CU101425 (transcribed_cluster) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CU101425
Type	transcribed_cluster
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	Microtubule-associated protein 6, putative
Location	Chr7 : 2985830 .. 2986350 (+)
Sequence length	531

Genome Viewer

Sequences

The following sequences are available for this feature:

transcribed_cluster sequence

CGCCGGGGGATCCAATACTAATACCAATACCAATTCCATTCGAAGATTTCCCTTTTCCCTTACCCTAAATTCTCTGTCCAGTTCCATCCTCACCATGGTGGTTCCTCTCGGCCCCGGAAAGTTCTACGGCAGCAGCCTCCCTCGTCCTCGCTACTACTCCGACGTTAAGTTCAATGATGAGCGTGTCGATCCACCGACTCCAGTCCTCGATCCACTCCTTTCATGGGCTAACGAGGCTCATTGGTCAATGGGTGGTCTTAGCTTCAATCGCCTCAGGCTTCAAGGTCGGATCGAAGGCAATGTTCACAAACTTCGAACCGAGCGCGAGAAGGTTGCCAAGAAGAAGCTTAAAGCACAAAAACTTGACTCTGCGCCAAAGAGATCTGACCCAGATGCCGGAGCCGATGCCCATCGCCAATTGGAGAAGGCGGGATCTGTAACTCCACCACCGGCACCGATTGCAACCAAGGGACGGCGATTGATGGTTCTGTTTGAAGATGAAGGAACGATATTGGCATGGAAAAGGAAGAG

Library


Library category	ESTs
fruit (8DPP) library	7
gynoecious flower library	4
hermaphrodite flower library	1

Homology

[Close]

BLAST of CU101425 vs. TrEMBL
Match: A0A0A0K3S4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G048030 PE=4 SV=1)

HSP 1 Score: 218.4 bits (555), Expect = 7.0e-54
Identity = 110/139 (79.14%), Postives = 111/139 (79.86%), Query Frame = 2


Query: 95  MVVPLGPGKFYGSSLPRPRYYSDVKFNDERXXXXXXXXXXXXSWANEAHWSMGGLSFNRL 154
           MVVPLGPGKFYGSSLPRPRYYSDVKFNDER            SWANEAHWSMGGLSFNRL
Sbjct: 1   MVVPLGPGKFYGSSLPRPRYYSDVKFNDERVDPPTPVLDPLLSWANEAHWSMGGLSFNRL 60

Query: 155 RLQGRIEGNVHKLRTEREXXXXXXXXXXXXDSAPKRSDPDAGADAHRQLEKAGSVTPPPA 214
           RLQGRIEGNVHKLRTERE            DSAPKRSDPDAGADAHRQL+KA SVTPPPA
Sbjct: 61  RLQGRIEGNVHKLRTEREKVAKKKLKAQKLDSAPKRSDPDAGADAHRQLKKARSVTPPPA 120

Query: 215 PIATKGRRLMVLFEDEGTI 274
           PIATK RRLMVLFEDE  I
Sbjct: 121 PIATKRRRLMVLFEDEDDI 139

Query: 275  334
           
Sbjct: 181  139

Query: 335  394
           
Sbjct: 241  139

Query: 395  454
           
Sbjct: 301  139

Query: 455  512
           
Sbjct: 361  139

[Close]

BLAST of CU101425 vs. TrEMBL
Match: S8DUT5_9LAMI (Uncharacterized protein OS=Genlisea aurea GN=M569_07871 PE=4 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 4.1e-30
Identity = 74/136 (54.41%), Postives = 90/136 (66.18%), Query Frame = 2


Query: 95  MVVPLGPGKFYGSSLPRPRYYSDVKFNDERXXXXXXXXXXXXSWANEAHWSMGGLSFNRL 154
           MVV LGPGKFYGSSLPRPR+Y+DVK++DER            SWA EAHWSMGGLSF+RL
Sbjct: 48  MVVALGPGKFYGSSLPRPRFYNDVKYSDERVDPPPPVTEPFMSWAREAHWSMGGLSFDRL 107

