CsaV3_3G015630 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: CDSexonpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.CATATTGAAAAGCTGTTGTTTCATGGGAGGAAGAGATTATGGGAATGACTATGAAGGTCATTATTTTGAAGATCAAAGTGGTGAAATTAGAAGAAGGATGTGGCCAAGTGATGAAGATAGAGGAAGTAGATGGGTTGCTGAGCCTGGAATTGATCGTAAAGCTTCTGCTTTTATTGCTAGATTCTACGAAGCTCGTGTTTCCGATCCCGAACGCCAAACTCTTTCTCTTTAA ATATTGAAAAGCTGTTGTTTCATGGGAGGAAGAGATTATGGGAATGACTATGAAGGTCATTATTTTGAAGATCAAAGTGGTGAAATTAGAAGAAGGATGTGGCCAAGTGATGAAGATAGAGGAAGTAGATGGGTTGCTGAGCCTGGAATTGATCGTAAAGCTTCTGCTTTTATTGCTAGATTCTACGAAGCTCGTGTTTCCGATCCCGAACGCCAAACTCTTTCTCTTTAA ATATTGAAAAGCTGTTGTTTCATGGGAGGAAGAGATTATGGGAATGACTATGAAGGTCATTATTTTGAAGATCAAAGTGGTGAAATTAGAAGAAGGATGTGGCCAAGTGATGAAGATAGAGGAAGTAGATGGGTTGCTGAGCCTGGAATTGATCGTAAAGCTTCTGCTTTTATTGCTAGATTCTACGAAGCTCGTGTTTCCGATCCCGAACGCCAAACTCTTTCTCTTTAA ILKSCCFMGGRDYGNDYEGHYFEDQSGEIRRRMWPSDEDRGSRWVAEPGIDRKASAFIARFYEARVSDPERQTLSL
BLAST of CsaV3_3G015630 vs. NCBI nr
Match: KGN57216.1 (hypothetical protein Csa_3G171730 [Cucumis sativus]) HSP 1 Score: 148.7 bits (374), Expect = 8.3e-33 Identity = 69/69 (100.00%), Postives = 69/69 (100.00%), Query Frame = 0
BLAST of CsaV3_3G015630 vs. NCBI nr
Match: ADN34048.1 (hypothetical protein [Cucumis melo subsp. melo]) HSP 1 Score: 137.1 bits (344), Expect = 2.5e-29 Identity = 66/69 (95.65%), Postives = 67/69 (97.10%), Query Frame = 0
BLAST of CsaV3_3G015630 vs. NCBI nr
Match: XP_022138231.1 (uncharacterized protein LOC111009454 [Momordica charantia]) HSP 1 Score: 112.8 bits (281), Expect = 5.0e-22 Identity = 59/77 (76.62%), Postives = 66/77 (85.71%), Query Frame = 0
BLAST of CsaV3_3G015630 vs. NCBI nr
Match: XP_022935735.1 (uncharacterized protein LOC111442555 [Cucurbita moschata] >XP_023540304.1 uncharacterized protein LOC111800720 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 110.9 bits (276), Expect = 1.9e-21 Identity = 57/77 (74.03%), Postives = 63/77 (81.82%), Query Frame = 0
BLAST of CsaV3_3G015630 vs. NCBI nr
Match: EXB75655.1 (hypothetical protein L484_026133 [Morus notabilis]) HSP 1 Score: 90.9 bits (224), Expect = 2.1e-15 Identity = 48/76 (63.16%), Postives = 54/76 (71.05%), Query Frame = 0
BLAST of CsaV3_3G015630 vs. TAIR10
Match: AT5G26620.1 (unknown protein) HSP 1 Score: 65.1 bits (157), Expect = 2.2e-11 Identity = 31/44 (70.45%), Postives = 37/44 (84.09%), Query Frame = 0
BLAST of CsaV3_3G015630 vs. TAIR10
Match: AT3G05858.1 (unknown protein) HSP 1 Score: 62.0 bits (149), Expect = 1.9e-10 Identity = 34/52 (65.38%), Postives = 39/52 (75.00%), Query Frame = 0
BLAST of CsaV3_3G015630 vs. TAIR10
Match: AT1G48325.1 (Expressed protein) HSP 1 Score: 45.1 bits (105), Expect = 2.3e-05 Identity = 21/48 (43.75%), Postives = 33/48 (68.75%), Query Frame = 0
BLAST of CsaV3_3G015630 vs. TrEMBL
Match: tr|A0A0A0LAW1|A0A0A0LAW1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G171730 PE=4 SV=1) HSP 1 Score: 148.7 bits (374), Expect = 5.5e-33 Identity = 69/69 (100.00%), Postives = 69/69 (100.00%), Query Frame = 0
BLAST of CsaV3_3G015630 vs. TrEMBL
Match: tr|E5GC50|E5GC50_CUCME (Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1) HSP 1 Score: 137.1 bits (344), Expect = 1.7e-29 Identity = 66/69 (95.65%), Postives = 67/69 (97.10%), Query Frame = 0
BLAST of CsaV3_3G015630 vs. TrEMBL
Match: tr|W9RIP1|W9RIP1_9ROSA (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_026133 PE=4 SV=1) HSP 1 Score: 90.9 bits (224), Expect = 1.4e-15 Identity = 48/76 (63.16%), Postives = 54/76 (71.05%), Query Frame = 0
BLAST of CsaV3_3G015630 vs. TrEMBL
Match: tr|A0A2P5CUX2|A0A2P5CUX2_PARAD (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_120410 PE=4 SV=1) HSP 1 Score: 86.3 bits (212), Expect = 3.3e-14 Identity = 45/76 (59.21%), Postives = 53/76 (69.74%), Query Frame = 0
BLAST of CsaV3_3G015630 vs. TrEMBL
Match: tr|A0A199U9N6|A0A199U9N6_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_S097000 PE=4 SV=1) HSP 1 Score: 85.1 bits (209), Expect = 7.4e-14 Identity = 46/76 (60.53%), Postives = 52/76 (68.42%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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