CU102221 (transcribed_cluster) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CU102221
Type	transcribed_cluster
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	Unknown protein
Location	Chr7 : 2986119 .. 2986779 (-)
Sequence length	664

Genome Viewer

Sequences

The following sequences are available for this feature:

transcribed_cluster sequence

CCAGAAAGATCAGATAATTGAAGGACATACATTCCATTTTCATATTTCCACAGAAAGAAATGAACATTACAAGAGTTGGCTCAGGTTTGAAAATCGGAGACCAAAAGATTAAAAAAACTACACTATACTCATATACTGAAATCAATTTAAGGCACGCTTATTAGCCAATCTGGGAGAAGATCTTGACCCAGAAACAGATACAGACTCGACATTTCCACCAGTTTTTCCCTTTCTTTCAATGTTGGTCTTTTTTACTTTTAGTATTTTCATTATTAATCTCCTCAACGATCTTCATTACAGATTCATTAACCCCATTGATCTCTGAGCTTCTGTCCTTCAAACCCTTCAATTGACTCCTCTTACTCTCTGCAGCCACCCGATCAAAATCATCTCCCAGTTTCTTCACCAATCTCCTCTTCACAACCCCAATCTCTTCCTTTTCCATGCCAATATCGTCCTCATCTTCAAACAGAACCATCAATCGCCGTCTCTTGGTTGCAATCGGTGCCGGTGGTGGAGTTACAGATCTCGCCTTCTTCAATTGGCGATGGGCATCGGCTCCGGCATCTGGGTCAGATCTCTTTGGCGCGGAGTCAAGTTTTTGTGCTTTAAGCTTCTTCTTGGCAACCTTTCTCGCGCTCGGTTCGAAGTTTGTGAGCATTCG

Library


Library category	ESTs
fruit (8DPP) library	6
gynoecious flower library	4
hermaphrodite flower library	8

Homology

[Close]

BLAST of CU102221 vs. TrEMBL
Match: A0A0A0K3S4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G048030 PE=4 SV=1)

HSP 1 Score: 220.3 bits (560), Expect = 2.3e-54
Identity = 112/112 (100.00%), Postives = 112/112 (100.00%), Query Frame = -1


Query: 260 DSAPKRSDPDAGADAHRQLKKARSVTPPPAPIATKRRRLMVLFEDEDDIGMEKEEIGVVK 319
           DSAPKRSDPDAGADAHRQLKKARSVTPPPAPIATKRRRLMVLFEDEDDIGMEKEEIGVVK
Sbjct: 91  DSAPKRSDPDAGADAHRQLKKARSVTPPPAPIATKRRRLMVLFEDEDDIGMEKEEIGVVK 150

Query: 320 RRLVKKLGDDFDRVAAESKRSQLKGLKDRSSEINGVNESVMKIVEEINNENT 379
           RRLVKKLGDDFDRVAAESKRSQLKGLKDRSSEINGVNESVMKIVEEINNENT
Sbjct: 151 RRLVKKLGDDFDRVAAESKRSQLKGLKDRSSEINGVNESVMKIVEEINNENT 202

Query: 380  439
           
Sbjct: 211  202

Query: 440  499
           
Sbjct: 271  202

Query: 500  559
           
Sbjct: 331  202

Query: 560  596
           
Sbjct: 391  202

[Close]

BLAST of CU102221 vs. TrEMBL
Match: A0A0A0K3S4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G048030 PE=4 SV=1)

HSP 1 Score: 43.1 bits (100), Expect = 5.0e-01
Identity = 23/38 (60.53%), Postives = 23/38 (60.53%), Query Frame = -2


Query: 145 KVKKTNIERKGKTXXXXXXXXXXXXXXXPRLANKRALN 204
           KVKKTNIERKGKT               PRLANKRALN
Sbjct: 203 KVKKTNIERKGKTGGNVESVSVSGSRSSPRLANKRALN 240

Query: 205  259
           
Sbjct: 263  240

HSP 2 Score: 80.9 bits (198), Expect = 2.2e-12
Identity = 54/114 (47.37%), Postives = 70/114 (61.40%), Query Frame = -1


Query: 260 AHRQLKKARSVTPPPAPIATKRRRLMVLF-EDEDDIGMEKEE------IGVVKRRLVKKL 319
           + R++  +   +PPPAPIATKRRR M L  EDE+D   E+EE      + V +RRLVKKL
Sbjct: 104 SERKMVDSDEDSPPPAPIATKRRRFMDLIDEDEEDDAEEEEEEEKIRSLRVRRRRLVKKL 163

