Cp4.1LG04g03090 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG04g03090
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionMicrotubule-associated protein 6, putative
LocationCp4.1LG04 : 7444398 .. 7445084 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTTGTTCCTCTCGGACCCGGCAAGTTCTACGGCAGCAGTCTCCCCCGTCCCCGCTACTACACCGACGTCAAGTTCAACGATGAGCGTGTCGATCCACCCACGCCGGTCCTCGATCCGCTTCTCTCATGGGCGAACGAGGCTCACTGGTCAATGGGAGGTCTCAGCTTCAATCGCCTGAGACTTCAGGGTCGAATCGAAGGCAATATCAACAAGCTTCGAACTGAGCGTGAGAAGATTGCTAAGAAGAAGAAAGTAGAGACGCCAGAGAGATCTGACTCAGATCTCAGAGACGATGCTGTTCGCCGGTCGAAGAAGTCGAAATCAGTATCACCACCGCCAGTGCCAATTGCAACTAAGAGACGGCGATTGATGCCATTGTTTGACGCTGAGGAGGATGATGTTGGTGAGCACAAGGAAGAAATTAGGGTTGTGAAGAGGAGATTGGTGAAGAAGCTGGGAGATGATTTCGATCGAGTCGCTGTGGAGGGGAAGAAGAACCAGTTGAAAGGTTCGAGGGATCGAAATTTGGAAGTCAATGGGATCGATGAATCTGTAATGAAGATTGTTGAGGAGATTAACGATCAAAGTACAAAGGGGAAGAGTAGTGGAAAAAAACTGGAAAATGATTCAATTTCTGCCACTAGAACTTCTCCCAGATTAGCTAATAAGCGTAGATCAAATTGA

mRNA sequence

ATGGTTGTTCCTCTCGGACCCGGCAAGTTCTACGGCAGCAGTCTCCCCCGTCCCCGCTACTACACCGACGTCAAGTTCAACGATGAGCGTGTCGATCCACCCACGCCGGTCCTCGATCCGCTTCTCTCATGGGCGAACGAGGCTCACTGGTCAATGGGAGGTCTCAGCTTCAATCGCCTGAGACTTCAGGGTCGAATCGAAGGCAATATCAACAAGCTTCGAACTGAGCGTGAGAAGATTGCTAAGAAGAAGAAAGTAGAGACGCCAGAGAGATCTGACTCAGATCTCAGAGACGATGCTGTTCGCCGGTCGAAGAAGTCGAAATCAGTATCACCACCGCCAGTGCCAATTGCAACTAAGAGACGGCGATTGATGCCATTGTTTGACGCTGAGGAGGATGATGTTGGTGAGCACAAGGAAGAAATTAGGGTTGTGAAGAGGAGATTGGTGAAGAAGCTGGGAGATGATTTCGATCGAGTCGCTGTGGAGGGGAAGAAGAACCAGTTGAAAGGTTCGAGGGATCGAAATTTGGAAGTCAATGGGATCGATGAATCTGTAATGAAGATTGTTGAGGAGATTAACGATCAAAGTACAAAGGGGAAGAGTAGTGGAAAAAAACTGGAAAATGATTCAATTTCTGCCACTAGAACTTCTCCCAGATTAGCTAATAAGCGTAGATCAAATTGA

Coding sequence (CDS)

ATGGTTGTTCCTCTCGGACCCGGCAAGTTCTACGGCAGCAGTCTCCCCCGTCCCCGCTACTACACCGACGTCAAGTTCAACGATGAGCGTGTCGATCCACCCACGCCGGTCCTCGATCCGCTTCTCTCATGGGCGAACGAGGCTCACTGGTCAATGGGAGGTCTCAGCTTCAATCGCCTGAGACTTCAGGGTCGAATCGAAGGCAATATCAACAAGCTTCGAACTGAGCGTGAGAAGATTGCTAAGAAGAAGAAAGTAGAGACGCCAGAGAGATCTGACTCAGATCTCAGAGACGATGCTGTTCGCCGGTCGAAGAAGTCGAAATCAGTATCACCACCGCCAGTGCCAATTGCAACTAAGAGACGGCGATTGATGCCATTGTTTGACGCTGAGGAGGATGATGTTGGTGAGCACAAGGAAGAAATTAGGGTTGTGAAGAGGAGATTGGTGAAGAAGCTGGGAGATGATTTCGATCGAGTCGCTGTGGAGGGGAAGAAGAACCAGTTGAAAGGTTCGAGGGATCGAAATTTGGAAGTCAATGGGATCGATGAATCTGTAATGAAGATTGTTGAGGAGATTAACGATCAAAGTACAAAGGGGAAGAGTAGTGGAAAAAAACTGGAAAATGATTCAATTTCTGCCACTAGAACTTCTCCCAGATTAGCTAATAAGCGTAGATCAAATTGA

