Cla97C05G080180 (gene) Watermelon (97103) v2

NameCla97C05G080180
Typegene
OrganismCitrullus lanatus (Watermelon (97103) v2)
DescriptionHolliday junction resolvase-like protein
LocationCla97Chr05 : 339394 .. 342964 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAACGATGTGTGCGCAACGTTTCCAACCCTTTCAGTTTCCGCTGCAGAGCCACAATCTTGTGTCTCCCACCATTTTCTGTCTTCCACCACTCCCTTCCTCCCTATCCCTTCCTCCTCTGCCTCCATCTCCAACCCTAATTTGCAAATGCCACAACCCAATTTCCTCCATTGAACTTCCTCCCAACGCCCTTCGCCGCAAGCTCGACCCTCACTGGAGAGGAGGTTTCAGTCTAGGGGTCGACCTCGGAACCTCTCGCACTGGACTTGCTCTTAGTAAAGGCTTCTCCACTCGTCCTCTTACCGTAATTTTTCTTCATTTTCGCCTCTCTGCGTTTTTCTGTAGCTTGTAATTTCAGCACATTGAACTAATCCACTCTTGTCCTAGATGCTTGCTTTACATTTTTCTGTCTTTCTGCCTACTTTTCTCCTAAATTTAGCGTTATTAACGCAATCATGGTCGATGTCTGGGACATCACTGTTTATAATGTGGCCAACGGCAGACTGCTATTATATTTTCAATTATGTTTTACACAGTCCACCACGCTCTTTTTACTCGGCTGGTTTTATGTTATACATGTATATTGAAATTACAAACGCTTTCCGGCATTAGACTCAATGGTGTGTGTTATCATTCGTTTGGGACTTATGATTTCTGTAGCTGGCTTAGGTTCTGGAGTTGCGAGGACAAAAGCTTGAGGTTAAGCTTATTGAGATTGCTGAACAGGAAGTATATACCTCTCCATCTCTGACGATCTTGCTAATGAAATGCTATCAACATGTTGGAATTATATTTCTTCTCTTTACTTGCACAATAATTCATCCATTGATGGAAAAAAAAACTGTAGGAGGCTGATGAATTTATTATTGGACTTCCTAAATCATGCGATGGAAAAGAGACACCTCAGTCAAATAAAATTCGAAGTATTGCTGGAAGGGTGGCAGCCCGGGCAGCTGAAAGGTGAAATACACCGAATGGTTGCACTTGATTCTCCTATGTCTTCCTCTCTGTTCTGATACTGCTTTTAGTTTAGGGGCTGGAGAGTTTACTTGCATGATGAACATGGGACAACGGCAGAAGCGGACAGCCATATGATTTCCAAGTATTGTTGTCCTCAACACTCACTTATGTTGTCTCTTGTTTAATATTGTTTCCGTGGATTCTATCCTATAAAATTTCATGCATCTCCTCTATTAATATTGTCAGTGTAAACTATATCGCACTTAATGGATTGTCATTCAACATAGTGCCATATTGATTTATCCATTTCCTCTGAGGATTTTGTTGACGTAGATTTTAGGGGTTTGTAGAAATGATAGACTGCCATGTGAAGATTCTTAGACCAATGGCGAACTGAAACTGATGTTAATCTCTATTCTCTACCATTTGGCATTAACTTCATGAATTTATCAAGGTGATGCAGACAGTTGGTTGTTATTTGCTATGGTATTATTGGGATAGGTAGGAATGGAAGAGATGAACACTGGATAAGAAGGTAGAAAAAGCTTATCCCAAATGGAGAAAAAAAAAAGATCTAAGAAGTGCAATGATTTAACATAAGAGATAAAATGAGAACTTTCTCCAAGAATCAAATTAAAATCTTTATTATCAATTAAAAGCGATCAATACTGGCAGGCTAAGTCTGTCTCTTTGTGGGACCCTGTGGTGTTTAAAGTTTGGAATCGGTTAGCCCATTGGAAGAATTCCCCCCCCCCCCAAAAAAAAGCAGGTAGGCTAACCTTGATGAAGACTACCTTGAGTGGTATTCCTATTTATTACTTTTCGCTTTTCAGGGCCCATGTGAGGTGTATAAGTGTATGGAGAGGTTGATGCATGACTTCCTTTGGGAAGGGGTTGATGAAGGTAAAGGCAAAGGTTCACACTTGATTAGATGGGGGATGAGACGGTAAAGGCAAAGGTTCCCACTTGATTAGATGGGAGATGAGAGAATGGTTTCCTTGGGGGGTTTGAAAATTGGGAATCTTAGGATTCGTGACAAAACCCTTTTAGCCAAATGGTTAAGGCGCTTTTCCTCCGAGCCCAATTCTTTGTGGCGTAGGATCACTGAAAGTAAACATGGCCCCCATCATTTTGAACGGTTGTCTAAAGGGATCAAAGGTACCCACCGGAATTTGTGAAAAGATATTTCGAAAGAGCTCCCTTTTTTTGTTCATTTGGTTTGTTGTGTGGTGGGGGAGGGGAGAGATACTTACTTTTGGGAAGATCACTGGTGGGAGCTCTTGTTCCTTTTCATTCGGATTCCATCATTCTTTTTCTGATAGGGAAGCAGGGATGTGGCCGCTCTTCTTTCTTTACTCGAGGGTCACCCTTTTAGGTTGGGGAGAAGGGATGTCAGACTTTTCACCTAGCAAATGTCTCCACTGAATGCTATTGAGATCATCTGTTGATTTTATGCCTGAAAACTCAACACTGGAAGGATCTAAAAGAAACCACATTGTGACTGAGGGAGCAAAGCAAAAGTAAGATTGAATGACGTGAATGATGGAGAACCTAGTCAATTACTAGAAATTTTGATACTCGTGCAAACTTCTATATGAAACTGATGGAGAATTGACTTGTTTCTTGTGAGGGTTGTTGCATGGATAGTGACACATTTTTGTCGCCTGTGGTTATTGATGTTATCAGTTTCTGTTATTGATGTTATCAGTTTCTGTTTTGCTTTATTGTATTTAATGGAAGAGTACAATGGTACAGTTTATATTTAAAATGGGCCTTGCGGCTGTTTTTAGATTTTCATCATGCAAACAAGATACTTTGTTGACATAAGAAAAGAAAAAAATTTGTTATCCCACTAGTATAGAAAAGACTTCTTTTTTTTTTTTTTTTTTCTTTTTGTTTTCTAATTGTTTTTTAGATATTTCTCTTGCGGTTCTCTCAGTTTAAATTGTATGACTCTGAGACCCTGTCCGTTCATTAGCTATGGTTAGACTGTATGTTGCATCGACTGGAAGAACTCTATGTAATCTTTTAGGCTCGGGGTTGGCTTTCCTCCCCCTCCTTTCCTCCACTCCTTTTGTAGTTCCAATTAATCTATGAAATTGGTTGGTTTGTTACTGAAAAATAGATAATGATATCCTCTTTATATCAGTAGATCTATACTTCTCTATTTGGGTTGGTCACGTAATGACGTATAGTAATGTAACAAGATTTGAATATGGAAAATTGACATTTTGATGTTTTGTTCAGGGGGCTCAATAAATCTACTCGGCAGAAGAAGATTGATGCCTATGCTGCCATGGTAAAGTTGTGAATATTTTCATATTATGAGCACTGGATTATATGAAATGCAGCAATCCATGTGCAGGCTTCCTTTTTTTTTTTTTTAATAATTTTTTCACTTTACTTCTCTTTATTTGATGCAGATGGTACTAGAGAGATATTTTTTCTAATAATTTTTTCACATTACTTCTCTTTATTTGATGCAGATGGTACTAGAGAGATATTTTTTCATGTCAGGCGAGGGAACCGAGCTTGTAGTGCCTAAGAGTCTAGTCTTACAAGATAAGCTTATTGAGGGACCACCTACAGACCCAGACTTTAAGGATTGA