Query: 155 RLQGRIEGNVHKLRTEREXXXXXXXXXXXXDSAPKRSDPDAGADAHRQLEKAGSVTPPPA 214
           RLQGRIEGNV KLR ++E            DS  ++  P   A +  +L++  S  PPPA
Sbjct: 108 RLQGRIEGNVEKLRAQQE------KTLKRRDSNKQQKSPPEAAKSRSRLKETPS--PPPA 167

Query: 215 PIATKGRRLMVLFEDE 274
           PIA K RR++ L ED+
Sbjct: 168 PIAIKRRRVVGLVEDD 175

Query: 275  334
           
Sbjct: 228  175

Query: 335  394
           
Sbjct: 288  175

Query: 395  454
           
Sbjct: 348  175

Query: 455  503
           
Sbjct: 408  175

[Close]

BLAST of CU101425 vs. TrEMBL
Match: T2DMS6_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_004G108100g PE=2 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 7.0e-30
Identity = 74/136 (54.41%), Postives = 82/136 (60.29%), Query Frame = 2


Query: 95  MVVPLGPGKFYGSSLPRPRYYSDVKFNDERXXXXXXXXXXXXSWANEAHWSMGGLSFNRL 154
           MVV LGPGKFYG+SLPRPR Y+DVKFND R            SWA EAHWSMGGLSF RL
Sbjct: 1   MVVSLGPGKFYGTSLPRPRIYTDVKFNDHRVDPPLPVTDPFMSWAQEAHWSMGGLSFKRL 60

Query: 155 RLQGRIEGNVHKLRTEREXXXXXXXXXXXXDSAPKRSDPDAGADAHRQLEKAGSVTPPPA 214
           RLQG+IEGNVHKLR++RE              AP               E+A S +PPPA
Sbjct: 61  RLQGKIEGNVHKLRSQREKVQSLSPAPAHSVLAPS--------------ERASSPSPPPA 120

Query: 215 PIATKGRRLMVLFEDE 274
           P+ TK RR M L  DE
Sbjct: 121 PVVTKRRRYMDLIVDE 122

Query: 275  334
           
Sbjct: 181  122

Query: 335  394
           
Sbjct: 241  122

Query: 395  454
           
Sbjct: 301  122

Query: 455  503
           
Sbjct: 361  122

[Close]

BLAST of CU101425 vs. TrEMBL
Match: W9R4I2_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_004788 PE=4 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 7.0e-30
Identity = 71/136 (52.21%), Postives = 86/136 (63.24%), Query Frame = 2


Query: 95  MVVPLGPGKFYGSSLPRPRYYSDVKFNDERXXXXXXXXXXXXSWANEAHWSMGGLSFNRL 154
           M+V LGPGKFYG+SLPRPR+Y+DVKFNDER            SWANEAHWSMGGLSF RL
Sbjct: 1   MMVSLGPGKFYGTSLPRPRFYTDVKFNDERVDPPTPVLDPLLSWANEAHWSMGGLSFKRL 60

Query: 155 RLQGRIEGNVHKLRTEREXXXXXXXXXXXXDSAPKRSDPDAGADAHRQLEKAGSVTPPPA 214
           R QGRIEG+V KLR ERE             +    +  D    + R++  +   +PPPA
Sbjct: 61  RFQGRIEGSVSKLRAEREKLERKRKKEGKQTAGSSSNGSDL-VGSERKMVDSDEDSPPPA 120

Query: 215 PIATKGRRLMVLFEDE 274
           PIATK RR M L +++
Sbjct: 121 PIATKRRRFMDLIDED 135

Query: 275  334
           
Sbjct: 181  135

Query: 335  394
           
Sbjct: 241  135

Query: 395  454
           
Sbjct: 301  135

Query: 455  503
           
Sbjct: 361  135

[Close]

BLAST of CU101425 vs. TrEMBL
Match: B9N5V5_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0013s13430g PE=4 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 7.0e-30
Identity = 71/136 (52.21%), Postives = 86/136 (63.24%), Query Frame = 2


