MELO3C005958 (gene) Melon (DHL92) v3.5.1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.GGCGGGGGGAGGGGTTGTGATTTGTGAAAGAGCTCCGATCCATTGTTTATGTTGGGTTTTGGAATCCCCAATTCCCCCAATTCTCCCAACCATGTTTACGTTGTTGTGTGGACAATGTTTCCAATTCCAAGCCTTTCAGTTTCCGTTGCAAAGCCACAGATTACTTCACTCCCTCCATCCTCATCTCCCTCCTCCATCTCCACCAGCCCTATTTTCCAAATCCCACAACAACAACCCATTTTCTTCCATTGAACTTCCTCCCAACGCCCTCCGCCGCAAGCTCGATCCTCACTGGAGAGGAGGTTTCAGTCTAGGTGTCGACCTCGGAACCTCTCGCACTGGACTTGCTCTTAGTAAAGGCTTCTCCATTCGTCCTCTTACCGTAATTTTTTTTTCATTCTTCCCTTTATGCATTTCTCTCTACCTACTATTCTCACCACATTCATCATTCTACCTCTCCACTCTTTTCTGCATATTTTCATTTTCTCCTCAATTTTTCCTTTTTTTTTTTTTTTTAACTCAATCTTGATCCATGTTCTTATTCAATTTCATTTCTTTAACTGTTTATAATGTGGCCAACGGCGGACTGCTGTTTATTATATTGAAACTATCCTACGTTTGGGATTCATGATTTCTTTTGCTGCCTTAGGTTCTAGAGTTGCGAGGACAAAAGCTTGAGGCTAAGCTCATTCAGATTGCTGAACAGGAAGTATATATCTCTCTCCCTCTTCGACCATCTTCCTACTGAAAATGCTATCAACATGTTGGAAATTTATTTCTTCTTTTTACTTGCACATTAATTGATGGGAAATAAACTGTAGGAGGCTGATGAATTTATTATTGGACTTCCTAAATCATGCGATGGGAAAGAGACACCTCAGTCAAACAAAATTCGTAGTATTGCCGGAAGGGTGGCAGCCCGAGCAGCTGAAAGGTGAAATACACCGAATGCTTGTACTGCCTCTCCTATGTCTTTTGTTCTGTACTAATACTGCTTTTAGTTTAGGGGCTGGAGAGTTTATTTGTATGATGAACATGGGACAACAGCAGAAGCGGAAAGCCATATGATTTCCAAGTAATGTTGTCCTCAACACTCACTTATGTTGTCTTTGTTTAATATTGTTTCCTTGGATCCTATCCTATAAATTTTGGTTCATCTCCTTTATCAGTATTGTTAATATGGATTCTGTTGCCTGTAAACTATATTGCACTTAGGAGCTGTTTGGAGAGCTAGAATGTAGTGATTTACTGGGTATCAGAGGAGTATTAGGTATCATGAATTTATCAAGGTGATGCAGACAATTGGTTGTTAATTGCTATGGTAGGAATGGAGGAGATGGACACTGAGATAAAAAGGTACAAAAAATTGTCCAAAATGGAAAAGAAAACGAAACATTTAAGAAGTGCAGTTATCACCGGTAAATAAGAAATATATGGCTTGAGGATTTAATGGTCAACGAGGTGGCGGTGACCACATTCTGGTTTAATTGCCCAAAATAATCAGTTGGTTTCCAATTATATTTCCCTTCATTCCAAATAGGCAGACTAGTGCTCAAACCAACCCCAAGAGCATTGGGATGGAATCATCTACTGTTTGTGGTAGAAACTTGTTGACGAAAGCTCTTTTCTGTGGCTTGAATGTCGCTCAATGTTTGCAAAGCATTCCTTTGACATTTATGGCTGATAAAGAACAACAAATTTTTTGAAGAGAAATATGAGTGAACAGATTTGTTGGATTTAGTACATCTCCATATTTTCTTTTTTTAATTACTCTGAGTTTCCATCTATAGCTAGTTGGGAATCACTCTCCTTGGCTTGGGCTGGAGGACTCGTCACCTTTGGTGCAGTCTTCTAATCAATTGGAGTTCACCATTTCCTACTAAAAAAAGAAAAGGAGAATTTGACAAAGGCAAACAAAATCTGTAAGACTTGAGATAAAATGAATACCTTTGATGGAAACCTGGATTTTTTTTATTGCAATTGTGAAAATAGGGGTTGAAACATCTTATAGTTTCTAAATTTTTCTTCTTTTCTAGGAGAATTGGTGGCATAACGACCCTATTAGTGGTCATTGTCATAATCTTCTACCGAAGCTCAAAGGTTTTAAGTTGGCTTTTAAAGCATGGAACTCAACCTTTGGCTGTCTCTCTAATATTAAAACTAATCTCCGGAAGACCCTTGCTACGCTCAATTTTCTGGAAGATCAATGGTCTCTCGATTCCCCATCCTTTCAAAAGCACACTGAAATTAGCGCAGAGCTTTTTAAGTCCAAGTAGTTGGCTGAGTGATGAAGCTCAACTTATTTCAATCAAATCATGCCTAGTAAGAAATAGTAGGAAAAACACCATCTGGATCCTTGGTAAATATAGGTTCAACAATTTAAATGACAAAGAAATAGAAGAGGGCTTTGTTGATTTCTATAAACAGCTACCAAGAAAGCCGGTTTGAGATTCACCCCACACACAAAATGGTTGGGGATTACAAACCAAACGCTCTTATTAGATATTTATACAAGATTTTAGCAATAGTTTTCACTTAGAAGTTGAAGAAAGCTATTCCTTATACCATAACTAAATTCCAAACAGCCTTTGTGGCAAATAAGATAAATCATAGATACTTCACTTATTGCAAATTAGCTTATTGATGAATGAGGGAGCAAAGAAAAAGTAAGATTGAATGACGTGAATGATGGAGAACCTAGTCAATGACTAGAAATTTTGATACTCATGCAAATTTCTATATGAAACTGATGGAGAATGGACTCGTTTCTTGTGAGGGTTGTTGCATGGGTAGCAACACATTTTTGTGGCCTGTAATAATTGATGTTATCAGGTTTCGTTTTGCTTTTTTCACTTAATGGAAGAGAAGTGTAGAATGGGACAGCTTATATTTCAAATTGGCCTGGCGGCTGTTTTATTTTCTTTATGCAAATTAGGTGCATTGTTCACATGAGATAAAAAAAAATTGTTGTCCCACTAGTATTGGAAAGACTTCTTATTTTCTTTTACATATTTCTACTGTGGTTCTCTCTCAGTGTAAATTTTATGGCTCCCAGACCCTATCCATTCAACCGCTATGGTTAGATTGTTTGTTGCATCGACAGGAAGAACTCTGTAATTTTTCAGGCTTGTAGTCGGCTTTCCTACCCCTCTTTCCTCCACTTCTTTTGTAGTTTGAATGATCTATGAAATTGGTCGGTTTCTTATTGAAAAATAAAATAGTAATATCTTGTATCAGCAGATCTATACTTCTCTATTTGGATTGGTCACATATATCACGTATCATAATGGGGAATTAATTTTATTTTTTAATGTTTTCTTTAGGGGTCTCAATAAATCTACTAGGCAGAAGAAGATTGATGCCTATGCTGCCATGGTAAAGTGGGGGAATATTGTCATGTTTTTTAATATTGTGATGATAATAAATGCAGCAGTCCAGTCGTGTGTTCTTTTAAAAATAATTGTCTCTGACATTTTACTTTCTTTATTTGACGCAGATGGTACTAGAGAGATATTTTCTCATGTCAGGCCAGGGAACCGAACTTTTAGTGCCCAAGAGTCTAGTCTTACAAGATAAACTTATCGAGGGACCACCTACAGACCCAGACTTTAAGGATTGAGGATGTGCTTCAGGCCAGGAAAAAATAATCTGGGAGAGGCCCTTGGGGTATTTTTCTCTTTGACGGATAACAAAATTGCTATCAAACAAAGGGTATTTATTACTGTTGAAGTGGAAGAGAGCCGCAACCGACTTAGAAATGGAGGGTTACTTCCTCAAAGCATGGTCACGGAATTAGGTGAAAAGAGATACCGCTGTTCCTAATGAAGGCTCAATTGAAGGTTGCGGGTTGTGAGATGATGACGACGACGACGCTTTTGACATTATATCTTTATAACAATCTTGTCAGAATCTGTCCTCACATATTGAATTCACCTACACACTTCGGTTAGTTAAGGATGGGATTTGCTTTGGTCCGTCCTATGCACTTGTGCTTCTCCTTGATCGCCGAATCTCGTATGTACTTGGTTGAAATTATTTCTAAACGACGAAATTGATTAGATGCTGCAGTCATAATGA