Carg19124 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg19124
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Histone-lysine N-methyltransferase, H3 lysine-36 specific
Location	Cucurbita_argyrosperma_scaffold_112 : 298354 .. 299040 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTGTTCCTCTCGGACCCGGCAAGTTCTACGGCAGCAGTCTCCCCCGTCCCCGCTACTACACCGACGTCAAGTTCAACGATGAGCGTGTAGATCCACCCACGCCGGTCCTTGATCCGCTTCTCTCATGGGCGAATGAGGCTCACTGGTCAATGGGAGGTCTCAGCTTCAATCGCCTGAGACTTCAGGGTCGAATCGAAGGCAATATCAACAAGCTTCGAAATGAGCGTGAGAAGATTGCTAAGAAGAAGAAAGTAGAGACGCCTGAGAGATCTGACTCAGATCTCAGAGACGATGCCGATCGCCGGTCGAAAAAGTCGAAATCAGTATCACCACCGCCAGTGCCAATTGCAACGAAGAGACGACGATTGATGCCATTGTTTGACGCTGAGGATGATGATGTTGGTGAGCACAAGGAAGAAATTAGGGTTGTGAAGAGGAGATTGGTGAAGAAGCTGGGAGATGATTTCGATCGAGTCGCGGTGGAGGGGAAGAAGAACCAGTTGAAAGGTTCGAGGGATCGAAAGTTGGAAGTCAATGGGATCGATGAATCTGTAATGAAGATTGTTGAGGAGATTAACGATCAAAGTACGAAGGGGAAGAGTAGTGGAAAAAAACTGGAAAATGATTCAATTTCTGCCATTAGAACTTCTCCCAGATTAGCTAATAAGCGTAGATCAAATTGA

mRNA sequence

ATGGTTGTTCCTCTCGGACCCGGCAAGTTCTACGGCAGCAGTCTCCCCCGTCCCCGCTACTACACCGACGTCAAGTTCAACGATGAGCGTGTAGATCCACCCACGCCGGTCCTTGATCCGCTTCTCTCATGGGCGAATGAGGCTCACTGGTCAATGGGAGGTCTCAGCTTCAATCGCCTGAGACTTCAGGGTCGAATCGAAGGCAATATCAACAAGCTTCGAAATGAGCGTGAGAAGATTGCTAAGAAGAAGAAAGTAGAGACGCCTGAGAGATCTGACTCAGATCTCAGAGACGATGCCGATCGCCGGTCGAAAAAGTCGAAATCAGTATCACCACCGCCAGTGCCAATTGCAACGAAGAGACGACGATTGATGCCATTGTTTGACGCTGAGGATGATGATGTTGGTGAGCACAAGGAAGAAATTAGGGTTGTGAAGAGGAGATTGGTGAAGAAGCTGGGAGATGATTTCGATCGAGTCGCGGTGGAGGGGAAGAAGAACCAGTTGAAAGGTTCGAGGGATCGAAAGTTGGAAGTCAATGGGATCGATGAATCTGTAATGAAGATTGTTGAGGAGATTAACGATCAAAGTACGAAGGGGAAGAGTAGTGGAAAAAAACTGGAAAATGATTCAATTTCTGCCATTAGAACTTCTCCCAGATTAGCTAATAAGCGTAGATCAAATTGA

Coding sequence (CDS)

ATGGTTGTTCCTCTCGGACCCGGCAAGTTCTACGGCAGCAGTCTCCCCCGTCCCCGCTACTACACCGACGTCAAGTTCAACGATGAGCGTGTAGATCCACCCACGCCGGTCCTTGATCCGCTTCTCTCATGGGCGAATGAGGCTCACTGGTCAATGGGAGGTCTCAGCTTCAATCGCCTGAGACTTCAGGGTCGAATCGAAGGCAATATCAACAAGCTTCGAAATGAGCGTGAGAAGATTGCTAAGAAGAAGAAAGTAGAGACGCCTGAGAGATCTGACTCAGATCTCAGAGACGATGCCGATCGCCGGTCGAAAAAGTCGAAATCAGTATCACCACCGCCAGTGCCAATTGCAACGAAGAGACGACGATTGATGCCATTGTTTGACGCTGAGGATGATGATGTTGGTGAGCACAAGGAAGAAATTAGGGTTGTGAAGAGGAGATTGGTGAAGAAGCTGGGAGATGATTTCGATCGAGTCGCGGTGGAGGGGAAGAAGAACCAGTTGAAAGGTTCGAGGGATCGAAAGTTGGAAGTCAATGGGATCGATGAATCTGTAATGAAGATTGTTGAGGAGATTAACGATCAAAGTACGAAGGGGAAGAGTAGTGGAAAAAAACTGGAAAATGATTCAATTTCTGCCATTAGAACTTCTCCCAGATTAGCTAATAAGCGTAGATCAAATTGA