Query: 95  MVVPLGPGKFYGSSLPRPRYYSDVKFNDERXXXXXXXXXXXXSWANEAHWSMGGLSFNRL 154
           MVVPLGPGKFYGS+LPRPR Y+DV+++ ER            SWA+EAHWSMGGLSFNRL
Sbjct: 1   MVVPLGPGKFYGSTLPRPRIYTDVRYSAERVDPPAPVMDPFLSWAHEAHWSMGGLSFNRL 60

Query: 155 RLQGRIEGNVHKLRTEREXXXXXXXXXXXXDSAPKRSDPDAGADAHRQLEKAGSVTPPPA 214
           R QGRIEGN  KLR  RE             ++PK+ D        R  ++ GSV+PPPA
Sbjct: 61  RYQGRIEGNTEKLRKLRE-----KKIKLLAKTSPKKKDLAPDGQKERNNKRGGSVSPPPA 120

Query: 215 PIATKGRRLMVLFEDE 274
           P  TK RR + L ++E
Sbjct: 121 PQVTKKRRFLQLIDEE 131

Query: 275  334
           
Sbjct: 181  131

Query: 335  394
           
Sbjct: 241  131

Query: 395  454
           
Sbjct: 301  131

Query: 455  503
           
Sbjct: 361  131

[Close]

BLAST of CU101425 vs. NCBI nr
Match: gi|449438098|ref|XP_004136827.1| (PREDICTED: uncharacterized protein LOC101207471 [Cucumis sativus])

HSP 1 Score: 217.2 bits (552), Expect = 2.2e-53
Identity = 110/139 (79.14%), Postives = 111/139 (79.86%), Query Frame = 2


Query: 95  MVVPLGPGKFYGSSLPRPRYYSDVKFNDERXXXXXXXXXXXXSWANEAHWSMGGLSFNRL 154
           MVVPLGPGKFYGSSLPRPRYYSDVKFNDER            SWANEAHWSMGGLSFNRL
Sbjct: 1   MVVPLGPGKFYGSSLPRPRYYSDVKFNDERVDPPTPVLDPLLSWANEAHWSMGGLSFNRL 60

Query: 155 RLQGRIEGNVHKLRTEREXXXXXXXXXXXXDSAPKRSDPDAGADAHRQLEKAGSVTPPPA 214
           RLQGRIEGNVHKLRTERE            DSAPKRSDPDAGADAHRQL+KA SVTPPPA
Sbjct: 61  RLQGRIEGNVHKLRTEREKVAKKKLKAQKLDSAPKRSDPDAGADAHRQLKKARSVTPPPA 120

Query: 215 PIATKGRRLMVLFEDEGTI 274
           PIATK RRLMVLFEDE  I
Sbjct: 121 PIATKRRRLMVLFEDEDDI 139

Query: 275  334
           
Sbjct: 181  139

Query: 335  394
           
Sbjct: 241  139

Query: 395  454
           
Sbjct: 301  139

Query: 455  512
           
Sbjct: 361  139

[Close]

BLAST of CU101425 vs. NCBI nr
Match: gi|659110606|ref|XP_008455314.1| (PREDICTED: uncharacterized protein LOC103495510 [Cucumis melo])

HSP 1 Score: 211.1 bits (536), Expect = 1.6e-51
Identity = 105/139 (75.54%), Postives = 109/139 (78.42%), Query Frame = 2


Query: 95  MVVPLGPGKFYGSSLPRPRYYSDVKFNDERXXXXXXXXXXXXSWANEAHWSMGGLSFNRL 154
           MVVPLGPGKFYGSSLPRPRYY+DVK NDER            SWANEAHWSMGGLSFNRL
Sbjct: 1   MVVPLGPGKFYGSSLPRPRYYTDVKLNDERVDPPTPVLDPLLSWANEAHWSMGGLSFNRL 60

Query: 155 RLQGRIEGNVHKLRTEREXXXXXXXXXXXXDSAPKRSDPDAGADAHRQLEKAGSVTPPPA 214
           RLQGRIEGNVHKLR ERE            DSAPKRSDPDAGADAHRQL+KA SVTPPPA
Sbjct: 61  RLQGRIEGNVHKLRVEREKVAKKKLKAEKLDSAPKRSDPDAGADAHRQLKKARSVTPPPA 120