GGCGGGGGGAGGGGTTGTGATTTGTGAAAGAGCTCCGATCCATTGTTTATGTTGGGTTTTGGAATCCCCAATTCCCCCAATTCTCCCAACCATGTTTACGTTGTTGTGTGGACAATGTTTCCAATTCCAAGCCTTTCAGTTTCCGTTGCAAAGCCACAGATTACTTCACTCCCTCCATCCTCATCTCCCTCCTCCATCTCCACCAGCCCTATTTTCCAAATCCCACAACAACAACCCATTTTCTTCCATTGAACTTCCTCCCAACGCCCTCCGCCGCAAGCTCGATCCTCACTGGAGAGGAGGTTTCAGTCTAGGTGTCGACCTCGGAACCTCTCGCACTGGACTTGCTCTTAGTAAAGGCTTCTCCATTCGTCCTCTTACCGTTCTAGAGTTGCGAGGACAAAAGCTTGAGGCTAAGCTCATTCAGATTGCTGAACAGGAAGAGGCTGATGAATTTATTATTGGACTTCCTAAATCATGCGATGGGAAAGAGACACCTCAGTCAAACAAAATTCGTAGTATTGCCGGAAGGGTGGCAGCCCGAGCAGCTGAAAGGGGCTGGAGAGTTTATTTGTATGATGAACATGGGACAACAGCAGAAGCGGAAAGCCATATGATTTCCAAGGGTCTCAATAAATCTACTAGGCAGAAGAAGATTGATGCCTATGCTGCCATGATGGTACTAGAGAGATATTTTCTCATGTCAGGCCAGGGAACCGAACTTTTAGTGCCCAAGAGTCTAGTCTTACAAGATAAACTTATCGAGGGACCACCTACAGACCCAGACTTTAAGGATTGAGGATGTGCTTCAGGCCAGGAAAAAATAATCTGGGAGAGGCCCTTGGGGTATTTTTCTCTTTGACGGATAACAAAATTGCTATCAAACAAAGGGTATTTATTACTGTTGAAGTGGAAGAGAGCCGCAACCGACTTAGAAATGGAGGGTTACTTCCTCAAAGCATGGTCACGGAATTAGGTGAAAAGAGATACCGCTGTTCCTAATGAAGGCTCAATTGAAGGTTGCGGGTTGTGAGATGATGACGACGACGACGCTTTTGACATTATATCTTTATAACAATCTTGTCAGAATCTGTCCTCACATATTGAATTCACCTACACACTTCGGTTAGTTAAGGATGGGATTTGCTTTGGTCCGTCCTATGCACTTGTGCTTCTCCTTGATCGCCGAATCTCGTATGTACTTGGTTGAAATTATTTCTAAACGACGAAATTGATTAGATGCTGCAGTCATAATGA ATGTTTACGTTGTTGTGTGGACAATGTTTCCAATTCCAAGCCTTTCAGTTTCCGTTGCAAAGCCACAGATTACTTCACTCCCTCCATCCTCATCTCCCTCCTCCATCTCCACCAGCCCTATTTTCCAAATCCCACAACAACAACCCATTTTCTTCCATTGAACTTCCTCCCAACGCCCTCCGCCGCAAGCTCGATCCTCACTGGAGAGGAGGTTTCAGTCTAGGTGTCGACCTCGGAACCTCTCGCACTGGACTTGCTCTTAGTAAAGGCTTCTCCATTCGTCCTCTTACCGTTCTAGAGTTGCGAGGACAAAAGCTTGAGGCTAAGCTCATTCAGATTGCTGAACAGGAAGAGGCTGATGAATTTATTATTGGACTTCCTAAATCATGCGATGGGAAAGAGACACCTCAGTCAAACAAAATTCGTAGTATTGCCGGAAGGGTGGCAGCCCGAGCAGCTGAAAGGGGCTGGAGAGTTTATTTGTATGATGAACATGGGACAACAGCAGAAGCGGAAAGCCATATGATTTCCAAGGGTCTCAATAAATCTACTAGGCAGAAGAAGATTGATGCCTATGCTGCCATGATGGTACTAGAGAGATATTTTCTCATGTCAGGCCAGGGAACCGAACTTTTAGTGCCCAAGAGTCTAGTCTTACAAGATAAACTTATCGAGGGACCACCTACAGACCCAGACTTTAAGGATTGA MFTLLCGQCFQFQAFQFPLQSHRLLHSLHPHLPPPSPPALFSKSHNNNPFSSIELPPNALRRKLDPHWRGGFSLGVDLGTSRTGLALSKGFSIRPLTVLELRGQKLEAKLIQIAEQEEADEFIIGLPKSCDGKETPQSNKIRSIAGRVAARAAERGWRVYLYDEHGTTAEAESHMISKGLNKSTRQKKIDAYAAMMVLERYFLMSGQGTELLVPKSLVLQDKLIEGPPTDPDFKD*
BLAST of MELO3C005958 vs. Swiss-Prot
