGI-TFDPNDPDTYP----PTAVANQNSSPAN 67
          +HVPKFGNWD +++ YT YFE     +  G   F+PNDP+  P    P  VA  +     
Sbjct: 5  AHVPKFGNWDGENISYTTYFETVHRDKGDGSKIFNPNDPEENPQAFYPRTVAQDHQHSEK 64

Query: 68 HHR-----YH---DGDDSHQRRE 78
          HH      YH        H RRE
Sbjct: 65 HHNDTSTDYHVVKQHRRKHHRRE 87

[Close]
BLAST of Csa1G699040 vs. TrEMBL
Match: A0A0A0M0M0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G699040 PE=4 SV=1)

HSP 1 Score: 463.8 bits (1192), Expect = 1.2e-127
Identity = 223/223 (100.00%), Postives = 223/223 (100.00%), Query Frame = 1 

Query: 1   MAGPKSSSHVPKFGNWDSDDVPYTIYFENARELQAAGITFDPNDPDTYPPTAVANQNSSP 60
           MAGPKSSSHVPKFGNWDSDDVPYTIYFENARELQAAGITFDPNDPDTYPPTAVANQNSSP
Sbjct: 1   MAGPKSSSHVPKFGNWDSDDVPYTIYFENARELQAAGITFDPNDPDTYPPTAVANQNSSP 60

Query: 61  ANHHRYHDGDDSHQRREIVNSGSEKLSSERSDSDYALLKAKQSGRKKKNSNGAEGMSRFS 120
           ANHHRYHDGDDSHQRREIVNSGSEKLSSERSDSDYALLKAKQSGRKKKNSNGAEGMSRFS
Sbjct: 61  ANHHRYHDGDDSHQRREIVNSGSEKLSSERSDSDYALLKAKQSGRKKKNSNGAEGMSRFS 120

Query: 121 PATVDGKGNRNPRVRRNNEGEMMASVPKFGSWDVRDPKSGDGYTAIFNKVKIEKQVGGSN 180
           PATVDGKGNRNPRVRRNNEGEMMASVPKFGSWDVRDPKSGDGYTAIFNKVKIEKQVGGSN
Sbjct: 121 PATVDGKGNRNPRVRRNNEGEMMASVPKFGSWDVRDPKSGDGYTAIFNKVKIEKQVGGSN 180

Query: 181 DTQSVPALMNQTKQPITQTTVGKSSSHGSTSFGSKICCCLYPK 224
           DTQSVPALMNQTKQPITQTTVGKSSSHGSTSFGSKICCCLYPK
Sbjct: 181 DTQSVPALMNQTKQPITQTTVGKSSSHGSTSFGSKICCCLYPK 223

[Close]
BLAST of Csa1G699040 vs. TrEMBL
Match: A0A061GGZ7_THECC (RPM1 interacting protein 4, putative OS=Theobroma cacao GN=TCM_030331 PE=4 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 1.3e-28
Identity = 89/254 (35.04%), Postives = 125/254 (49.21%), Query Frame = 1 

Query: 8   SHVPKFGNWDSDDVPYTIYFENARELQAAGITFDPNDPDTYP------------------ 67
           SHVPKFG+WD+D++PYT YFENAR+ + AGI  +PNDP+  P                  
Sbjct: 75  SHVPKFGDWDNDNLPYTAYFENARK-ERAGIRMNPNDPEENPEAFMYTGGGLESNCDCQP 134

Query: 68  ---PTAVANQNSSPANHHRYHDGDDSHQRREIVN---------------SGSEKLSSERS 127
              P A  +Q S PA+ +     +D H R+   N               S + +  SE+S
Sbjct: 135 VQVPPAAGSQKSIPADKNH----NDGHSRQNAPNRNGSYDYQKSVRSHRSMASESGSEKS 194

Query: 128 DSDYALLKAKQSGRKKKNSNGAEGMSRFSPATVDGKGNRNPRVRRNNEGE--MMASVPKF 187
           +SD++LL+            G  G S FS +      +RN   + +N  +    AS+PKF
Sbjct: 195 NSDHSLLRFSHRRANSGQKKGRVGGSSFSSSVSGQFTHRNGSYQSDNNRQHRRTASIPKF 254