Query: 215 PIATKGRRLMVLFEDEGTI 274
           P+ATK RRLMVLFEDE  +
Sbjct: 121 PVATKRRRLMVLFEDEDDV 139

Query: 275  334
           
Sbjct: 181  139

Query: 335  394
           
Sbjct: 241  139

Query: 395  454
           
Sbjct: 301  139

Query: 455  512
           
Sbjct: 361  139

[Close]

BLAST of CU101425 vs. NCBI nr
Match: gi|593703547|ref|XP_007152176.1| (hypothetical protein PHAVU_004G108100g [Phaseolus vulgaris])

HSP 1 Score: 138.7 bits (348), Expect = 1.0e-29
Identity = 74/136 (54.41%), Postives = 82/136 (60.29%), Query Frame = 2


Query: 95  MVVPLGPGKFYGSSLPRPRYYSDVKFNDERXXXXXXXXXXXXSWANEAHWSMGGLSFNRL 154
           MVV LGPGKFYG+SLPRPR Y+DVKFND R            SWA EAHWSMGGLSF RL
Sbjct: 1   MVVSLGPGKFYGTSLPRPRIYTDVKFNDHRVDPPLPVTDPFMSWAQEAHWSMGGLSFKRL 60

Query: 155 RLQGRIEGNVHKLRTEREXXXXXXXXXXXXDSAPKRSDPDAGADAHRQLEKAGSVTPPPA 214
           RLQG+IEGNVHKLR++RE              AP               E+A S +PPPA
Sbjct: 61  RLQGKIEGNVHKLRSQREKVQSLSPAPAHSVLAPS--------------ERASSPSPPPA 120

Query: 215 PIATKGRRLMVLFEDE 274
           P+ TK RR M L  DE
Sbjct: 121 PVVTKRRRYMDLIVDE 122

Query: 275  334
           
Sbjct: 181  122

Query: 335  394
           
Sbjct: 241  122

Query: 395  454
           
Sbjct: 301  122

Query: 455  503
           
Sbjct: 361  122

[Close]

BLAST of CU101425 vs. NCBI nr
Match: gi|527198948|gb|EPS66908.1| (hypothetical protein M569_07871 [Genlisea aurea])

HSP 1 Score: 137.9 bits (346), Expect = 1.7e-29
Identity = 74/136 (54.41%), Postives = 90/136 (66.18%), Query Frame = 2


Query: 95  MVVPLGPGKFYGSSLPRPRYYSDVKFNDERXXXXXXXXXXXXSWANEAHWSMGGLSFNRL 154
           MVV LGPGKFYGSSLPRPR+Y+DVK++DER            SWA EAHWSMGGLSF+RL
Sbjct: 48  MVVALGPGKFYGSSLPRPRFYNDVKYSDERVDPPPPVTEPFMSWAREAHWSMGGLSFDRL 107

Query: 155 RLQGRIEGNVHKLRTEREXXXXXXXXXXXXDSAPKRSDPDAGADAHRQLEKAGSVTPPPA 214
           RLQGRIEGNV KLR ++E            DS  ++  P   A +  +L++  S  PPPA
Sbjct: 108 RLQGRIEGNVEKLRAQQE------KTLKRRDSNKQQKSPPEAAKSRSRLKETPS--PPPA 167

Query: 215 PIATKGRRLMVLFEDE 274
           PIA K RR++ L ED+
Sbjct: 168 PIAIKRRRVVGLVEDD 175

Query: 275  334
           
Sbjct: 228  175

Query: 335  394
           
Sbjct: 288  175

Query: 395  454
           
Sbjct: 348  175

Query: 455  503
           
Sbjct: 408  175

[Close]

BLAST of CU101425 vs. NCBI nr
Match: gi|703073457|ref|XP_010089552.1| (hypothetical protein L484_004788 [Morus notabilis])

HSP 1 Score: 137.5 bits (345), Expect = 2.2e-29
Identity = 71/136 (52.21%), Postives = 86/136 (63.24%), Query Frame = 2