Match: YQGF_NOCSJ (Putative pre-16S rRNA nuclease OS=Nocardioides sp. (strain BAA-499 / JS614) GN=Noca_2408 PE=3 SV=1) HSP 1 Score: 73.6 bits (179), Expect = 3.3e-12 Identity = 50/137 (36.50%), Postives = 72/137 (52.55%), Query Frame = 1
BLAST of MELO3C005958 vs. Swiss-Prot
Match: YQGF_ECO57 (Putative pre-16S rRNA nuclease OS=Escherichia coli O157:H7 GN=yqgF PE=3 SV=1) HSP 1 Score: 69.7 bits (169), Expect = 4.8e-11 Identity = 44/135 (32.59%), Postives = 72/135 (53.33%), Query Frame = 1
BLAST of MELO3C005958 vs. Swiss-Prot
Match: YQGF_ECO5E (Putative pre-16S rRNA nuclease OS=Escherichia coli O157:H7 (strain EC4115 / EHEC) GN=yqgF PE=3 SV=1) HSP 1 Score: 69.7 bits (169), Expect = 4.8e-11 Identity = 44/135 (32.59%), Postives = 72/135 (53.33%), Query Frame = 1
BLAST of MELO3C005958 vs. Swiss-Prot
Match: YQGF_ANADE (Putative pre-16S rRNA nuclease OS=Anaeromyxobacter dehalogenans (strain 2CP-C) GN=Adeh_1232 PE=3 SV=1) HSP 1 Score: 67.0 bits (162), Expect = 3.1e-10 Identity = 43/130 (33.08%), Postives = 72/130 (55.38%), Query Frame = 1
BLAST of MELO3C005958 vs. Swiss-Prot
Match: YQGF_NITWN (Putative pre-16S rRNA nuclease OS=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) GN=Nwi_2004 PE=3 SV=1) HSP 1 Score: 67.0 bits (162), Expect = 3.1e-10 Identity = 46/137 (33.58%), Postives = 75/137 (54.74%), Query Frame = 1
BLAST of MELO3C005958 vs. TrEMBL
Match: A0A0A0L3L5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G116900 PE=3 SV=1) HSP 1 Score: 449.1 bits (1154), Expect = 3.3e-123 Identity = 221/235 (94.04%), Postives = 226/235 (96.17%), Query Frame = 1
BLAST of MELO3C005958 vs. TrEMBL
Match: A0A0R0KEA6_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_03G033200 PE=3 SV=1) HSP 1 Score: 285.0 bits (728), Expect = 8.1e-74 Identity = 146/213 (68.54%), Postives = 170/213 (79.81%), Query Frame = 1
BLAST of MELO3C005958 vs. TrEMBL
Match: A0A0B2QT40_GLYSO (Putative Holliday junction resolvase OS=Glycine soja GN=glysoja_044459 PE=3 SV=1) HSP 1 Score: 285.0 bits (728), Expect = 8.1e-74 Identity = 146/213 (68.54%), Postives = 170/213 (79.81%), Query Frame = 1
BLAST of MELO3C005958 vs. TrEMBL
