MELO3C005958.2 (gene) Melon (DHL92) v3.6.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C005958.2
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.6.1)
Description	Holliday junction resolvase-like protein
Location	chr06 : 214446 .. 219344 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCCAAGTATTGTATTGTTTAAGGCGAAAGAAGAATGTATTATTGTCATATATTCTATAGGCATAGATTTGAAACAATTGATCGATTGGAATTATGATAAAGGTTTGAATAAATAAAGAGTAATGGAAAAATTGAGGATTTTGGCGGGGGGAGGGGTTGTGATTTGTGAAAGAGCTCCGATCCATTGTTTATGTTGGGTTTTGGAATCCCCAATTCCCCCAATTCTCCCAACCATGTTTACGTTGTTGTGTGGACAATGTTTCCAATTCCAAGCCTTTCAGTTTCCGTTGCAAAGCCACAGATTACTTCACTCCCTCCATCCTCATCTCCCTCCTCCATCTCCACCAGCCCTATTTTCCAAATCCCACAACAACAACCCATTTTCTTCCATTGAACTTCCTCCCAACGCCCTCCGCCGCAAGCTCGATCCTCACTGGAGAGGAGGTTTCAGTCTAGGTGTCGACCTCGGAACCTCTCGCACTGGACTTGCTCTTAGTAAAGGCTTCTCCATTCGTCCTCTTACCGTAATTTTTTTTTCATTCTTCCCTTTATGCATTTCTCTCTACCTACTATTCTCACCACATTCATCATTCTACCTCTCCACTCTTTTCTGCATATTTTCATTTTCTCCTCAATTTTTCCTTTTTTTTTTTTTTTTAACTCAATCTTGATCCATGTTCTTATTCAATTTCATTTCTTTAACTGTTTATAATGTGGCCAACGGCGGACTGCTGTTTATTATATTGAAACTATCCTACGTTTGGGATTCATGATTTCTTTTGCTGCCTTAGGTTCTAGAGTTGCGAGGACAAAAGCTTGAGGCTAAGCTCATTCAGATTGCTGAACAGGAAGTATATATCTCTCTCCCTCTTCGACCATCTTCCTACTGAAAATGCTATCAACATGTTGGAAATTTATTTCTTCTTTTTACTTGCACATTAATTGATGGGAAATAAACTGTAGGAGGCTGATGAATTTATTATTGGACTTCCTAAATCATGCGATGGGAAAGAGACACCTCAGTCAAACAAAATTCGTAGTATTGCCGGAAGGGTGGCAGCCCGAGCAGCTGAAAGGTGAAATACACCGAATGCTTGTACTGCCTCTCCTATGTCTTTTGTTCTGTACTAATACTGCTTTTAGTTTAGGGGCTGGAGAGTTTATTTGTATGATGAACATGGGACAACAGCAGAAGCGGAAAGCCATATGATTTCCAAGTAATGTTGTCCTCAACACTCACTTATGTTGTCTTTGTTTAATATTGTTTCCTTGGATCCTATCCTATAAATTTTGGTTCATCTCCTTTATCAGTATTGTTAATATGGATTCTGTTGCCTGTAAACTATATTGCACTTAGGAGCTGTTTGGAGAGCTAGAATGTAGTGATTTACTGGGTATCAGAGGAGTATTAGGTATCATGAATTTATCAAGGTGATGCAGACAATTGGTTGTTAATTGCTATGGTAGGAATGGAGGAGATGGACACTGAGATAAAAAGGTACAAAAAATTGTCCAAAATGGAAAAGAAAACGAAACATTTAAGAAGTGCAGTTATCACCGGTAAATAAGAAATATATGGCTTGAGGATTTAATGGTCAACGAGGTGGCGGTGACCACATTCTGGTTTAATTGCCCAAAATAATCAGTTGGTTTCCAATTATATTTCCCTTCATTCCAAATAGGCAGACTAGTGCTCAAACCAACCCCAAGAGCATTGGGATGGAATCATCTACTGTTTGTGGTAGAAACTTGTTGACGAAAGCTCTTTTCTGTGGCTTGAATGTCGCTCAATGTTTGCAAAGCATTCCTTTGACATTTATGGCTGATAAAGAACAACAAATTTTTTGAAGAGAAATATGAGTGAACAGATTTGTTGGATTTAGTACATCTCCATATTTTCTTTTTTTAATTACTCTGAGTTTCCATCTATAGCTAGTTGGGAATCACTCTCCTTGGCTTGGGCTGGAGGACTCGTCACCTTTGGTGCAGTCTTCTAATCAATTGGAGTTCACCATTTCCTACTAAAAAAAGAAAAGGAGAATTTGACAAAGGCAAACAAAATCTGTAAGACTTGAGATAAAATGAATACCTTTGATGGAAACCTGGATTTTTTTTATTGCAATTGTGAAAATAGGGGTTGAAACATCTTATAGTTTCTAAATTTTTCTTCTTTTCTAGGAGAATTGGTGGCATAACGACCCTATTAGTGGTCATTGTCATAATCTTCTACCGAAGCTCAAAGGTTTTAAGTTGGCTTTTAAAGCATGGAACTCAACCTTTGGCTGTCTCTCTAATATTAAAACTAATCTCCGGAAGACCCTTGCTACGCTCAATTTTCTGGAAGATCAATGGTCTCTCGATTCCCCATCCTTTCAAAAGCACACTGAAATTAGCGCAGAGCTTTTTAAGTCCAAGTAGTTGGCTGAGTGATGAAGCTCAACTTATTTCAATCAAATCATGCCTAGTAAGAAATAGTAGGAAAAACACCATCTGGATCCTTGGTAAATATAGGTTCAACAATTTAAATGACAAAGAAATAGAAGAGGGCTTTGTTGATTTCTATAAACAGCTACCAAGAAAGCCGGTTTGAGATTCACCCCACACACAAAATGGTTGGGGATTACAAACCAAACGCTCTTATTAGATATTTATACAAGATTTTAGCAATAGTTTTCACTTAGAAGTTGAAGAAAGCTATTCCTTATACCATAACTAAATTCCAAACAGCCTTTGTGGCAAATAAGATAAATCATAGATACTTCACTTATTGCAAATTAGCTTATTGATGAATGAGGGAGCAAAGAAAAAGTAAGATTGAATGACGTGAATGATGGAGAACCTAGTCAATGACTAGAAATTTTGATACTCATGCAAATTTCTATATGAAACTGATGGAGAATGGACTCGTTTCTTGTGAGGGTTGTTGCATGGGTAGCAACACATTTTTGTGGCCTGTAATAATTGATGTTATCAGGTTTCGTTTTGCTTTTTTCACTTAATGGAAGAGAAGTGTAGAATGGGACAGCTTATATTTCAAATTGGCCTGGCGGCTGTTTTATTTTCTTTATGCAAATTAGGTGCATTGTTCACATGAGAAAAAAAAAATTGTTGTCCCACTAGTATTGGAAAGACTTCTTATTTTCTTTTACATATTTCTACTGTGGTTCTCTCTCAGTGTAAATTTTATGGCTCCCAGACCCTATCCATTCAACCGCTATGGTTAGATTGTTTGTTGCATCGACAGGAAGAACTCTGTAATTTTTCAGGCTTGTAGTCGGCTTTCCTACCCCTCTTTCCTCCACTTCTTTTGTAGTTTGAATGATCTATGAAATTGGTCGGTTTCTTATTGAAAAATAAAATAGTAATATCTTGTATCAGCAGATCTATACTTCTCTATTTGGATTGGTCACATATATCACGTATCATAATGGGGAATTAATTTTATTTTTTAATGTTTTCTTTAGGGGTCTCAATAAATCTACTAGGCAGAAGAAGATTGATGCCTATGCTGCCATGGTAAAGTGGGGGAATATTGTCATGTTTTTTAATATTGTGATGATAATAAATGCAGCAGTCCAGTCGTGTGTTCTTTTAAAAATAATTGTCTCTGACATTTTACTTTCTTTATTTGACGCAGATGGTACTAGAGAGATATTTTCTCATGTCAGGCCAGGGAACCGAACTTTTAGTGCCCAAGAGTCTAGTCTTACAAGATAAACTTATCGAGGGACCACCTACAGACCCAGACTTTAAGGATTGAGGATGTGCTTCAGGCCAGGAAAAAATAATCTGGGAGAGGCCCTTGGGGTATTTTTCTCTTTGACGGATAACAAAATTGCTATCAAACAAAGGGTATTTATTACTGTTGAAGTGGAAGAGAGCCGCAACCGACTTAGAAATGGAGGGTTACTTCCTCAAAGCATGGTCACGGAATTAGGTGAAAAGAGATACCGCTGTTCCTAATGAAGGCTCAATTGAAGGTTGCGGGTTGTGAGATGATGACGACGACGACGCTTTTGACATTATATCTTTATAACAATCTTGTCAGAATCTGTCCTCACATATTGAATTCACCTACACACTTCGGTTAGTTAAGGATGGGATTTGCTTTGGTCCGTCCTATGCACTTGTGCTTCTCCTTGATCGCCGAATCTCGTATGTACTTGGTTGAAATTATTTCTAAACGACGAAATTGATTAGATGCTGCAGTCATAATGAGATTTAAAAATGGCGCTTTGCTAAGTTAATACTGTGGAAAAGCGTCTAAAGGCCTAGACAGTCTCCTAATTTCATGCTTGAGGACTCTTCGTCGGCATCTCCATGGGTTAGAGTCTTTTACCTTTAGATGCCATTTTGCGTTGGCTAATTTTTATGGGAGATCTTTACTATTTTATAAACAAAGATCTTAGGAATCCCTGAAATATCAATAATCCTATATGATCCATCATTCGTTTTAAAATTATTGTGATTTTGGGTAATAATGGGCAAGTAGAGATGATCTAAACATTGGTAGTAATAGTTGCTATCTGTGATGGTGCCTCTTGCACTCCATTTACTTTTCTTAGAAGCCATAATCCATTTTTCCTTACTCGAAAATTGGGTGAGGGAATTCTAATATTTGGCTCAACCAATATCCAGTGGATCTTCGTCAGTGAAAGGCACTATATTCTTCTTGCTCGGTGGTGGACGGCCACCATGGACACCTCTTAACAGAATGATCCAGTCAAGAAAGCAAATCATCTCTTAATTCTTCTTTTGGTAACACCATCCATCACTTTTTTTTAATCTCTCAGAAGCCAAGCCTTGCCACATGTTATGCTTCCCACTCAATTATAAACTTATTGAATTCTTTTATCTCGTTCTAATCAACAGTAGATCCTGGCTAAATTAGCACCTTTAT