Query: 320 GDDFDRVAAESK---RSQLKGL------KDRSSEINGVNESVMKIVEEINNENT 379
           GDDFDRVA E++   RS  K L      + R  E N   E+VM +VEE+N  N+
Sbjct: 164 GDDFDRVAPENEKADRSPSKSLGNGSRTRRRILEDNEAIETVMNVVEEVNKMNS 217

Query: 380  439
           
Sbjct: 224  217

Query: 440  499
           
Sbjct: 284  217

Query: 500  554
           
Sbjct: 344  217

[Close]

BLAST of CU102221 vs. TrEMBL
Match: A0A151SF68_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_024769 PE=4 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 1.6e-10
Identity = 42/87 (48.28%), Postives = 54/87 (62.07%), Query Frame = -1


Query: 290 RQLKKARSVTPPPAPIATKRRRLMVLFE-DEDDIGMEKEEIGVVKRRLVKKLGDDFDRVA 349
           R  K+  S +PPPAP+  K RR M L E DE  +G E++E+ V K RLVKKLGD+FDRVA
Sbjct: 98  RGSKRVASPSPPPAPVVAKHRRFMDLIEEDEVVVGKEEDEVVVGKGRLVKKLGDEFDRVA 157

Query: 350 AESKRSQLKGLKDRSSEINGVNESVMK 409
           +E +RS     K R+  +    E V K
Sbjct: 158 SEKERSDATPFKTRTRRLVKGGEPVKK 184

Query: 410  469
           
Sbjct: 218  184

Query: 470  529
           
Sbjct: 278  184

Query: 530  548
           
Sbjct: 338  184

[Close]

BLAST of CU102221 vs. TrEMBL
Match: K7LW31_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 1.7e-09
Identity = 51/115 (44.35%), Postives = 66/115 (57.39%), Query Frame = -1


Query: 266 PDAGADAHRQLKKARSVTPPPAPIATKRRRLMVLFEDEDDIGMEKEEIGVVKRR------ 325
           P A AD  R  K+A S   PPAP+  KRRR M L ++E+    E+EE GVV RR      
Sbjct: 192 PPARADLRRS-KRAASPLTPPAPVMAKRRRYMDLIQEEE----EEEEEGVVVRRTSVRKS 251

Query: 326 -LVKKLGDDFDRVAAESKR----SQLKGLKDRSSEINGV--NESVMKIVEEINNE 385
            LVKKLGDDFDRVA E+      S LK  + R    NG   N++V+++ E+ N +
Sbjct: 252 GLVKKLGDDFDRVALENDESNTVSSLKTTRGRKLVKNGELGNKTVVEVAEKSNTK 301

Query: 386  445
           
Sbjct: 312  301

Query: 446  505
           
Sbjct: 372  301

Query: 506  565
           
Sbjct: 432  301

Query: 566  572
           
Sbjct: 492  301

[Close]

BLAST of CU102221 vs. TrEMBL
Match: A0A0R0H8I1_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_12G204600 PE=4 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 1.7e-09
Identity = 51/115 (44.35%), Postives = 66/115 (57.39%), Query Frame = -1


Query: 266 PDAGADAHRQLKKARSVTPPPAPIATKRRRLMVLFEDEDDIGMEKEEIGVVKRR------ 325
           P A AD  R  K+A S   PPAP+  KRRR M L ++E+    E+EE GVV RR      
Sbjct: 89  PPARADLRRS-KRAASPLTPPAPVMAKRRRYMDLIQEEE----EEEEEGVVVRRTSVRKS 148

Query: 326 -LVKKLGDDFDRVAAESKR----SQLKGLKDRSSEINGV--NESVMKIVEEINNE 385
            LVKKLGDDFDRVA E+      S LK  + R    NG   N++V+++ E+ N +
Sbjct: 149 GLVKKLGDDFDRVALENDESNTVSSLKTTRGRKLVKNGELGNKTVVEVAEKSNTK 198

Query: 386  445
           
Sbjct: 209  198

Query: 446  505
           
Sbjct: 269  198

Query: 506  565
           
Sbjct: 329  198

Query: 566  572
           
Sbjct: 389  198

[Close]

BLAST of CU102221 vs. NCBI nr
Match: gi|449438098|ref|XP_004136827.1| (PREDICTED: uncharacterized protein LOC101207471 [Cucumis sativus])

HSP 1 Score: 213.4 bits (542), Expect = 4.0e-52
Identity = 112/112 (100.00%), Postives = 112/112 (100.00%), Query Frame = -1