Match: A0A0L9VR24_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan11g053800 PE=3 SV=1) HSP 1 Score: 284.6 bits (727), Expect = 1.1e-73 Identity = 140/180 (77.78%), Postives = 158/180 (87.78%), Query Frame = 1
BLAST of MELO3C005958 vs. TrEMBL
Match: A0A0S3SXV5_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.09G113300 PE=3 SV=1) HSP 1 Score: 284.6 bits (727), Expect = 1.1e-73 Identity = 140/180 (77.78%), Postives = 158/180 (87.78%), Query Frame = 1
BLAST of MELO3C005958 vs. TAIR10
Match: AT1G12244.1 (AT1G12244.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein) HSP 1 Score: 260.4 bits (664), Expect = 1.1e-69 Identity = 123/180 (68.33%), Postives = 152/180 (84.44%), Query Frame = 1
BLAST of MELO3C005958 vs. NCBI nr
Match: gi|659074761|ref|XP_008437782.1| (PREDICTED: uncharacterized protein LOC103483114 [Cucumis melo]) HSP 1 Score: 477.6 bits (1228), Expect = 1.2e-131 Identity = 235/235 (100.00%), Postives = 235/235 (100.00%), Query Frame = 1
BLAST of MELO3C005958 vs. NCBI nr
Match: gi|449431960|ref|XP_004133768.1| (PREDICTED: uncharacterized protein LOC101219287 isoform X1 [Cucumis sativus]) HSP 1 Score: 449.1 bits (1154), Expect = 4.7e-123 Identity = 221/235 (94.04%), Postives = 226/235 (96.17%), Query Frame = 1
BLAST of MELO3C005958 vs. NCBI nr
Match: gi|778676650|ref|XP_011650631.1| (PREDICTED: uncharacterized protein LOC101219287 isoform X2 [Cucumis sativus]) HSP 1 Score: 375.9 bits (964), Expect = 5.0e-101 Identity = 184/196 (93.88%), Postives = 189/196 (96.43%), Query Frame = 1
BLAST of MELO3C005958 vs. NCBI nr
Match: gi|778676652|ref|XP_011650632.1| (PREDICTED: uncharacterized protein LOC101219287 isoform X3 [Cucumis sativus]) HSP 1 Score: 343.2 bits (879), Expect = 3.6e-91 Identity = 167/178 (93.82%), Postives = 171/178 (96.07%), Query Frame = 1
BLAST of MELO3C005958 vs. NCBI nr
Match: gi|720012470|ref|XP_010259874.1| (PREDICTED: uncharacterized protein LOC104599161 [Nelumbo nucifera]) HSP 1 Score: 285.0 bits (728), Expect = 1.2e-73 Identity = 138/180 (76.67%), Postives = 159/180 (88.33%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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