mRNA sequence

CCCAAGTATTGTATTGTTTAAGGCGAAAGAAGAATGTATTATTGTCATATATTCTATAGGCATAGATTTGAAACAATTGATCGATTGGAATTATGATAAAGGTTTGAATAAATAAAGAGTAATGGAAAAATTGAGGATTTTGGCGGGGGGAGGGGTTGTGATTTGTGAAAGAGCTCCGATCCATTGTTTATGTTGGGTTTTGGAATCCCCAATTCCCCCAATTCTCCCAACCATGTTTACGTTGTTGTGTGGACAATGTTTCCAATTCCAAGCCTTTCAGTTTCCGTTGCAAAGCCACAGATTACTTCACTCCCTCCATCCTCATCTCCCTCCTCCATCTCCACCAGCCCTATTTTCCAAATCCCACAACAACAACCCATTTTCTTCCATTGAACTTCCTCCCAACGCCCTCCGCCGCAAGCTCGATCCTCACTGGAGAGGAGGTTTCAGTCTAGGTGTCGACCTCGGAACCTCTCGCACTGGACTTGCTCTTAGTAAAGGCTTCTCCATTCGTCCTCTTACCGTTCTAGAGTTGCGAGGACAAAAGCTTGAGGCTAAGCTCATTCAGATTGCTGAACAGGAAGAGGCTGATGAATTTATTATTGGACTTCCTAAATCATGCGATGGGAAAGAGACACCTCAGTCAAACAAAATTCGTAGTATTGCCGGAAGGGTGGCAGCCCGAGCAGCTGAAAGGGGCTGGAGAGTTTATTTGTATGATGAACATGGGACAACAGCAGAAGCGGAAAGCCATATGATTTCCAAGCAGACTAGTGCTCAAACCAACCCCAAGAGCATTGGGATGGAATCATCTACTGAGAATTGGTGGCATAACGACCCTATTAGTGGTCATTGTCATAATCTTCTACCGAAGCTCAAAGGTTTTAAGTTGGCTTTTAAAGCATGGAACTCAACCTTTGGCTGTCTCTCTAATATTAAAACTAATCTCCGGAAGACCCTTGCTACGCTCAATTTTCTGGAAGATCAATGGTCTCTCGATTCCCCATCCTTTCAAAAGCACACTGAAATTAGCGCAGAGCTTTTTAAGTCCAAGGGTCTCAATAAATCTACTAGGCAGAAGAAGATTGATGCCTATGCTGCCATGATGGTACTAGAGAGATATTTTCTCATGTCAGGCCAGGGAACCGAACTTTTAGTGCCCAAGAGTCTAGTCTTACAAGATAAACTTATCGAGGGACCACCTACAGACCCAGACTTTAAGGATTGAGGATGTGCTTCAGGCCAGGAAAAAATAATCTGGGAGAGGCCCTTGGGGTATTTTTCTCTTTGACGGATAACAAAATTGCTATCAAACAAAGGGTATTTATTACTGTTGAAGTGGAAGAGAGCCGCAACCGACTTAGAAATGGAGGGTTACTTCCTCAAAGCATGGTCACGGAATTAGGTGAAAAGAGATACCGCTGTTCCTAATGAAGGCTCAATTGAAGGTTGCGGGTTGTGAGATGATGACGACGACGACGCTTTTGACATTATATCTTTATAACAATCTTGTCAGAATCTGTCCTCACATATTGAATTCACCTACACACTTCGGTTAGTTAAGGATGGGATTTGCTTTGGTCCGTCCTATGCACTTGTGCTTCTCCTTGATCGCCGAATCTCGTATGTACTTGGTTGAAATTATTTCTAAACGACGAAATTGATTAGATGCTGCAGTCATAATGAGATTTAAAAATGGCGCTTTGCTAAGTTAATACTGTGGAAAAGCGTCTAAAGGCCTAGACAGTCTCCTAATTTCATGCTTGAGGACTCTTCGTCGGCATCTCCATGGGTTAGAGTCTTTTACCTTTAGATGCCATTTTGCGTTGGCTAATTTTTATGGGAGATCTTTACTATTTTATAAACAAAGATCTTAGGAATCCCTGAAATATCAATAATCCTATATGATCCATCATTCGTTTTAAAATTATTGTGATTTTGGGTAATAATGGGCAAGTAGAGATGATCTAAACATTGGTAGTAATAGTTGCTATCTGTGATGGTGCCTCTTGCACTCCATTTACTTTTCTTAGAAGCCATAATCCATTTTTCCTTACTCGAAAATTGGGTGAGGGAATTCTAATATTTGGCTCAACCAATATCCAGTGGATCTTCGTCAGTGAAAGGCACTATATTCTTCTTGCTCGGTGGTGGACGGCCACCATGGACACCTCTTAACAGAATGATCCAGTCAAGAAAGCAAATCATCTCTTAATTCTTCTTTTGGTAACACCATCCATCACTTTTTTTTAATCTCTCAGAAGCCAAGCCTTGCCACATGTTATGCTTCCCACTCAATTATAAACTTATTGAATTCTTTTATCTCGTTCTAATCAACAGTAGATCCTGGCTAAATTAGCACCTTTAT