Protein sequence

MVVPLGPGKFYGSSLPRPRYYTDVKFNDERVDPPTPVLDPLLSWANEAHWSMGGLSFNRLRLQGRIEGNINKLRNEREKIAKKKKVETPERSDSDLRDDADRRSKKSKSVSPPPVPIATKRRRLMPLFDAEDDDVGEHKEEIRVVKRRLVKKLGDDFDRVAVEGKKNQLKGSRDRKLEVNGIDESVMKIVEEINDQSTKGKSSGKKLENDSISAIRTSPRLANKRRSN

Homology

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BLAST of Carg19124 vs. NCBI nr
Match: XP_023530343.1 (uncharacterized protein LOC111792943 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 406.4 bits (1043), Expect = 6.5e-110
Identity = 210/228 (92.11%), Postives = 211/228 (92.54%), Query Frame = 0


Query: 1   MVVPLGPGKFYGSSLPRPRYYTDVKFNDERVDPPTPVLDPLLSWANEAHWSMGGLSFNRL 60
           MVVPLGPGKFYGSSLPRPRYYTDVKFNDERVDPPTPVLDPLLSWANEAHWSMGGLSFNRL
Sbjct: 1   MVVPLGPGKFYGSSLPRPRYYTDVKFNDERVDPPTPVLDPLLSWANEAHWSMGGLSFNRL 60

Query: 61  RLQGRIEGNINKLRNEREKIAKKKKVETPERSDSDLRDXXXXXXXXXXXXXXPPVPIATK 120
           RLQGRIEGNINKLR EREKIAKKKKVETPERSDSDLRD              PPVPIATK
Sbjct: 61  RLQGRIEGNINKLRTEREKIAKKKKVETPERSDSDLRDDAVRRSKKSKSVSPPPVPIATK 120

Query: 121 RRRLMPLFDAEDDDVGEHKEEIRVVKRRLVKKLGDDFDRVAVEGKKNQLKGSRDRKLEVN 180
           RRRLMPLFDAE+DDVGEHKEEIRVVKRRLVKKLGDDFDRVAVEGKKNQLKGSRDR LEVN
Sbjct: 121 RRRLMPLFDAEEDDVGEHKEEIRVVKRRLVKKLGDDFDRVAVEGKKNQLKGSRDRNLEVN 180

Query: 181 GIDESVMKIVEEINDQSTKGKSSGKKLENDSISAIRTSPRLANKRRSN 229
           GIDESVMKIVEEINDQSTKGKSSGKKLENDSISA RTSPRLANKRRSN
Sbjct: 181 GIDESVMKIVEEINDQSTKGKSSGKKLENDSISATRTSPRLANKRRSN 228

[Close]

BLAST of Carg19124 vs. NCBI nr
Match: XP_022989501.1 (uncharacterized protein LOC111486558 [Cucurbita maxima])

HSP 1 Score: 400.6 bits (1028), Expect = 3.6e-108
Identity = 206/228 (90.35%), Postives = 209/228 (91.67%), Query Frame = 0


Query: 1   MVVPLGPGKFYGSSLPRPRYYTDVKFNDERVDPPTPVLDPLLSWANEAHWSMGGLSFNRL 60
           MVVPLGPGKFYGSSLPRPRYYTDVKFNDERVDPPTPVLDP LSWANEAHWSMGGLSFNRL
Sbjct: 1   MVVPLGPGKFYGSSLPRPRYYTDVKFNDERVDPPTPVLDPFLSWANEAHWSMGGLSFNRL 60

Query: 61  RLQGRIEGNINKLRNEREKIAKKKKVETPERSDSDLRDXXXXXXXXXXXXXXPPVPIATK 120
           RLQGRIEGN+NKLR EREKIAKKKKVET ERSDSD+RD              PPVPIATK
Sbjct: 61  RLQGRIEGNVNKLRTEREKIAKKKKVETQERSDSDVRDDAVRRSKKLKSVSPPPVPIATK 120