mRNA sequence

ATGGAAACGATGTGTGCGCAACGTTTCCAACCCTTTCAGTTTCCGCTGCAGAGCCACAATCTTGTGTCTCCCACCATTTTCTGTCTTCCACCACTCCCTTCCTCCCTATCCCTTCCTCCTCTGCCTCCATCTCCAACCCTAATTTGCAAATGCCACAACCCAATTTCCTCCATTGAACTTCCTCCCAACGCCCTTCGCCGCAAGCTCGACCCTCACTGGAGAGGAGGTTTCAGTCTAGGGGTCGACCTCGGAACCTCTCGCACTGGACTTGCTCTTAGTAAAGGCTTCTCCACTCGTCCTCTTACCGTTCTGGAGTTGCGAGGACAAAAGCTTGAGGTTAAGCTTATTGAGATTGCTGAACAGGAAGAGGCTGATGAATTTATTATTGGACTTCCTAAATCATGCGATGGAAAAGAGACACCTCAGTCAAATAAAATTCGAAGTATTGCTGGAAGGGTGGCAGCCCGGGCAGCTGAAAGGGGCTGGAGAGTTTACTTGCATGATGAACATGGGACAACGGCAGAAGCGGACAGCCATATGATTTCCAAGGGGCTCAATAAATCTACTCGGCAGAAGAAGATTGATGCCTATGCTGCCATGATGGTACTAGAGAGATATTTTTTCATGTCAGGCGAGGGAACCGAGCTTGTAGTGCCTAAGAGTCTAGTCTTACAAGATAAGCTTATTGAGGGACCACCTACAGACCCAGACTTTAAGGATTGA

Coding sequence (CDS)

ATGGAAACGATGTGTGCGCAACGTTTCCAACCCTTTCAGTTTCCGCTGCAGAGCCACAATCTTGTGTCTCCCACCATTTTCTGTCTTCCACCACTCCCTTCCTCCCTATCCCTTCCTCCTCTGCCTCCATCTCCAACCCTAATTTGCAAATGCCACAACCCAATTTCCTCCATTGAACTTCCTCCCAACGCCCTTCGCCGCAAGCTCGACCCTCACTGGAGAGGAGGTTTCAGTCTAGGGGTCGACCTCGGAACCTCTCGCACTGGACTTGCTCTTAGTAAAGGCTTCTCCACTCGTCCTCTTACCGTTCTGGAGTTGCGAGGACAAAAGCTTGAGGTTAAGCTTATTGAGATTGCTGAACAGGAAGAGGCTGATGAATTTATTATTGGACTTCCTAAATCATGCGATGGAAAAGAGACACCTCAGTCAAATAAAATTCGAAGTATTGCTGGAAGGGTGGCAGCCCGGGCAGCTGAAAGGGGCTGGAGAGTTTACTTGCATGATGAACATGGGACAACGGCAGAAGCGGACAGCCATATGATTTCCAAGGGGCTCAATAAATCTACTCGGCAGAAGAAGATTGATGCCTATGCTGCCATGATGGTACTAGAGAGATATTTTTTCATGTCAGGCGAGGGAACCGAGCTTGTAGTGCCTAAGAGTCTAGTCTTACAAGATAAGCTTATTGAGGGACCACCTACAGACCCAGACTTTAAGGATTGA

Protein sequence

METMCAQRFQPFQFPLQSHNLVSPTIFCLPPLPSSLSLPPLPPSPTLICKCHNPISSIELPPNALRRKLDPHWRGGFSLGVDLGTSRTGLALSKGFSTRPLTVLELRGQKLEVKLIEIAEQEEADEFIIGLPKSCDGKETPQSNKIRSIAGRVAARAAERGWRVYLHDEHGTTAEADSHMISKGLNKSTRQKKIDAYAAMMVLERYFFMSGEGTELVVPKSLVLQDKLIEGPPTDPDFKD
BLAST of Cla97C05G080180 vs. NCBI nr
Match: XP_022979278.1 (uncharacterized protein LOC111479048 [Cucurbita maxima])