Coding sequence (CDS)

ATGGAAAAATTGAGGATTTTGGCGGGGGGAGGGGTTGTGATTTGTGAAAGAGCTCCGATCCATTGTTTATGTTGGGTTTTGGAATCCCCAATTCCCCCAATTCTCCCAACCATGTTTACGTTGTTGTGTGGACAATGTTTCCAATTCCAAGCCTTTCAGTTTCCGTTGCAAAGCCACAGATTACTTCACTCCCTCCATCCTCATCTCCCTCCTCCATCTCCACCAGCCCTATTTTCCAAATCCCACAACAACAACCCATTTTCTTCCATTGAACTTCCTCCCAACGCCCTCCGCCGCAAGCTCGATCCTCACTGGAGAGGAGGTTTCAGTCTAGGTGTCGACCTCGGAACCTCTCGCACTGGACTTGCTCTTAGTAAAGGCTTCTCCATTCGTCCTCTTACCGTTCTAGAGTTGCGAGGACAAAAGCTTGAGGCTAAGCTCATTCAGATTGCTGAACAGGAAGAGGCTGATGAATTTATTATTGGACTTCCTAAATCATGCGATGGGAAAGAGACACCTCAGTCAAACAAAATTCGTAGTATTGCCGGAAGGGTGGCAGCCCGAGCAGCTGAAAGGGGCTGGAGAGTTTATTTGTATGATGAACATGGGACAACAGCAGAAGCGGAAAGCCATATGATTTCCAAGCAGACTAGTGCTCAAACCAACCCCAAGAGCATTGGGATGGAATCATCTACTGAGAATTGGTGGCATAACGACCCTATTAGTGGTCATTGTCATAATCTTCTACCGAAGCTCAAAGGTTTTAAGTTGGCTTTTAAAGCATGGAACTCAACCTTTGGCTGTCTCTCTAATATTAAAACTAATCTCCGGAAGACCCTTGCTACGCTCAATTTTCTGGAAGATCAATGGTCTCTCGATTCCCCATCCTTTCAAAAGCACACTGAAATTAGCGCAGAGCTTTTTAAGTCCAAGGGTCTCAATAAATCTACTAGGCAGAAGAAGATTGATGCCTATGCTGCCATGATGGTACTAGAGAGATATTTTCTCATGTCAGGCCAGGGAACCGAACTTTTAGTGCCCAAGAGTCTAGTCTTACAAGATAAACTTATCGAGGGACCACCTACAGACCCAGACTTTAAGGATTGA

Protein sequence

MEKLRILAGGGVVICERAPIHCLCWVLESPIPPILPTMFTLLCGQCFQFQAFQFPLQSHRLLHSLHPHLPPPSPPALFSKSHNNNPFSSIELPPNALRRKLDPHWRGGFSLGVDLGTSRTGLALSKGFSIRPLTVLELRGQKLEAKLIQIAEQEEADEFIIGLPKSCDGKETPQSNKIRSIAGRVAARAAERGWRVYLYDEHGTTAEAESHMISKQTSAQTNPKSIGMESSTENWWHNDPISGHCHNLLPKLKGFKLAFKAWNSTFGCLSNIKTNLRKTLATLNFLEDQWSLDSPSFQKHTEISAELFKSKGLNKSTRQKKIDAYAAMMVLERYFLMSGQGTELLVPKSLVLQDKLIEGPPTDPDFKD

Homology

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BLAST of MELO3C005958.2 vs. NCBI nr
Match: XP_008437782.1 (PREDICTED: uncharacterized protein LOC103483114 isoform X1 [Cucumis melo])

HSP 1 Score: 509.2 bits (1310), Expect = 1.2e-140
Identity = 272/368 (73.91%), Postives = 272/368 (73.91%), Query Frame = 0


Query: 1   MEKLRILAGGGVVICERAPIHCLCWVLESPIPPILPTMFTLLCGQCFQFQAFQFPLQSHR 60
           MEKLRILAGGGVVICERAPIHCLCWVLESPIPPILPTMFTLLCGQCFQFQAFQFPLQSHR
Sbjct: 1   MEKLRILAGGGVVICERAPIHCLCWVLESPIPPILPTMFTLLCGQCFQFQAFQFPLQSHR 60

Query: 61  LLHSLHPHLPPPSPPALFSKSHNNNPFSSIELPPNALRRKLDPHWRGGFSLGVDLGTSRT 120
           LLHSLHPHLPPPSPPALFSKSHNNNPFSSIELPPNALRRKLDPHWRGGFSLGVDLGTSRT
Sbjct: 61  LLHSLHPHLPPPSPPALFSKSHNNNPFSSIELPPNALRRKLDPHWRGGFSLGVDLGTSRT 120

Query: 121 GLALSKGFSIRPLTVLELRGQKLEAKLIQIAEQEEADEFIIGLPKSCDGKETPQSNKIRS 180
           GLALSKGFSIRPLTVLELRGQKLEAKLIQIAEQEEADEFIIGLPKSCDGKETPQSNKIRS
Sbjct: 121 GLALSKGFSIRPLTVLELRGQKLEAKLIQIAEQEEADEFIIGLPKSCDGKETPQSNKIRS 180

Query: 181 IAGRVAARAAERGWRVYLYDEHGTTAEAESHMISKQTSAQTNPKSIGMESSTENWWHNDP 240
           IAGRVAARAAERGWRVYLYDEHGTTAEAESHMI                           
Sbjct: 181 IAGRVAARAAERGWRVYLYDEHGTTAEAESHMI--------------------------- 240

Query: 241 ISGHCHNLLPKLKGFKLAFKAWNSTFGCLSNIKTNLRKTLATLNFLEDQWSLDSPSFQKH 300
                                                                       
Sbjct: 241 ------------------------------------------------------------ 272

Query: 301 TEISAELFKSKGLNKSTRQKKIDAYAAMMVLERYFLMSGQGTELLVPKSLVLQDKLIEGP 360
                    SKGLNKSTRQKKIDAYAAMMVLERYFLMSGQGTELLVPKSLVLQDKLIEGP
Sbjct: 301 ---------SKGLNKSTRQKKIDAYAAMMVLERYFLMSGQGTELLVPKSLVLQDKLIEGP 272

Query: 361 PTDPDFKD 369
           PTDPDFKD
Sbjct: 361 PTDPDFKD 272

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BLAST of MELO3C005958.2 vs. NCBI nr
Match: XP_016898999.1 (PREDICTED: uncharacterized protein LOC103483114 isoform X2 [Cucumis melo])