Query: 95  MVVPLGPGKFYGSSLPRPRYYSDVKFNDERXXXXXXXXXXXXSWANEAHWSMGGLSFNRL 154
           M+V LGPGKFYG+SLPRPR+Y+DVKFNDER            SWANEAHWSMGGLSF RL
Sbjct: 1   MMVSLGPGKFYGTSLPRPRFYTDVKFNDERVDPPTPVLDPLLSWANEAHWSMGGLSFKRL 60

Query: 155 RLQGRIEGNVHKLRTEREXXXXXXXXXXXXDSAPKRSDPDAGADAHRQLEKAGSVTPPPA 214
           R QGRIEG+V KLR ERE             +    +  D    + R++  +   +PPPA
Sbjct: 61  RFQGRIEGSVSKLRAEREKLERKRKKEGKQTAGSSSNGSDL-VGSERKMVDSDEDSPPPA 120

Query: 215 PIATKGRRLMVLFEDE 274
           PIATK RR M L +++
Sbjct: 121 PIATKRRRFMDLIDED 135

Query: 275  334
           
Sbjct: 181  135

Query: 335  394
           
Sbjct: 241  135

Query: 395  454
           
Sbjct: 301  135

Query: 455  503
           
Sbjct: 361  135

The following BLAST results are available for this feature:

BLAST of CU101425 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K3S4_CUCSA	7.0e-54	79.14	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G048030 PE=4 SV=1	[more]
S8DUT5_9LAMI	4.1e-30	54.41	Uncharacterized protein OS=Genlisea aurea GN=M569_07871 PE=4 SV=1	[more]
T2DMS6_PHAVU	7.0e-30	54.41	Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_004G108100g PE=2 SV=1	[more]
W9R4I2_9ROSA	7.0e-30	52.21	Uncharacterized protein OS=Morus notabilis GN=L484_004788 PE=4 SV=1	[more]
B9N5V5_POPTR	7.0e-30	52.21	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0013s13430g PE=4 SV=1	[more]

BLAST of CU101425 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449438098\|ref\|XP_004136827.1\|	2.2e-53	79.14	PREDICTED: uncharacterized protein LOC101207471 [Cucumis sativus]	[more]
gi\|659110606\|ref\|XP_008455314.1\|	1.6e-51	75.54	PREDICTED: uncharacterized protein LOC103495510 [Cucumis melo]	[more]
gi\|593703547\|ref\|XP_007152176.1\|	1.0e-29	54.41	hypothetical protein PHAVU_004G108100g [Phaseolus vulgaris]	[more]
gi\|527198948\|gb\|EPS66908.1\|	1.7e-29	54.41	hypothetical protein M569_07871 [Genlisea aurea]	[more]
gi\|703073457\|ref\|XP_010089552.1\|	2.2e-29	52.21	hypothetical protein L484_004788 [Morus notabilis]	[more]

Annotated Terms

The following terms have been associated with this transcribed_cluster:

Vocabulary: **INTERPRO**
Term	Definition

Relationships

This transcribed_cluster is associated with the following gene feature(s):


Feature Name	Unique Name	Type
Csa7G048030	Csa7G048030	gene

The following EST feature(s) are a part of this transcribed_cluster:


Feature Name	Unique Name	Type
FKNP3UI02K8CGS	FKNP3UI02K8CGS	EST
FKNP3UI02K99LY	FKNP3UI02K99LY	EST
FKNP3UI02LOIX5	FKNP3UI02LOIX5	EST
FKNP3UI02MOYQD	FKNP3UI02MOYQD	EST
FKNP3UI02NB8TU	FKNP3UI02NB8TU	EST
FKNP3UI02OKMVW	FKNP3UI02OKMVW	EST
FKNP3UI02OVTE4	FKNP3UI02OVTE4	EST
G0004147	G0004147	EST
G0019564	G0019564	EST
G0086658	G0086658	EST
G0102583	G0102583	EST
H0041791	H0041791	EST

InterPro

Analysis Name: InterPro Annotations of cucumber unigene v3
Date Performed: 2016-11-16


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR35103	FAMILY NOT NAMED	coord: 1..136 score: 3.1