Protein sequence

MVVPLGPGKFYGSSLPRPRYYTDVKFNDERVDPPTPVLDPLLSWANEAHWSMGGLSFNRLRLQGRIEGNINKLRTEREKIAKKKKVETPERSDSDLRDDAVRRSKKSKSVSPPPVPIATKRRRLMPLFDAEEDDVGEHKEEIRVVKRRLVKKLGDDFDRVAVEGKKNQLKGSRDRNLEVNGIDESVMKIVEEINDQSTKGKSSGKKLENDSISATRTSPRLANKRRSN
Homology
[Close]
BLAST of Cp4.1LG04g03090 vs. TrEMBL
Match: A0A0A0K3S4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G048030 PE=4 SV=1)

HSP 1 Score: 321.2 bits (822), Expect = 9.9e-85
Identity = 173/241 (71.78%), Postives = 204/241 (84.65%), Query Frame = 1 

Query: 1   MVVPLGPGKFYGSSLPRPRYYTDVKFNDERVDPPTPVLDPLLSWANEAHWSMGGLSFNRL 60
           MVVPLGPGKFYGSSLPRPRYY+DVKFNDERVDPPTPVLDPLLSWANEAHWSMGGLSFNRL
Sbjct: 1   MVVPLGPGKFYGSSLPRPRYYSDVKFNDERVDPPTPVLDPLLSWANEAHWSMGGLSFNRL 60

Query: 61  RLQGRIEGNINKLRTEREKIAKKK----KVET-PERSDSDLRDDAVRRSKKSKSVSPPPV 120
           RLQGRIEGN++KLRTEREK+AKKK    K+++ P+RSD D   DA R+ KK++SV+PPP 
Sbjct: 61  RLQGRIEGNVHKLRTEREKVAKKKLKAQKLDSAPKRSDPDAGADAHRQLKKARSVTPPPA 120

Query: 121 PIATKRRRLMPLFDAEEDDVGEHKEEIRVVKRRLVKKLGDDFDRVAVEGKKNQLKGSRDR 180
           PIATKRRRLM LF+ +EDD+G  KEEI VVKRRLVKKLGDDFDRVA E K++QLKG +DR
Sbjct: 121 PIATKRRRLMVLFE-DEDDIGMEKEEIGVVKRRLVKKLGDDFDRVAAESKRSQLKGLKDR 180

Query: 181 NLEVNGIDESVMKIVEEINDQSTKGK--------SSGKKLENDSISATRTSPRLANKRRS 229
           + E+NG++ESVMKIVEEIN+++TK K         +G  +E+ S+S +R+SPRLANKR  
Sbjct: 181 SSEINGVNESVMKIVEEINNENTKVKKTNIERKGKTGGNVESVSVSGSRSSPRLANKRAL 240

[Close]
BLAST of Cp4.1LG04g03090 vs. TrEMBL
Match: W9R4I2_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_004788 PE=4 SV=1)

HSP 1 Score: 229.2 bits (583), Expect = 5.1e-57
Identity = 141/251 (56.18%), Postives = 166/251 (66.14%), Query Frame = 1 

Query: 1   MVVPLGPGKFYGSSLPRPRYYTDVKFNDERVDPPTPVLDPLLSWANEAHWSMGGLSFNRL 60
           M+V LGPGKFYG+SLPRPR+YTDVKFNDERVDPPTPVLDPLLSWANEAHWSMGGLSF RL
Sbjct: 1   MMVSLGPGKFYGTSLPRPRFYTDVKFNDERVDPPTPVLDPLLSWANEAHWSMGGLSFKRL 60

Query: 61  RLQGRIEGNINKLRTEREKIAKKKKVETPERSDSDLR-DDAVRRSKK---SKSVSPPPVP 120
           R QGRIEG+++KLR EREK+ +K+K E  + + S     D V   +K   S   SPPP P
Sbjct: 61  RFQGRIEGSVSKLRAEREKLERKRKKEGKQTAGSSSNGSDLVGSERKMVDSDEDSPPPAP 120