Query: 121 RRRLMPLFDAEDDDVGEHKEEIRVVKRRLVKKLGDDFDRVAVEGKKNQLKGSRDRKLEVN 180
           RRRLMPLFDAEDDDVGEHKEEIRVVKRRLVKKLGDDFDRVAVEGKKNQLKGSRDR LEVN
Sbjct: 121 RRRLMPLFDAEDDDVGEHKEEIRVVKRRLVKKLGDDFDRVAVEGKKNQLKGSRDRNLEVN 180

Query: 181 GIDESVMKIVEEINDQSTKGKSSGKKLENDSISAIRTSPRLANKRRSN 229
           GIDESVMKIVEEIND+STKGKSSGKKLENDSISA RTSPRLANKRRSN
Sbjct: 181 GIDESVMKIVEEINDESTKGKSSGKKLENDSISATRTSPRLANKRRSN 228

[Close]

BLAST of Carg19124 vs. NCBI nr
Match: XP_022930708.1 (uncharacterized protein LOC111437106 [Cucurbita moschata])

HSP 1 Score: 370.5 bits (950), Expect = 4.0e-99
Identity = 212/231 (91.77%), Postives = 212/231 (91.77%), Query Frame = 0


Query: 1   MVVPLGPGKFYGSSLPRPRYYTDVKFNDERVDPPTPVLDPLLSWANEAHWSMGGLSFNRL 60
           MVVPLGPGKFYGSSLPRPRYYTDVKFNDERVDPPTPVLDPLLSWANEAHWSMGGLSFNRL
Sbjct: 1   MVVPLGPGKFYGSSLPRPRYYTDVKFNDERVDPPTPVLDPLLSWANEAHWSMGGLSFNRL 60

Query: 61  RLQGRIEGNINKLRNEREKIAKKK---KVETPERSDSDLRDXXXXXXXXXXXXXXPPVPI 120
           RLQGRIEGNINKLRNEREKIAKKK                 XXXXXXXXXXXXXXPPVPI
Sbjct: 61  RLQGRIEGNINKLRNEREKIAKKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPVPI 120

Query: 121 ATKRRRLMPLFDAEDDDVGEHKEEIRVVKRRLVKKLGDDFDRVAVEGKKNQLKGSRDRKL 180
           ATKRRRLMPLFDAEDDDVGEHKEEIRVVKRRLVKKLGDDFDRVAVEGKKNQLKGSRDR L
Sbjct: 121 ATKRRRLMPLFDAEDDDVGEHKEEIRVVKRRLVKKLGDDFDRVAVEGKKNQLKGSRDRNL 180

Query: 181 EVNGIDESVMKIVEEINDQSTKGKSSGKKLENDSISAIRTSPRLANKRRSN 229
           EVNGIDESVMKIVEEINDQSTKGKSS KKLENDSISAIRTSPRLANKRRSN
Sbjct: 181 EVNGIDESVMKIVEEINDQSTKGKSSVKKLENDSISAIRTSPRLANKRRSN 231

[Close]

BLAST of Carg19124 vs. NCBI nr
Match: XP_004136827.1 (PREDICTED: uncharacterized protein LOC101207471 [Cucumis sativus] >KGN43619.1 hypothetical protein Csa_7G048030 [Cucumis sativus])

HSP 1 Score: 301.2 bits (770), Expect = 3.0e-78
Identity = 163/241 (67.63%), Postives = 189/241 (78.42%), Query Frame = 0


Query: 1   MVVPLGPGKFYGSSLPRPRYYTDVKFNDERVDPPTPVLDPLLSWANEAHWSMGGLSFNRL 60
           MVVPLGPGKFYGSSLPRPRYY+DVKFNDERVDPPTPVLDPLLSWANEAHWSMGGLSFNRL
Sbjct: 1   MVVPLGPGKFYGSSLPRPRYYSDVKFNDERVDPPTPVLDPLLSWANEAHWSMGGLSFNRL 60

Query: 61  RLQGRIEGNINKLRNEREKIAKKK----KVET-PERSDSDLRDXXXXXXXXXXXXXXPPV 120
           RLQGRIEGN++KLR EREK+AKKK    K+++ P+RSD D                 PP 
Sbjct: 61  RLQGRIEGNVHKLRTEREKVAKKKLKAQKLDSAPKRSDPDAGADAHRQLKKARSVTPPPA 120

