Csa7G048030 (gene) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTCTTTCTCTCTATATAAACCCTATTCCTTCTCTTCCATTTTTCATCCAATACCAACACCAATACCAATTCCATTCGAAGATTTCCCTTTTCCCTTACCCTAAATTCTCTGTCCAGTTCCATCCTCACCATGGTGGTTCCTCTCGGCCCCGGAAAGTTCTACGGCAGCAGCCTCCCTCGTCCCCGCTACTACTCCGACGTTAAGTTCAATGATGAGCGTGTCGATCCACCGACTCCAGTCCTCGATCCACTCCTTTCATGGGCTAACGAGGCTCATTGGTCAATGGGTGGTCTTAGCTTCAATCGCCTCAGGCTTCAAGGTCGGATCGAAGGCAATGTTCACAAACTTCGAACCGAGCGCGAGAAGGTTGCCAAGAAGAAGCTTAAAGCACAAAAACTTGACTCTGCGCCAAAGAGATCTGACCCAGATGCCGGAGCCGATGCCCATCGCCAATTGAAGAAGGCGAGATCTGTAACTCCACCACCGGCACCGATTGCAACCAAGAGACGGCGATTGATGGTTCTGTTTGAAGATGAGGACGATATTGGCATGGAAAAGGAAGAGATTGGGGTTGTGAAGAGGAGATTGGTGAAGAAACTGGGAGATGATTTTGATCGGGTGGCTGCAGAGAGTAAGAGGAGTCAATTGAAGGGTTTGAAGGACAGAAGCTCAGAGATCAATGGGGTTAATGAATCTGTAATGAAGATCGTTGAGGAGATTAATAATGAAAATACTAAAGTAAAAAAGACCAACATTGAAAGAAAGGGAAAAACTGGTGGAAATGTCGAGTCTGTATCTGTTTCTGGGTCAAGATCTTCTCCCAGATTGGCTAATAAGCGTGCCTTAAATTGATTTCAGTATATGAGTATAGTGTAGTTTTTTTTAATCTTTTGGTCTCCGATTTTCAAACCTGAGCCAACTCTTGTAATGTTCATTTCTTTCTGTGGAAATATGAAAATGGAATGTATGTCCTTCAATTATCTGATCTTTCTGATGACATTATTAGAAGATTTGTGTTCTGGGTTTTGTTCAATTCATGGGGGGAAACCCAAAGATCTAACCCCTTTATTAGGATAGGGGAAAAACTCACTTTCTTGGGGTTAAAATAGGCAGAAAAGAGCTCAAGGTGAAGCTCAATTTGCTGCCAGCAAG ATGGTGGTTCCTCTCGGCCCCGGAAAGTTCTACGGCAGCAGCCTCCCTCGTCCCCGCTACTACTCCGACGTTAAGTTCAATGATGAGCGTGTCGATCCACCGACTCCAGTCCTCGATCCACTCCTTTCATGGGCTAACGAGGCTCATTGGTCAATGGGTGGTCTTAGCTTCAATCGCCTCAGGCTTCAAGGTCGGATCGAAGGCAATGTTCACAAACTTCGAACCGAGCGCGAGAAGGTTGCCAAGAAGAAGCTTAAAGCACAAAAACTTGACTCTGCGCCAAAGAGATCTGACCCAGATGCCGGAGCCGATGCCCATCGCCAATTGAAGAAGGCGAGATCTGTAACTCCACCACCGGCACCGATTGCAACCAAGAGACGGCGATTGATGGTTCTGTTTGAAGATGAGGACGATATTGGCATGGAAAAGGAAGAGATTGGGGTTGTGAAGAGGAGATTGGTGAAGAAACTGGGAGATGATTTTGATCGGGTGGCTGCAGAGAGTAAGAGGAGTCAATTGAAGGGTTTGAAGGACAGAAGCTCAGAGATCAATGGGGTTAATGAATCTGTAATGAAGATCGTTGAGGAGATTAATAATGAAAATACTAAAGTAAAAAAGACCAACATTGAAAGAAAGGGAAAAACTGGTGGAAATGTCGAGTCTGTATCTGTTTCTGGGTCAAGATCTTCTCCCAGATTGGCTAATAAGCGTGCCTTAAATTGA ATGGTGGTTCCTCTCGGCCCCGGAAAGTTCTACGGCAGCAGCCTCCCTCGTCCCCGCTACTACTCCGACGTTAAGTTCAATGATGAGCGTGTCGATCCACCGACTCCAGTCCTCGATCCACTCCTTTCATGGGCTAACGAGGCTCATTGGTCAATGGGTGGTCTTAGCTTCAATCGCCTCAGGCTTCAAGGTCGGATCGAAGGCAATGTTCACAAACTTCGAACCGAGCGCGAGAAGGTTGCCAAGAAGAAGCTTAAAGCACAAAAACTTGACTCTGCGCCAAAGAGATCTGACCCAGATGCCGGAGCCGATGCCCATCGCCAATTGAAGAAGGCGAGATCTGTAACTCCACCACCGGCACCGATTGCAACCAAGAGACGGCGATTGATGGTTCTGTTTGAAGATGAGGACGATATTGGCATGGAAAAGGAAGAGATTGGGGTTGTGAAGAGGAGATTGGTGAAGAAACTGGGAGATGATTTTGATCGGGTGGCTGCAGAGAGTAAGAGGAGTCAATTGAAGGGTTTGAAGGACAGAAGCTCAGAGATCAATGGGGTTAATGAATCTGTAATGAAGATCGTTGAGGAGATTAATAATGAAAATACTAAAGTAAAAAAGACCAACATTGAAAGAAAGGGAAAAACTGGTGGAAATGTCGAGTCTGTATCTGTTTCTGGGTCAAGATCTTCTCCCAGATTGGCTAATAAGCGTGCCTTAAATTGA MVVPLGPGKFYGSSLPRPRYYSDVKFNDERVDPPTPVLDPLLSWANEAHWSMGGLSFNRLRLQGRIEGNVHKLRTEREKVAKKKLKAQKLDSAPKRSDPDAGADAHRQLKKARSVTPPPAPIATKRRRLMVLFEDEDDIGMEKEEIGVVKRRLVKKLGDDFDRVAAESKRSQLKGLKDRSSEINGVNESVMKIVEEINNENTKVKKTNIERKGKTGGNVESVSVSGSRSSPRLANKRALN*
BLAST of Csa7G048030 vs. TrEMBL
Match: A0A0A0K3S4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G048030 PE=4 SV=1) HSP 1 Score: 476.1 bits (1224), Expect = 2.5e-131 Identity = 240/240 (100.00%), Postives = 240/240 (100.00%), Query Frame = 1
