CmoCh19G010280 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh19G010280
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Microtubule-associated protein 6, putative
Location	Cmo_Chr19 : 9009305 .. 9009994 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGGTTCCTCTCGGCCCCGGCAAGTTCTACGGCAGCAGCCTCCCTCGTCCACGCTATTACACCGATATCAAGCTCAACAACGAGCGTATTGATCCACCTACGCCGGTCCTCGATCCGCTTCTCTCATGGGCAAACGAGGCTCATTGGTCTATGGGTGGCCTCAGCTTTAATCGCCTGAGGCTTCAAGGTCGAATCGAAGGTAATGTCCACAAACTTCGAGCCGAGCGCGAGAGGGTTGTTAAGCTGGACTCTGCGCCAAGGAGATCTAACCCTGACGACGAAGCTGCGGGCGATCGCCAATTCAAGAAGTCGAAATCTGTATCTCCACCGCCGGCGCCGATGGCAGCAAAGAGACGGCGATTTATGGCTCTGTTTGACGACGACGATGATGATGTTGGCGTGTACAAGGAAGAGACTGGGGTTGTGAAGAGGAGGTTGGTGAAGAAGCTGGGAGATGATTTTGATCGAGTGGCTGCAGAGAGTAAGGGAGATCAATTAAAGAGGGATAGAAGCTCGGAAATCAATGGGGTTTGTGAATCTGTAATGAAGATCGTTGGAGAGATTAACGATGAAAATACAAGGGGGGAAAAGGTCAACACTGAAAGAAAACGGAAGAGTGGTGGAAAAGTGGAGACTGGTTCCGTTTCTGGGACAAGAACATCTCCCAGATTGGCTAAATTGATTTGA

mRNA sequence

ATGGTGGTTCCTCTCGGCCCCGGCAAGTTCTACGGCAGCAGCCTCCCTCGTCCACGCTATTACACCGATATCAAGCTCAACAACGAGCGTATTGATCCACCTACGCCGGTCCTCGATCCGCTTCTCTCATGGGCAAACGAGGCTCATTGGTCTATGGGTGGCCTCAGCTTTAATCGCCTGAGGCTTCAAGGTCGAATCGAAGGTAATGTCCACAAACTTCGAGCCGAGCGCGAGAGGGTTGTTAAGCTGGACTCTGCGCCAAGGAGATCTAACCCTGACGACGAAGCTGCGGGCGATCGCCAATTCAAGAAGTCGAAATCTGTATCTCCACCGCCGGCGCCGATGGCAGCAAAGAGACGGCGATTTATGGCTCTGTTTGACGACGACGATGATGATGTTGGCGTGTACAAGGAAGAGACTGGGGTTGTGAAGAGGAGGTTGGTGAAGAAGCTGGGAGATGATTTTGATCGAGTGGCTGCAGAGAGTAAGGGAGATCAATTAAAGAGGGATAGAAGCTCGGAAATCAATGGGGTTTGTGAATCTGTAATGAAGATCGTTGGAGAGATTAACGATGAAAATACAAGGGGGGAAAAGGTCAACACTGAAAGAAAACGGAAGAGTGGTGGAAAAGTGGAGACTGGTTCCGTTTCTGGGACAAGAACATCTCCCAGATTGGCTAAATTGATTTGA

Coding sequence (CDS)

ATGGTGGTTCCTCTCGGCCCCGGCAAGTTCTACGGCAGCAGCCTCCCTCGTCCACGCTATTACACCGATATCAAGCTCAACAACGAGCGTATTGATCCACCTACGCCGGTCCTCGATCCGCTTCTCTCATGGGCAAACGAGGCTCATTGGTCTATGGGTGGCCTCAGCTTTAATCGCCTGAGGCTTCAAGGTCGAATCGAAGGTAATGTCCACAAACTTCGAGCCGAGCGCGAGAGGGTTGTTAAGCTGGACTCTGCGCCAAGGAGATCTAACCCTGACGACGAAGCTGCGGGCGATCGCCAATTCAAGAAGTCGAAATCTGTATCTCCACCGCCGGCGCCGATGGCAGCAAAGAGACGGCGATTTATGGCTCTGTTTGACGACGACGATGATGATGTTGGCGTGTACAAGGAAGAGACTGGGGTTGTGAAGAGGAGGTTGGTGAAGAAGCTGGGAGATGATTTTGATCGAGTGGCTGCAGAGAGTAAGGGAGATCAATTAAAGAGGGATAGAAGCTCGGAAATCAATGGGGTTTGTGAATCTGTAATGAAGATCGTTGGAGAGATTAACGATGAAAATACAAGGGGGGAAAAGGTCAACACTGAAAGAAAACGGAAGAGTGGTGGAAAAGTGGAGACTGGTTCCGTTTCTGGGACAAGAACATCTCCCAGATTGGCTAAATTGATTTGA