HSP 1 Score: 380.2 bits (975), Expect = 5.3e-102
Identity = 198/237 (83.54%), Postives = 204/237 (86.08%), Query Frame = 0

Query: 4   MCAQRFQPFQFPLQSHNLVSPTIFCLPPLPSXXXXXXXXXXXTLICKCHNPISSIELPPN 63
           MCA  FQP  FPLQSH L S  IFC PP PS            LICKC   ISS+ELPPN
Sbjct: 1   MCALHFQP--FPLQSHKLHSSAIFC-PPRPS--SLPLLPPSPNLICKCRTAISSVELPPN 60

Query: 64  ALRRKLDPHWRGGFSLGVDLGTSRTGLALSKGFSTRPLTVLELRGQKLEVKLIEIAEQEE 123
           ALRRKLDP WRGGFSLGVDLGTSRTGLALSKGFSTRPLTVLELRGQKLE KLIEIAEQEE
Sbjct: 61  ALRRKLDPQWRGGFSLGVDLGTSRTGLALSKGFSTRPLTVLELRGQKLEFKLIEIAEQEE 120

Query: 124 ADEFIIGLPKSCDGKETPQSNKIRSIAGRVAARAAERGWRVYLHDEHGTTAEADSHMISK 183
           ADEFIIGLPKS DGKETPQSNKIRSIAGRVAA+AAERGWRVYLHDEHGTTAEA+SHMI +
Sbjct: 121 ADEFIIGLPKSLDGKETPQSNKIRSIAGRVAAQAAERGWRVYLHDEHGTTAEAESHMICR 180

Query: 184 GLNKSTRQKKIDAYAAMMVLERYFFMSGEGTELVVPKSLVLQDKLIEGPPTDPDFKD 241
           GLNK+TRQKKIDAYAAMMVLERYF MSGEGTELVVPK  VLQ+KLIEGPP DPDFKD
Sbjct: 181 GLNKTTRQKKIDAYAAMMVLERYFSMSGEGTELVVPKGQVLQEKLIEGPPIDPDFKD 232

BLAST of Cla97C05G080180 vs. NCBI nr
Match: XP_008437782.1 (PREDICTED: uncharacterized protein LOC103483114 isoform X1 [Cucumis melo])

HSP 1 Score: 378.6 bits (971), Expect = 1.5e-101
Identity = 200/241 (82.99%), Postives = 208/241 (86.31%), Query Frame = 0

Query: 4   MCAQ--RFQPFQFPLQSHNLVSPTIFCLPPLPSXXXXXXXXXXXTLICKCH--NPISSIE 63
           +C Q  +FQ FQFPLQSH L+      LPP PS            L  K H  NP SSIE
Sbjct: 42  LCGQCFQFQAFQFPLQSHRLLHSLHPHLPP-PS---------PPALFSKSHNNNPFSSIE 101

Query: 64  LPPNALRRKLDPHWRGGFSLGVDLGTSRTGLALSKGFSTRPLTVLELRGQKLEVKLIEIA 123
           LPPNALRRKLDPHWRGGFSLGVDLGTSRTGLALSKGFS RPLTVLELRGQKLE KLI+IA
Sbjct: 102 LPPNALRRKLDPHWRGGFSLGVDLGTSRTGLALSKGFSIRPLTVLELRGQKLEAKLIQIA 161

Query: 124 EQEEADEFIIGLPKSCDGKETPQSNKIRSIAGRVAARAAERGWRVYLHDEHGTTAEADSH 183
           EQEEADEFIIGLPKSCDGKETPQSNKIRSIAGRVAARAAERGWRVYL+DEHGTTAEA+SH
Sbjct: 162 EQEEADEFIIGLPKSCDGKETPQSNKIRSIAGRVAARAAERGWRVYLYDEHGTTAEAESH 221

Query: 184 MISKGLNKSTRQKKIDAYAAMMVLERYFFMSGEGTELVVPKSLVLQDKLIEGPPTDPDFK 241
           MISKGLNKSTRQKKIDAYAAMMVLERYF MSG+GTEL+VPKSLVLQDKLIEGPPTDPDFK
Sbjct: 222 MISKGLNKSTRQKKIDAYAAMMVLERYFLMSGQGTELLVPKSLVLQDKLIEGPPTDPDFK 272

BLAST of Cla97C05G080180 vs. NCBI nr
Match: XP_004133768.1 (PREDICTED: uncharacterized protein LOC101219287 isoform X1 [Cucumis sativus] >XP_011650630.1 PREDICTED: uncharacterized protein LOC101219287 isoform X1 [Cucumis sativus] >KGN56353.1 hypothetical protein Csa_3G116900 [Cucumis sativus])

HSP 1 Score: 377.9 bits (969), Expect = 2.6e-101
Identity = 197/235 (83.83%), Postives = 206/235 (87.66%), Query Frame = 0

Query: 8   RFQPFQFPLQSHNLVSPTIFCLPPLPSXXXXXXXXXXXTLICKCH--NPISSIELPPNAL 67
           +FQ FQFPLQ+H L+      LPP  S            LI K H  NPISSIELPPNAL
Sbjct: 11  QFQAFQFPLQTHKLLHSLHPHLPPPSS----------PALISKSHNNNPISSIELPPNAL 70

Query: 68  RRKLDPHWRGGFSLGVDLGTSRTGLALSKGFSTRPLTVLELRGQKLEVKLIEIAEQEEAD 127
           RRKLDPHWRGGFSLGVDLGTSRTGLALSKGFSTRPLTVLELRGQKLE KLIEIAEQEEAD
Sbjct: 71  RRKLDPHWRGGFSLGVDLGTSRTGLALSKGFSTRPLTVLELRGQKLEAKLIEIAEQEEAD 130