Query: 121 IATKRRRLMPLFDAEEDDVGEHKEE------IRVVKRRLVKKLGDDFDRVAVEGKKNQL- 180
           IATKRRR M L D +E+D  E +EE      +RV +RRLVKKLGDDFDRVA E +K    
Sbjct: 121 IATKRRRFMDLIDEDEEDDAEEEEEEEKIRSLRVRRRRLVKKLGDDFDRVAPENEKADRS 180

Query: 181 ------KGSRDRN--LEVNGIDESVMKIVEEINDQSTKGKSS------GKKL--ENDSIS 225
                  GSR R   LE N   E+VM +VEE+N  ++ GK S      GK         +
Sbjct: 181 PSKSLGNGSRTRRRILEDNEAIETVMNVVEEVNKMNSMGKKSKGSGNKGKAAGGSESPPA 240

[Close]
BLAST of Cp4.1LG04g03090 vs. TrEMBL
Match: A0A061EAW7_THECC (Microtubule-associated protein 6, putative OS=Theobroma cacao GN=TCM_008115 PE=4 SV=1)

HSP 1 Score: 220.7 bits (561), Expect = 1.8e-54
Identity = 131/246 (53.25%), Postives = 162/246 (65.85%), Query Frame = 1 

Query: 1   MVVPLGPGKFYGSSLPRPRYYTDVKFNDERVDPPTPVLDPLLSWANEAHWSMGGLSFNRL 60
           MVVPLGPGKFYGSSLPRPR YTD KFN +RVDPP PVLDPLLSWANEAHWSMGGLSF RL
Sbjct: 1   MVVPLGPGKFYGSSLPRPRIYTDTKFNSDRVDPPLPVLDPLLSWANEAHWSMGGLSFKRL 60

Query: 61  RLQGRIEGNINKLRTEREKIAKKKKVETPERSDSDLRDDAVRRSKKSKSVSPPPVPIATK 120
           RLQGRIEGN+ +L+ +REK+ K          DS  +   ++++K+  SVSPPP P+A K
Sbjct: 61  RLQGRIEGNVKRLKAQREKLVK----------DSPDKAHIIKKNKRDASVSPPPAPVAVK 120

Query: 121 RRRLMPLFD-----AEEDDVGEHKEEIRVVKRRLVKKLGDDFDRVAVEGKKNQLKGSRDR 180
           RRR + L D      EED++ E +EE RV+++   +KLGDDF+RVA  G        R+R
Sbjct: 121 RRRFLDLNDDDESENEEDEMVEEREEKRVLRKGAARKLGDDFERVASNG---VAVSKRER 180

Query: 181 NLEVNGIDESVMKIVEEINDQS----------TKGKSSGKKLENDSI---SATRTSPRLA 229
           +   +GI   VM IVEE+N +S           K KS  K L+N  +   S TRTSPRLA
Sbjct: 181 SFS-DGIGVDVMNIVEEVNMESEFQGDKKKKKKKKKSIEKGLKNGKVEGQSGTRTSPRLA 232

[Close]
BLAST of Cp4.1LG04g03090 vs. TrEMBL
Match: A0A0D2VYT4_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_012G128300 PE=4 SV=1)

HSP 1 Score: 210.7 bits (535), Expect = 1.9e-51
Identity = 129/240 (53.75%), Postives = 158/240 (65.83%), Query Frame = 1 

Query: 1   MVVPLGPGKFYGSSLPRPRYYTDVKFNDERVDPPTPVLDPLLSWANEAHWSMGGLSFNRL 60
           MVV LGPGKFYGSSLPRPR YTD KFN ERVDPP PVLDPLLSWA+EAHWSMGGLSF RL
Sbjct: 72  MVVSLGPGKFYGSSLPRPRIYTDTKFNPERVDPPVPVLDPLLSWADEAHWSMGGLSFKRL 131

Query: 61  RLQGRIEGNINKLRTEREKIAKKKKVETPERS---DSDLRDDAVRRSKKSKSVSPPPVPI 120
           RLQGRIEGN+ +L+ +R+K+ K    +TP+R       LRDD     +  + VSPPP P+
Sbjct: 132 RLQGRIEGNVKRLKAQRKKLLK----DTPDRGLNLKKSLRDD-----EDDEDVSPPPAPV 191