Query: 188 GSWDVRDPKSGDGYTAIFNKVKIEKQVGGSNDTQSVPALMNQTKQPITQTTVGKSSSHGS 224
           G WD  DP SG+GYTAIFN+VK EKQ    + T   P +  Q     +  +    S   +
Sbjct: 255 GEWDETDPTSGEGYTAIFNQVKAEKQ----SPTSKFPTVPPQQ----SNYSDCYHSKPRT 314

[Close]
BLAST of Csa1G699040 vs. TrEMBL
Match: D7TYX9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0516g00010 PE=4 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 1.2e-26
Identity = 87/247 (35.22%), Postives = 121/247 (48.99%), Query Frame = 1 

Query: 1   MAGPKSSSHVPKFGNWDSDDVPYTIYFENARELQAA--GITFDPNDPDTYPPTAVANQNS 60
           M+  +  SHVPKFGNWD+D+VPYT YF+NAR+ +    G+  +PNDP+  P   +  ++ 
Sbjct: 1   MSWLQQRSHVPKFGNWDNDNVPYTAYFDNARKEKTGPTGLRINPNDPEENPEAFMFGRSE 60

Query: 61  SPANHH--------------RYHDGDDSHQRR---EIVNSGSEKLS------SERSDSDY 120
           +   HH                H   DSH+R    +   SG    S      SE+S+ DY
Sbjct: 61  ATPPHHLNPQKPPPEENNQVEGHRRRDSHRRSPSDQQQRSGGTSRSINSESGSEKSNLDY 120

Query: 121 ALLKAKQSGRKKKNSNGAEGMSRFSPATVDGKGNRNPRVRR---NNEGEMMASVPKFGSW 180
           + L+     +K + S+G  G S  SP+       R   +     ++    +ASVPKFG+W
Sbjct: 121 SHLR-----KKSQLSDG--GSSSLSPSVPGPSHTRLKSIGTPPPDDHAHRVASVPKFGAW 180

Query: 181 DVRDPKSGDGYTAIFNKVKIEKQVGGSNDTQSVPALMNQTKQPITQTTVGKSSSHGSTSF 220
           D  DP SG+G+T IFNKVK E+QV          A M     P           H ++S 
Sbjct: 181 DETDPTSGEGFTVIFNKVKQERQVA---------ATMLPRVPPPQSAYSNSQKKHQNSSS 231

[Close]
BLAST of Csa1G699040 vs. TrEMBL
Match: A0A0B0Q117_GOSAR (RPM1-interacting 4-like protein OS=Gossypium arboreum GN=F383_15209 PE=4 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 2.1e-26
Identity = 84/236 (35.59%), Postives = 115/236 (48.73%), Query Frame = 1 

Query: 8   SHVPKFGNWDSDDVPYTIYFENARELQAAGITFDPNDPDTYPPTAVANQNSSPAN----- 67
           SHVPKFG+WD+ D+PYT YFENAR+ + AGI  +PNDP+  P   +  +    +N     
Sbjct: 9   SHVPKFGDWDNGDLPYTTYFENARK-EKAGIRMNPNDPEENPEAFMYTRGGPESNYDGRS 68

Query: 68  -------HHRYHDGDDS----HQRREIVNSGSEKLSSERSDSDYALLKAKQSGRKKKNSN 127
                  HHR     D     HQ+       +   S   + SD ++L +    R     N
Sbjct: 69  VPVTADKHHRNAANKDGSSYDHQKSARRQRDTALESENNTGSDRSILHSSHRRRNSGQKN 128

Query: 128 GAEGMSRFSPATVDGKGNRNPRVRRN-NEGEMMASVPKFGSWDVRDPKSGDGYTAIFNKV 187
              G S FS A+V G+  RN   + + N+    ASVPKFG WD  DP SG+G+T IFN++
Sbjct: 129 SRPGGSAFS-ASVSGQSQRNGNHQLDGNKHHRTASVPKFGEWDETDPTSGEGFTVIFNQL 188

Query: 188 KIEKQVGGSNDTQSVP---ALMNQTKQPITQTTVGKSSSHGSTSFGSKICCCLYPK 224
           K EKQ   S++ Q+V      MN +K                     KICCCL+ +
Sbjct: 189 KEEKQAPPSSNYQTVAPKVKTMNYSK--------------------LKICCCLFSR 222

[Close]
BLAST of Csa1G699040 vs. TrEMBL
Match: A0A0D2SV69_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_010G185300 PE=4 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 1.0e-25
Identity = 86/243 (35.39%), Postives = 120/243 (49.38%), Query Frame = 1 

Query: 1   MAGPKSSSHVPKFGNWDSDDVPYTIYFENARELQAAGITFDPNDPDTYP---------PT 60
           M+  K  SHVPKFG+WD+ D+PYT YFENAR+ + AGI  +PNDP+  P         P 
Sbjct: 1   MSEAKLRSHVPKFGDWDNGDLPYTTYFENARK-EKAGIRMNPNDPEENPEALMYTRGGPE 60

Query: 61  AVANQNSSPANHHRYH------DGDDSHQRREIVNSGSEKLSSERSD-SDYALLKAKQSG 120
           +  +  S P    ++H      DG     ++      +  L SE +  SD ++L +    
Sbjct: 61  SNYDGRSVPVTADKHHQNAANKDGSSYDHQKSARRQRNTALESENNTGSDRSILPSNHRR 120

Query: 121 RKKKNSNGAEGMSRFSPATVDGKGNRNPRVRRN-NEGEMMASVPKFGSWDVRDPKSGDGY 180
           R     NG  G S FS A+V G+  R    + + N+     SVPKFG WD  DP SG+G+
Sbjct: 121 RNSGQKNGRPGGSAFS-ASVSGQSQRTGNHQLDGNKHHRTPSVPKFGEWDETDPTSGEGF 180

Query: 181 TAIFNKVKIEKQVGGSNDTQSVP---ALMNQTKQPITQTTVGKSSSHGSTSFGSKICCCL 224
           T IFN++K EKQ   S++ Q+V      MN +K                     KICCCL
Sbjct: 181 TVIFNRLK-EKQAAPSSNYQTVAPEVKTMNYSK--------------------LKICCCL 220

[Close]
BLAST of Csa1G699040 vs. TAIR10
Match: AT3G25070.1 (AT3G25070.1 RPM1 interacting protein 4)

HSP 1 Score: 101.3 bits (251), Expect = 8.0e-22
Identity = 64/195 (32.82%), Postives = 96/195 (49.23%), Query Frame = 1 

Query: 8   SHVPKFGNWDSDD-VPYTIYFENARELQAAGITF-DPNDPDTYPPTAVANQNSSPANHHR 67
           S+VPKFGNW++++ VPYT YF+ AR+ +A G    +PNDP+    +        P++  +
Sbjct: 4   SNVPKFGNWEAEENVPYTAYFDKARKTRAPGSKIMNPNDPEYNSDSQSQAPPHPPSSRTK 63

Query: 68  YHDGDDSHQRREIVNSGSEKLSSERSDSDYALLKA--KQSGRKKKNSNGAEGMSRFSPAT 127
               D   + RE + S  E    +  D+  +  +A  K+ GR  +N N  +  S     +
Sbjct: 64  PEQVDTVRRSREHMRSREESELKQFGDAGGSSNEAANKRQGRASQN-NSYDNKSPLHKNS 123

Query: 128 VDGKGNRNPR---VRRNNEGEMMASVPKFGSWDVRDPKSGDGYTAIFNKVKIEKQVGGSN 187
            DG G   P+   +R +   E +  VPKFG WD  +P S DGYT IFNKV+ E+  G + 
Sbjct: 124 YDGTGKSRPKPTNLRADESPEKVTVVPKFGDWDENNPSSADGYTHIFNKVREERSSGANV 183

Query: 188 DTQSVPALMNQTKQP 196
              S       ++ P
Sbjct: 184 SGSSRTPTHQSSRNP 197

[Close]
BLAST of Csa1G699040 vs. TAIR10
Match: AT2G04410.1 (AT2G04410.1 RPM1-interacting protein 4 (RIN4) family protein)

HSP 1 Score: 53.5 bits (127), Expect = 1.9e-07
Identity = 21/37 (56.76%), Postives = 26/37 (70.27%), Query Frame = 1 

Query: 146 VPKFGSWDVRDPKSGDGYTAIFNKVKIEKQVGGSNDT 183
           +PKFG WDV DP S +G+T IFNK + EK+ GG +D+
Sbjct: 8   LPKFGEWDVNDPSSAEGFTVIFNKARNEKKGGGKSDS 44

[Close]
BLAST of Csa1G699040 vs. TAIR10
Match: AT5G55850.2 (AT5G55850.2 RPM1-interacting protein 4 (RIN4) family protein)

HSP 1 Score: 51.2 bits (121), Expect = 9.5e-07
Identity = 20/33 (60.61%), Postives = 23/33 (69.70%), Query Frame = 1 

Query: 146 VPKFGSWDVRDPKSGDGYTAIFNKVKIEKQVGG 179
           +PKFG WDV DP S +G+T IFNK + EK+ GG
Sbjct: 24  LPKFGEWDVNDPASAEGFTVIFNKARDEKKTGG 56

[Close]
BLAST of Csa1G699040 vs. TAIR10
Match: AT3G07195.1 (AT3G07195.1 RPM1-interacting protein 4 (RIN4) family protein)

HSP 1 Score: 49.7 bits (117), Expect = 2.8e-06
Identity = 50/183 (27.32%), Postives = 75/183 (40.98%), Query Frame = 1 

Query: 9   HVPKFGNWDSDDVPYTIYFENARELQAAGITFDPNDPDTYPPTAVANQNSSPANHHRYHD 68
           HVPKFG+W++ D P+T+ F+NAR  +   +      P+T  P  +A     PA   +  +
Sbjct: 6   HVPKFGDWNNQDQPFTVVFDNARTNKRQDLYESIEKPET-KPQELAPPPPQPARRIQKPE 65

Query: 69  GDDSHQR---REIVNSGSEKLSSERSDSDYALLKAKQSGRKKKNS---------NGAEGM 128
                ++   R    +   ++ +  +D  Y    +   GR    S          G+ G 
Sbjct: 66  APKPVKQDTPRAPPPTEKNRVKAPPADQLYGGGGSGGGGRSGSGSAGGLYGGYGGGSVGN 125

Query: 129 SRFSPATVDGKGNRNPRVRRNNEGEMMASVPKF-GSWDVRDPKSGD-GYTAIFNKVKIEK 178
            R  PA    +  +N  +R  N G    ++P F GS        GD  YT IF KVK E+
Sbjct: 126 QRQPPAPRPTQPRQN--LRGGNNGRGGTTIPPFPGSVGA----GGDMSYTQIFEKVKEER 181

[Close]
BLAST of Csa1G699040 vs. NCBI nr
Match: gi|778664446|ref|XP_011660296.1| (PREDICTED: RPM1-interacting protein 4-like [Cucumis sativus])

HSP 1 Score: 463.8 bits (1192), Expect = 1.7e-127
Identity = 223/223 (100.00%), Postives = 223/223 (100.00%), Query Frame = 1 

Query: 1   MAGPKSSSHVPKFGNWDSDDVPYTIYFENARELQAAGITFDPNDPDTYPPTAVANQNSSP 60
           MAGPKSSSHVPKFGNWDSDDVPYTIYFENARELQAAGITFDPNDPDTYPPTAVANQNSSP
Sbjct: 1   MAGPKSSSHVPKFGNWDSDDVPYTIYFENARELQAAGITFDPNDPDTYPPTAVANQNSSP 60

Query: 61  ANHHRYHDGDDSHQRREIVNSGSEKLSSERSDSDYALLKAKQSGRKKKNSNGAEGMSRFS 120
           ANHHRYHDGDDSHQRREIVNSGSEKLSSERSDSDYALLKAKQSGRKKKNSNGAEGMSRFS
Sbjct: 61  ANHHRYHDGDDSHQRREIVNSGSEKLSSERSDSDYALLKAKQSGRKKKNSNGAEGMSRFS 120