Query: 121 PIATKRRRLMPLFDAEDDDVGEHKEEIRVVKRRLVKKLGDDFDRVAVEGKKNQLKGSRDR 180
           PIATKRRRLM LF+ ++DD+G  KEEI VVKRRLVKKLGDDFDRVA E K++QLKG +DR
Sbjct: 121 PIATKRRRLMVLFE-DEDDIGMEKEEIGVVKRRLVKKLGDDFDRVAAESKRSQLKGLKDR 180

Query: 181 KLEVNGIDESVMKIVEEINDQSTKGK--------SSGKKLENDSISAIRTSPRLANKRRS 229
             E+NG++ESVMKIVEEIN+++TK K         +G  +E+ S+S  R+SPRLANKR  
Sbjct: 181 SSEINGVNESVMKIVEEINNENTKVKKTNIERKGKTGGNVESVSVSGSRSSPRLANKRAL 240

[Close]

BLAST of Carg19124 vs. NCBI nr
Match: XP_008455314.1 (PREDICTED: uncharacterized protein LOC103495510 [Cucumis melo])

HSP 1 Score: 274.6 bits (701), Expect = 3.0e-70
Identity = 156/239 (65.27%), Postives = 175/239 (73.22%), Query Frame = 0


Query: 1   MVVPLGPGKFYGSSLPRPRYYTDVKFNDERVDPPTPVLDPLLSWANEAHWSMGGLSFNRL 60
           MVVPLGPGKFYGSSLPRPRYYTDVK NDERVDPPTPVLDPLLSWANEAHWSMGGLSFNRL
Sbjct: 1   MVVPLGPGKFYGSSLPRPRYYTDVKLNDERVDPPTPVLDPLLSWANEAHWSMGGLSFNRL 60

Query: 61  RLQGRIEGNINKLRNEREKIAKKK-KVE----TPERSDSDLRDXXXXXXXXXXXXXXPPV 120
           RLQGRIEGN++KLR EREK+AKKK K E     P+RSD D                 P  
Sbjct: 61  RLQGRIEGNVHKLRVEREKVAKKKLKAEKLDSAPKRSDPDAGADAHRQLKKARSVTPPXX 120

Query: 121 PIATKRRRLMPLFDAEDDDVGEHKEEIRVVKRRLVKKLGDDFDRVAVEGKKNQLKGSRDR 180
                      LF+ ++DDVG  KEEI VVKRRLVKKLGDDFDRVA E K+NQLKG +DR
Sbjct: 121 XXXXXXXXXXVLFE-DEDDVGMDKEEIGVVKRRLVKKLGDDFDRVAAESKRNQLKGLKDR 180

Query: 181 KLEVNGIDESVMKIVEEINDQST---------KGKSSGKKLENDSISAIRTSPRLANKR 226
             E+N ++ESVMKIVEEIN+++T         KGK+ G K+E+ S+S  RTSPRLANKR
Sbjct: 181 SSEINEVNESVMKIVEEINNENTKVKEINIEKKGKTVG-KVESVSVSGTRTSPRLANKR 237

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BLAST of Carg19124 vs. TAIR10
Match: AT4G28310.1 (unknown protein)

HSP 1 Score: 129.4 bits (324), Expect = 2.8e-30
Identity = 102/234 (43.59%), Postives = 129/234 (55.13%), Query Frame = 0


Query: 3   VPLGPGKFYGSSLPRPRYYTDVKFNDERVDPPTPVLDPLLSWANEAHWSMGGLSFNRLRL 62
           + + P  FYG+ LPRPR++ + KFND RVDPP  VLDPLLSWA +AHWSMGGL+F RLRL
Sbjct: 9   IAIRPVSFYGNGLPRPRFFDNPKFNDYRVDPPLSVLDPLLSWARDAHWSMGGLNFTRLRL 68

Query: 63  QGRIEGNINKLRNEREKIAKKKKVETPERSDSDLRDXXXXXXXXXXXXXXPPVPIATKRR 122
           QGRIEGN+NKLR + EK        TP + +S  +      XXXXXXXXX          
Sbjct: 69  QGRIEGNVNKLRAQLEK-------STPVKLESGRK------XXXXXXXXXXXXXXXXXXX 128

Query: 123 RLMPLFDAEDDDVGEHKEEIRVVKRRLVKKLGDDFDRVAVEGKKNQLKGSRDRKLEVNGI 182
             + L D++D++VG   E +  ++R    KL DDFDRVA                     
Sbjct: 129 XYLDLNDSDDEEVGSEDEGVVRIRR----KLSDDFDRVA--------------------- 188