HSP 1 Score: 437.6 bits (1124), Expect = 4.3e-119
Identity = 214/214 (100.00%), Postives = 214/214 (100.00%), Query Frame = 0


Query: 1   MEKLRILAGGGVVICERAPIHCLCWVLESPIPPILPTMFTLLCGQCFQFQAFQFPLQSHR 60
           MEKLRILAGGGVVICERAPIHCLCWVLESPIPPILPTMFTLLCGQCFQFQAFQFPLQSHR
Sbjct: 1   MEKLRILAGGGVVICERAPIHCLCWVLESPIPPILPTMFTLLCGQCFQFQAFQFPLQSHR 60

Query: 61  LLHSLHPHLPPPSPPALFSKSHNNNPFSSIELPPNALRRKLDPHWRGGFSLGVDLGTSRT 120
           LLHSLHPHLPPPSPPALFSKSHNNNPFSSIELPPNALRRKLDPHWRGGFSLGVDLGTSRT
Sbjct: 61  LLHSLHPHLPPPSPPALFSKSHNNNPFSSIELPPNALRRKLDPHWRGGFSLGVDLGTSRT 120

Query: 121 GLALSKGFSIRPLTVLELRGQKLEAKLIQIAEQEEADEFIIGLPKSCDGKETPQSNKIRS 180
           GLALSKGFSIRPLTVLELRGQKLEAKLIQIAEQEEADEFIIGLPKSCDGKETPQSNKIRS
Sbjct: 121 GLALSKGFSIRPLTVLELRGQKLEAKLIQIAEQEEADEFIIGLPKSCDGKETPQSNKIRS 180

Query: 181 IAGRVAARAAERGWRVYLYDEHGTTAEAESHMIS 215
           IAGRVAARAAERGWRVYLYDEHGTTAEAESHMIS
Sbjct: 181 IAGRVAARAAERGWRVYLYDEHGTTAEAESHMIS 214

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BLAST of MELO3C005958.2 vs. NCBI nr
Match: XP_004133768.1 (PREDICTED: uncharacterized protein LOC101219287 isoform X1 [Cucumis sativus] >XP_011650630.1 PREDICTED: uncharacterized protein LOC101219287 isoform X1 [Cucumis sativus] >KGN56353.1 hypothetical protein Csa_3G116900 [Cucumis sativus])

HSP 1 Score: 402.1 bits (1032), Expect = 2.0e-108
Identity = 221/331 (66.77%), Postives = 226/331 (68.28%), Query Frame = 0


Query: 38  MFTLLCGQCFQFQAFQFPLQSHRLLHSLHPHLPPPSPPALFSKSHNNNPFSSIELPPNAL 97
           MFT   GQCFQFQAFQFPLQ+H+LLHSLHPHLPPPS PAL SKSHNNNP SSIELPPNAL
Sbjct: 1   MFTWSSGQCFQFQAFQFPLQTHKLLHSLHPHLPPPSSPALISKSHNNNPISSIELPPNAL 60

Query: 98  RRKLDPHWRGGFSLGVDLGTSRTGLALSKGFSIRPLTVLELRGQKLEAKLIQIAEQEEAD 157
           RRKLDPHWRGGFSLGVDLGTSRTGLALSKGFS RPLTVLELRGQKLEAKLI+IAEQEEAD
Sbjct: 61  RRKLDPHWRGGFSLGVDLGTSRTGLALSKGFSTRPLTVLELRGQKLEAKLIEIAEQEEAD 120

Query: 158 EFIIGLPKSCDGKETPQSNKIRSIAGRVAARAAERGWRVYLYDEHGTTAEAESHMISKQT 217
           EFIIGLPKSCDGKETPQSNKIRSIAGRVAARAAERGWRVYLYDEHGTTAEAESHMI    
Sbjct: 121 EFIIGLPKSCDGKETPQSNKIRSIAGRVAARAAERGWRVYLYDEHGTTAEAESHMI---- 180

Query: 218 SAQTNPKSIGMESSTENWWHNDPISGHCHNLLPKLKGFKLAFKAWNSTFGCLSNIKTNLR 277
                                                                       
Sbjct: 181 ------------------------------------------------------------ 235

Query: 278 KTLATLNFLEDQWSLDSPSFQKHTEISAELFKSKGLNKSTRQKKIDAYAAMMVLERYFLM 337
                                           S+GLNKSTRQKKIDAYAAMMVLERYF  
Sbjct: 241 --------------------------------SRGLNKSTRQKKIDAYAAMMVLERYFST 235

Query: 338 SGQGTELLVPKSLVLQDKLIEGPPTDPDFKD 369
           SGQGTELLVPKSLVLQDKLIEGPPTDPDF+D
Sbjct: 301 SGQGTELLVPKSLVLQDKLIEGPPTDPDFRD 235

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BLAST of MELO3C005958.2 vs. NCBI nr
Match: XP_011650631.1 (PREDICTED: uncharacterized protein LOC101219287 isoform X2 [Cucumis sativus])

HSP 1 Score: 340.9 bits (873), Expect = 5.4e-90
Identity = 170/189 (89.95%), Postives = 175/189 (92.59%), Query Frame = 0


Query: 38  MFTLLCGQCFQFQAFQFPLQSHRLLHSLHPHLPPPSPPALFSKSHNNNPFSSIELPPNAL 97
           MFT   GQCFQFQAFQFPLQ+H+LLHSLHPHLPPPS PAL SKSHNNNP SSIELPPNAL
Sbjct: 1   MFTWSSGQCFQFQAFQFPLQTHKLLHSLHPHLPPPSSPALISKSHNNNPISSIELPPNAL 60

Query: 98  RRKLDPHWRGGFSLGVDLGTSRTGLALSKGFSIRPLTVLELRGQKLEAKLIQIAEQEEAD 157
           RRKLDPHWRGGFSLGVDLGTSRTGLALSKGFS RPLTVLELRGQKLEAKLI+IAEQEEAD
Sbjct: 61  RRKLDPHWRGGFSLGVDLGTSRTGLALSKGFSTRPLTVLELRGQKLEAKLIEIAEQEEAD 120

Query: 158 EFIIGLPKSCDGKETPQSNKIRSIAGRVAARAAERGWRVYLYDEHGTTAEAESHMISKQT 217
           EFIIGLPKSCDGKETPQSNKIRSIAGRVAARAAERGWRVYLYDEHGTTAEAESHMIS+  
Sbjct: 121 EFIIGLPKSCDGKETPQSNKIRSIAGRVAARAAERGWRVYLYDEHGTTAEAESHMISRGL 180

Query: 218 SAQTNPKSI 227
           +  T  K I
Sbjct: 181 NKSTRQKKI 189

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BLAST of MELO3C005958.2 vs. NCBI nr
Match: XP_011650632.1 (PREDICTED: uncharacterized protein LOC101219287 isoform X3 [Cucumis sativus])

HSP 1 Score: 338.2 bits (866), Expect = 3.5e-89
Identity = 167/178 (93.82%), Postives = 171/178 (96.07%), Query Frame = 0