Query: 121 ATKRRRLMPL---FDAEEDDVGEHKEEIRVVKRR--------LVKKLGDDFDRVAVEGKK 180
           A KRRR + L    D E ++ G+  EE+ V KR+         V+KLGDDF+RVA   K 
Sbjct: 192 AVKRRRFLDLNDDDDTESENKGDDDEEVTVAKRKKKRVLRNGAVRKLGDDFERVA---KN 251

Query: 181 NQLKGSRDRNLEVNGIDESVMKIVEEINDQSTKGKSSGKKLENDSISATRTSPRLANKRR 227
           + L   R RN   +GI   V K+VEE+ND+  + +   KK E  S   +RTSPRLA + R
Sbjct: 252 SGLVSKRGRNFS-DGIGSDVKKMVEEVNDE-PESEEDKKKTEAQS-GRSRTSPRLARRGR 296

[Close]
BLAST of Cp4.1LG04g03090 vs. TrEMBL
Match: B9RVZ1_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1174260 PE=4 SV=1)

HSP 1 Score: 210.3 bits (534), Expect = 2.5e-51
Identity = 123/236 (52.12%), Postives = 156/236 (66.10%), Query Frame = 1 

Query: 1   MVVPLGPGKFYGSSLPRPRYYTDVKFNDERVDPPTPVLDPLLSWANEAHWSMGGLSFNRL 60
           MVVPLGPGKFYGSSLPRPR YTDVKFN +RVDPP PV DP LSWA EAHWSMGG SF RL
Sbjct: 1   MVVPLGPGKFYGSSLPRPRIYTDVKFNSDRVDPPVPVTDPFLSWAQEAHWSMGGHSFQRL 60

Query: 61  RLQGRIEGNINKLRTEREKIAKKKKVETPERSDSDLRDDAVRRSKKSKSVSPPPVPIATK 120
           RLQGRIEG++NKLR  REK AK +   +P    S+ ++D     K+  S SPPP P   K
Sbjct: 61  RLQGRIEGSVNKLRKFREKEAKLQARNSPA---SNKKND---NGKRVGSASPPPAPKVIK 120

Query: 121 RRRLMPLFDAEEDDVGEHKEEIRVVKRRLVKKLGDDFDRVAVEGKKNQLKGSRDRNLEVN 180
           RRR M L D E ++  E +   +V K++ V+KL  DF++VA E  +N+ K S        
Sbjct: 121 RRRFMDLMDEESEEEEEEEIVEKVKKKKSVRKLVGDFEKVATESVENKGKAS-------G 180

Query: 181 GIDESVMKIVEEINDQSTKGK--------SSGKKLENDSISATRTSPRLANKRRSN 229
           GID++VMK+VEE+N +++ GK         S K+  +  ++  RTSPRLA +R S+
Sbjct: 181 GIDDAVMKVVEEVNRENSVGKKLRRGKKGKSNKENGSSPVNGVRTSPRLAKQRSSH 223

[Close]
BLAST of Cp4.1LG04g03090 vs. TAIR10
Match: AT4G28310.1 (AT4G28310.1 unknown protein)

HSP 1 Score: 162.2 bits (409), Expect = 3.9e-40
Identity = 100/226 (44.25%), Postives = 143/226 (63.27%), Query Frame = 1 

Query: 3   VPLGPGKFYGSSLPRPRYYTDVKFNDERVDPPTPVLDPLLSWANEAHWSMGGLSFNRLRL 62
           + + P  FYG+ LPRPR++ + KFND RVDPP  VLDPLLSWA +AHWSMGGL+F RLRL
Sbjct: 9   IAIRPVSFYGNGLPRPRFFDNPKFNDYRVDPPLSVLDPLLSWARDAHWSMGGLNFTRLRL 68

Query: 63  QGRIEGNINKLRTEREKIAKKKKVETPERSDSDLRDDAVRRSKKSKSVSPPPVPIATKRR 122
           QGRIEGN+NKLR + EK        TP + +S       R+ K+S S SPP  PI  KRR
Sbjct: 69  QGRIEGNVNKLRAQLEK-------STPVKLESG------RKKKRSGSESPPSAPIVVKRR 128