Query: 260 DSAPKRSDPDAGADAHRQLKKARSVTPPPAPIATKRRRLMVLFEDEDDIGMEKEEIGVVK 319
           DSAPKRSDPDAGADAHRQLKKARSVTPPPAPIATKRRRLMVLFEDEDDIGMEKEEIGVVK
Sbjct: 91  DSAPKRSDPDAGADAHRQLKKARSVTPPPAPIATKRRRLMVLFEDEDDIGMEKEEIGVVK 150

Query: 320 RRLVKKLGDDFDRVAAESKRSQLKGLKDRSSEINGVNESVMKIVEEINNENT 379
           RRLVKKLGDDFDRVAAESKRSQLKGLKDRSSEINGVNESVMKIVEEINNENT
Sbjct: 151 RRLVKKLGDDFDRVAAESKRSQLKGLKDRSSEINGVNESVMKIVEEINNENT 202

Query: 380  439
           
Sbjct: 211  202

Query: 440  499
           
Sbjct: 271  202

Query: 500  559
           
Sbjct: 331  202

Query: 560  596
           
Sbjct: 391  202

[Close]

BLAST of CU102221 vs. NCBI nr
Match: gi|659110606|ref|XP_008455314.1| (PREDICTED: uncharacterized protein LOC103495510 [Cucumis melo])

HSP 1 Score: 207.2 bits (526), Expect = 2.9e-50
Identity = 107/112 (95.54%), Postives = 111/112 (99.11%), Query Frame = -1


Query: 260 DSAPKRSDPDAGADAHRQLKKARSVTPPPAPIATKRRRLMVLFEDEDDIGMEKEEIGVVK 319
           DSAPKRSDPDAGADAHRQLKKARSVTPPPAP+ATKRRRLMVLFEDEDD+GM+KEEIGVVK
Sbjct: 91  DSAPKRSDPDAGADAHRQLKKARSVTPPPAPVATKRRRLMVLFEDEDDVGMDKEEIGVVK 150

Query: 320 RRLVKKLGDDFDRVAAESKRSQLKGLKDRSSEINGVNESVMKIVEEINNENT 379
           RRLVKKLGDDFDRVAAESKR+QLKGLKDRSSEIN VNESVMKIVEEINNENT
Sbjct: 151 RRLVKKLGDDFDRVAAESKRNQLKGLKDRSSEINEVNESVMKIVEEINNENT 202

Query: 380  439
           
Sbjct: 211  202

Query: 440  499
           
Sbjct: 271  202

Query: 500  559
           
Sbjct: 331  202

Query: 560  596
           
Sbjct: 391  202

[Close]

BLAST of CU102221 vs. NCBI nr
Match: gi|1009165334|ref|XP_015900977.1| (PREDICTED: uncharacterized protein LOC107434072 [Ziziphus jujuba])

HSP 1 Score: 81.3 bits (199), Expect = 2.4e-12
Identity = 54/114 (47.37%), Postives = 73/114 (64.04%), Query Frame = -1


Query: 275 KKARSVTPPPAPIATKRRRLMVLFEDEDDIGM-----EKEEIGV------VKRRLVKKLG 334
           K+A S++PP AP+ATKRRRLM L +++DD        E+EE+GV      VKRRLVK+L 
Sbjct: 102 KRAVSISPPAAPMATKRRRLMALIDEDDDDSSADEEEEEEEVGVVAPSRGVKRRLVKRLW 161

Query: 335 DDFDRVAAESKR---SQLKGLKD------------RSSEINGVNESVMKIVEEI 394
           DDFDRVA+E++R   S LKGL              ++ E + V E+VMK+VEE+
Sbjct: 162 DDFDRVASEAERGKGSPLKGLSGGSEGMASRTRSRKTEEDDEVTETVMKVVEEV 215

Query: 395  454
           
Sbjct: 222  215

Query: 455  514
           
Sbjct: 282  215

Query: 515  539
           
Sbjct: 342  215

[Close]

BLAST of CU102221 vs. NCBI nr
Match: gi|1009129728|ref|XP_015881923.1| (PREDICTED: uncharacterized protein LOC107417790 [Ziziphus jujuba])

HSP 1 Score: 81.3 bits (199), Expect = 2.4e-12
Identity = 54/114 (47.37%), Postives = 73/114 (64.04%), Query Frame = -1


Query: 275 KKARSVTPPPAPIATKRRRLMVLFEDEDDIGM-----EKEEIGV------VKRRLVKKLG 334
           K+A S++PP AP+ATKRRRLM L +++DD        E+EE+GV      VKRRLVK+L 
Sbjct: 102 KRAVSISPPAAPMATKRRRLMALIDEDDDDSSADEEEEEEEVGVVAPSRGVKRRLVKRLW 161