Query: 38  MFTLLCGQCFQFQAFQFPLQSHRLLHSLHPHLPPPSPPALFSKSHNNNPFSSIELPPNAL 97
           MFT   GQCFQFQAFQFPLQ+H+LLHSLHPHLPPPS PAL SKSHNNNP SSIELPPNAL
Sbjct: 1   MFTWSSGQCFQFQAFQFPLQTHKLLHSLHPHLPPPSSPALISKSHNNNPISSIELPPNAL 60

Query: 98  RRKLDPHWRGGFSLGVDLGTSRTGLALSKGFSIRPLTVLELRGQKLEAKLIQIAEQEEAD 157
           RRKLDPHWRGGFSLGVDLGTSRTGLALSKGFS RPLTVLELRGQKLEAKLI+IAEQEEAD
Sbjct: 61  RRKLDPHWRGGFSLGVDLGTSRTGLALSKGFSTRPLTVLELRGQKLEAKLIEIAEQEEAD 120

Query: 158 EFIIGLPKSCDGKETPQSNKIRSIAGRVAARAAERGWRVYLYDEHGTTAEAESHMISK 216
           EFIIGLPKSCDGKETPQSNKIRSIAGRVAARAAERGWRVYLYDEHGTTAEAESHMIS+
Sbjct: 121 EFIIGLPKSCDGKETPQSNKIRSIAGRVAARAAERGWRVYLYDEHGTTAEAESHMISR 178

[Close]

BLAST of MELO3C005958.2 vs. TAIR10
Match: AT1G12244.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein)

HSP 1 Score: 214.2 bits (544), Expect = 1.4e-55
Identity = 140/342 (40.94%), Postives = 175/342 (51.17%), Query Frame = 0


Query: 34  ILPTMFTLLCGQC----FQFQAFQFPLQSH---RLLHSLHP--HLPPPSPPALFSKSHNN 93
           IL   F L    C    F   A  F  Q +    L+H L P  +   P P A+ S     
Sbjct: 7   ILFVFFLLSVAMCSLHSFSSVAISFRTQKYVNTSLVHRLSPIGYRNYPLPWAVTSID--- 66

Query: 94  NPFSSIELPPNALRRKLDPHWRGGFSLGVDLGTSRTGLALSKGFSIRPLTVLELRGQKLE 153
                 E+PPNA+RRK+D +WRGGFSLGVDLG SRTG+A+SKG++++PLTVL+ RGQKLE
Sbjct: 67  ------EIPPNAVRRKIDRNWRGGFSLGVDLGLSRTGIAISKGYTVKPLTVLKSRGQKLE 126

Query: 154 AKLIQIAEQEEADEFIIGLPKSCDGKETPQSNKIRSIAGRVAARAAERGWRVYLYDEHGT 213
            +L++IAE+EEADEFIIGLP+S DGKET QSNKIRS+AGR+A +AAERGWRVY++DEHGT
Sbjct: 127 TRLLEIAEEEEADEFIIGLPRSSDGKETIQSNKIRSVAGRLAIQAAERGWRVYVFDEHGT 186

Query: 214 TAEAESHMISKQTSAQTNPKSIGMESSTENWWHNDPISGHCHNLLPKLKGFKLAFKAWNS 273
           T+EA   MI                                                   
Sbjct: 187 TSEASDRMI--------------------------------------------------- 243

Query: 274 TFGCLSNIKTNLRKTLATLNFLEDQWSLDSPSFQKHTEISAELFKSKGLNKSTRQKKIDA 333
                                                          GL+KS RQ + DA
Sbjct: 247 ---------------------------------------------VMGLSKSERQNRSDA 243

Query: 334 YAAMMVLERYFLMSGQGTELLVPKSLVLQDKLIEGPPTDPDF 367
           YAA+++LERYF   G G E+++PKSL LQ K+  G P DPDF
Sbjct: 307 YAAVILLERYFSTQGLGIEIILPKSLELQAKIKNGAPVDPDF 243

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BLAST of MELO3C005958.2 vs. Swiss-Prot
Match: sp|A1SJC8|YQGF_NOCSJ (Putative pre-16S rRNA nuclease OS=Nocardioides sp. (strain ATCC BAA-499 / JS614) OX=196162 GN=Noca_2408 PE=3 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 2.7e-08
Identity = 44/111 (39.64%), Postives = 60/111 (54.05%), Query Frame = 0


Query: 106 RGGFSLGVDLGTSRTGLALS--KGFSIRPL-TVLELRGQKLEAKLIQIAEQEEAD---EF 165
           R G  +G+D G +R G+A S   GF   P+ TV   +G       I  AE++E     E 
Sbjct: 2   RAGVRIGIDPGDARIGVARSDPSGFLATPVETVRRGKGDLARIGRILAAEEDEGATVLEV 61

Query: 166 IIGLPKSCDGKETPQSNKIRSIAGRVAARAAERGWRVYLYDEHGTTAEAES 211
           ++GLP+S  G+E P + K+R  AGR+AAR A     V L DE  TT  AE+
Sbjct: 62  VVGLPRSLSGREGPAAAKVREFAGRLAARVAP--VPVRLVDERMTTVSAEA 110

[Close]

BLAST of MELO3C005958.2 vs. Swiss-Prot
Match: sp|B8DIJ5|YQGF_DESVM (Putative pre-16S rRNA nuclease OS=Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637) OX=883 GN=DvMF_2352 PE=3 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 3.3e-06
Identity = 33/105 (31.43%), Postives = 57/105 (54.29%), Query Frame = 0


Query: 111 LGVDLGTSRTGLALSK---GFSIRPLTVLELRGQKLEAKLIQIAEQEEADEFIIGLPKSC 170
           LG+D GT RTG+A S      +    T++     +  A+L+ +AE+E A+ +++GLP   
Sbjct: 4   LGIDYGTKRTGVAASDTGGSMAFPRRTIVMTTRDRFFAELLAVAEEERAEAYVVGLPLLH 63

Query: 171 DGKETPQSNKIRSIAGRVAARAAERGWRVYLYDEHGTTAEAESHM 213
           DG +T  + ++R+   R+  R       VYL +E  ++ EAE  +
Sbjct: 64  DGTDTLTTRQVRNFVERLKRRTT---LPVYLMEEFLSSYEAEDDL 105

[Close]

BLAST of MELO3C005958.2 vs. Swiss-Prot
Match: sp|Q3SR28|YQGF_NITWN (Putative pre-16S rRNA nuclease OS=Nitrobacter winogradskyi (strain ATCC 25391 / DSM 10237 / CIP 104748 / NCIMB 11846 / Nb-255) OX=323098 GN=Nwi_2004 PE=3 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 2.2e-05
Identity = 42/127 (33.07%), Postives = 63/127 (49.61%), Query Frame = 0


Query: 104 HWRG-GFSLGVDLGTSRTGLALSKGFSIRPLTVLELRGQKL---EAKLIQIAEQEEADEF 163
           HW   G  +G+DLGT   G+A+S         V  +R +      A+L+ IA +  A+ F
Sbjct: 14  HWPARGALVGLDLGTKTIGVAVSDPDRRLATGVETIRRKTFTADAARLLAIAGERRAEGF 73

Query: 164 IIGLPKSCDGKETPQSNKIRSIAGRVAARAAERGWRVYLYDEHGTTAEAESHMISKQTSA 223
           I+GLP + DG E P++   R+ A R  AR  +  + + L+DE  +TA  E  +I    S 
Sbjct: 74  ILGLPINMDGSEGPRAQSTRAFA-RNLARLTD--FAIGLWDERLSTAAVERELIGLDMSR 133

Query: 224 QTNPKSI 227
               K I
Sbjct: 134 ARRAKVI 137

[Close]

BLAST of MELO3C005958.2 vs. Swiss-Prot
Match: sp|Q1D063|YQGF_MYXXD (Putative pre-16S rRNA nuclease OS=Myxococcus xanthus (strain DK 1622) OX=246197 GN=MXAN_5823 PE=3 SV=1)

HSP 1 Score: 50.1 bits (118), Expect = 6.3e-05
Identity = 33/112 (29.46%), Postives = 54/112 (48.21%), Query Frame = 0


Query: 110 SLGVDLGTSRTGLALSKGFSIRPLTVLELRGQKLE---AKLIQIAEQEEADEFIIGLPKS 169
           ++G+DLGT   G+A+S G  +    +  +R   L+   A L  +A + E    ++GLP +
Sbjct: 3   TMGLDLGTKTIGVAVSDGLGLTAQGITTVRRTSLKADLAALATVASEHEVTHVVLGLPLN 62

Query: 170 CDGKETPQSNKIRSIAGRVAARAAERGWRVYLYDEHGTTAEAESHMISKQTS 219
            DG E P++   R  A  +   A   G  V L+DE  +T  A   ++    S
Sbjct: 63  MDGSEGPRAEASRKFADTL---AQSLGVTVELWDERLSTVAATRTLLEADVS 111

[Close]

BLAST of MELO3C005958.2 vs. Swiss-Prot
Match: sp|C6C125|YQGF_DESAD (Putative pre-16S rRNA nuclease OS=Desulfovibrio salexigens (strain ATCC 14822 / DSM 2638 / NCIB 8403 / VKM B-1763) OX=526222 GN=Desal_1125 PE=3 SV=1)

HSP 1 Score: 49.7 bits (117), Expect = 8.2e-05
Identity = 33/105 (31.43%), Postives = 56/105 (53.33%), Query Frame = 0


Query: 111 LGVDLGTSRTGLALSKGFSI--RPLTVLE-LRGQKLEAKLIQIAEQEEADEFIIGLPKSC 170
           L +D GT R GLA+S    I   P  V+E      + ++L++I E E+  + +IGLP S 
Sbjct: 4   LSIDFGTKRVGLAISDPDQIFAFPYKVMERTTRDAMFSELLEIIENEKVGDIVIGLPLSL 63

Query: 171 DGKETPQSNKIRSIAGRVAARAAERGWRVYLYDEHGTTAEAESHM 213
           DG++T  + ++R+ A  +  R       ++L DE  ++  AE  +
Sbjct: 64  DGEDTLTTRQVRNFAASLERRV---DLPIHLVDERLSSIAAEDEL 105

[Close]

BLAST of MELO3C005958.2 vs. TrEMBL
Match: tr|A0A1S3AUT7|A0A1S3AUT7_CUCME (uncharacterized protein LOC103483114 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103483114 PE=3 SV=1)

HSP 1 Score: 509.2 bits (1310), Expect = 7.6e-141
Identity = 272/368 (73.91%), Postives = 272/368 (73.91%), Query Frame = 0


Query: 1   MEKLRILAGGGVVICERAPIHCLCWVLESPIPPILPTMFTLLCGQCFQFQAFQFPLQSHR 60
           MEKLRILAGGGVVICERAPIHCLCWVLESPIPPILPTMFTLLCGQCFQFQAFQFPLQSHR
Sbjct: 1   MEKLRILAGGGVVICERAPIHCLCWVLESPIPPILPTMFTLLCGQCFQFQAFQFPLQSHR 60

Query: 61  LLHSLHPHLPPPSPPALFSKSHNNNPFSSIELPPNALRRKLDPHWRGGFSLGVDLGTSRT 120
           LLHSLHPHLPPPSPPALFSKSHNNNPFSSIELPPNALRRKLDPHWRGGFSLGVDLGTSRT
Sbjct: 61  LLHSLHPHLPPPSPPALFSKSHNNNPFSSIELPPNALRRKLDPHWRGGFSLGVDLGTSRT 120

Query: 121 GLALSKGFSIRPLTVLELRGQKLEAKLIQIAEQEEADEFIIGLPKSCDGKETPQSNKIRS 180
           GLALSKGFSIRPLTVLELRGQKLEAKLIQIAEQEEADEFIIGLPKSCDGKETPQSNKIRS
Sbjct: 121 GLALSKGFSIRPLTVLELRGQKLEAKLIQIAEQEEADEFIIGLPKSCDGKETPQSNKIRS 180

Query: 181 IAGRVAARAAERGWRVYLYDEHGTTAEAESHMISKQTSAQTNPKSIGMESSTENWWHNDP 240
           IAGRVAARAAERGWRVYLYDEHGTTAEAESHMI                           
Sbjct: 181 IAGRVAARAAERGWRVYLYDEHGTTAEAESHMI--------------------------- 240

Query: 241 ISGHCHNLLPKLKGFKLAFKAWNSTFGCLSNIKTNLRKTLATLNFLEDQWSLDSPSFQKH 300
                                                                       
Sbjct: 241 ------------------------------------------------------------ 272

Query: 301 TEISAELFKSKGLNKSTRQKKIDAYAAMMVLERYFLMSGQGTELLVPKSLVLQDKLIEGP 360
                    SKGLNKSTRQKKIDAYAAMMVLERYFLMSGQGTELLVPKSLVLQDKLIEGP
Sbjct: 301 ---------SKGLNKSTRQKKIDAYAAMMVLERYFLMSGQGTELLVPKSLVLQDKLIEGP 272

Query: 361 PTDPDFKD 369
           PTDPDFKD
Sbjct: 361 PTDPDFKD 272

[Close]

BLAST of MELO3C005958.2 vs. TrEMBL
Match: tr|A0A1S4DSN6|A0A1S4DSN6_CUCME (uncharacterized protein LOC103483114 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103483114 PE=4 SV=1)

HSP 1 Score: 437.6 bits (1124), Expect = 2.8e-119
Identity = 214/214 (100.00%), Postives = 214/214 (100.00%), Query Frame = 0


Query: 1   MEKLRILAGGGVVICERAPIHCLCWVLESPIPPILPTMFTLLCGQCFQFQAFQFPLQSHR 60
           MEKLRILAGGGVVICERAPIHCLCWVLESPIPPILPTMFTLLCGQCFQFQAFQFPLQSHR
Sbjct: 1   MEKLRILAGGGVVICERAPIHCLCWVLESPIPPILPTMFTLLCGQCFQFQAFQFPLQSHR 60

Query: 61  LLHSLHPHLPPPSPPALFSKSHNNNPFSSIELPPNALRRKLDPHWRGGFSLGVDLGTSRT 120
           LLHSLHPHLPPPSPPALFSKSHNNNPFSSIELPPNALRRKLDPHWRGGFSLGVDLGTSRT
Sbjct: 61  LLHSLHPHLPPPSPPALFSKSHNNNPFSSIELPPNALRRKLDPHWRGGFSLGVDLGTSRT 120

Query: 121 GLALSKGFSIRPLTVLELRGQKLEAKLIQIAEQEEADEFIIGLPKSCDGKETPQSNKIRS 180
           GLALSKGFSIRPLTVLELRGQKLEAKLIQIAEQEEADEFIIGLPKSCDGKETPQSNKIRS
Sbjct: 121 GLALSKGFSIRPLTVLELRGQKLEAKLIQIAEQEEADEFIIGLPKSCDGKETPQSNKIRS 180