Query: 183 DESVMKIVEEINDQSTKGKSSGKK--------LENDSISAIRTSPRLANKRRSN 229
           +ES  K+V E N +S K +   KK              S+ R+SPRLA KR SN
Sbjct: 189 EESKTKLV-EANKKSIKSEFVEKKXXXXXXXXXXXXKTSSTRSSPRLA-KRSSN 202

[Close]

BLAST of Carg19124 vs. TAIR10
Match: AT1G52270.1 (unknown protein)

HSP 1 Score: 69.3 bits (168), Expect = 3.4e-12
Identity = 55/184 (29.89%), Postives = 79/184 (42.93%), Query Frame = 0


Query: 7   PGKFYGSSLPRPRYYTDVKFNDERVDPPTPVLDPLLSWANEAHWSMGGLSFNRLRLQGRI 66
           P  FY + LPRPR++ + +FN  RVD P  VLDPLLSWA                     
Sbjct: 13  PVAFYRNGLPRPRFFDNHRFNSYRVDTPLSVLDPLLSWA--------------------- 72

Query: 67  EGNINKLRNEREKIAKKKKVETPERSDSDLRDXXXXXXXXXXXXXXPPVPIATKRRRLMP 126
                    + EK +                               P  PI  KRRR + 
Sbjct: 73  ---------QLEKSS-------------------------------PAAPIVLKRRRYL- 126

Query: 127 LFDAEDDDVGEHKEEIRVVKRRLVKKLGDDFDRVAVEGKKNQLKGSRDRKLEVNGIDESV 186
               +D+++G   E++ VV  R+ +KL DDFDRVA E K   ++ +  +K+E +  +E +
Sbjct: 133 ----DDEEIG--SEDVGVV--RIRRKLSDDFDRVAEESKTELVEANEKKKIEQDKFNEVI 126

Query: 187 MKIV 191
            KIV
Sbjct: 193 SKIV 126

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BLAST of Carg19124 vs. TrEMBL
Match: tr|A0A0A0K3S4|A0A0A0K3S4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G048030 PE=4 SV=1)

HSP 1 Score: 301.2 bits (770), Expect = 2.0e-78
Identity = 163/241 (67.63%), Postives = 189/241 (78.42%), Query Frame = 0


Query: 1   MVVPLGPGKFYGSSLPRPRYYTDVKFNDERVDPPTPVLDPLLSWANEAHWSMGGLSFNRL 60
           MVVPLGPGKFYGSSLPRPRYY+DVKFNDERVDPPTPVLDPLLSWANEAHWSMGGLSFNRL
Sbjct: 1   MVVPLGPGKFYGSSLPRPRYYSDVKFNDERVDPPTPVLDPLLSWANEAHWSMGGLSFNRL 60

Query: 61  RLQGRIEGNINKLRNEREKIAKKK----KVET-PERSDSDLRDXXXXXXXXXXXXXXPPV 120
           RLQGRIEGN++KLR EREK+AKKK    K+++ P+RSD D                 PP 
Sbjct: 61  RLQGRIEGNVHKLRTEREKVAKKKLKAQKLDSAPKRSDPDAGADAHRQLKKARSVTPPPA 120

Query: 121 PIATKRRRLMPLFDAEDDDVGEHKEEIRVVKRRLVKKLGDDFDRVAVEGKKNQLKGSRDR 180
           PIATKRRRLM LF+ ++DD+G  KEEI VVKRRLVKKLGDDFDRVA E K++QLKG +DR
Sbjct: 121 PIATKRRRLMVLFE-DEDDIGMEKEEIGVVKRRLVKKLGDDFDRVAAESKRSQLKGLKDR 180

Query: 181 KLEVNGIDESVMKIVEEINDQSTKGK--------SSGKKLENDSISAIRTSPRLANKRRS 229
             E+NG++ESVMKIVEEIN+++TK K         +G  +E+ S+S  R+SPRLANKR  
Sbjct: 181 SSEINGVNESVMKIVEEINNENTKVKKTNIERKGKTGGNVESVSVSGSRSSPRLANKRAL 240

[Close]

BLAST of Carg19124 vs. TrEMBL
Match: tr|A0A1S3C0M4|A0A1S3C0M4_CUCME (uncharacterized protein LOC103495510 OS=Cucumis melo OX=3656 GN=LOC103495510 PE=4 SV=1)

HSP 1 Score: 274.6 bits (701), Expect = 2.0e-70
Identity = 156/239 (65.27%), Postives = 175/239 (73.22%), Query Frame = 0


Query: 1   MVVPLGPGKFYGSSLPRPRYYTDVKFNDERVDPPTPVLDPLLSWANEAHWSMGGLSFNRL 60
           MVVPLGPGKFYGSSLPRPRYYTDVK NDERVDPPTPVLDPLLSWANEAHWSMGGLSFNRL
Sbjct: 1   MVVPLGPGKFYGSSLPRPRYYTDVKLNDERVDPPTPVLDPLLSWANEAHWSMGGLSFNRL 60

Query: 61  RLQGRIEGNINKLRNEREKIAKKK-KVE----TPERSDSDLRDXXXXXXXXXXXXXXPPV 120
           RLQGRIEGN++KLR EREK+AKKK K E     P+RSD D                 P  
Sbjct: 61  RLQGRIEGNVHKLRVEREKVAKKKLKAEKLDSAPKRSDPDAGADAHRQLKKARSVTPPXX 120

Query: 121 PIATKRRRLMPLFDAEDDDVGEHKEEIRVVKRRLVKKLGDDFDRVAVEGKKNQLKGSRDR 180
                      LF+ ++DDVG  KEEI VVKRRLVKKLGDDFDRVA E K+NQLKG +DR
Sbjct: 121 XXXXXXXXXXVLFE-DEDDVGMDKEEIGVVKRRLVKKLGDDFDRVAAESKRNQLKGLKDR 180

Query: 181 KLEVNGIDESVMKIVEEINDQST---------KGKSSGKKLENDSISAIRTSPRLANKR 226
             E+N ++ESVMKIVEEIN+++T         KGK+ G K+E+ S+S  RTSPRLANKR
Sbjct: 181 SSEINEVNESVMKIVEEINNENTKVKEINIEKKGKTVG-KVESVSVSGTRTSPRLANKR 237

[Close]

BLAST of Carg19124 vs. TrEMBL
Match: tr|A0A2C9UTW7|A0A2C9UTW7_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_13G146300 PE=4 SV=1)

HSP 1 Score: 193.0 bits (489), Expect = 7.5e-46
Identity = 118/254 (46.46%), Postives = 155/254 (61.02%), Query Frame = 0


Query: 1   MVVPLGPGKFYGSSLPRPRYYTDVKFNDERVDPPTPVLDPLLSWANEAHWSMGGLSFNRL 60
           MVV LGPGKFYGSSLPRPR YTDVK N +RVDPP  V+DP LSWA EAHWSMGGLSF RL
Sbjct: 57  MVVSLGPGKFYGSSLPRPRIYTDVKLNPDRVDPPLSVMDPFLSWAEEAHWSMGGLSFKRL 116

Query: 61  RLQGRIEGNINKLRNEREKIAKKKKVETPERS----DSDLRDXXXXXXXXXXXXXXPPVP 120
           RLQGRIEGN+NKLR  REK+AK +   +P+ S      +++D              PP P
Sbjct: 117 RLQGRIEGNVNKLRKHREKLAKSQVSSSPKVSRGSEQGEVKDKNENNRKRVGSDAPPPAP 176

Query: 121 IATKRRRLMPLF--DAEDDDVGEHKEEIRVVKRRLVKKLGDDFDRVAV------EGKKNQ 180
           + TKRR+ M LF  D+E++++   +E     K++ V+KL  DF++VA        GK   
Sbjct: 177 MVTKRRKFMDLFDEDSEEEELQAMEEVEAAGKKKPVRKLAGDFEKVAKINDVNNTGKIGN 236

Query: 181 LKGSRDRKLEV-----NGIDESVMKIVEEINDQSTKGKSSGKKLEN------------DS 226
           + G R R+  +      G+ ++VMK+V+E+N +    +S+GKKL+               
Sbjct: 237 VIGLRTRRRGLEEGGSGGMGDAVMKVVKELNVK----ESAGKKLKGXXXXXXXXXXXXXX 296

[Close]

BLAST of Carg19124 vs. TrEMBL
Match: tr|A0A2P5BLH8|A0A2P5BLH8_PARAD (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_228330 PE=4 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 8.6e-42
Identity = 135/267 (50.56%), Postives = 157/267 (58.80%), Query Frame = 0


Query: 1   MVVPLGPGKFYGSSLPRPRYYTDVKFNDERVDPPTPVLDPLLSWANEAHWSMGGLSFNRL 60
           MVVPLGPGKFYG+SLPRPR YTDVK NDERVDPP  V+D LLSWANEAHWSMGGLSF RL
Sbjct: 1   MVVPLGPGKFYGTSLPRPRIYTDVKLNDERVDPPVRVMDALLSWANEAHWSMGGLSFKRL 60

Query: 61  RLQGRIEGNINKLRNEREKIAKKK------------KVETPERSDSDLRDXXXXXXXXXX 120
           RLQGRIEG++ KLR +RE+IAK K                          XXXXXXXXXX
Sbjct: 61  RLQGRIEGSVTKLRAQRERIAKNKTKLAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 XXXXPPVPIATKRRRLMPLFDAEDDDVGEHKEEI----RVVKRRLVKKLGDDFDRVAVEG 180
           XXXX         R+ M L D + D+   HKEE     RV +RRLVKKLGDDFD+VA E 
Sbjct: 121 XXXXXXXXXXXXXRKFMDLIDKDADNEIGHKEEASGAHRVRRRRLVKKLGDDFDKVASEN 180

Query: 181 KK-------------NQLKGSRDRKLEVNGID----ESVMKIVEEINDQSTKGK------ 225
           ++             +   GSR R+  +   D    E+VMK+VEE+N    +GK      
Sbjct: 181 EEAKETPDEGLSNGGSGSVGSRARRQILEDTDAPATETVMKVVEEVNKLRFEGKKSKGSV 240

[Close]

BLAST of Carg19124 vs. TrEMBL
Match: tr|A0A0D2SKK6|A0A0D2SKK6_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_005G201200 PE=4 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 1.5e-38
Identity = 113/236 (47.88%), Postives = 144/236 (61.02%), Query Frame = 0


Query: 1   MVVPLGPGKFYGSSLPRPRYYTDVKFNDERVDPPTPVLDPLLSWANEAHWSMGGLSFNRL 60
           MVVPLGPGKFYGSSLPRPR YT+ +FN ERV+PP PVLDPLLSWANEAHWSMGGLSF RL
Sbjct: 1   MVVPLGPGKFYGSSLPRPRIYTETRFNSERVNPPVPVLDPLLSWANEAHWSMGGLSFKRL 60

Query: 61  RLQGRIEGNINKLRNEREKIAKKKKVETPERSDSDLRDXXXXXXXXXXXXXXPPVPIATK 120
           RLQGRIEGN+ +L+ +R+K    K    P++++SD         XXXXXXXX        
Sbjct: 61  RLQGRIEGNVQRLKAQRDKFLNNKD-PIPKKNNSD------ASFXXXXXXXXXXXXXXXX 120

Query: 121 RRRLMPLFDAEDDDVGEHKEEIRVVKRRLVKKLGDDFDRVAVEGKKNQLKGSRDRKLEVN 180
                       +++  ++EE RV+++  V+KLGDDF+RVA +       G +    +  
Sbjct: 121 XXXXXXXXXXXXNEIVMNREEKRVLRKGAVRKLGDDFERVAKDKDSGVASGGKRGFSDGI 180

Query: 181 GIDESVMKIVEEINDQSTKGKS-------SGKKLENDSI-----SAIRTSPRLANK 225
           GID  VMKIVEE+N +S + K         G K   D +     +  R SPRLA +
Sbjct: 181 GID--VMKIVEEVNVESEEIKKKXXXRIVKGLKKGTDEVRSGTGTTTRASPRLAKR 227

The following BLAST results are available for this feature:

BLAST of Carg19124 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023530343.1	6.5e-110	92.11	uncharacterized protein LOC111792943 [Cucurbita pepo subsp. pepo]	[more]
XP_022989501.1	3.6e-108	90.35	uncharacterized protein LOC111486558 [Cucurbita maxima]	[more]
XP_022930708.1	4.0e-99	91.77	uncharacterized protein LOC111437106 [Cucurbita moschata]	[more]
XP_004136827.1	3.0e-78	67.63	PREDICTED: uncharacterized protein LOC101207471 [Cucumis sativus] >KGN43619.1 hy...	[more]
XP_008455314.1	3.0e-70	65.27	PREDICTED: uncharacterized protein LOC103495510 [Cucumis melo]	[more]