Query: 335 DDFDRVAAESKR---SQLKGLKD------------RSSEINGVNESVMKIVEEI 394
           DDFDRVA+E++R   S LKGL              ++ E + V E+VMK+VEE+
Sbjct: 162 DDFDRVASEAERGKGSPLKGLSGGSEGMASRTRSRKTEEDDEVTETVMKVVEEV 215

Query: 395  454
           
Sbjct: 222  215

Query: 455  514
           
Sbjct: 282  215

Query: 515  539
           
Sbjct: 342  215

[Close]

BLAST of CU102221 vs. NCBI nr
Match: gi|703073457|ref|XP_010089552.1| (hypothetical protein L484_004788 [Morus notabilis])

HSP 1 Score: 75.9 bits (185), Expect = 1.0e-10
Identity = 54/114 (47.37%), Postives = 70/114 (61.40%), Query Frame = -1


Query: 260 AHRQLKKARSVTPPPAPIATKRRRLMVLF-EDEDDIGMEKEE------IGVVKRRLVKKL 319
           + R++  +   +PPPAPIATKRRR M L  EDE+D   E+EE      + V +RRLVKKL
Sbjct: 104 SERKMVDSDEDSPPPAPIATKRRRFMDLIDEDEEDDAEEEEEEEKIRSLRVRRRRLVKKL 163

Query: 320 GDDFDRVAAESK---RSQLKGL------KDRSSEINGVNESVMKIVEEINNENT 379
           GDDFDRVA E++   RS  K L      + R  E N   E+VM +VEE+N  N+
Sbjct: 164 GDDFDRVAPENEKADRSPSKSLGNGSRTRRRILEDNEAIETVMNVVEEVNKMNS 217

Query: 380  439
           
Sbjct: 224  217

Query: 440  499
           
Sbjct: 284  217

Query: 500  554
           
Sbjct: 344  217

The following BLAST results are available for this feature:

BLAST of CU102221 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K3S4_CUCSA	2.3e-54	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G048030 PE=4 SV=1	[more]
A0A0A0K3S4_CUCSA	5.0e-01	60.53	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G048030 PE=4 SV=1	[more]
A0A151SF68_CAJCA	1.6e-10	48.28	Uncharacterized protein OS=Cajanus cajan GN=KK1_024769 PE=4 SV=1	[more]
K7LW31_SOYBN	1.7e-09	44.35	Uncharacterized protein OS=Glycine max PE=4 SV=1	[more]
A0A0R0H8I1_SOYBN	1.7e-09	44.35	Uncharacterized protein OS=Glycine max GN=GLYMA_12G204600 PE=4 SV=1	[more]

BLAST of CU102221 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449438098\|ref\|XP_004136827.1\|	4.0e-52	100.00	PREDICTED: uncharacterized protein LOC101207471 [Cucumis sativus]	[more]
gi\|659110606\|ref\|XP_008455314.1\|	2.9e-50	95.54	PREDICTED: uncharacterized protein LOC103495510 [Cucumis melo]	[more]
gi\|1009165334\|ref\|XP_015900977.1\|	2.4e-12	47.37	PREDICTED: uncharacterized protein LOC107434072 [Ziziphus jujuba]	[more]
gi\|1009129728\|ref\|XP_015881923.1\|	2.4e-12	47.37	PREDICTED: uncharacterized protein LOC107417790 [Ziziphus jujuba]	[more]
gi\|703073457\|ref\|XP_010089552.1\|	1.0e-10	47.37	hypothetical protein L484_004788 [Morus notabilis]	[more]

Relationships

This transcribed_cluster is associated with the following gene feature(s):


Feature Name	Unique Name	Type
Csa7G048030	Csa7G048030	gene

The following EST feature(s) are a part of this transcribed_cluster:


Feature Name	Unique Name	Type
FKNP3UI02LAPCS	FKNP3UI02LAPCS	EST
FKNP3UI02LRKQP	FKNP3UI02LRKQP	EST
FKNP3UI02LTN15	FKNP3UI02LTN15	EST
FKNP3UI02MXOCQ	FKNP3UI02MXOCQ	EST
FKNP3UI02NSCQR	FKNP3UI02NSCQR	EST
FKNP3UI02OJJDB	FKNP3UI02OJJDB	EST
G0006109	G0006109	EST
G0092313	G0092313	EST
G0123744	G0123744	EST
G0180482	G0180482	EST
H0035495	H0035495	EST
H0047839	H0047839	EST
H0063624	H0063624	EST
H0067160	H0067160	EST
H0074425	H0074425	EST
H0083403	H0083403	EST
H0104985	H0104985	EST
H0149598	H0149598	EST