Query: 181 IAGRVAARAAERGWRVYLYDEHGTTAEAESHMIS 215
           IAGRVAARAAERGWRVYLYDEHGTTAEAESHMIS
Sbjct: 181 IAGRVAARAAERGWRVYLYDEHGTTAEAESHMIS 214

[Close]

BLAST of MELO3C005958.2 vs. TrEMBL
Match: tr|A0A0A0L3L5|A0A0A0L3L5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G116900 PE=3 SV=1)

HSP 1 Score: 402.1 bits (1032), Expect = 1.3e-108
Identity = 221/331 (66.77%), Postives = 226/331 (68.28%), Query Frame = 0


Query: 38  MFTLLCGQCFQFQAFQFPLQSHRLLHSLHPHLPPPSPPALFSKSHNNNPFSSIELPPNAL 97
           MFT   GQCFQFQAFQFPLQ+H+LLHSLHPHLPPPS PAL SKSHNNNP SSIELPPNAL
Sbjct: 1   MFTWSSGQCFQFQAFQFPLQTHKLLHSLHPHLPPPSSPALISKSHNNNPISSIELPPNAL 60

Query: 98  RRKLDPHWRGGFSLGVDLGTSRTGLALSKGFSIRPLTVLELRGQKLEAKLIQIAEQEEAD 157
           RRKLDPHWRGGFSLGVDLGTSRTGLALSKGFS RPLTVLELRGQKLEAKLI+IAEQEEAD
Sbjct: 61  RRKLDPHWRGGFSLGVDLGTSRTGLALSKGFSTRPLTVLELRGQKLEAKLIEIAEQEEAD 120

Query: 158 EFIIGLPKSCDGKETPQSNKIRSIAGRVAARAAERGWRVYLYDEHGTTAEAESHMISKQT 217
           EFIIGLPKSCDGKETPQSNKIRSIAGRVAARAAERGWRVYLYDEHGTTAEAESHMI    
Sbjct: 121 EFIIGLPKSCDGKETPQSNKIRSIAGRVAARAAERGWRVYLYDEHGTTAEAESHMI---- 180

Query: 218 SAQTNPKSIGMESSTENWWHNDPISGHCHNLLPKLKGFKLAFKAWNSTFGCLSNIKTNLR 277
                                                                       
Sbjct: 181 ------------------------------------------------------------ 235

Query: 278 KTLATLNFLEDQWSLDSPSFQKHTEISAELFKSKGLNKSTRQKKIDAYAAMMVLERYFLM 337
                                           S+GLNKSTRQKKIDAYAAMMVLERYF  
Sbjct: 241 --------------------------------SRGLNKSTRQKKIDAYAAMMVLERYFST 235

Query: 338 SGQGTELLVPKSLVLQDKLIEGPPTDPDFKD 369
           SGQGTELLVPKSLVLQDKLIEGPPTDPDF+D
Sbjct: 301 SGQGTELLVPKSLVLQDKLIEGPPTDPDFRD 235

[Close]

BLAST of MELO3C005958.2 vs. TrEMBL
Match: tr|A0A2P4HP09|A0A2P4HP09_QUESU (Putative pre-16s rrna nuclease OS=Quercus suber OX=58331 GN=CFP56_32757 PE=3 SV=1)

HSP 1 Score: 253.4 bits (646), Expect = 7.6e-64
Identity = 159/319 (49.84%), Postives = 178/319 (55.80%), Query Frame = 0


Query: 55  PLQSHRLLHSLHPHLP---PPSPPALFSKSHNNNP----FSSIELPPNALRRKLDPHWRG 114
           PLQ H L  +L  H P   P S P   +K+    P     S  +LPPNAL RK DP+WRG
Sbjct: 13  PLQPHFLSPNLTIHKPLNTPASLPLSSTKTRKYTPTLRAISLQQLPPNALHRKRDPNWRG 72

Query: 115 GFSLGVDLGTSRTGLALSKGFSIRPLTVLELRGQKLEAKLIQIAEQEEADEFIIGLPKSC 174
           GFSLGVDLG SRTGLALSKGFSIRPLTVLELRGQKLE +L+QIA+QEEADEFIIGLPKS 
Sbjct: 73  GFSLGVDLGMSRTGLALSKGFSIRPLTVLELRGQKLELQLLQIAQQEEADEFIIGLPKSS 132

Query: 175 DGKETPQSNKIRSIAGRVAARAAERGWRVYLYDEHGTTAEAESHMISKQTSAQTNPKSIG 234
           DGKETPQSNK+RS+AGR AARAAERGWRVYL DEHGTT EA   MI              
Sbjct: 133 DGKETPQSNKVRSVAGRFAARAAERGWRVYLQDEHGTTTEATDRMI-------------- 192

Query: 235 MESSTENWWHNDPISGHCHNLLPKLKGFKLAFKAWNSTFGCLSNIKTNLRKTLATLNFLE 294
                                                   C+                  
Sbjct: 193 ----------------------------------------CM------------------ 235

Query: 295 DQWSLDSPSFQKHTEISAELFKSKGLNKSTRQKKIDAYAAMMVLERYFLMSGQGTELLVP 354
                                   GL++STRQ KIDAYAAMMVLERYF ++GQ TEL++P
Sbjct: 253 ------------------------GLSRSTRQSKIDAYAAMMVLERYFSLAGQETELVLP 235

Query: 355 KSLVLQDKLIEGPPTDPDF 367
           K+L LQ+KL  GPP D DF
Sbjct: 313 KNLDLQEKLKTGPPRDIDF 235

[Close]

BLAST of MELO3C005958.2 vs. TrEMBL
Match: tr|A0A2P4KL56|A0A2P4KL56_QUESU (Putative pre-16s rrna nuclease OS=Quercus suber OX=58331 GN=CFP56_30511 PE=3 SV=1)

HSP 1 Score: 252.7 bits (644), Expect = 1.3e-63
Identity = 158/319 (49.53%), Postives = 178/319 (55.80%), Query Frame = 0


Query: 55  PLQSHRLLHSLHPHLP---PPSPPALFSKSHNNNP----FSSIELPPNALRRKLDPHWRG 114
           PLQ H L  +   H P   P S P   +K+ N  P     S  +LPPNAL RK DP+WRG
Sbjct: 13  PLQPHFLSPNPTTHKPVNTPASLPLSSTKTRNYTPTLRAISLQQLPPNALHRKRDPNWRG 72

Query: 115 GFSLGVDLGTSRTGLALSKGFSIRPLTVLELRGQKLEAKLIQIAEQEEADEFIIGLPKSC 174
           GFSLGVDLG SRTGLALSKGFSIRPLTVL+LRGQKLE +L+QIA+QEEADEFIIGLPKS 
Sbjct: 73  GFSLGVDLGMSRTGLALSKGFSIRPLTVLDLRGQKLELQLLQIAQQEEADEFIIGLPKSS 132

Query: 175 DGKETPQSNKIRSIAGRVAARAAERGWRVYLYDEHGTTAEAESHMISKQTSAQTNPKSIG 234
           DGKETPQSNK+RS+AGR AARAAERGWRVYL DEHGTT EA   MI              
Sbjct: 133 DGKETPQSNKVRSVAGRFAARAAERGWRVYLQDEHGTTTEATDRMI-------------- 192