Query: 123 RLMPLFDAEEDDVGEHKEEIRVVKRRLVKKLGDDFDRVAVEGKKNQLKGSRDRNLEVNGI 182
           R + L D+++++VG   E +  ++R    KL DDFDRVA E K   ++ ++ ++++   +
Sbjct: 129 RYLDLNDSDDEEVGSEDEGVVRIRR----KLSDDFDRVAEESKTKLVEANK-KSIKSEFV 188

Query: 183 DESVMKIVEEINDQSTKGKSSGKKLENDSISATRTSPRLANKRRSN 229
           ++   +++E+            K ++ +  S+TR+SPRLA KR SN
Sbjct: 189 EKK--RLIEK-----------KKIVKVNKTSSTRSSPRLA-KRSSN 202

[Close]
BLAST of Cp4.1LG04g03090 vs. TAIR10
Match: AT1G52270.1 (AT1G52270.1 unknown protein)

HSP 1 Score: 53.9 bits (128), Expect = 1.5e-07
Identity = 23/39 (58.97%), Postives = 28/39 (71.79%), Query Frame = 1 

Query: 7  PGKFYGSSLPRPRYYTDVKFNDERVDPPTPVLDPLLSWA 46
          P  FY + LPRPR++ + +FN  RVD P  VLDPLLSWA
Sbjct: 13 PVAFYRNGLPRPRFFDNHRFNSYRVDTPLSVLDPLLSWA 51

[Close]
BLAST of Cp4.1LG04g03090 vs. NCBI nr
Match: gi|449438098|ref|XP_004136827.1| (PREDICTED: uncharacterized protein LOC101207471 [Cucumis sativus])

HSP 1 Score: 321.2 bits (822), Expect = 1.4e-84
Identity = 173/241 (71.78%), Postives = 204/241 (84.65%), Query Frame = 1 

Query: 1   MVVPLGPGKFYGSSLPRPRYYTDVKFNDERVDPPTPVLDPLLSWANEAHWSMGGLSFNRL 60
           MVVPLGPGKFYGSSLPRPRYY+DVKFNDERVDPPTPVLDPLLSWANEAHWSMGGLSFNRL
Sbjct: 1   MVVPLGPGKFYGSSLPRPRYYSDVKFNDERVDPPTPVLDPLLSWANEAHWSMGGLSFNRL 60

Query: 61  RLQGRIEGNINKLRTEREKIAKKK----KVET-PERSDSDLRDDAVRRSKKSKSVSPPPV 120
           RLQGRIEGN++KLRTEREK+AKKK    K+++ P+RSD D   DA R+ KK++SV+PPP 
Sbjct: 61  RLQGRIEGNVHKLRTEREKVAKKKLKAQKLDSAPKRSDPDAGADAHRQLKKARSVTPPPA 120

Query: 121 PIATKRRRLMPLFDAEEDDVGEHKEEIRVVKRRLVKKLGDDFDRVAVEGKKNQLKGSRDR 180
           PIATKRRRLM LF+ +EDD+G  KEEI VVKRRLVKKLGDDFDRVA E K++QLKG +DR
Sbjct: 121 PIATKRRRLMVLFE-DEDDIGMEKEEIGVVKRRLVKKLGDDFDRVAAESKRSQLKGLKDR 180

Query: 181 NLEVNGIDESVMKIVEEINDQSTKGK--------SSGKKLENDSISATRTSPRLANKRRS 229
           + E+NG++ESVMKIVEEIN+++TK K         +G  +E+ S+S +R+SPRLANKR  
Sbjct: 181 SSEINGVNESVMKIVEEINNENTKVKKTNIERKGKTGGNVESVSVSGSRSSPRLANKRAL 240

[Close]
BLAST of Cp4.1LG04g03090 vs. NCBI nr
Match: gi|659110606|ref|XP_008455314.1| (PREDICTED: uncharacterized protein LOC103495510 [Cucumis melo])

HSP 1 Score: 321.2 bits (822), Expect = 1.4e-84
Identity = 176/239 (73.64%), Postives = 200/239 (83.68%), Query Frame = 1 

Query: 1   MVVPLGPGKFYGSSLPRPRYYTDVKFNDERVDPPTPVLDPLLSWANEAHWSMGGLSFNRL 60
           MVVPLGPGKFYGSSLPRPRYYTDVK NDERVDPPTPVLDPLLSWANEAHWSMGGLSFNRL
Sbjct: 1   MVVPLGPGKFYGSSLPRPRYYTDVKLNDERVDPPTPVLDPLLSWANEAHWSMGGLSFNRL 60