Query: 121 PATVDGKGNRNPRVRRNNEGEMMASVPKFGSWDVRDPKSGDGYTAIFNKVKIEKQVGGSN 180
           PATVDGKGNRNPRVRRNNEGEMMASVPKFGSWDVRDPKSGDGYTAIFNKVKIEKQVGGSN
Sbjct: 121 PATVDGKGNRNPRVRRNNEGEMMASVPKFGSWDVRDPKSGDGYTAIFNKVKIEKQVGGSN 180

Query: 181 DTQSVPALMNQTKQPITQTTVGKSSSHGSTSFGSKICCCLYPK 224
           DTQSVPALMNQTKQPITQTTVGKSSSHGSTSFGSKICCCLYPK
Sbjct: 181 DTQSVPALMNQTKQPITQTTVGKSSSHGSTSFGSKICCCLYPK 223

[Close]
BLAST of Csa1G699040 vs. NCBI nr
Match: gi|659118177|ref|XP_008458983.1| (PREDICTED: RPM1-interacting protein 4-like [Cucumis melo])

HSP 1 Score: 418.3 bits (1074), Expect = 8.4e-114
Identity = 199/222 (89.64%), Postives = 210/222 (94.59%), Query Frame = 1 

Query: 1   MAGPKSSSHVPKFGNWDSDDVPYTIYFENARELQAAGITFDPNDPDTYPPTAVANQNSSP 60
           MAG KSSSHVPKFGNWDSDDVPYTI+FENARELQAAG+TFDPNDPDTYPP   ANQNS P
Sbjct: 1   MAGTKSSSHVPKFGNWDSDDVPYTIFFENARELQAAGVTFDPNDPDTYPPAVFANQNSIP 60

Query: 61  ANHHRYHDGDDSHQRREIVNSGSEKLSSERSDSDYALLKAKQSGRKKKNSNGAEGMSRFS 120
           A+HHR+HDG+DSHQRREIVNSGSEKLSSERSDSDYALLKAKQSGRKKKNSNGAEGMSRFS
Sbjct: 61  ADHHRHHDGEDSHQRREIVNSGSEKLSSERSDSDYALLKAKQSGRKKKNSNGAEGMSRFS 120

Query: 121 PATVDGKGNRNPRVRRNNEGEMMASVPKFGSWDVRDPKSGDGYTAIFNKVKIEKQVGGSN 180
           P TVDGKGNRNPRVRRNNEGEMMASVPKFGSWDVRDPKSGDGYTAIFNKVKIEKQ+GGSN
Sbjct: 121 PTTVDGKGNRNPRVRRNNEGEMMASVPKFGSWDVRDPKSGDGYTAIFNKVKIEKQIGGSN 180

Query: 181 DTQSVPALMNQTKQPITQTTVGKSSSHGSTSFGSKICCCLYP 223
           + Q+VP LMNQTKQP+TQTTV K+S+ GSTSF SKICCCL P
Sbjct: 181 NPQTVPPLMNQTKQPMTQTTVAKTSTQGSTSFVSKICCCLGP 222

[Close]
BLAST of Csa1G699040 vs. NCBI nr
Match: gi|590626635|ref|XP_007026224.1| (RPM1 interacting protein 4, putative [Theobroma cacao])

HSP 1 Score: 134.8 bits (338), Expect = 1.9e-28
Identity = 89/254 (35.04%), Postives = 125/254 (49.21%), Query Frame = 1 

Query: 8   SHVPKFGNWDSDDVPYTIYFENARELQAAGITFDPNDPDTYP------------------ 67
           SHVPKFG+WD+D++PYT YFENAR+ + AGI  +PNDP+  P                  
Sbjct: 75  SHVPKFGDWDNDNLPYTAYFENARK-ERAGIRMNPNDPEENPEAFMYTGGGLESNCDCQP 134

Query: 68  ---PTAVANQNSSPANHHRYHDGDDSHQRREIVN---------------SGSEKLSSERS 127
              P A  +Q S PA+ +     +D H R+   N               S + +  SE+S
Sbjct: 135 VQVPPAAGSQKSIPADKNH----NDGHSRQNAPNRNGSYDYQKSVRSHRSMASESGSEKS 194