Query: 235 MESSTENWWHNDPISGHCHNLLPKLKGFKLAFKAWNSTFGCLSNIKTNLRKTLATLNFLE 294
                                                   C+                  
Sbjct: 193 ----------------------------------------CM------------------ 235

Query: 295 DQWSLDSPSFQKHTEISAELFKSKGLNKSTRQKKIDAYAAMMVLERYFLMSGQGTELLVP 354
                                   GL++STRQ KIDAYAAMMVLERYF ++GQ TEL++P
Sbjct: 253 ------------------------GLSRSTRQSKIDAYAAMMVLERYFSLAGQETELVLP 235

Query: 355 KSLVLQDKLIEGPPTDPDF 367
           K+L LQ+KL  GPP D DF
Sbjct: 313 KNLDLQEKLKTGPPRDIDF 235

The following BLAST results are available for this feature:

BLAST of MELO3C005958.2 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008437782.1	1.2e-140	73.91	PREDICTED: uncharacterized protein LOC103483114 isoform X1 [Cucumis melo]	[more]
XP_016898999.1	4.3e-119	100.00	PREDICTED: uncharacterized protein LOC103483114 isoform X2 [Cucumis melo]	[more]
XP_004133768.1	2.0e-108	66.77	PREDICTED: uncharacterized protein LOC101219287 isoform X1 [Cucumis sativus] >XP...	[more]
XP_011650631.1	5.4e-90	89.95	PREDICTED: uncharacterized protein LOC101219287 isoform X2 [Cucumis sativus]	[more]
XP_011650632.1	3.5e-89	93.82	PREDICTED: uncharacterized protein LOC101219287 isoform X3 [Cucumis sativus]	[more]

BLAST of MELO3C005958.2 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G12244.1	1.4e-55	40.94	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]

BLAST of MELO3C005958.2 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|A1SJC8\|YQGF_NOCSJ	2.7e-08	39.64	Putative pre-16S rRNA nuclease OS=Nocardioides sp. (strain ATCC BAA-499 / JS614)...	[more]
sp\|B8DIJ5\|YQGF_DESVM	3.3e-06	31.43	Putative pre-16S rRNA nuclease OS=Desulfovibrio vulgaris (strain Miyazaki F / DS...	[more]
sp\|Q3SR28\|YQGF_NITWN	2.2e-05	33.07	Putative pre-16S rRNA nuclease OS=Nitrobacter winogradskyi (strain ATCC 25391 / ...	[more]
sp\|Q1D063\|YQGF_MYXXD	6.3e-05	29.46	Putative pre-16S rRNA nuclease OS=Myxococcus xanthus (strain DK 1622) OX=246197 ...	[more]
sp\|C6C125\|YQGF_DESAD	8.2e-05	31.43	Putative pre-16S rRNA nuclease OS=Desulfovibrio salexigens (strain ATCC 14822 / ...	[more]

BLAST of MELO3C005958.2 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3AUT7\|A0A1S3AUT7_CUCME	7.6e-141	73.91	uncharacterized protein LOC103483114 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
tr\|A0A1S4DSN6\|A0A1S4DSN6_CUCME	2.8e-119	100.00	uncharacterized protein LOC103483114 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
tr\|A0A0A0L3L5\|A0A0A0L3L5_CUCSA	1.3e-108	66.77	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G116900 PE=3 SV=1	[more]
tr\|A0A2P4HP09\|A0A2P4HP09_QUESU	7.6e-64	49.84	Putative pre-16s rrna nuclease OS=Quercus suber OX=58331 GN=CFP56_32757 PE=3 SV=...	[more]
tr\|A0A2P4KL56\|A0A2P4KL56_QUESU	1.3e-63	49.53	Putative pre-16s rrna nuclease OS=Quercus suber OX=58331 GN=CFP56_30511 PE=3 SV=...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0006364	rRNA processing
GO:0006139	nucleobase-containing compound metabolic process

Vocabulary: **INTERPRO**
Term	Definition
IPR012337	RNaseH-like_sf
IPR037027	YqgF/RNaseH-like_dom_sf
IPR005227	YqgF
IPR006641	YqgF/RNaseH-like_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006139	nucleobase-containing compound metabolic process
biological_process	GO:0006364	rRNA processing
biological_process	GO:0006310	DNA recombination
biological_process	GO:0031564	transcription antitermination
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0016787	hydrolase activity
molecular_function	GO:0016740	transferase activity
molecular_function	GO:0003824	catalytic activity
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C005958.2.1	MELO3C005958.2.1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 269..289
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 208..227
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 209..227
None	No IPR available	PANTHER	PTHR33317:SF2	HOLLIDAY JUNCTION RESOLVASE-RELATED	coord: 79..218 coord: 310..349
IPR006641	YqgF/RNase H-like domain	SMART	SM00732	rnase_8s	coord: 108..208 e-value: 3.6E-18 score: 76.4
IPR005227	Putative pre-16S rRNA nuclease	PFAM	PF03652	RuvX	coord: 110..225 e-value: 1.1E-20 score: 74.3
IPR005227	Putative pre-16S rRNA nuclease	TIGRFAM	TIGR00250	TIGR00250	coord: 111..228 e-value: 8.3E-13 score: 46.5
IPR005227	Putative pre-16S rRNA nuclease	PANTHER	PTHR33317	FAMILY NOT NAMED	coord: 310..349
IPR005227	Putative pre-16S rRNA nuclease	PANTHER	PTHR33317	FAMILY NOT NAMED	coord: 79..218
IPR037027	YqgF/RNase H-like domain superfamily	GENE3D	G3DSA:3.30.420.140		coord: 107..232 e-value: 9.9E-22 score: 79.4
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	SSF53098	Ribonuclease H-like	coord: 109..221

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C005958.2	Csa3G116900	Cucumber (Chinese Long) v2	cumedB223
MELO3C005958.2	CSPI03G07240	Wild cucumber (PI 183967)	cpimedB224
MELO3C005958.2	Cucsa.259880	Cucumber (Gy14) v1	cgymedB432
MELO3C005958.2	CmoCh14G022340	Cucurbita moschata (Rifu)	cmomedB258
MELO3C005958.2	Lsi05G022080	Bottle gourd (USVL1VR-Ls)	lsimedB396
MELO3C005958.2	CsGy3G007380	Cucumber (Gy14) v2	cgybmedB201
MELO3C005958.2	Cla021088	Watermelon (97103) v1	medwmB447
MELO3C005958.2	ClCG05G000210	Watermelon (Charleston Gray)	medwcgB416
MELO3C005958.2	Cla97C05G080180	Watermelon (97103) v2	medwmbB423
MELO3C005958.2	Bhi01G000439	Wax gourd	medwgoB542
MELO3C005958.2	Carg17687	Silver-seed gourd	carmedB0141
MELO3C005958.2	CsaV3_3G007360	Cucumber (Chinese Long) v3	cucmedB230

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C005958.2	Cucurbita maxima (Rimu)	cmamedB273
MELO3C005958.2	Cucurbita maxima (Rimu)	cmamedB863
MELO3C005958.2	Cucurbita moschata (Rifu)	cmomedB260
MELO3C005958.2	Cucurbita moschata (Rifu)	cmomedB857
MELO3C005958.2	Cucurbita pepo (Zucchini)	cpemedB693
MELO3C005958.2	Cucurbita pepo (Zucchini)	cpemedB951
MELO3C005958.2	Silver-seed gourd	carmedB0101
MELO3C005958.2	Silver-seed gourd	carmedB0142