Query: 128 EFIIGLPKSCDGKETPQSNKIRSIAGRVAARAAERGWRVYLHDEHGTTAEADSHMISKGL 187
           EFIIGLPKSCDGKETPQSNKIRSIAGRVAARAAERGWRVYL+DEHGTTAEA+SHMIS+GL
Sbjct: 131 EFIIGLPKSCDGKETPQSNKIRSIAGRVAARAAERGWRVYLYDEHGTTAEAESHMISRGL 190

Query: 188 NKSTRQKKIDAYAAMMVLERYFFMSGEGTELVVPKSLVLQDKLIEGPPTDPDFKD 241
           NKSTRQKKIDAYAAMMVLERYF  SG+GTEL+VPKSLVLQDKLIEGPPTDPDF+D
Sbjct: 191 NKSTRQKKIDAYAAMMVLERYFSTSGQGTELLVPKSLVLQDKLIEGPPTDPDFRD 235

BLAST of Cla97C05G080180 vs. NCBI nr
Match: XP_023528266.1 (uncharacterized protein LOC111791236 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 377.1 bits (967), Expect = 4.5e-101
Identity = 197/237 (83.12%), Postives = 203/237 (85.65%), Query Frame = 0

Query: 4   MCAQRFQPFQFPLQSHNLVSPTIFCLPPLPSXXXXXXXXXXXTLICKCHNPISSIELPPN 63
           MCA  FQP  FP QSH L S  IFC PP PS            LICKC   ISS+ELPPN
Sbjct: 1   MCALHFQP--FPPQSHKLHSSAIFC-PPRPS--SLPLLPPSPNLICKCKTAISSVELPPN 60

Query: 64  ALRRKLDPHWRGGFSLGVDLGTSRTGLALSKGFSTRPLTVLELRGQKLEVKLIEIAEQEE 123
           ALRRKLDP WRGGFSLGVDLGTSRTGLALSKGFSTRPLTVLELRGQKLE KLIEIAEQEE
Sbjct: 61  ALRRKLDPQWRGGFSLGVDLGTSRTGLALSKGFSTRPLTVLELRGQKLEFKLIEIAEQEE 120

Query: 124 ADEFIIGLPKSCDGKETPQSNKIRSIAGRVAARAAERGWRVYLHDEHGTTAEADSHMISK 183
           ADEFIIGLPKS DGKETPQSNKIRSIAGRVAA+AAERGWRVYLHDEHGTTAEA+SHMI +
Sbjct: 121 ADEFIIGLPKSLDGKETPQSNKIRSIAGRVAAQAAERGWRVYLHDEHGTTAEAESHMICR 180

Query: 184 GLNKSTRQKKIDAYAAMMVLERYFFMSGEGTELVVPKSLVLQDKLIEGPPTDPDFKD 241
           GLNK+TRQKKIDAYAAMMVLERYF MSGEGTELVVPK  VLQ+KLIEGPP DPDFKD
Sbjct: 181 GLNKTTRQKKIDAYAAMMVLERYFSMSGEGTELVVPKGQVLQEKLIEGPPIDPDFKD 232

BLAST of Cla97C05G080180 vs. NCBI nr
Match: XP_022924794.1 (uncharacterized protein LOC111432185 [Cucurbita moschata])

HSP 1 Score: 374.4 bits (960), Expect = 2.9e-100
Identity = 196/237 (82.70%), Postives = 202/237 (85.23%), Query Frame = 0

Query: 4   MCAQRFQPFQFPLQSHNLVSPTIFCLPPLPSXXXXXXXXXXXTLICKCHNPISSIELPPN 63
           MCA  FQP  FPLQS  L S  IFC PP PS            LICKC   ISS+ELPPN
Sbjct: 1   MCALHFQP--FPLQSDKLHSSAIFC-PPRPS--SLPLLPPSPNLICKCKTAISSVELPPN 60

Query: 64  ALRRKLDPHWRGGFSLGVDLGTSRTGLALSKGFSTRPLTVLELRGQKLEVKLIEIAEQEE 123
           ALRRKLDP WRGGFSLGVDLGTSRTGLALSKGFSTRPLTVLELRGQKLE KLIEIAEQEE
Sbjct: 61  ALRRKLDPQWRGGFSLGVDLGTSRTGLALSKGFSTRPLTVLELRGQKLEFKLIEIAEQEE 120

Query: 124 ADEFIIGLPKSCDGKETPQSNKIRSIAGRVAARAAERGWRVYLHDEHGTTAEADSHMISK 183
           ADEFIIGLPKS DGKETPQSNKIRSIAGRVAA+AAERGWRVYLHDEHGTTAEA+SHMI +
Sbjct: 121 ADEFIIGLPKSLDGKETPQSNKIRSIAGRVAAQAAERGWRVYLHDEHGTTAEAESHMICR 180

Query: 184 GLNKSTRQKKIDAYAAMMVLERYFFMSGEGTELVVPKSLVLQDKLIEGPPTDPDFKD 241
           GLNK+ RQKKIDAYAAMMVLERYF MSGEGTELVVPK  VLQ+KLIEGPP DPDFKD
Sbjct: 181 GLNKTARQKKIDAYAAMMVLERYFSMSGEGTELVVPKGQVLQEKLIEGPPIDPDFKD 232

BLAST of Cla97C05G080180 vs. TrEMBL
Match: tr|A0A1S3AUT7|A0A1S3AUT7_CUCME (uncharacterized protein LOC103483114 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103483114 PE=3 SV=1)

HSP 1 Score: 378.6 bits (971), Expect = 1.0e-101
Identity = 200/241 (82.99%), Postives = 208/241 (86.31%), Query Frame = 0

Query: 4   MCAQ--RFQPFQFPLQSHNLVSPTIFCLPPLPSXXXXXXXXXXXTLICKCH--NPISSIE 63
           +C Q  +FQ FQFPLQSH L+      LPP PS            L  K H  NP SSIE
Sbjct: 42  LCGQCFQFQAFQFPLQSHRLLHSLHPHLPP-PS---------PPALFSKSHNNNPFSSIE 101