Query: 128 DSDYALLKAKQSGRKKKNSNGAEGMSRFSPATVDGKGNRNPRVRRNNEGE--MMASVPKF 187
           +SD++LL+            G  G S FS +      +RN   + +N  +    AS+PKF
Sbjct: 195 NSDHSLLRFSHRRANSGQKKGRVGGSSFSSSVSGQFTHRNGSYQSDNNRQHRRTASIPKF 254

Query: 188 GSWDVRDPKSGDGYTAIFNKVKIEKQVGGSNDTQSVPALMNQTKQPITQTTVGKSSSHGS 224
           G WD  DP SG+GYTAIFN+VK EKQ    + T   P +  Q     +  +    S   +
Sbjct: 255 GEWDETDPTSGEGYTAIFNQVKAEKQ----SPTSKFPTVPPQQ----SNYSDCYHSKPRT 314

[Close]
BLAST of Csa1G699040 vs. NCBI nr
Match: gi|743907185|ref|XP_011047017.1| (PREDICTED: RPM1-interacting protein 4-like isoform X1 [Populus euphratica])

HSP 1 Score: 130.6 bits (327), Expect = 3.5e-27
Identity = 84/240 (35.00%), Postives = 124/240 (51.67%), Query Frame = 1 

Query: 8   SHVPKFGNWDSDDVPYTIYFENARELQAAGITFDPNDPDTYPPT---------------- 67
           SHVPKFG WD D+VPYT YF+NAR+ ++ G+  +PNDP+  P                  
Sbjct: 5   SHVPKFGGWDKDNVPYTAYFDNARKGKS-GVRMNPNDPEENPEAFMYARGGMEDDVDFAS 64

Query: 68  -AVANQNSSPAN------HHRYHDGDDSHQRREIVNSGSEKLSSERSDSDYALLKAKQSG 127
            A    NS   N      H+ +      H++    N+ + +  SE+S SD++LL+++++G
Sbjct: 65  GAFEGTNSEKQNIEGLKGHNAHSMSPSDHRKNARHNNLTSESGSEKSSSDHSLLQSQKTG 124

Query: 128 RKKKNSNGAEGMSRFSPATVDGKGNRNPRVRRNNEGE-MMASVPKFGSWDVRDPKSGDGY 187
              +  N A   SR S       G+ +P    ++EG    AS+PKFG+WD  DP+SG+G+
Sbjct: 125 LAVEG-NKALSSSRHSRQR---NGSTHPF---DHEGHHRAASIPKFGAWDETDPRSGEGF 184

Query: 188 TAIFNKVKIEKQVGGSNDTQSVPALMNQTKQPITQTTVGKSSSHGSTSFGSKICCCLYPK 224
           T IFN+VK EKQ+               T  P   T   +  + G++SF SK CCC +PK
Sbjct: 185 TLIFNRVKEEKQIA-------------STTFPPVPTQPVRLRNEGNSSFRSKFCCCCFPK 223

[Close]
BLAST of Csa1G699040 vs. NCBI nr
Match: gi|359496977|ref|XP_002263923.2| (PREDICTED: RPM1-interacting protein 4 isoform X1 [Vitis vinifera])

HSP 1 Score: 128.3 bits (321), Expect = 1.7e-26
Identity = 87/247 (35.22%), Postives = 121/247 (48.99%), Query Frame = 1 

Query: 1   MAGPKSSSHVPKFGNWDSDDVPYTIYFENARELQAA--GITFDPNDPDTYPPTAVANQNS 60
           M+  +  SHVPKFGNWD+D+VPYT YF+NAR+ +    G+  +PNDP+  P   +  ++ 
Sbjct: 1   MSWLQQRSHVPKFGNWDNDNVPYTAYFDNARKEKTGPTGLRINPNDPEENPEAFMFGRSE 60

Query: 61  SPANHH--------------RYHDGDDSHQRR---EIVNSGSEKLS------SERSDSDY 120
           +   HH                H   DSH+R    +   SG    S      SE+S+ DY
Sbjct: 61  ATPPHHLNPQKPPPEENNQVEGHRRRDSHRRSPSDQQQRSGGTSRSINSESGSEKSNLDY 120