Query: 61  RLQGRIEGNINKLRTEREKIAKKK-KVE----TPERSDSDLRDDAVRRSKKSKSVSPPPV 120
           RLQGRIEGN++KLR EREK+AKKK K E     P+RSD D   DA R+ KK++SV+PPP 
Sbjct: 61  RLQGRIEGNVHKLRVEREKVAKKKLKAEKLDSAPKRSDPDAGADAHRQLKKARSVTPPPA 120

Query: 121 PIATKRRRLMPLFDAEEDDVGEHKEEIRVVKRRLVKKLGDDFDRVAVEGKKNQLKGSRDR 180
           P+ATKRRRLM LF+ +EDDVG  KEEI VVKRRLVKKLGDDFDRVA E K+NQLKG +DR
Sbjct: 121 PVATKRRRLMVLFE-DEDDVGMDKEEIGVVKRRLVKKLGDDFDRVAAESKRNQLKGLKDR 180

Query: 181 NLEVNGIDESVMKIVEEINDQST---------KGKSSGKKLENDSISATRTSPRLANKR 226
           + E+N ++ESVMKIVEEIN+++T         KGK+ G K+E+ S+S TRTSPRLANKR
Sbjct: 181 SSEINEVNESVMKIVEEINNENTKVKEINIEKKGKTVG-KVESVSVSGTRTSPRLANKR 237

[Close]
BLAST of Cp4.1LG04g03090 vs. NCBI nr
Match: gi|703073457|ref|XP_010089552.1| (hypothetical protein L484_004788 [Morus notabilis])

HSP 1 Score: 229.2 bits (583), Expect = 7.3e-57
Identity = 141/251 (56.18%), Postives = 166/251 (66.14%), Query Frame = 1 

Query: 1   MVVPLGPGKFYGSSLPRPRYYTDVKFNDERVDPPTPVLDPLLSWANEAHWSMGGLSFNRL 60
           M+V LGPGKFYG+SLPRPR+YTDVKFNDERVDPPTPVLDPLLSWANEAHWSMGGLSF RL
Sbjct: 1   MMVSLGPGKFYGTSLPRPRFYTDVKFNDERVDPPTPVLDPLLSWANEAHWSMGGLSFKRL 60

Query: 61  RLQGRIEGNINKLRTEREKIAKKKKVETPERSDSDLR-DDAVRRSKK---SKSVSPPPVP 120
           R QGRIEG+++KLR EREK+ +K+K E  + + S     D V   +K   S   SPPP P
Sbjct: 61  RFQGRIEGSVSKLRAEREKLERKRKKEGKQTAGSSSNGSDLVGSERKMVDSDEDSPPPAP 120

Query: 121 IATKRRRLMPLFDAEEDDVGEHKEE------IRVVKRRLVKKLGDDFDRVAVEGKKNQL- 180
           IATKRRR M L D +E+D  E +EE      +RV +RRLVKKLGDDFDRVA E +K    
Sbjct: 121 IATKRRRFMDLIDEDEEDDAEEEEEEEKIRSLRVRRRRLVKKLGDDFDRVAPENEKADRS 180

Query: 181 ------KGSRDRN--LEVNGIDESVMKIVEEINDQSTKGKSS------GKKL--ENDSIS 225
                  GSR R   LE N   E+VM +VEE+N  ++ GK S      GK         +
Sbjct: 181 PSKSLGNGSRTRRRILEDNEAIETVMNVVEEVNKMNSMGKKSKGSGNKGKAAGGSESPPA 240

[Close]
BLAST of Cp4.1LG04g03090 vs. NCBI nr
Match: gi|1009165334|ref|XP_015900977.1| (PREDICTED: uncharacterized protein LOC107434072 [Ziziphus jujuba])

HSP 1 Score: 224.6 bits (571), Expect = 1.8e-55
Identity = 140/258 (54.26%), Postives = 171/258 (66.28%), Query Frame = 1 

Query: 1   MVVPLGPGKFYGSSLPRPRYYTDVKFNDERVDPPTPVLDPLLSWANEAHWSMGGLSFNRL 60
           MVVPLGPGKFYG+SLPRPR YTDVK NDERVDPP PVLDP LSWA+EAHWSMGGLSF RL
Sbjct: 1   MVVPLGPGKFYGTSLPRPRIYTDVKLNDERVDPPVPVLDPFLSWASEAHWSMGGLSFKRL 60