Homology

[Close]

BLAST of CmoCh19G010280 vs. TrEMBL
Match: A0A0A0K3S4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G048030 PE=4 SV=1)

HSP 1 Score: 340.9 bits (873), Expect = 1.2e-90
Identity = 178/235 (75.74%), Postives = 201/235 (85.53%), Query Frame = 1


Query: 1   MVVPLGPGKFYGSSLPRPRYYTDIKLNNERIDPPTPVLDPLLSWANEAHWSMGGLSFNRL 60
           MVVPLGPGKFYGSSLPRPRYY+D+K N+ER+DPPTPVLDPLLSWANEAHWSMGGLSFNRL
Sbjct: 1   MVVPLGPGKFYGSSLPRPRYYSDVKFNDERVDPPTPVLDPLLSWANEAHWSMGGLSFNRL 60

Query: 61  RLQGRIEGNVHKLRAERERVV-------KLDSAPRRSNPDDEAAGDRQFKKSKSVSPPPA 120
           RLQGRIEGNVHKLR ERE+V        KLDSAP+RS+PD  A   RQ KK++SV+PPPA
Sbjct: 61  RLQGRIEGNVHKLRTEREKVAKKKLKAQKLDSAPKRSDPDAGADAHRQLKKARSVTPPPA 120

Query: 121 PMAAKRRRFMALFDDDDDDVGVYKEETGVVKRRLVKKLGDDFDRVAAESKGDQLK--RDR 180
           P+A KRRR M LF +D+DD+G+ KEE GVVKRRLVKKLGDDFDRVAAESK  QLK  +DR
Sbjct: 121 PIATKRRRLMVLF-EDEDDIGMEKEEIGVVKRRLVKKLGDDFDRVAAESKRSQLKGLKDR 180

Query: 181 SSEINGVCESVMKIVGEINDENTRGEKVNTERKRKSGGKVETGSVSGTRTSPRLA 227
           SSEINGV ESVMKIV EIN+ENT+ +K N ERK K+GG VE+ SVSG+R+SPRLA
Sbjct: 181 SSEINGVNESVMKIVEEINNENTKVKKTNIERKGKTGGNVESVSVSGSRSSPRLA 234

[Close]

BLAST of CmoCh19G010280 vs. TrEMBL
Match: A0A061EAW7_THECC (Microtubule-associated protein 6, putative OS=Theobroma cacao GN=TCM_008115 PE=4 SV=1)

HSP 1 Score: 229.9 bits (585), Expect = 3.0e-57
Identity = 133/239 (55.65%), Postives = 168/239 (70.29%), Query Frame = 1


Query: 1   MVVPLGPGKFYGSSLPRPRYYTDIKLNNERIDPPTPVLDPLLSWANEAHWSMGGLSFNRL 60
           MVVPLGPGKFYGSSLPRPR YTD K N++R+DPP PVLDPLLSWANEAHWSMGGLSF RL
Sbjct: 1   MVVPLGPGKFYGSSLPRPRIYTDTKFNSDRVDPPLPVLDPLLSWANEAHWSMGGLSFKRL 60

Query: 61  RLQGRIEGNVHKLRAERERVVKLDSAPRRSNPDDEAAGDRQFKKSKSVSPPPAPMAAKRR 120
           RLQGRIEGNV +L+A+RE++VK        +  D+A   ++ K+  SVSPPPAP+A KRR
Sbjct: 61  RLQGRIEGNVKRLKAQREKLVK--------DSPDKAHIIKKNKRDASVSPPPAPVAVKRR 120

Query: 121 RFMALFDDD-----DDDVGVYKEETGVVKRRLVKKLGDDFDRVAAESKGDQLKRDRSSEI 180
           RF+ L DDD     +D++   +EE  V+++   +KLGDDF+RVA  S G  + +   S  
Sbjct: 121 RFLDLNDDDESENEEDEMVEEREEKRVLRKGAARKLGDDFERVA--SNGVAVSKRERSFS 180

Query: 181 NGVCESVMKIVGEINDENT-RGEKVNTERKRKS------GGKVETGSVSGTRTSPRLAK 228
           +G+   VM IV E+N E+  +G+K   ++K+KS       GKVE    SGTRTSPRLAK
Sbjct: 181 DGIGVDVMNIVEEVNMESEFQGDKKKKKKKKKSIEKGLKNGKVE--GQSGTRTSPRLAK 227

[Close]

BLAST of CmoCh19G010280 vs. TrEMBL
Match: W9R4I2_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_004788 PE=4 SV=1)

HSP 1 Score: 223.0 bits (567), Expect = 3.7e-55
Identity = 132/252 (52.38%), Postives = 165/252 (65.48%), Query Frame = 1


Query: 1   MVVPLGPGKFYGSSLPRPRYYTDIKLNNERIDPPTPVLDPLLSWANEAHWSMGGLSFNRL 60
           M+V LGPGKFYG+SLPRPR+YTD+K N+ER+DPPTPVLDPLLSWANEAHWSMGGLSF RL
Sbjct: 1   MMVSLGPGKFYGTSLPRPRFYTDVKFNDERVDPPTPVLDPLLSWANEAHWSMGGLSFKRL 60

Query: 61  RLQGRIEGNVHKLRAERERVVKL------DSAPRRSNPDDEAAGDRQFKKSKSVSPPPAP 120
           R QGRIEG+V KLRAERE++ +        +A   SN  D    +R+   S   SPPPAP
Sbjct: 61  RFQGRIEGSVSKLRAEREKLERKRKKEGKQTAGSSSNGSDLVGSERKMVDSDEDSPPPAP 120

Query: 121 MAAKRRRFMALFDDDDDDVGVYKEETGVVK------RRLVKKLGDDFDRVAAESK----- 180
           +A KRRRFM L D+D++D    +EE   ++      RRLVKKLGDDFDRVA E++     
Sbjct: 121 IATKRRRFMDLIDEDEEDDAEEEEEEEKIRSLRVRRRRLVKKLGDDFDRVAPENEKADRS 180

Query: 181 -------GDQLKRDRSSEINGVCESVMKIVGEINDENTRGEK-VNTERKRKSGGKVETGS 228
                  G + +R R  E N   E+VM +V E+N  N+ G+K   +  K K+ G  E+  
Sbjct: 181 PSKSLGNGSRTRR-RILEDNEAIETVMNVVEEVNKMNSMGKKSKGSGNKGKAAGGSES-P 240

[Close]

BLAST of CmoCh19G010280 vs. TrEMBL
Match: B9RVZ1_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1174260 PE=4 SV=1)

HSP 1 Score: 215.3 bits (547), Expect = 7.7e-53
Identity = 118/227 (51.98%), Postives = 153/227 (67.40%), Query Frame = 1


Query: 1   MVVPLGPGKFYGSSLPRPRYYTDIKLNNERIDPPTPVLDPLLSWANEAHWSMGGLSFNRL 60
           MVVPLGPGKFYGSSLPRPR YTD+K N++R+DPP PV DP LSWA EAHWSMGG SF RL
Sbjct: 1   MVVPLGPGKFYGSSLPRPRIYTDVKFNSDRVDPPVPVTDPFLSWAQEAHWSMGGHSFQRL 60

Query: 61  RLQGRIEGNVHKLRAERERVVKLDSAPRRSNPDDEAAGDRQFKKSKSVSPPPAPMAAKRR 120
           RLQGRIEG+V+KLR  RE+  KL +   R++P      D   K+  S SPPPAP   KRR
Sbjct: 61  RLQGRIEGSVNKLRKFREKEAKLQA---RNSPASNKKNDNG-KRVGSASPPPAPKVIKRR 120

Query: 121 RFMALFDDDDDDVGVYKEETGVVKRRLVKKLGDDFDRVAAESKGDQLKRDRSSEINGVCE 180
           RFM L D++ ++    +    V K++ V+KL  DF++VA ES       ++     G+ +
Sbjct: 121 RFMDLMDEESEEEEEEEIVEKVKKKKSVRKLVGDFEKVATES-----VENKGKASGGIDD 180

Query: 181 SVMKIVGEINDENTRGEKVNTERKRKSGGKVETGSVSGTRTSPRLAK 228
           +VMK+V E+N EN+ G+K+   +K KS  +  +  V+G RTSPRLAK
Sbjct: 181 AVMKVVEEVNRENSVGKKLRRGKKGKSNKENGSSPVNGVRTSPRLAK 218

[Close]

BLAST of CmoCh19G010280 vs. TrEMBL
Match: A0A0D2SKK6_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_005G201200 PE=4 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 2.2e-52
Identity = 118/238 (49.58%), Postives = 159/238 (66.81%), Query Frame = 1


Query: 1   MVVPLGPGKFYGSSLPRPRYYTDIKLNNERIDPPTPVLDPLLSWANEAHWSMGGLSFNRL 60
           MVVPLGPGKFYGSSLPRPR YT+ + N+ER++PP PVLDPLLSWANEAHWSMGGLSF RL
Sbjct: 1   MVVPLGPGKFYGSSLPRPRIYTETRFNSERVNPPVPVLDPLLSWANEAHWSMGGLSFKRL 60

Query: 61  RLQGRIEGNVHKLRAERERVV-KLDSAPRRSNPDDEAAGDRQFKKSKSVSPPPAPMAAKR 120
           RLQGRIEGNV +L+A+R++ +   D  P+++N D             S SPPPAP+A KR
Sbjct: 61  RLQGRIEGNVQRLKAQRDKFLNNKDPIPKKNNSD------------ASFSPPPAPVAVKR 120

Query: 121 RRFMALFDDD------DDDVGVYKEETGVVKRRLVKKLGDDFDRVAAESKGDQLKRDRSS 180
           +RF+ L D+D      D+++ + +EE  V+++  V+KLGDDF+RVA +         +  
Sbjct: 121 KRFLDLNDEDVESENEDNEIVMNREEKRVLRKGAVRKLGDDFERVAKDKDSGVASGGKRG 180

Query: 181 EINGVCESVMKIVGEINDENTRGEKVNTER----KRKSGGKVETGSVSGTRTSPRLAK 228
             +G+   VMKIV E+N E+   +K   +R     +K   +V +G+ + TR SPRLAK
Sbjct: 181 FSDGIGIDVMKIVEEVNVESEEIKKKKKKRIVKGLKKGTDEVRSGTGTTTRASPRLAK 226

[Close]

BLAST of CmoCh19G010280 vs. TAIR10
Match: AT4G28310.1 (AT4G28310.1 unknown protein)

HSP 1 Score: 173.3 bits (438), Expect = 1.7e-43
Identity = 107/227 (47.14%), Postives = 139/227 (61.23%), Query Frame = 1


Query: 3   VPLGPGKFYGSSLPRPRYYTDIKLNNERIDPPTPVLDPLLSWANEAHWSMGGLSFNRLRL 62
           + + P  FYG+ LPRPR++ + K N+ R+DPP  VLDPLLSWA +AHWSMGGL+F RLRL
Sbjct: 9   IAIRPVSFYGNGLPRPRFFDNPKFNDYRVDPPLSVLDPLLSWARDAHWSMGGLNFTRLRL 68

Query: 63  QGRIEGNVHKLRAERER--VVKLDSAPRRSNPDDEAAGDRQFKKSKSVSPPPAPMAAKRR 122
           QGRIEGNV+KLRA+ E+   VKL+S              R+ K+S S SPP AP+  KRR
Sbjct: 69  QGRIEGNVNKLRAQLEKSTPVKLESG-------------RKKKRSGSESPPSAPIVVKRR 128

Query: 123 RFMALFDDDDDDVGVYKEETGVVKRRLVKKLGDDFDRVAAESKGDQLKRDRSSEINGVCE 182
           R++ L D DD++VG   E+ GVV  R+ +KL DDFDRVA ESK                 
Sbjct: 129 RYLDLNDSDDEEVG--SEDEGVV--RIRRKLSDDFDRVAEESK----------------- 188

Query: 183 SVMKIVGEINDENTRGEKVNTERKRKSGGKVETGSVSGTRTSPRLAK 228
              K+V E N ++ + E V  +R  +    V+    S TR+SPRLAK
Sbjct: 189 --TKLV-EANKKSIKSEFVEKKRLIEKKKIVKVNKTSSTRSSPRLAK 198

[Close]

BLAST of CmoCh19G010280 vs. TAIR10
Match: AT1G52270.1 (AT1G52270.1 unknown protein)

HSP 1 Score: 52.0 bits (123), Expect = 5.7e-07
Identity = 21/39 (53.85%), Postives = 28/39 (71.79%), Query Frame = 1


Query: 7  PGKFYGSSLPRPRYYTDIKLNNERIDPPTPVLDPLLSWA 46
          P  FY + LPRPR++ + + N+ R+D P  VLDPLLSWA
Sbjct: 13 PVAFYRNGLPRPRFFDNHRFNSYRVDTPLSVLDPLLSWA 51

[Close]

BLAST of CmoCh19G010280 vs. NCBI nr
Match: gi|659110606|ref|XP_008455314.1| (PREDICTED: uncharacterized protein LOC103495510 [Cucumis melo])

HSP 1 Score: 341.3 bits (874), Expect = 1.3e-90
Identity = 180/235 (76.60%), Postives = 203/235 (86.38%), Query Frame = 1


Query: 1   MVVPLGPGKFYGSSLPRPRYYTDIKLNNERIDPPTPVLDPLLSWANEAHWSMGGLSFNRL 60
           MVVPLGPGKFYGSSLPRPRYYTD+KLN+ER+DPPTPVLDPLLSWANEAHWSMGGLSFNRL
Sbjct: 1   MVVPLGPGKFYGSSLPRPRYYTDVKLNDERVDPPTPVLDPLLSWANEAHWSMGGLSFNRL 60

Query: 61  RLQGRIEGNVHKLRAERERVV-------KLDSAPRRSNPDDEAAGDRQFKKSKSVSPPPA 120
           RLQGRIEGNVHKLR ERE+V        KLDSAP+RS+PD  A   RQ KK++SV+PPPA
Sbjct: 61  RLQGRIEGNVHKLRVEREKVAKKKLKAEKLDSAPKRSDPDAGADAHRQLKKARSVTPPPA 120

Query: 121 PMAAKRRRFMALFDDDDDDVGVYKEETGVVKRRLVKKLGDDFDRVAAESKGDQLK--RDR 180
           P+A KRRR M LF +D+DDVG+ KEE GVVKRRLVKKLGDDFDRVAAESK +QLK  +DR
Sbjct: 121 PVATKRRRLMVLF-EDEDDVGMDKEEIGVVKRRLVKKLGDDFDRVAAESKRNQLKGLKDR 180

Query: 181 SSEINGVCESVMKIVGEINDENTRGEKVNTERKRKSGGKVETGSVSGTRTSPRLA 227
           SSEIN V ESVMKIV EIN+ENT+ +++N E+K K+ GKVE+ SVSGTRTSPRLA
Sbjct: 181 SSEINEVNESVMKIVEEINNENTKVKEINIEKKGKTVGKVESVSVSGTRTSPRLA 234

[Close]

BLAST of CmoCh19G010280 vs. NCBI nr
Match: gi|449438098|ref|XP_004136827.1| (PREDICTED: uncharacterized protein LOC101207471 [Cucumis sativus])

HSP 1 Score: 340.9 bits (873), Expect = 1.7e-90
Identity = 178/235 (75.74%), Postives = 201/235 (85.53%), Query Frame = 1


Query: 1   MVVPLGPGKFYGSSLPRPRYYTDIKLNNERIDPPTPVLDPLLSWANEAHWSMGGLSFNRL 60
           MVVPLGPGKFYGSSLPRPRYY+D+K N+ER+DPPTPVLDPLLSWANEAHWSMGGLSFNRL
Sbjct: 1   MVVPLGPGKFYGSSLPRPRYYSDVKFNDERVDPPTPVLDPLLSWANEAHWSMGGLSFNRL 60

Query: 61  RLQGRIEGNVHKLRAERERVV-------KLDSAPRRSNPDDEAAGDRQFKKSKSVSPPPA 120
           RLQGRIEGNVHKLR ERE+V        KLDSAP+RS+PD  A   RQ KK++SV+PPPA
Sbjct: 61  RLQGRIEGNVHKLRTEREKVAKKKLKAQKLDSAPKRSDPDAGADAHRQLKKARSVTPPPA 120

Query: 121 PMAAKRRRFMALFDDDDDDVGVYKEETGVVKRRLVKKLGDDFDRVAAESKGDQLK--RDR 180
           P+A KRRR M LF +D+DD+G+ KEE GVVKRRLVKKLGDDFDRVAAESK  QLK  +DR
Sbjct: 121 PIATKRRRLMVLF-EDEDDIGMEKEEIGVVKRRLVKKLGDDFDRVAAESKRSQLKGLKDR 180

Query: 181 SSEINGVCESVMKIVGEINDENTRGEKVNTERKRKSGGKVETGSVSGTRTSPRLA 227
           SSEINGV ESVMKIV EIN+ENT+ +K N ERK K+GG VE+ SVSG+R+SPRLA
Sbjct: 181 SSEINGVNESVMKIVEEINNENTKVKKTNIERKGKTGGNVESVSVSGSRSSPRLA 234

[Close]

BLAST of CmoCh19G010280 vs. NCBI nr
Match: gi|590690781|ref|XP_007043602.1| (Microtubule-associated protein 6, putative [Theobroma cacao])

HSP 1 Score: 229.9 bits (585), Expect = 4.3e-57
Identity = 133/239 (55.65%), Postives = 168/239 (70.29%), Query Frame = 1


Query: 1   MVVPLGPGKFYGSSLPRPRYYTDIKLNNERIDPPTPVLDPLLSWANEAHWSMGGLSFNRL 60
           MVVPLGPGKFYGSSLPRPR YTD K N++R+DPP PVLDPLLSWANEAHWSMGGLSF RL
Sbjct: 1   MVVPLGPGKFYGSSLPRPRIYTDTKFNSDRVDPPLPVLDPLLSWANEAHWSMGGLSFKRL 60

Query: 61  RLQGRIEGNVHKLRAERERVVKLDSAPRRSNPDDEAAGDRQFKKSKSVSPPPAPMAAKRR 120
           RLQGRIEGNV +L+A+RE++VK        +  D+A   ++ K+  SVSPPPAP+A KRR
Sbjct: 61  RLQGRIEGNVKRLKAQREKLVK--------DSPDKAHIIKKNKRDASVSPPPAPVAVKRR 120

Query: 121 RFMALFDDD-----DDDVGVYKEETGVVKRRLVKKLGDDFDRVAAESKGDQLKRDRSSEI 180
           RF+ L DDD     +D++   +EE  V+++   +KLGDDF+RVA  S G  + +   S  
Sbjct: 121 RFLDLNDDDESENEEDEMVEEREEKRVLRKGAARKLGDDFERVA--SNGVAVSKRERSFS 180

Query: 181 NGVCESVMKIVGEINDENT-RGEKVNTERKRKS------GGKVETGSVSGTRTSPRLAK 228
           +G+   VM IV E+N E+  +G+K   ++K+KS       GKVE    SGTRTSPRLAK
Sbjct: 181 DGIGVDVMNIVEEVNMESEFQGDKKKKKKKKKSIEKGLKNGKVE--GQSGTRTSPRLAK 227

[Close]

BLAST of CmoCh19G010280 vs. NCBI nr
Match: gi|1009165334|ref|XP_015900977.1| (PREDICTED: uncharacterized protein LOC107434072 [Ziziphus jujuba])

HSP 1 Score: 224.9 bits (572), Expect = 1.4e-55
Identity = 138/255 (54.12%), Postives = 166/255 (65.10%), Query Frame = 1


Query: 1   MVVPLGPGKFYGSSLPRPRYYTDIKLNNERIDPPTPVLDPLLSWANEAHWSMGGLSFNRL 60
           MVVPLGPGKFYG+SLPRPR YTD+KLN+ER+DPP PVLDP LSWA+EAHWSMGGLSF RL
Sbjct: 1   MVVPLGPGKFYGTSLPRPRIYTDVKLNDERVDPPVPVLDPFLSWASEAHWSMGGLSFKRL 60

Query: 61  RLQGRIEGNVHKLRAERERVVKLDSAPRRSNPDDEAAGDRQFKKSKSVSPPPAPMAAKRR 120
           RLQGRIEG+V KL+AERE+  K       S+     +     K++ S+SPP APMA KRR
Sbjct: 61  RLQGRIEGSVKKLQAEREKFAKRSKIVTGSS-IGSGSSMSDSKRAVSISPPAAPMATKRR 120

Query: 121 RFMALFDDDDDDVGV----YKEETGV------VKRRLVKKLGDDFDRVAAES---KGDQL 180
           R MAL D+DDDD        +EE GV      VKRRLVK+L DDFDRVA+E+   KG  L
Sbjct: 121 RLMALIDEDDDDSSADEEEEEEEVGVVAPSRGVKRRLVKRLWDDFDRVASEAERGKGSPL 180

Query: 181 K-----------RDRS---SEINGVCESVMKIVGEINDENTRGEKVNTERKRKSG-GKVE 228
           K           R RS    E + V E+VMK+V E+     +G++V     +  G G   
Sbjct: 181 KGLSGGSEGMASRTRSRKTEEDDEVTETVMKVVEEVKMSTHKGKRVKGGGSKGQGNGGNA 240

[Close]

BLAST of CmoCh19G010280 vs. NCBI nr
Match: gi|1009129728|ref|XP_015881923.1| (PREDICTED: uncharacterized protein LOC107417790 [Ziziphus jujuba])

HSP 1 Score: 224.6 bits (571), Expect = 1.8e-55
Identity = 139/255 (54.51%), Postives = 165/255 (64.71%), Query Frame = 1


Query: 1   MVVPLGPGKFYGSSLPRPRYYTDIKLNNERIDPPTPVLDPLLSWANEAHWSMGGLSFNRL 60
           MVVPLGPGKFYG+SLPRPR YTD+KLN+ER+DPP PVLDP LSWA+EAHWSMGGLSF RL
Sbjct: 1   MVVPLGPGKFYGTSLPRPRIYTDVKLNDERVDPPVPVLDPFLSWASEAHWSMGGLSFKRL 60

Query: 61  RLQGRIEGNVHKLRAERERVVKLDSAPRRSNPDDEAAGDRQFKKSKSVSPPPAPMAAKRR 120
           RLQGRIEG V KL+AERE+  K       S+     +     K++ S+SPP APMA KRR
Sbjct: 61  RLQGRIEGCVKKLQAEREKFAKRSKIVAGSS-IGSGSSMSDSKRAVSISPPAAPMATKRR 120

Query: 121 RFMALFDDDDDDVGV----YKEETGV------VKRRLVKKLGDDFDRVAAES---KGDQL 180
           R MAL D+DDDD        +EE GV      VKRRLVK+L DDFDRVA+E+   KG  L
Sbjct: 121 RLMALIDEDDDDSSADEEEEEEEVGVVAPSRGVKRRLVKRLWDDFDRVASEAERGKGSPL 180

Query: 181 K-----------RDRS---SEINGVCESVMKIVGEINDENTRGEKV-NTERKRKSGGKVE 228
           K           R RS    E + V E+VMK+V E+     +G++V     K K  G   
Sbjct: 181 KGLSGGSEGMASRTRSRKTEEDDEVTETVMKVVEEVKMSTHKGKRVKGGGSKGKGNGGNA 240

The following BLAST results are available for this feature:

BLAST of CmoCh19G010280 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmoCh19G010280 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K3S4_CUCSA	1.2e-90	75.74	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G048030 PE=4 SV=1	[more]
A0A061EAW7_THECC	3.0e-57	55.65	Microtubule-associated protein 6, putative OS=Theobroma cacao GN=TCM_008115 PE=4...	[more]
W9R4I2_9ROSA	3.7e-55	52.38	Uncharacterized protein OS=Morus notabilis GN=L484_004788 PE=4 SV=1	[more]
B9RVZ1_RICCO	7.7e-53	51.98	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1174260 PE=4 SV=1	[more]
A0A0D2SKK6_GOSRA	2.2e-52	49.58	Uncharacterized protein OS=Gossypium raimondii GN=B456_005G201200 PE=4 SV=1	[more]

BLAST of CmoCh19G010280 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G28310.1	1.7e-43	47.14	unknown protein	[more]
AT1G52270.1	5.7e-07	53.85	unknown protein	[more]

BLAST of CmoCh19G010280 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659110606\|ref\|XP_008455314.1\|	1.3e-90	76.60	PREDICTED: uncharacterized protein LOC103495510 [Cucumis melo]	[more]
gi\|449438098\|ref\|XP_004136827.1\|	1.7e-90	75.74	PREDICTED: uncharacterized protein LOC101207471 [Cucumis sativus]	[more]
gi\|590690781\|ref\|XP_007043602.1\|	4.3e-57	55.65	Microtubule-associated protein 6, putative [Theobroma cacao]	[more]
gi\|1009165334\|ref\|XP_015900977.1\|	1.4e-55	54.12	PREDICTED: uncharacterized protein LOC107434072 [Ziziphus jujuba]	[more]
gi\|1009129728\|ref\|XP_015881923.1\|	1.8e-55	54.51	PREDICTED: uncharacterized protein LOC107417790 [Ziziphus jujuba]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh19G010280.1	CmoCh19G010280.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR35103	FAMILY NOT NAMED	coord: 1..197 score: 8.2

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh19G010280	Cucsa.147620	Cucumber (Gy14) v1	cgycmoB0407
CmoCh19G010280	CmaCh11G018790	Cucurbita maxima (Rimu)	cmacmoB142
CmoCh19G010280	Cla002268	Watermelon (97103) v1	cmowmB487
CmoCh19G010280	Csa7G048030	Cucumber (Chinese Long) v2	cmocuB518
CmoCh19G010280	MELO3C018732	Melon (DHL92) v3.5.1	cmomeB452
CmoCh19G010280	ClCG07G002870	Watermelon (Charleston Gray)	cmowcgB470
CmoCh19G010280	CSPI07G04670	Wild cucumber (PI 183967)	cmocpiB524
CmoCh19G010280	Lsi11G015610	Bottle gourd (USVL1VR-Ls)	cmolsiB457
CmoCh19G010280	Cp4.1LG15g08060	Cucurbita pepo (Zucchini)	cmocpeB481
CmoCh19G010280	Cp4.1LG04g03090	Cucurbita pepo (Zucchini)	cmocpeB492
CmoCh19G010280	MELO3C018732.2	Melon (DHL92) v3.6.1	cmomedB521
CmoCh19G010280	CsaV3_7G004470	Cucumber (Chinese Long) v3	cmocucB0622
CmoCh19G010280	Cla97C07G131200	Watermelon (97103) v2	cmowmbB525
CmoCh19G010280	Bhi05G001623	Wax gourd	cmowgoB0643
CmoCh19G010280	CsGy7G004240	Cucumber (Gy14) v2	cgybcmoB927
CmoCh19G010280	Carg19240	Silver-seed gourd	carcmoB1183
CmoCh19G010280	Carg19124	Silver-seed gourd	carcmoB0981

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh19G010280	CmoCh11G019580	Cucurbita moschata (Rifu)	cmocmoB108

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh19G010280	Silver-seed gourd	carcmoB0558
CmoCh19G010280	Watermelon (97103) v2	cmowmbB508
CmoCh19G010280	Wax gourd	cmowgoB0664
CmoCh19G010280	Cucurbita moschata (Rifu)	cmocmoB380
CmoCh19G010280	Cucurbita moschata (Rifu)	cmocmoB400
CmoCh19G010280	Cucurbita maxima (Rimu)	cmacmoB508
CmoCh19G010280	Cucurbita maxima (Rimu)	cmacmoB546
CmoCh19G010280	Watermelon (Charleston Gray)	cmowcgB457
CmoCh19G010280	Watermelon (97103) v1	cmowmB493
CmoCh19G010280	Cucurbita pepo (Zucchini)	cmocpeB485
CmoCh19G010280	Bottle gourd (USVL1VR-Ls)	cmolsiB453