Query: 121 ALLKAKQSGRKKKNSNGAEGMSRFSPATVDGKGNRNPRVRR---NNEGEMMASVPKFGSW 180
           + L+     +K + S+G  G S  SP+       R   +     ++    +ASVPKFG+W
Sbjct: 121 SHLR-----KKSQLSDG--GSSSLSPSVPGPSHTRLKSIGTPPPDDHAHRVASVPKFGAW 180

Query: 181 DVRDPKSGDGYTAIFNKVKIEKQVGGSNDTQSVPALMNQTKQPITQTTVGKSSSHGSTSF 220
           D  DP SG+G+T IFNKVK E+QV          A M     P           H ++S 
Sbjct: 181 DETDPTSGEGFTVIFNKVKQERQVA---------ATMLPRVPPPQSAYSNSQKKHQNSSS 231

The following BLAST results are available for this feature:
BLAST of Csa1G699040 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RIN4_ARATH1.4e-2032.82RPM1-interacting protein 4 OS=Arabidopsis thaliana GN=RIN4 PE=1 SV=1[more]
NOIL_ELAOL5.2e-0738.55NOI-like protein OS=Elaeis oleifera PE=2 SV=1[more]
BLAST of Csa1G699040 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0M0M0_CUCSA1.2e-127100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_1G699040 PE=4 SV=1[more]
A0A061GGZ7_THECC1.3e-2835.04RPM1 interacting protein 4, putative OS=Theobroma cacao GN=TCM_030331 PE=4 SV=1[more]
D7TYX9_VITVI1.2e-2635.22Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0516g00010 PE=4 SV=... [more]
A0A0B0Q117_GOSAR2.1e-2635.59RPM1-interacting 4-like protein OS=Gossypium arboreum GN=F383_15209 PE=4 SV=1[more]
A0A0D2SV69_GOSRA1.0e-2535.39Uncharacterized protein OS=Gossypium raimondii GN=B456_010G185300 PE=4 SV=1[more]
BLAST of Csa1G699040 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G25070.18.0e-2232.82 RPM1 interacting protein 4[more]
AT2G04410.11.9e-0756.76 RPM1-interacting protein 4 (RIN4) family protein[more]
AT5G55850.29.5e-0760.61 RPM1-interacting protein 4 (RIN4) family protein[more]
AT3G07195.12.8e-0627.32 RPM1-interacting protein 4 (RIN4) family protein[more]
BLAST of Csa1G699040 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778664446|ref|XP_011660296.1|1.7e-127100.00PREDICTED: RPM1-interacting protein 4-like [Cucumis sativus][more]
gi|659118177|ref|XP_008458983.1|8.4e-11489.64PREDICTED: RPM1-interacting protein 4-like [Cucumis melo][more]
gi|590626635|ref|XP_007026224.1|1.9e-2835.04RPM1 interacting protein 4, putative [Theobroma cacao][more]
gi|743907185|ref|XP_011047017.1|3.5e-2735.00PREDICTED: RPM1-interacting protein 4-like isoform X1 [Populus euphratica][more]
gi|359496977|ref|XP_002263923.2|1.7e-2635.22PREDICTED: RPM1-interacting protein 4 isoform X1 [Vitis vinifera][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR008700TypeIII_avirulence_cleave
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU123772cucumber EST collection version 3.0transcribed_cluster
CU130027cucumber EST collection version 3.0transcribed_cluster
CU155882cucumber EST collection version 3.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa1G699040.1Csa1G699040.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU130027CU130027transcribed_cluster
CU155882CU155882transcribed_cluster
CU123772CU123772transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008700RIN4, pathogenic type III effector avirulence factor Avr cleavage sitePFAMPF05627AvrRpt-cleavagecoord: 144..175
score: 3.2
NoneNo IPR availablePANTHERPTHR33159FAMILY NOT NAMEDcoord: 1..222
score: 1.1
NoneNo IPR availablePANTHERPTHR33159:SF8SUBFAMILY NOT NAMEDcoord: 1..222
score: 1.1