Query: 64  LPPNALRRKLDPHWRGGFSLGVDLGTSRTGLALSKGFSTRPLTVLELRGQKLEVKLIEIA 123
           LPPNALRRKLDPHWRGGFSLGVDLGTSRTGLALSKGFS RPLTVLELRGQKLE KLI+IA
Sbjct: 102 LPPNALRRKLDPHWRGGFSLGVDLGTSRTGLALSKGFSIRPLTVLELRGQKLEAKLIQIA 161

Query: 124 EQEEADEFIIGLPKSCDGKETPQSNKIRSIAGRVAARAAERGWRVYLHDEHGTTAEADSH 183
           EQEEADEFIIGLPKSCDGKETPQSNKIRSIAGRVAARAAERGWRVYL+DEHGTTAEA+SH
Sbjct: 162 EQEEADEFIIGLPKSCDGKETPQSNKIRSIAGRVAARAAERGWRVYLYDEHGTTAEAESH 221

Query: 184 MISKGLNKSTRQKKIDAYAAMMVLERYFFMSGEGTELVVPKSLVLQDKLIEGPPTDPDFK 241
           MISKGLNKSTRQKKIDAYAAMMVLERYF MSG+GTEL+VPKSLVLQDKLIEGPPTDPDFK
Sbjct: 222 MISKGLNKSTRQKKIDAYAAMMVLERYFLMSGQGTELLVPKSLVLQDKLIEGPPTDPDFK 272

BLAST of Cla97C05G080180 vs. TrEMBL
Match: tr|A0A0A0L3L5|A0A0A0L3L5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G116900 PE=3 SV=1)

HSP 1 Score: 377.9 bits (969), Expect = 1.7e-101
Identity = 197/235 (83.83%), Postives = 206/235 (87.66%), Query Frame = 0

Query: 8   RFQPFQFPLQSHNLVSPTIFCLPPLPSXXXXXXXXXXXTLICKCH--NPISSIELPPNAL 67
           +FQ FQFPLQ+H L+      LPP  S            LI K H  NPISSIELPPNAL
Sbjct: 11  QFQAFQFPLQTHKLLHSLHPHLPPPSS----------PALISKSHNNNPISSIELPPNAL 70

Query: 68  RRKLDPHWRGGFSLGVDLGTSRTGLALSKGFSTRPLTVLELRGQKLEVKLIEIAEQEEAD 127
           RRKLDPHWRGGFSLGVDLGTSRTGLALSKGFSTRPLTVLELRGQKLE KLIEIAEQEEAD
Sbjct: 71  RRKLDPHWRGGFSLGVDLGTSRTGLALSKGFSTRPLTVLELRGQKLEAKLIEIAEQEEAD 130

Query: 128 EFIIGLPKSCDGKETPQSNKIRSIAGRVAARAAERGWRVYLHDEHGTTAEADSHMISKGL 187
           EFIIGLPKSCDGKETPQSNKIRSIAGRVAARAAERGWRVYL+DEHGTTAEA+SHMIS+GL
Sbjct: 131 EFIIGLPKSCDGKETPQSNKIRSIAGRVAARAAERGWRVYLYDEHGTTAEAESHMISRGL 190

Query: 188 NKSTRQKKIDAYAAMMVLERYFFMSGEGTELVVPKSLVLQDKLIEGPPTDPDFKD 241
           NKSTRQKKIDAYAAMMVLERYF  SG+GTEL+VPKSLVLQDKLIEGPPTDPDF+D
Sbjct: 191 NKSTRQKKIDAYAAMMVLERYFSTSGQGTELLVPKSLVLQDKLIEGPPTDPDFRD 235

BLAST of Cla97C05G080180 vs. TrEMBL
Match: tr|A0A2P4HP09|A0A2P4HP09_QUESU (Putative pre-16s rrna nuclease OS=Quercus suber OX=58331 GN=CFP56_32757 PE=3 SV=1)

HSP 1 Score: 290.0 bits (741), Expect = 4.7e-75
Identity = 152/224 (67.86%), Postives = 172/224 (76.79%), Query Frame = 0

Query: 15  PLQSHNLVSPTIFCLPPLPSXXXXXXXXXXXTLICKCHNPISSIELPPNALRRKLDPHWR 74
           PLQ H  +SP +    PL +                    IS  +LPPNAL RK DP+WR
Sbjct: 13  PLQPH-FLSPNLTIHKPLNTPASLPLSSTKTRKYTPTLRAISLQQLPPNALHRKRDPNWR 72

Query: 75  GGFSLGVDLGTSRTGLALSKGFSTRPLTVLELRGQKLEVKLIEIAEQEEADEFIIGLPKS 134
           GGFSLGVDLG SRTGLALSKGFS RPLTVLELRGQKLE++L++IA+QEEADEFIIGLPKS
Sbjct: 73  GGFSLGVDLGMSRTGLALSKGFSIRPLTVLELRGQKLELQLLQIAQQEEADEFIIGLPKS 132

Query: 135 CDGKETPQSNKIRSIAGRVAARAAERGWRVYLHDEHGTTAEADSHMISKGLNKSTRQKKI 194
            DGKETPQSNK+RS+AGR AARAAERGWRVYL DEHGTT EA   MI  GL++STRQ KI
Sbjct: 133 SDGKETPQSNKVRSVAGRFAARAAERGWRVYLQDEHGTTTEATDRMICMGLSRSTRQSKI 192

Query: 195 DAYAAMMVLERYFFMSGEGTELVVPKSLVLQDKLIEGPPTDPDF 239
           DAYAAMMVLERYF ++G+ TELV+PK+L LQ+KL  GPP D DF
Sbjct: 193 DAYAAMMVLERYFSLAGQETELVLPKNLDLQEKLKTGPPRDIDF 235

BLAST of Cla97C05G080180 vs. TrEMBL
Match: tr|A0A2I4EL85|A0A2I4EL85_9ROSI (uncharacterized protein LOC108990603 OS=Juglans regia OX=51240 GN=LOC108990603 PE=3 SV=1)

HSP 1 Score: 289.3 bits (739), Expect = 8.1e-75
Identity = 155/241 (64.32%), Postives = 179/241 (74.27%), Query Frame = 0