BLAST of Csa7G048030 vs. TrEMBL
Match: W9R4I2_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_004788 PE=4 SV=1) HSP 1 Score: 236.5 bits (602), Expect = 3.4e-59 Identity = 140/253 (55.34%), Postives = 170/253 (67.19%), Query Frame = 1
BLAST of Csa7G048030 vs. TrEMBL
Match: B9RVZ1_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1174260 PE=4 SV=1) HSP 1 Score: 223.0 bits (567), Expect = 3.9e-55 Identity = 123/239 (51.46%), Postives = 162/239 (67.78%), Query Frame = 1
BLAST of Csa7G048030 vs. TrEMBL
Match: A0A061EAW7_THECC (Microtubule-associated protein 6, putative OS=Theobroma cacao GN=TCM_008115 PE=4 SV=1) HSP 1 Score: 221.1 bits (562), Expect = 1.5e-54 Identity = 131/250 (52.40%), Postives = 162/250 (64.80%), Query Frame = 1
BLAST of Csa7G048030 vs. TrEMBL
Match: A0A0D2SKK6_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_005G201200 PE=4 SV=1) HSP 1 Score: 218.4 bits (555), Expect = 9.6e-54 Identity = 124/247 (50.20%), Postives = 162/247 (65.59%), Query Frame = 1
BLAST of Csa7G048030 vs. TAIR10
Match: AT4G28310.1 (AT4G28310.1 unknown protein) HSP 1 Score: 167.9 bits (424), Expect = 7.5e-42 Identity = 106/238 (44.54%), Postives = 134/238 (56.30%), Query Frame = 1
BLAST of Csa7G048030 vs. TAIR10
Match: AT1G52270.1 (AT1G52270.1 unknown protein) HSP 1 Score: 55.1 bits (131), Expect = 7.1e-08 Identity = 34/77 (44.16%), Postives = 46/77 (59.74%), Query Frame = 1
HSP 2 Score: 53.1 bits (126), Expect = 2.7e-07 Identity = 23/39 (58.97%), Postives = 26/39 (66.67%), Query Frame = 1
BLAST of Csa7G048030 vs. NCBI nr
Match: gi|449438098|ref|XP_004136827.1| (PREDICTED: uncharacterized protein LOC101207471 [Cucumis sativus]) HSP 1 Score: 476.1 bits (1224), Expect = 3.6e-131 Identity = 240/240 (100.00%), Postives = 240/240 (100.00%), Query Frame = 1
BLAST of Csa7G048030 vs. NCBI nr
Match: gi|659110606|ref|XP_008455314.1| (PREDICTED: uncharacterized protein LOC103495510 [Cucumis melo]) HSP 1 Score: 446.4 bits (1147), Expect = 3.1e-122 Identity = 222/238 (93.28%), Postives = 232/238 (97.48%), Query Frame = 1
BLAST of Csa7G048030 vs. NCBI nr
Match: gi|703073457|ref|XP_010089552.1| (hypothetical protein L484_004788 [Morus notabilis]) HSP 1 Score: 236.5 bits (602), Expect = 4.9e-59 Identity = 140/253 (55.34%), Postives = 170/253 (67.19%), Query Frame = 1
BLAST of Csa7G048030 vs. NCBI nr
Match: gi|1009129728|ref|XP_015881923.1| (PREDICTED: uncharacterized protein LOC107417790 [Ziziphus jujuba]) HSP 1 Score: 236.5 bits (602), Expect = 4.9e-59 Identity = 142/265 (53.58%), Postives = 171/265 (64.53%), Query Frame = 1
BLAST of Csa7G048030 vs. NCBI nr
Match: gi|1009165334|ref|XP_015900977.1| (PREDICTED: uncharacterized protein LOC107434072 [Ziziphus jujuba]) HSP 1 Score: 236.5 bits (602), Expect = 4.9e-59 Identity = 141/265 (53.21%), Postives = 172/265 (64.91%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
This gene is associated with the following unigenes:
The following mRNA feature(s) are a part of this gene:
The following transcribed_cluster feature(s) are associated with this gene:
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |