Carg19240 (gene) Silver-seed gourd

Overview
NameCarg19240
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionHistone-lysine N-methyltransferase, H3 lysine-36 specific
LocationCucurbita_argyrosperma_scaffold_099 : 411933 .. 412622 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGGTTCCTCTCGGCCCCGGCAAGTTCTACGGCAGCAGCCTCCCTCGTCCACGCTATTACACCGATGTCAAGCTCAACAACGAGCGTATTGATCCACCTACGCCGGTCCTCGATCCGCTTCTCTCATGGGCAAACGAGGCTCATTGGTCTATGGGTGGCCTCAGCTTTAATCGCCTGAGGCTTCAAGGTCGAATCGAAGGTAATGTCCACAAACTTCGAGCCGAGCGCGAGAAGGTTGTTAAGCTGGACTCTGCGCCAAAGAGATCTAACCCTGACGACGAAGCTGCGGGCGATCGCCAATTCAAGAAGTCGAAATCTGTATCTCCACCGCCGGCGCCGATGGCAGCAAAGAGACGGCGATTTATGTCTCTGTTTGACGACGACGACGATGATGTTGGCGTGTACAAGGAAGAGACTGGGGTTGTGAAGAGGAGGTTGGTGAAGAAGCTGGGAGATGATTTTGATCGAGTGGCTGCAGAGAGTAAGGGCGATCAATTAAAGAGGGATGGAAGCTCGGAAATCAATGGGGTTTGTGAATCTGTAATGAAGATCGTTGGAGAGATTAACGATGAAAATACAAGGGGGAAAAAGGTCAACACTGAAAGAAAACGGAAGAGTGGTGGAAAAGTGGAGACTGGTTCTGTTTCTGGGACAAGAACATCTCCCAGATTGGCTAAATTGATTTGA

mRNA sequence

ATGGTGGTTCCTCTCGGCCCCGGCAAGTTCTACGGCAGCAGCCTCCCTCGTCCACGCTATTACACCGATGTCAAGCTCAACAACGAGCGTATTGATCCACCTACGCCGGTCCTCGATCCGCTTCTCTCATGGGCAAACGAGGCTCATTGGTCTATGGGTGGCCTCAGCTTTAATCGCCTGAGGCTTCAAGGTCGAATCGAAGGTAATGTCCACAAACTTCGAGCCGAGCGCGAGAAGGTTGTTAAGCTGGACTCTGCGCCAAAGAGATCTAACCCTGACGACGAAGCTGCGGGCGATCGCCAATTCAAGAAGTCGAAATCTGTATCTCCACCGCCGGCGCCGATGGCAGCAAAGAGACGGCGATTTATGTCTCTGTTTGACGACGACGACGATGATGTTGGCGTGTACAAGGAAGAGACTGGGGTTGTGAAGAGGAGGTTGGTGAAGAAGCTGGGAGATGATTTTGATCGAGTGGCTGCAGAGAGTAAGGGCGATCAATTAAAGAGGGATGGAAGCTCGGAAATCAATGGGGTTTGTGAATCTGTAATGAAGATCGTTGGAGAGATTAACGATGAAAATACAAGGGGGAAAAAGGTCAACACTGAAAGAAAACGGAAGAGTGGTGGAAAAGTGGAGACTGGTTCTGTTTCTGGGACAAGAACATCTCCCAGATTGGCTAAATTGATTTGA

Coding sequence (CDS)

ATGGTGGTTCCTCTCGGCCCCGGCAAGTTCTACGGCAGCAGCCTCCCTCGTCCACGCTATTACACCGATGTCAAGCTCAACAACGAGCGTATTGATCCACCTACGCCGGTCCTCGATCCGCTTCTCTCATGGGCAAACGAGGCTCATTGGTCTATGGGTGGCCTCAGCTTTAATCGCCTGAGGCTTCAAGGTCGAATCGAAGGTAATGTCCACAAACTTCGAGCCGAGCGCGAGAAGGTTGTTAAGCTGGACTCTGCGCCAAAGAGATCTAACCCTGACGACGAAGCTGCGGGCGATCGCCAATTCAAGAAGTCGAAATCTGTATCTCCACCGCCGGCGCCGATGGCAGCAAAGAGACGGCGATTTATGTCTCTGTTTGACGACGACGACGATGATGTTGGCGTGTACAAGGAAGAGACTGGGGTTGTGAAGAGGAGGTTGGTGAAGAAGCTGGGAGATGATTTTGATCGAGTGGCTGCAGAGAGTAAGGGCGATCAATTAAAGAGGGATGGAAGCTCGGAAATCAATGGGGTTTGTGAATCTGTAATGAAGATCGTTGGAGAGATTAACGATGAAAATACAAGGGGGAAAAAGGTCAACACTGAAAGAAAACGGAAGAGTGGTGGAAAAGTGGAGACTGGTTCTGTTTCTGGGACAAGAACATCTCCCAGATTGGCTAAATTGATTTGA

Protein sequence

MVVPLGPGKFYGSSLPRPRYYTDVKLNNERIDPPTPVLDPLLSWANEAHWSMGGLSFNRLRLQGRIEGNVHKLRAEREKVVKLDSAPKRSNPDDEAAGDRQFKKSKSVSPPPAPMAAKRRRFMSLFDDDDDDVGVYKEETGVVKRRLVKKLGDDFDRVAAESKGDQLKRDGSSEINGVCESVMKIVGEINDENTRGKKVNTERKRKSGGKVETGSVSGTRTSPRLAKLI
Homology
[Close]
BLAST of Carg19240 vs. NCBI nr
Match: XP_023554607.1 (uncharacterized protein LOC111811804 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 340.9 bits (873), Expect = 3.4e-90
Identity = 222/229 (96.94%), Postives = 225/229 (98.25%), Query Frame = 0 

Query: 1   MVVPLGPGKFYGSSLPRPRYYTDVKLNNERIDPPTPVLDPLLSWANEAHWSMGGLSFNRL 60
           MVVPLGPGKFYGSSLPRPRYYTDVKLNNERIDPPTPVLDPLLSWANEAHWSMGGLSFNRL
Sbjct: 1   MVVPLGPGKFYGSSLPRPRYYTDVKLNNERIDPPTPVLDPLLSWANEAHWSMGGLSFNRL 60

Query: 61  RLQGRIEGNVHKLRAEREKVVKLDSAPKRSNPDDXXXXXXXXXXXXXXXXXXXXXXXXXX 120
           RLQGRIEGNVHKLRAEREKVVKLDSAPKRSNPDDXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 61  RLQGRIEGNVHKLRAEREKVVKLDSAPKRSNPDDXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXKEETGVVKRRLVKKLGDDFDRVAAESKGDQLKRDGSSEINGVCE 180
           XXXXXXXXXXXXXXXX  ETGVVKRRLVKKLGDDFDRVAAESKG+QLKRD SSEINGVCE
Sbjct: 121 XXXXXXXXXXXXXXXXXXETGVVKRRLVKKLGDDFDRVAAESKGNQLKRDRSSEINGVCE 180

Query: 181 SVMKIVGEINDENTRGKKVNTERKRKSGGKVETGSVSGTRTSPRLAKLI 230
           SVMKIV EINDENTRG+KVNTERKRKSGG+VETGSVSGTRTSPRLAKLI
Sbjct: 181 SVMKIVEEINDENTRGEKVNTERKRKSGGRVETGSVSGTRTSPRLAKLI 229

[Close]
BLAST of Carg19240 vs. NCBI nr
Match: XP_022952444.1 (uncharacterized protein LOC111455131 [Cucurbita moschata])

HSP 1 Score: 339.0 bits (868), Expect = 1.3e-89
Identity = 220/229 (96.07%), Postives = 224/229 (97.82%), Query Frame = 0 

Query: 1   MVVPLGPGKFYGSSLPRPRYYTDVKLNNERIDPPTPVLDPLLSWANEAHWSMGGLSFNRL 60
           MVVPLGPGKFYGSSLPRPRYYTD+KLNNERIDPPTPVLDPLLSWANEAHWSMGGLSFNRL
Sbjct: 1   MVVPLGPGKFYGSSLPRPRYYTDIKLNNERIDPPTPVLDPLLSWANEAHWSMGGLSFNRL 60

Query: 61  RLQGRIEGNVHKLRAEREKVVKLDSAPKRSNPDDXXXXXXXXXXXXXXXXXXXXXXXXXX 120
           RLQGRIEGNVHKLRAERE+VVKLDSAP+RSNP  XXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 61  RLQGRIEGNVHKLRAERERVVKLDSAPRRSNPXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXKEETGVVKRRLVKKLGDDFDRVAAESKGDQLKRDGSSEINGVCE 180
           XXXXXXXXXXXXXXXX  ETGVVKRRLVKKLGDDFDRVAAESKGDQLKRD SSEINGVCE
Sbjct: 121 XXXXXXXXXXXXXXXXXXETGVVKRRLVKKLGDDFDRVAAESKGDQLKRDRSSEINGVCE 180

Query: 181 SVMKIVGEINDENTRGKKVNTERKRKSGGKVETGSVSGTRTSPRLAKLI 230
           SVMKIVGEINDENTRG+KVNTERKRKSGGKVETGSVSGTRTSPRLAKLI
Sbjct: 181 SVMKIVGEINDENTRGEKVNTERKRKSGGKVETGSVSGTRTSPRLAKLI 229

[Close]
BLAST of Carg19240 vs. NCBI nr
Match: XP_022969248.1 (uncharacterized protein LOC111468305 [Cucurbita maxima])

HSP 1 Score: 328.2 bits (840), Expect = 2.3e-86
Identity = 218/229 (95.20%), Postives = 219/229 (95.63%), Query Frame = 0 

Query: 1   MVVPLGPGKFYGSSLPRPRYYTDVKLNNERIDPPTPVLDPLLSWANEAHWSMGGLSFNRL 60
           MVVPLGPGKFYGSSLPRPRYY DVKLNNERIDPPTPVLDPLLSWANEAHWSMGGLSFNRL
Sbjct: 1   MVVPLGPGKFYGSSLPRPRYYIDVKLNNERIDPPTPVLDPLLSWANEAHWSMGGLSFNRL 60

Query: 61  RLQGRIEGNVHKLRAEREKVVKLDSAPKRSNPDDXXXXXXXXXXXXXXXXXXXXXXXXXX 120
           RLQGRIEGNVHKLRAEREKVVKLDSAPKRSN   XXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 61  RLQGRIEGNVHKLRAEREKVVKLDSAPKRSNXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXKEETGVVKRRLVKKLGDDFDRVAAESKGDQLKRDGSSEINGVCE 180
           XXXXXXXXXXXXXXXX   TGVVKRRLVKKLGDDFDRVAAESKG+QLKRD SSEINGVCE
Sbjct: 121 XXXXXXXXXXXXXXXXXXXTGVVKRRLVKKLGDDFDRVAAESKGNQLKRDKSSEINGVCE 180

Query: 181 SVMKIVGEINDENTRGKKVNTERKRKSGGKVETGSVSGTRTSPRLAKLI 230
           SVMKIV EINDENTRGKKVNTERKRKS GKVETGSVSGTRTSPRLAKLI
Sbjct: 181 SVMKIVEEINDENTRGKKVNTERKRKSSGKVETGSVSGTRTSPRLAKLI 229

[Close]
BLAST of Carg19240 vs. NCBI nr
Match: XP_008455314.1 (PREDICTED: uncharacterized protein LOC103495510 [Cucumis melo])

HSP 1 Score: 278.5 bits (711), Expect = 2.1e-71
Identity = 170/235 (72.34%), Postives = 182/235 (77.45%), Query Frame = 0 

Query: 1   MVVPLGPGKFYGSSLPRPRYYTDVKLNNERIDPPTPVLDPLLSWANEAHWSMGGLSFNRL 60
           MVVPLGPGKFYGSSLPRPRYYTDVKLN+ER+DPPTPVLDPLLSWANEAHWSMGGLSFNRL
Sbjct: 1   MVVPLGPGKFYGSSLPRPRYYTDVKLNDERVDPPTPVLDPLLSWANEAHWSMGGLSFNRL 60

Query: 61  RLQGRIEGNVHKLRAEREKVV-------KLDSAPKRSNPDDXXXXXXXXXXXXXXXXXXX 120
           RLQGRIEGNVHKLR EREKV        KLDSAPKRS+P D                  X
Sbjct: 61  RLQGRIEGNVHKLRVEREKVAKKKLKAEKLDSAPKRSDP-DAGADAHRQLKKARSVTPPX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXKEETGVVKRRLVKKLGDDFDRVAAESKGDQLK--RDG 180
           XXXXXXXXXXX            KEE GVVKRRLVKKLGDDFDRVAAESK +QLK  +D 
Sbjct: 121 XXXXXXXXXXXVLFEDEDDVGMDKEEIGVVKRRLVKKLGDDFDRVAAESKRNQLKGLKDR 180

Query: 181 SSEINGVCESVMKIVGEINDENTRGKKVNTERKRKSGGKVETGSVSGTRTSPRLA 227
           SSEIN V ESVMKIV EIN+ENT+ K++N E+K K+ GKVE+ SVSGTRTSPRLA
Sbjct: 181 SSEINEVNESVMKIVEEINNENTKVKEINIEKKGKTVGKVESVSVSGTRTSPRLA 234

[Close]
BLAST of Carg19240 vs. NCBI nr
Match: XP_004136827.1 (PREDICTED: uncharacterized protein LOC101207471 [Cucumis sativus] >KGN43619.1 hypothetical protein Csa_7G048030 [Cucumis sativus])

HSP 1 Score: 278.1 bits (710), Expect = 2.7e-71
Identity = 157/235 (66.81%), Postives = 168/235 (71.49%), Query Frame = 0 

Query: 1   MVVPLGPGKFYGSSLPRPRYYTDVKLNNERIDPPTPVLDPLLSWANEAHWSMGGLSFNRL 60
           MVVPLGPGKFYGSSLPRPRYY+DVK N+ER+DPPTPVLDPLLSWANEAHWSMGGLSFNRL
Sbjct: 1   MVVPLGPGKFYGSSLPRPRYYSDVKFNDERVDPPTPVLDPLLSWANEAHWSMGGLSFNRL 60

Query: 61  RLQGRIEGNVHKLRAEREKVV-------KLDSAPKRSNPDDXXXXXXXXXXXXXXXXXXX 120
           RLQGRIEGNVHKLR EREKV        KLDSAPKRS+P D                   
Sbjct: 61  RLQGRIEGNVHKLRTEREKVAKKKLKAQKLDSAPKRSDP-DAGADAHRQLKKARSVTPPP 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXKEETGVVKRRLVKKLGDDFDRVAAESKGDQLK--RDG 180
                                  KEE GVVKRRLVKKLGDDFDRVAAESK  QLK  +D 
Sbjct: 121 APIATKRRRLMVLFEDEDDIGMEKEEIGVVKRRLVKKLGDDFDRVAAESKRSQLKGLKDR 180

Query: 181 SSEINGVCESVMKIVGEINDENTRGKKVNTERKRKSGGKVETGSVSGTRTSPRLA 227
           SSEINGV ESVMKIV EIN+ENT+ KK N ERK K+GG VE+ SVSG+R+SPRLA
Sbjct: 181 SSEINGVNESVMKIVEEINNENTKVKKTNIERKGKTGGNVESVSVSGSRSSPRLA 234

[Close]
BLAST of Carg19240 vs. TAIR10
Match: AT4G28310.1 (unknown protein)

HSP 1 Score: 124.8 bits (312), Expect = 6.9e-29
Identity = 107/227 (47.14%), Postives = 130/227 (57.27%), Query Frame = 0 

Query: 3   VPLGPGKFYGSSLPRPRYYTDVKLNNERIDPPTPVLDPLLSWANEAHWSMGGLSFNRLRL 62
           + + P  FYG+ LPRPR++ + K N+ R+DPP  VLDPLLSWA +AHWSMGGL+F RLRL
Sbjct: 9   IAIRPVSFYGNGLPRPRFFDNPKFNDYRVDPPLSVLDPLLSWARDAHWSMGGLNFTRLRL 68

Query: 63  QGRIEGNVHKLRAEREK--VVKLDSAPKRSNPDDXXXXXXXXXXXXXXXXXXXXXXXXXX 122
           QGRIEGNV+KLRA+ EK   VKL+S  K               XXXXXXXXXXXXXXXXX
Sbjct: 69  QGRIEGNVNKLRAQLEKSTPVKLESGRK---------------XXXXXXXXXXXXXXXXX 128

Query: 123 XXXXXXXXXXXXXXXXKEETGVVKRRLVKKLGDDFDRVAAESKGDQLKRDGSSEINGVCE 182
           XXX              E+ GVV  R+ +KL DDFDRVA ESK                 
Sbjct: 129 XXXYLDLNDSDDEEVGSEDEGVV--RIRRKLSDDFDRVAEESK----------------- 188

Query: 183 SVMKIVGEINDENTRGKKVNTERKRKSGGKVETGSVSGTRTSPRLAK 228
              K+V E N ++ + + V  +              S TR+SPRLAK
Sbjct: 189 --TKLV-EANKKSIKSEFVEKKXXXXXXXXXXXXKTSSTRSSPRLAK 198

[Close]
BLAST of Carg19240 vs. TAIR10
Match: AT1G52270.1 (unknown protein)

HSP 1 Score: 52.0 bits (123), Expect = 5.7e-07
Identity = 21/39 (53.85%), Postives = 28/39 (71.79%), Query Frame = 0 

Query: 7  PGKFYGSSLPRPRYYTDVKLNNERIDPPTPVLDPLLSWA 46
          P  FY + LPRPR++ + + N+ R+D P  VLDPLLSWA
Sbjct: 13 PVAFYRNGLPRPRFFDNHRFNSYRVDTPLSVLDPLLSWA 51

[Close]
BLAST of Carg19240 vs. TrEMBL
Match: tr|A0A1S3C0M4|A0A1S3C0M4_CUCME (uncharacterized protein LOC103495510 OS=Cucumis melo OX=3656 GN=LOC103495510 PE=4 SV=1)

HSP 1 Score: 278.5 bits (711), Expect = 1.4e-71
Identity = 170/235 (72.34%), Postives = 182/235 (77.45%), Query Frame = 0 

Query: 1   MVVPLGPGKFYGSSLPRPRYYTDVKLNNERIDPPTPVLDPLLSWANEAHWSMGGLSFNRL 60
           MVVPLGPGKFYGSSLPRPRYYTDVKLN+ER+DPPTPVLDPLLSWANEAHWSMGGLSFNRL
Sbjct: 1   MVVPLGPGKFYGSSLPRPRYYTDVKLNDERVDPPTPVLDPLLSWANEAHWSMGGLSFNRL 60

Query: 61  RLQGRIEGNVHKLRAEREKVV-------KLDSAPKRSNPDDXXXXXXXXXXXXXXXXXXX 120
           RLQGRIEGNVHKLR EREKV        KLDSAPKRS+P D                  X
Sbjct: 61  RLQGRIEGNVHKLRVEREKVAKKKLKAEKLDSAPKRSDP-DAGADAHRQLKKARSVTPPX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXKEETGVVKRRLVKKLGDDFDRVAAESKGDQLK--RDG 180
           XXXXXXXXXXX            KEE GVVKRRLVKKLGDDFDRVAAESK +QLK  +D 
Sbjct: 121 XXXXXXXXXXXVLFEDEDDVGMDKEEIGVVKRRLVKKLGDDFDRVAAESKRNQLKGLKDR 180

Query: 181 SSEINGVCESVMKIVGEINDENTRGKKVNTERKRKSGGKVETGSVSGTRTSPRLA 227
           SSEIN V ESVMKIV EIN+ENT+ K++N E+K K+ GKVE+ SVSGTRTSPRLA
Sbjct: 181 SSEINEVNESVMKIVEEINNENTKVKEINIEKKGKTVGKVESVSVSGTRTSPRLA 234

[Close]
BLAST of Carg19240 vs. TrEMBL
Match: tr|A0A0A0K3S4|A0A0A0K3S4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G048030 PE=4 SV=1)

HSP 1 Score: 278.1 bits (710), Expect = 1.8e-71
Identity = 157/235 (66.81%), Postives = 168/235 (71.49%), Query Frame = 0 

Query: 1   MVVPLGPGKFYGSSLPRPRYYTDVKLNNERIDPPTPVLDPLLSWANEAHWSMGGLSFNRL 60
           MVVPLGPGKFYGSSLPRPRYY+DVK N+ER+DPPTPVLDPLLSWANEAHWSMGGLSFNRL
Sbjct: 1   MVVPLGPGKFYGSSLPRPRYYSDVKFNDERVDPPTPVLDPLLSWANEAHWSMGGLSFNRL 60

Query: 61  RLQGRIEGNVHKLRAEREKVV-------KLDSAPKRSNPDDXXXXXXXXXXXXXXXXXXX 120
           RLQGRIEGNVHKLR EREKV        KLDSAPKRS+P D                   
Sbjct: 61  RLQGRIEGNVHKLRTEREKVAKKKLKAQKLDSAPKRSDP-DAGADAHRQLKKARSVTPPP 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXKEETGVVKRRLVKKLGDDFDRVAAESKGDQLK--RDG 180
                                  KEE GVVKRRLVKKLGDDFDRVAAESK  QLK  +D 
Sbjct: 121 APIATKRRRLMVLFEDEDDIGMEKEEIGVVKRRLVKKLGDDFDRVAAESKRSQLKGLKDR 180

Query: 181 SSEINGVCESVMKIVGEINDENTRGKKVNTERKRKSGGKVETGSVSGTRTSPRLA 227
           SSEINGV ESVMKIV EIN+ENT+ KK N ERK K+GG VE+ SVSG+R+SPRLA
Sbjct: 181 SSEINGVNESVMKIVEEINNENTKVKKTNIERKGKTGGNVESVSVSGSRSSPRLA 234

[Close]
BLAST of Carg19240 vs. TrEMBL
Match: tr|A0A0D2SKK6|A0A0D2SKK6_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_005G201200 PE=4 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 5.6e-41
Identity = 133/232 (57.33%), Postives = 161/232 (69.40%), Query Frame = 0 

Query: 1   MVVPLGPGKFYGSSLPRPRYYTDVKLNNERIDPPTPVLDPLLSWANEAHWSMGGLSFNRL 60
           MVVPLGPGKFYGSSLPRPR YT+ + N+ER++PP PVLDPLLSWANEAHWSMGGLSF RL
Sbjct: 1   MVVPLGPGKFYGSSLPRPRIYTETRFNSERVNPPVPVLDPLLSWANEAHWSMGGLSFKRL 60

Query: 61  RLQGRIEGNVHKLRAEREKVV-KLDSAPKRSNPDDXXXXXXXXXXXXXXXXXXXXXXXXX 120
           RLQGRIEGNV +L+A+R+K +   D  PK++N D         XXXXXXXXXXXXXXXXX
Sbjct: 61  RLQGRIEGNVQRLKAQRDKFLNNKDPIPKKNNSD------ASFXXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXKEETGVVKRRLVKKLGDDFDRVAAESKGDQLKRDGSSEINGVC 180
           XXXXXXXXXXX      +EE  V+++  V+KLGDDF+RVA +              +G+ 
Sbjct: 121 XXXXXXXXXXXNEIVMNREEKRVLRKGAVRKLGDDFERVAKDKDSGVASGGKRGFSDGIG 180

Query: 181 ESVMKIVGEINDENTRGKKVNTER----KRKSGGKVETGSVSGTRTSPRLAK 228
             VMKIV E+N E+   KK    R     +K   +V +G+ + TR SPRLAK
Sbjct: 181 IDVMKIVEEVNVESEEIKKKXXXRIVKGLKKGTDEVRSGTGTTTRASPRLAK 226

[Close]
BLAST of Carg19240 vs. TrEMBL
Match: tr|A0A1U8HJU5|A0A1U8HJU5_GOSHI (uncharacterized protein LOC107886778 OS=Gossypium hirsutum OX=3635 GN=LOC107886778 PE=4 SV=1)

HSP 1 Score: 176.4 bits (446), Expect = 7.3e-41
Identity = 133/231 (57.58%), Postives = 164/231 (71.00%), Query Frame = 0 

Query: 1   MVVPLGPGKFYGSSLPRPRYYTDVKLNNERIDPPTPVLDPLLSWANEAHWSMGGLSFNRL 60
           MVVPLGPGKFYGSSLPRPR Y++ + N+ER+DPP PVLDPLLSWANEAHWSMGGLSF RL
Sbjct: 1   MVVPLGPGKFYGSSLPRPRIYSETRFNSERVDPPVPVLDPLLSWANEAHWSMGGLSFKRL 60

Query: 61  RLQGRIEGNVHKLRAEREKVV-KLDSAPKRSNPDDXXXXXXXXXXXXXXXXXXXXXXXXX 120
           RLQGRIEGNV +L+A+R+K +   D  PK++N D          XXXXXXXXXXXXXXXX
Sbjct: 61  RLQGRIEGNVQRLKAQRDKFLNNKDPVPKKNNRD----ASLSPPXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXKEETGVVKRRLVKKLGDDFDRVAAESKGDQLKRDGSSEINGVC 180
           XXXXXXXXXXXXX    +EE  V+++  V+KLGDDF+RVA +              +G+ 
Sbjct: 121 XXXXXXXXXXXXXIVMNREEKRVLRKGAVRKLGDDFERVAKDKDSGVASGGKWGFSDGIG 180

Query: 181 ESVMKIVGEINDEN---TRGKKVNTERKRKSGGKVETGSVSGTRTSPRLAK 228
             VMKIV E+N E+    + KK   +  +K   +V++G+ + TR SPRLAK
Sbjct: 181 IDVMKIVEEVNVESGEIKKKKKRIVKGLKKGTDEVQSGTGTTTRVSPRLAK 227

[Close]
BLAST of Carg19240 vs. TrEMBL
Match: tr|A0A1U8JPR1|A0A1U8JPR1_GOSHI (uncharacterized protein LOC107909289 OS=Gossypium hirsutum OX=3635 GN=LOC107909289 PE=4 SV=1)

HSP 1 Score: 169.9 bits (429), Expect = 6.8e-39
Identity = 138/231 (59.74%), Postives = 170/231 (73.59%), Query Frame = 0 

Query: 1   MVVPLGPGKFYGSSLPRPRYYTDVKLNNERIDPPTPVLDPLLSWANEAHWSMGGLSFNRL 60
           MVVPLGPGKFYGSSLPRPR Y + + N+ER++PP PVLDPLLSWANEAHWSMGGLSF RL
Sbjct: 1   MVVPLGPGKFYGSSLPRPRIYNETRFNSERVNPPVPVLDPLLSWANEAHWSMGGLSFKRL 60

Query: 61  RLQGRIEGNVHKLRAEREKVV-KLDSAPKRSNPDDXXXXXXXXXXXXXXXXXXXXXXXXX 120
           RLQGRIEGNV +L+A+R+K +   D  PK+   + XXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 61  RLQGRIEGNVQRLKAQRDKFINNKDPIPKK---NXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXKEETGVVKRRLVKKLGDDFDRVAAESKGDQLKRDGSSEINGVC 180
           XXXXXXXXXXXXX    +EE  ++++  V+KLGDDF+RVA +              +G+ 
Sbjct: 121 XXXXXXXXXXXXXIVMNREEKRILRKGAVRKLGDDFERVAKDKDSGVASGGKRGFSDGIG 180

Query: 181 ESVMKIVGEIN---DENTRGKKVNTERKRKSGGKVETGSVSGTRTSPRLAK 228
             VMKIV E+N   +E  + KK   +  +K   +V++G+ + TR SPRLAK
Sbjct: 181 IDVMKIVEEVNVESEEIKKKKKRIVKGLKKGTDEVQSGTGTTTRASPRLAK 228