Query: 7   QRFQPFQFP---LQSHNLVSPTIFCLPPLPSXXXXXXXXXXXTLICKCHNPISSI----- 66
           Q+ QPF+     L S   ++PT   LP L +               K HN    I     
Sbjct: 4   QQLQPFRAQSNFLCSPQFLAPTALSLPKLTNAPASLSLSP-----VKTHNSARRISAASL 63

Query: 67  -ELPPNALRRKLDPHWRGGFSLGVDLGTSRTGLALSKGFSTRPLTVLELRGQKLEVKLIE 126
            ELPPNALRRK+DP WRGGFSLGVDLG SRTG+ALSKGFS RPLTVLELRGQKLE++L++
Sbjct: 64  DELPPNALRRKIDPKWRGGFSLGVDLGMSRTGVALSKGFSVRPLTVLELRGQKLELELLD 123

Query: 127 IAEQEEADEFIIGLPKSCDGKETPQSNKIRSIAGRVAARAAERGWRVYLHDEHGTTAEAD 186
           IA QEE DEFIIGLPKSC+G ETPQSN +RS+AGR+A RAAERGWRVYL DEHGTT+EA 
Sbjct: 124 IALQEEVDEFIIGLPKSCNGIETPQSNIVRSVAGRLAVRAAERGWRVYLQDEHGTTSEAA 183

Query: 187 SHMISKGLNKSTRQKKIDAYAAMMVLERYFFMSGEGTELVVPKSLVLQDKLIEGPPTDPD 239
             MIS G+N+STRQ KIDAYAAMM+LERYF ++G GTELV+PK+L LQ+KL  GPP D D
Sbjct: 184 DRMISMGINRSTRQGKIDAYAAMMLLERYFSLAGHGTELVLPKNLDLQEKLRRGPPKDID 239

BLAST of Cla97C05G080180 vs. TrEMBL
Match: tr|A0A1U8Q450|A0A1U8Q450_NELNU (uncharacterized protein LOC104599161 OS=Nelumbo nucifera OX=4432 GN=LOC104599161 PE=3 SV=1)

HSP 1 Score: 288.1 bits (736), Expect = 1.8e-74
Identity = 145/197 (73.60%), Postives = 165/197 (83.76%), Query Frame = 0

Query: 47  LICKCHNP-----ISSIELPPNALRRKLDPHWRGGFSLGVDLGTSRTGLALSKGFSTRPL 106
           L+ K H P     +S  E+PPNA RRK+DPHWRGGFS+GVDLG SRTG+A+SKGFS RPL
Sbjct: 46  LMNKVHIPSKIRAVSIDEIPPNAFRRKIDPHWRGGFSVGVDLGLSRTGVAVSKGFSARPL 105

Query: 107 TVLELRGQKLEVKLIEIAEQEEADEFIIGLPKSCDGKETPQSNKIRSIAGRVAARAAERG 166
           TVLELRGQKLE +L+EIAE+EEADEFIIGLPKS  GKETPQSNK+RS+AGR+A RAAERG
Sbjct: 106 TVLELRGQKLESRLLEIAEREEADEFIIGLPKSRHGKETPQSNKVRSVAGRLAVRAAERG 165

Query: 167 WRVYLHDEHGTTAEADSHMISKGLNKSTRQKKIDAYAAMMVLERYFFMSGEGTELVVPKS 226
           WRVYL DEHGT+ EA   MI  G+NKSTRQ +IDA+AAMMVLERYF MSG GTELV+PK 
Sbjct: 166 WRVYLQDEHGTSMEALDFMIDTGINKSTRQGRIDAFAAMMVLERYFSMSGHGTELVLPKQ 225

Query: 227 LVLQDKLIEGPPTDPDF 239
           L LQ+KL +GPP D DF
Sbjct: 226 LDLQEKLRKGPPKDEDF 242

BLAST of Cla97C05G080180 vs. Swiss-Prot
Match: sp|A1SJC8|YQGF_NOCSJ (Putative pre-16S rRNA nuclease OS=Nocardioides sp. (strain ATCC BAA-499 / JS614) OX=196162 GN=Noca_2408 PE=3 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 1.7e-11
Identity = 49/137 (35.77%), Postives = 75/137 (54.74%), Query Frame = 0

Query: 74  RGGFSLGVDLGTSRTGLALS--KGFSTRPL-TVLELRGQKLEVKLIEIAEQEEAD---EF 133
           R G  +G+D G +R G+A S   GF   P+ TV   +G    +  I  AE++E     E 
Sbjct: 2   RAGVRIGIDPGDARIGVARSDPSGFLATPVETVRRGKGDLARIGRILAAEEDEGATVLEV 61

Query: 134 IIGLPKSCDGKETPQSNKIRSIAGRVAARAAERGWRVYLHDEHGTTAEADSHMISKGLNK 193
           ++GLP+S  G+E P + K+R  AGR+AAR A     V L DE  TT  A++ +  +G   
Sbjct: 62  VVGLPRSLSGREGPAAAKVREFAGRLAARVAP--VPVRLVDERMTTVSAEAMLRDQGRTG 121

Query: 194 STRQKKIDAYAAMMVLE 205
             R+  +D  AA+++L+
Sbjct: 122 GKRRAVVDQAAAVLILQ 136

BLAST of Cla97C05G080180 vs. Swiss-Prot
Match: sp|A5D3C3|YQGF_PELTS (Putative pre-16S rRNA nuclease OS=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) OX=370438 GN=PTH_1065 PE=3 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 2.1e-09
Identity = 40/137 (29.20%), Postives = 77/137 (56.20%), Query Frame = 0

Query: 79  LGVDLGTSRTGLALS--KGFSTRPLTVLELRG--QKLEVKLIEIAEQEEADEFIIGLPKS 138
           +G+DLG  + G+ALS   G++ + L V+ ++G  +    ++ E+  Q    + ++GLP++
Sbjct: 4   MGLDLGDKKIGVALSDPMGWTAQGLDVIAVKGPPEASVERISELVRQYGVGKIVVGLPRN 63

