CU145794 (transcribed_cluster) Cucumber (Chinese Long) v2

NameCU145794
Typetranscribed_cluster
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr7 : 2986099 .. 2986337 (-)
Sequence length244
The following sequences are available for this feature:

transcribed_cluster sequence

ATGCCAATATCGTCCTCATCTTTCTAAACAGAACCATCAATCGCCGTCTCTTGGTTGCAATCGGTGCCGGTGGTGGAGTTACAGATCTCGCCTTCTTCAATTGGCGATGGGCATCGGCTCCGGCATCTGGGTCAGATCTCTTTGGCGCAGAGTCAAGTTTTTTGTGCTTTTAAGCTTCTTCTTGGCAACCTTCTCGCGCTCGGTTCGAAGTTTTGTGAACATTTGCCTTCGATCCGACCTTGAA
Library categoryESTs
gynoecious flower library1
BLAST of CU145794 vs. TrEMBL
Match: A0A0A0K3S4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G048030 PE=4 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 2.2e-18
Identity = 52/68 (76.47%), Postives = 56/68 (82.35%), Query Frame = -1

Query: 26  KANVHKTSNRAREGCQEEA*KHKKLDSAPKRSDPDAGADAHRQLKKARSVTPPPAPIATK 85
           + NVHK     RE   ++  K +KLDSAPKRSDPDAGADAHRQLKKARSVTPPPAPIATK
Sbjct: 67  EGNVHKLRTE-REKVAKKKLKAQKLDSAPKRSDPDAGADAHRQLKKARSVTPPPAPIATK 126

Query: 86  RRRLMVLF 145
           RRRLMVLF
Sbjct: 127 RRRLMVLF 133

Query: 146 205
           
Sbjct: 187 133

Query: 206 230
           
Sbjct: 247 133

BLAST of CU145794 vs. NCBI nr
Match: gi|449438098|ref|XP_004136827.1| (PREDICTED: uncharacterized protein LOC101207471 [Cucumis sativus])

HSP 1 Score: 92.4 bits (228), Expect = 3.8e-16
Identity = 52/68 (76.47%), Postives = 56/68 (82.35%), Query Frame = -1

Query: 26  KANVHKTSNRAREGCQEEA*KHKKLDSAPKRSDPDAGADAHRQLKKARSVTPPPAPIATK 85
           + NVHK     RE   ++  K +KLDSAPKRSDPDAGADAHRQLKKARSVTPPPAPIATK
Sbjct: 67  EGNVHKLRTE-REKVAKKKLKAQKLDSAPKRSDPDAGADAHRQLKKARSVTPPPAPIATK 126

Query: 86  RRRLMVLF 145
           RRRLMVLF
Sbjct: 127 RRRLMVLF 133

Query: 146 205
           
Sbjct: 187 133

Query: 206 230
           
Sbjct: 247 133

BLAST of CU145794 vs. NCBI nr
Match: gi|659110606|ref|XP_008455314.1| (PREDICTED: uncharacterized protein LOC103495510 [Cucumis melo])

HSP 1 Score: 90.9 bits (224), Expect = 1.1e-15
Identity = 51/68 (75.00%), Postives = 56/68 (82.35%), Query Frame = -1

Query: 26  KANVHKTSNRAREGCQEEA*KHKKLDSAPKRSDPDAGADAHRQLKKARSVTPPPAPIATK 85
           + NVHK     RE   ++  K +KLDSAPKRSDPDAGADAHRQLKKARSVTPPPAP+ATK
Sbjct: 67  EGNVHKLRVE-REKVAKKKLKAEKLDSAPKRSDPDAGADAHRQLKKARSVTPPPAPVATK 126

Query: 86  RRRLMVLF 145
           RRRLMVLF
Sbjct: 127 RRRLMVLF 133

Query: 146 205
           
Sbjct: 187 133

Query: 206 230
           
Sbjct: 247 133

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0K3S4_CUCSA2.2e-1876.47Uncharacterized protein OS=Cucumis sativus GN=Csa_7G048030 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|449438098|ref|XP_004136827.1|3.8e-1676.47PREDICTED: uncharacterized protein LOC101207471 [Cucumis sativus][more]
gi|659110606|ref|XP_008455314.1|1.1e-1575.00PREDICTED: uncharacterized protein LOC103495510 [Cucumis melo][more]

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Csa7G048030Csa7G048030gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
G0132100G0132100EST