BLAST of Carg19124 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G28310.1	2.8e-30	43.59	unknown protein	[more]
AT1G52270.1	3.4e-12	29.89	unknown protein	[more]

BLAST of Carg19124 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg19124 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0K3S4\|A0A0A0K3S4_CUCSA	2.0e-78	67.63	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G048030 PE=4 SV=1	[more]
tr\|A0A1S3C0M4\|A0A1S3C0M4_CUCME	2.0e-70	65.27	uncharacterized protein LOC103495510 OS=Cucumis melo OX=3656 GN=LOC103495510 PE=...	[more]
tr\|A0A2C9UTW7\|A0A2C9UTW7_MANES	7.5e-46	46.46	Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_13G146300 PE=4 SV=...	[more]
tr\|A0A2P5BLH8\|A0A2P5BLH8_PARAD	8.6e-42	50.56	Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_228330 PE...	[more]
tr\|A0A0D2SKK6\|A0A0D2SKK6_GOSRA	1.5e-38	47.88	Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_005G201200 PE=4 ...	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg19124-RA	Carg19124-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 207..222
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 193..228
None	No IPR available	PANTHER	PTHR35103	FAMILY NOT NAMED	coord: 1..225

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg19124	Cla002268	Watermelon (97103) v1	carwmB0717
Carg19124	Csa7G048030	Cucumber (Chinese Long) v2	carcuB0739
Carg19124	MELO3C018732	Melon (DHL92) v3.5.1	carmeB0715
Carg19124	ClCG07G002870	Watermelon (Charleston Gray)	carwcgB0697
Carg19124	CSPI07G04670	Wild cucumber (PI 183967)	carcpiB0755
Carg19124	Cucsa.147620	Cucumber (Gy14) v1	carcgyB0810
Carg19124	CmaCh11G018790	Cucurbita maxima (Rimu)	carcmaB1006
Carg19124	CmoCh11G019580	Cucurbita moschata (Rifu)	carcmoB0979
Carg19124	CmoCh19G010280	Cucurbita moschata (Rifu)	carcmoB0981
Carg19124	Lsi11G015610	Bottle gourd (USVL1VR-Ls)	carlsiB659
Carg19124	Cp4.1LG04g03090	Cucurbita pepo (Zucchini)	carcpeB1015
Carg19124	Cp4.1LG15g08060	Cucurbita pepo (Zucchini)	carcpeB1013
Carg19124	CsGy7G004240	Cucumber (Gy14) v2	carcgybB0717
Carg19124	MELO3C018732.2	Melon (DHL92) v3.6.1	carmedB0728
Carg19124	CsaV3_7G004470	Cucumber (Chinese Long) v3	carcucB0758
Carg19124	Cla97C07G131200	Watermelon (97103) v2	carwmbB0754
Carg19124	Bhi05G001623	Wax gourd	carwgoB0847

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg19124	Carg19240	Silver-seed gourd	carcarB590

The following block(s) are covering this gene:


Gene	Organism	Block
Carg19124	Wax gourd	carwgoB0849
Carg19124	Silver-seed gourd	carcarB035
Carg19124	Silver-seed gourd	carcarB176
Carg19124	Cucumber (Gy14) v2	carcgybB0716
Carg19124	Cucumber (Gy14) v1	carcgyB0808
Carg19124	Cucumber (Gy14) v1	carcgyB0809
Carg19124	Cucurbita maxima (Rimu)	carcmaB1007
Carg19124	Cucurbita maxima (Rimu)	carcmaB1008
Carg19124	Cucurbita maxima (Rimu)	carcmaB1010
Carg19124	Cucurbita moschata (Rifu)	carcmoB0980
Carg19124	Cucurbita moschata (Rifu)	carcmoB0983
Carg19124	Cucurbita pepo (Zucchini)	carcpeB1012
Carg19124	Cucurbita pepo (Zucchini)	carcpeB1016
Carg19124	Cucumber (Chinese Long) v3	carcucB0757
Carg19124	Bottle gourd (USVL1VR-Ls)	carlsiB657
Carg19124	Melon (DHL92) v3.5.1	carmeB0714
Carg19124	Melon (DHL92) v3.6.1	carmedB0727
Carg19124	Watermelon (Charleston Gray)	carwcgB0695
Carg19124	Watermelon (97103) v1	carwmB0719
Carg19124	Watermelon (97103) v2	carwmbB0751