Query: 139 CDGKETPQSNKIRSIAGRVAARAAERGWRVYLHDEHGTTAEADSHMISKGLNKSTRQKKI 198
            +G   P++ + R+ AG +A         V L DE  TT EA+  +I   L+++ R++ I
Sbjct: 64  MNGSFGPRAERARAFAGCLAGAL---NLPVELWDERMTTLEAEKLLIEADLSRARRRQVI 123

Query: 199 DAYAAMMVLERYFFMSG 212
           D  AA+++L+ +    G
Sbjct: 124 DKMAAVLILQSFLDSQG 137

BLAST of Cla97C05G080180 vs. Swiss-Prot
Match: sp|Q3SR28|YQGF_NITWN (Putative pre-16S rRNA nuclease OS=Nitrobacter winogradskyi (strain ATCC 25391 / DSM 10237 / CIP 104748 / NCIMB 11846 / Nb-255) OX=323098 GN=Nwi_2004 PE=3 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 6.1e-09
Identity = 44/137 (32.12%), Postives = 74/137 (54.01%), Query Frame = 0

Query: 72  HWRG-GFSLGVDLGTSRTGLALS---KGFSTRPLTVLELRGQKLEVKLIEIAEQEEADEF 131
           HW   G  +G+DLGT   G+A+S   +  +T   T+          +L+ IA +  A+ F
Sbjct: 14  HWPARGALVGLDLGTKTIGVAVSDPDRRLATGVETIRRKTFTADAARLLAIAGERRAEGF 73

Query: 132 IIGLPKSCDGKETPQSNKIRSIAGRVAARAAERGWRVYLHDEHGTTAEADSHMISKGLNK 191
           I+GLP + DG E P++   R+ A R  AR  +  + + L DE  +TA  +  +I   +++
Sbjct: 74  ILGLPINMDGSEGPRAQSTRAFA-RNLARLTD--FAIGLWDERLSTAAVERELIGLDMSR 133

Query: 192 STRQKKIDAYAAMMVLE 205
           + R K ID +AA+ +L+
Sbjct: 134 ARRAKVIDEHAAIFILQ 147

BLAST of Cla97C05G080180 vs. Swiss-Prot
Match: sp|Q2G9X2|YQGF_NOVAD (Putative pre-16S rRNA nuclease OS=Novosphingobium aromaticivorans (strain ATCC 700278 / DSM 12444 / CIP 105152 / NBRC 16084 / F199) OX=279238 GN=Saro_0906 PE=3 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 1.0e-08
Identity = 39/133 (29.32%), Postives = 70/133 (52.63%), Query Frame = 0

Query: 75  GGFSLGVDLGTSRTGLALSK---GFSTRPLTVLELRGQKLEVKLIEIAEQEEADEFIIGL 134
           GG  +G+D GT   G+AL      F+T   T+   +    + ++  I  +      +IGL
Sbjct: 16  GGSLIGLDTGTKTIGVALCDREWRFATAGTTIRRTKFAADKAQIRAIVAERGVKGIVIGL 75

Query: 135 PKSCDGKETPQSNKIRSIAGRVAARAAERGWRVYLHDEHGTTAEADSHMISKGLNKSTRQ 194
           P + DG E+P+S   R++A  +     + G  + L DE  TT  A+  MI +  +++ R 
Sbjct: 76  PLNMDGSESPRSQGARAMARNL----EDLGLPILLWDERWTTQAAERAMIEQDFSRAKRA 135

Query: 195 KKIDAYAAMMVLE 205
           ++ID++AA ++L+
Sbjct: 136 ERIDSHAAALILQ 144

BLAST of Cla97C05G080180 vs. Swiss-Prot
Match: sp|C6C125|YQGF_DESAD (Putative pre-16S rRNA nuclease OS=Desulfovibrio salexigens (strain ATCC 14822 / DSM 2638 / NCIB 8403 / VKM B-1763) OX=526222 GN=Desal_1125 PE=3 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 1.8e-08
Identity = 41/131 (31.30%), Postives = 69/131 (52.67%), Query Frame = 0

Query: 79  LGVDLGTSRTGLALS--KGFSTRPLTVLE-LRGQKLEVKLIEIAEQEEADEFIIGLPKSC 138
           L +D GT R GLA+S        P  V+E      +  +L+EI E E+  + +IGLP S 
Sbjct: 4   LSIDFGTKRVGLAISDPDQIFAFPYKVMERTTRDAMFSELLEIIENEKVGDIVIGLPLSL 63

Query: 139 DGKETPQSNKIRSIAGRVAARAAERGWRVYLHDEHGTTAEADSHMISKGLNKSTRQKKID 198
           DG++T  + ++R+ A  +  R       ++L DE  ++  A+  +   GL    R+K +D
Sbjct: 64  DGEDTLTTRQVRNFAASLERRV---DLPIHLVDERLSSIAAEDELKEAGLWDRKRKKNLD 123

Query: 199 AYAAMMVLERY 207
           + AA ++LE +
Sbjct: 124 SQAAKIILETW 131

BLAST of Cla97C05G080180 vs. TAIR10
Match: AT1G12244.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein)

HSP 1 Score: 258.5 bits (659), Expect = 4.2e-69
Identity = 124/180 (68.89%), Postives = 152/180 (84.44%), Query Frame = 0

Query: 59  ELPPNALRRKLDPHWRGGFSLGVDLGTSRTGLALSKGFSTRPLTVLELRGQKLEVKLIEI 118
           E+PPNA+RRK+D +WRGGFSLGVDLG SRTG+A+SKG++ +PLTVL+ RGQKLE +L+EI
Sbjct: 64  EIPPNAVRRKIDRNWRGGFSLGVDLGLSRTGIAISKGYTVKPLTVLKSRGQKLETRLLEI 123