The following BLAST results are available for this feature:
BLAST of Carg19240 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023554607.13.4e-9096.94uncharacterized protein LOC111811804 [Cucurbita pepo subsp. pepo][more]
XP_022952444.11.3e-8996.07uncharacterized protein LOC111455131 [Cucurbita moschata][more]
XP_022969248.12.3e-8695.20uncharacterized protein LOC111468305 [Cucurbita maxima][more]
XP_008455314.12.1e-7172.34PREDICTED: uncharacterized protein LOC103495510 [Cucumis melo][more]
XP_004136827.12.7e-7166.81PREDICTED: uncharacterized protein LOC101207471 [Cucumis sativus] >KGN43619.1 hy... [more]
BLAST of Carg19240 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G28310.16.9e-2947.14unknown protein[more]
AT1G52270.15.7e-0753.85unknown protein[more]
BLAST of Carg19240 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Carg19240 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3C0M4|A0A1S3C0M4_CUCME1.4e-7172.34uncharacterized protein LOC103495510 OS=Cucumis melo OX=3656 GN=LOC103495510 PE=... [more]
tr|A0A0A0K3S4|A0A0A0K3S4_CUCSA1.8e-7166.81Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G048030 PE=4 SV=1[more]
tr|A0A0D2SKK6|A0A0D2SKK6_GOSRA5.6e-4157.33Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_005G201200 PE=4 ... [more]
tr|A0A1U8HJU5|A0A1U8HJU5_GOSHI7.3e-4157.58uncharacterized protein LOC107886778 OS=Gossypium hirsutum OX=3635 GN=LOC1078867... [more]
tr|A0A1U8JPR1|A0A1U8JPR1_GOSHI6.8e-3959.74uncharacterized protein LOC107909289 OS=Gossypium hirsutum OX=3635 GN=LOC1079092... [more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg19240-RACarg19240-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 192..229
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 192..210
NoneNo IPR availablePANTHERPTHR35103FAMILY NOT NAMEDcoord: 1..227

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg19240Cla002268Watermelon (97103) v1carwmB0878
Carg19240Csa7G048030Cucumber (Chinese Long) v2carcuB0891
Carg19240MELO3C018732Melon (DHL92) v3.5.1carmeB0865
Carg19240ClCG07G002870Watermelon (Charleston Gray)carwcgB0855
Carg19240CSPI07G04670Wild cucumber (PI 183967)carcpiB0911
Carg19240Cucsa.147620Cucumber (Gy14) v1carcgyB0997
Carg19240CmaCh11G018790Cucurbita maxima (Rimu)carcmaB1211
Carg19240CmoCh11G019580Cucurbita moschata (Rifu)carcmoB1179
Carg19240CmoCh19G010280Cucurbita moschata (Rifu)carcmoB1183
Carg19240Lsi11G015610Bottle gourd (USVL1VR-Ls)carlsiB795
Carg19240Cp4.1LG04g03090Cucurbita pepo (Zucchini)carcpeB1223
Carg19240Cp4.1LG15g08060Cucurbita pepo (Zucchini)carcpeB1220
Carg19240CsGy7G004240Cucumber (Gy14) v2carcgybB0864
Carg19240MELO3C018732.2Melon (DHL92) v3.6.1carmedB0874
Carg19240CsaV3_7G004470Cucumber (Chinese Long) v3carcucB0915
Carg19240Cla97C07G131200Watermelon (97103) v2carwmbB0918
Carg19240Bhi05G001623Wax gourdcarwgoB1021
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Carg19240Carg19124Silver-seed gourdcarcarB590
The following block(s) are covering this gene:
GeneOrganismBlock
Carg19240Wax gourdcarwgoB1025
Carg19240Silver-seed gourdcarcarB178
Carg19240Cucurbita maxima (Rimu)carcmaB1213
Carg19240Cucurbita maxima (Rimu)carcmaB1214
Carg19240Cucurbita moschata (Rifu)carcmoB1181
Carg19240Cucurbita moschata (Rifu)carcmoB1182
Carg19240Cucurbita pepo (Zucchini)carcpeB1218
Carg19240Cucurbita pepo (Zucchini)carcpeB1222
Carg19240Bottle gourd (USVL1VR-Ls)carlsiB794
Carg19240Watermelon (Charleston Gray)carwcgB0850
Carg19240Watermelon (97103) v1carwmB0882
Carg19240Watermelon (97103) v2carwmbB0912
Carg19240Watermelon (97103) v2carwmbB0913