Query: 61  RLQGRIEGNINKLRTEREKIAKKKKVETPERSDSDLRDDAVRRSKKSKSVSPPPVPIATK 120
           RLQGRIEG++ KL+ EREK AK+ K+ T     S     ++  SK++ S+SPP  P+ATK
Sbjct: 61  RLQGRIEGSVKKLQAEREKFAKRSKIVTGSSIGS---GSSMSDSKRAVSISPPAAPMATK 120

Query: 121 RRRLMPLFDAEEDDVG----EHKEEI------RVVKRRLVKKLGDDFDRVAVE---GKKN 180
           RRRLM L D ++DD      E +EE+      R VKRRLVK+L DDFDRVA E   GK +
Sbjct: 121 RRRLMALIDEDDDDSSADEEEEEEEVGVVAPSRGVKRRLVKRLWDDFDRVASEAERGKGS 180

Query: 181 QLKG---------SRDRNL---EVNGIDESVMKIVEEINDQSTKG---KSSGKKLEND-- 225
            LKG         SR R+    E + + E+VMK+VEE+   + KG   K  G K + +  
Sbjct: 181 PLKGLSGGSEGMASRTRSRKTEEDDEVTETVMKVVEEVKMSTHKGKRVKGGGSKGQGNGG 240

[Close]
BLAST of Cp4.1LG04g03090 vs. NCBI nr
Match: gi|590690781|ref|XP_007043602.1| (Microtubule-associated protein 6, putative [Theobroma cacao])

HSP 1 Score: 220.7 bits (561), Expect = 2.6e-54
Identity = 131/246 (53.25%), Postives = 162/246 (65.85%), Query Frame = 1 

Query: 1   MVVPLGPGKFYGSSLPRPRYYTDVKFNDERVDPPTPVLDPLLSWANEAHWSMGGLSFNRL 60
           MVVPLGPGKFYGSSLPRPR YTD KFN +RVDPP PVLDPLLSWANEAHWSMGGLSF RL
Sbjct: 1   MVVPLGPGKFYGSSLPRPRIYTDTKFNSDRVDPPLPVLDPLLSWANEAHWSMGGLSFKRL 60

Query: 61  RLQGRIEGNINKLRTEREKIAKKKKVETPERSDSDLRDDAVRRSKKSKSVSPPPVPIATK 120
           RLQGRIEGN+ +L+ +REK+ K          DS  +   ++++K+  SVSPPP P+A K
Sbjct: 61  RLQGRIEGNVKRLKAQREKLVK----------DSPDKAHIIKKNKRDASVSPPPAPVAVK 120

Query: 121 RRRLMPLFD-----AEEDDVGEHKEEIRVVKRRLVKKLGDDFDRVAVEGKKNQLKGSRDR 180
           RRR + L D      EED++ E +EE RV+++   +KLGDDF+RVA  G        R+R
Sbjct: 121 RRRFLDLNDDDESENEEDEMVEEREEKRVLRKGAARKLGDDFERVASNG---VAVSKRER 180

Query: 181 NLEVNGIDESVMKIVEEINDQS----------TKGKSSGKKLENDSI---SATRTSPRLA 229
           +   +GI   VM IVEE+N +S           K KS  K L+N  +   S TRTSPRLA
Sbjct: 181 SFS-DGIGVDVMNIVEEVNMESEFQGDKKKKKKKKKSIEKGLKNGKVEGQSGTRTSPRLA 232

The following BLAST results are available for this feature:
BLAST of Cp4.1LG04g03090 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG04g03090 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K3S4_CUCSA9.9e-8571.78Uncharacterized protein OS=Cucumis sativus GN=Csa_7G048030 PE=4 SV=1[more]
W9R4I2_9ROSA5.1e-5756.18Uncharacterized protein OS=Morus notabilis GN=L484_004788 PE=4 SV=1[more]
A0A061EAW7_THECC1.8e-5453.25Microtubule-associated protein 6, putative OS=Theobroma cacao GN=TCM_008115 PE=4... [more]
A0A0D2VYT4_GOSRA1.9e-5153.75Uncharacterized protein OS=Gossypium raimondii GN=B456_012G128300 PE=4 SV=1[more]
B9RVZ1_RICCO2.5e-5152.12Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1174260 PE=4 SV=1[more]
BLAST of Cp4.1LG04g03090 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G28310.13.9e-4044.25 unknown protein[more]
AT1G52270.11.5e-0758.97 unknown protein[more]
BLAST of Cp4.1LG04g03090 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449438098|ref|XP_004136827.1|1.4e-8471.78PREDICTED: uncharacterized protein LOC101207471 [Cucumis sativus][more]
gi|659110606|ref|XP_008455314.1|1.4e-8473.64PREDICTED: uncharacterized protein LOC103495510 [Cucumis melo][more]
gi|703073457|ref|XP_010089552.1|7.3e-5756.18hypothetical protein L484_004788 [Morus notabilis][more]
gi|1009165334|ref|XP_015900977.1|1.8e-5554.26PREDICTED: uncharacterized protein LOC107434072 [Ziziphus jujuba][more]
gi|590690781|ref|XP_007043602.1|2.6e-5453.25Microtubule-associated protein 6, putative [Theobroma cacao][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG04g03090.1Cp4.1LG04g03090.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR35103FAMILY NOT NAMEDcoord: 1..226
score: 5.7

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG04g03090Cucsa.147620Cucumber (Gy14) v1cgycpeB0395
Cp4.1LG04g03090CmaCh11G018790Cucurbita maxima (Rimu)cmacpeB148
Cp4.1LG04g03090CmoCh11G019580Cucurbita moschata (Rifu)cmocpeB126
Cp4.1LG04g03090CmoCh19G010280Cucurbita moschata (Rifu)cmocpeB492
Cp4.1LG04g03090Cla002268Watermelon (97103) v1cpewmB651
Cp4.1LG04g03090Csa7G048030Cucumber (Chinese Long) v2cpecuB690
Cp4.1LG04g03090MELO3C018732Melon (DHL92) v3.5.1cpemeB609
Cp4.1LG04g03090ClCG07G002870Watermelon (Charleston Gray)cpewcgB622
Cp4.1LG04g03090CSPI07G04670Wild cucumber (PI 183967)cpecpiB692
Cp4.1LG04g03090Lsi11G015610Bottle gourd (USVL1VR-Ls)cpelsiB526
Cp4.1LG04g03090MELO3C018732.2Melon (DHL92) v3.6.1cpemedB721
Cp4.1LG04g03090CsaV3_7G004470Cucumber (Chinese Long) v3cpecucB0863
Cp4.1LG04g03090Bhi05G001623Wax gourdcpewgoB0844
Cp4.1LG04g03090CsGy7G004240Cucumber (Gy14) v2cgybcpeB964
Cp4.1LG04g03090Carg19240Silver-seed gourdcarcpeB1223
Cp4.1LG04g03090Carg19124Silver-seed gourdcarcpeB1015
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG04g03090Cp4.1LG15g08060Cucurbita pepo (Zucchini)cpecpeB267
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG04g03090Cucurbita pepo (Zucchini)cpecpeB056
Cp4.1LG04g03090Cucurbita pepo (Zucchini)cpecpeB306
Cp4.1LG04g03090Cucurbita pepo (Zucchini)cpecpeB492
Cp4.1LG04g03090Cucumber (Gy14) v1cgycpeB0329
Cp4.1LG04g03090Cucurbita maxima (Rimu)cmacpeB451
Cp4.1LG04g03090Cucurbita maxima (Rimu)cmacpeB537
Cp4.1LG04g03090Cucurbita maxima (Rimu)cmacpeB573
Cp4.1LG04g03090Cucurbita maxima (Rimu)cmacpeB642
Cp4.1LG04g03090Cucurbita moschata (Rifu)cmocpeB412
Cp4.1LG04g03090Cucurbita moschata (Rifu)cmocpeB524
Cp4.1LG04g03090Cucurbita moschata (Rifu)cmocpeB592
Cp4.1LG04g03090Bottle gourd (USVL1VR-Ls)cpelsiB521
Cp4.1LG04g03090Watermelon (Charleston Gray)cpewcgB592
Cp4.1LG04g03090Watermelon (97103) v1cpewmB668
Cp4.1LG04g03090Melon (DHL92) v3.6.1cpemedB714
Cp4.1LG04g03090Silver-seed gourdcarcpeB0047
Cp4.1LG04g03090Silver-seed gourdcarcpeB0217
Cp4.1LG04g03090Cucumber (Chinese Long) v3cpecucB0812
Cp4.1LG04g03090Wax gourdcpewgoB0865