Query: 119 AEQEEADEFIIGLPKSCDGKETPQSNKIRSIAGRVAARAAERGWRVYLHDEHGTTAEADS 178
           AE+EEADEFIIGLP+S DGKET QSNKIRS+AGR+A +AAERGWRVY+ DEHGTT+EA  
Sbjct: 124 AEEEEADEFIIGLPRSSDGKETIQSNKIRSVAGRLAIQAAERGWRVYVFDEHGTTSEASD 183

Query: 179 HMISKGLNKSTRQKKIDAYAAMMVLERYFFMSGEGTELVVPKSLVLQDKLIEGPPTDPDF 238
            MI  GL+KS RQ + DAYAA+++LERYF   G G E+++PKSL LQ K+  G P DPDF
Sbjct: 184 RMIVMGLSKSERQNRSDAYAAVILLERYFSTQGLGIEIILPKSLELQAKIKNGAPVDPDF 243

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022979278.15.3e-10283.54uncharacterized protein LOC111479048 [Cucurbita maxima][more]
XP_008437782.11.5e-10182.99PREDICTED: uncharacterized protein LOC103483114 isoform X1 [Cucumis melo][more]
XP_004133768.12.6e-10183.83PREDICTED: uncharacterized protein LOC101219287 isoform X1 [Cucumis sativus] >XP... [more]
XP_023528266.14.5e-10183.12uncharacterized protein LOC111791236 [Cucurbita pepo subsp. pepo][more]
XP_022924794.12.9e-10082.70uncharacterized protein LOC111432185 [Cucurbita moschata][more]
Match NameE-valueIdentityDescription
tr|A0A1S3AUT7|A0A1S3AUT7_CUCME1.0e-10182.99uncharacterized protein LOC103483114 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10... [more]
tr|A0A0A0L3L5|A0A0A0L3L5_CUCSA1.7e-10183.83Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G116900 PE=3 SV=1[more]
tr|A0A2P4HP09|A0A2P4HP09_QUESU4.7e-7567.86Putative pre-16s rrna nuclease OS=Quercus suber OX=58331 GN=CFP56_32757 PE=3 SV=... [more]
tr|A0A2I4EL85|A0A2I4EL85_9ROSI8.1e-7564.32uncharacterized protein LOC108990603 OS=Juglans regia OX=51240 GN=LOC108990603 P... [more]
tr|A0A1U8Q450|A0A1U8Q450_NELNU1.8e-7473.60uncharacterized protein LOC104599161 OS=Nelumbo nucifera OX=4432 GN=LOC104599161... [more]
Match NameE-valueIdentityDescription
sp|A1SJC8|YQGF_NOCSJ1.7e-1135.77Putative pre-16S rRNA nuclease OS=Nocardioides sp. (strain ATCC BAA-499 / JS614)... [more]
sp|A5D3C3|YQGF_PELTS2.1e-0929.20Putative pre-16S rRNA nuclease OS=Pelotomaculum thermopropionicum (strain DSM 13... [more]
sp|Q3SR28|YQGF_NITWN6.1e-0932.12Putative pre-16S rRNA nuclease OS=Nitrobacter winogradskyi (strain ATCC 25391 / ... [more]
sp|Q2G9X2|YQGF_NOVAD1.0e-0829.32Putative pre-16S rRNA nuclease OS=Novosphingobium aromaticivorans (strain ATCC 7... [more]
sp|C6C125|YQGF_DESAD1.8e-0831.30Putative pre-16S rRNA nuclease OS=Desulfovibrio salexigens (strain ATCC 14822 / ... [more]
Match NameE-valueIdentityDescription
AT1G12244.14.2e-6968.89Polynucleotidyl transferase, ribonuclease H-like superfamily protein[more]
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006364rRNA processing
GO:0006139nucleobase-containing compound metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR012337RNaseH-like_sf
IPR037027YqgF/RNaseH-like_dom_sf
IPR005227YqgF
IPR006641YqgF/RNaseH-like_dom
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006139 nucleobase-containing compound metabolic process
biological_process GO:0006364 rRNA processing
biological_process GO:0006310 DNA recombination
biological_process GO:0031564 transcription antitermination
biological_process GO:0000967 rRNA 5'-end processing
cellular_component GO:0005575 cellular_component
molecular_function GO:0016787 hydrolase activity
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0016740 transferase activity
molecular_function GO:0003824 catalytic activity
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C05G080180.1Cla97C05G080180.1mRNA


Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006641YqgF/RNase H-like domainSMARTSM00732rnase_8scoord: 76..176
e-value: 1.9E-18
score: 77.3
IPR005227Putative pre-16S rRNA nucleaseTIGRFAMTIGR00250TIGR00250coord: 79..207
e-value: 1.3E-19
score: 68.5
IPR005227Putative pre-16S rRNA nucleasePFAMPF03652RuvXcoord: 78..207
e-value: 8.0E-28
score: 97.4
IPR005227Putative pre-16S rRNA nucleasePANTHERPTHR33317FAMILY NOT NAMEDcoord: 54..221
IPR005227Putative pre-16S rRNA nucleaseHAMAPMF_00651Nuclease_YqgFcoord: 76..211
score: 16.397
IPR037027YqgF/RNase H-like domain superfamilyGENE3DG3DSA:3.30.420.140coord: 75..209
e-value: 1.5E-29
score: 104.8
NoneNo IPR availablePANTHERPTHR33317:SF2HOLLIDAY JUNCTION RESOLVASE-RELATEDcoord: 54..221
IPR012337Ribonuclease H-like superfamilySUPERFAMILYSSF53098Ribonuclease H-likecoord: 77..207

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cla97C05G080180Silver-seed gourdcarwmbB0098
Cla97C05G080180Silver-seed gourdcarwmbB0138
Cla97C05G080180Cucurbita maxima (Rimu)cmawmbB007
Cla97C05G080180Cucurbita maxima (Rimu)cmawmbB263
Cla97C05G080180Cucurbita maxima (Rimu)cmawmbB857
Cla97C05G080180Cucurbita moschata (Rifu)cmowmbB243
Cla97C05G080180Cucurbita moschata (Rifu)cmowmbB833