Cucsa.358920 (gene) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CACACAAGGATAACTCACATCCAAATTTGAGCAAAAATGAGGTCAGTTGTTCTCATTTGCTTCATTTTGAGCTTAGTTGCCGGAAAATCCACAGCTGTAATAGAGGTGTCGAAGTGCTATCTCAACTGCATGGCAGTGTGTGCTGTCCCATCAAGCCTTCTCACGGTAGGCCTTTGTGCTTTAAAATGCACAGCTGATTGCATTGCCATTGCTTCTTCCCCTATGAATTTGAACCGTGTGGACACTCGTTACTTTTGTAAACTTGGTTGTGCCACCTCTTGTTGCACCAAATCCAGCACCAAGAAAGACTTTGGTCAGTAACTTTCTAATACTTCCGTTACTACTTATTTTAATTATTATATATATATATATTCTGTCATTTAGATTTTCTGTCGATTGATTCTGTGACATAACACATTATTTTTCTCAAATTTCTAGAGTTAACCCTTGTCATGAGTGACAGTCAATAAGACTGGTAGTATTTATATATTAAATTTTTATCTCATTATTTCTAGAGTTTTGATGGATGTTTCAATCATGTTGGATTATTTTTTATGAACTTGGCAGCCGAGAAGAAAGTAGAAAGCTGTGTGAACACGTGTGATCAAATATGCATGAAAGCTTAAGAAGCCAAAAAGATGAAAGGAGAAAGAGCTGGGATTGGCTTCAATGAATAAACAAAAATCAGTGGTTAAAAAAAAACCATTGGTTTAAAAGCCATATTCCAAATTTAAGCGCATATATATATATATAGTCTCAAGGTTGTTCACGTTATGCTTTACTCAATATGAAAAAAAATACGGTTGTAGTGCTTTTTCTATGATTATATGAGAAAATGAAGTGTTATGCTTTACTTTTACCAATGTCTATTCATTAATTACATATTTAAGTGTGTGTGTTTGAAGTGGTGTTGTAATTAAGAGATATATAATTAATAATCTCACAATCATATACTTTATTTATTCTATTAAAATCCTACCAGAATTAATCTAACACAATATTAGAAAACCTAAAGAGAGGTCATCTTTGATCACATAGACTAAAAAAATATAGTCATTAGTTCCTAGAAAGACGGTGTTAATTTTTCTTCTATTGAAGTATTATACGAAACCTATTTGGGTTTGTCGTCAAGTAGTTGATATGTGCCTTTGTACCCCTACTTATCTATATCTTCCCAT CACACAAGGATAACTCACATCCAAATTTGAGCAAAAATGAGGTCAGTTGTTCTCATTTGCTTCATTTTGAGCTTAGTTGCCGGAAAATCCACAGCTGTAATAGAGGTGTCGAAGTGCTATCTCAACTGCATGGCAGTGTGTGCTGTCCCATCAAGCCTTCTCACGGTAGGCCTTTGTGCTTTAAAATGCACAGCTGATTGCATTGCCATTGCTTCTTCCCCTATGAATTTGAACCGTGTGGACACTCGTTACTTTTGTAAACTTGGTTGTGCCACCTCTTGTTGCACCAAATCCAGCACCAAGAAAGACTTTGCCGAGAAGAAAGTAGAAAGCTGTGTGAACACGTGTGATCAAATATGCATGAAAGCTTAAGAAGCCAAAAAGATGAAAGGAGAAAGAGCTGGGATTGGCTTCAATGAATAAACAAAAATCAGTGGTTAAAAAAAAACCATTGGTTTAAAAGCCATATTCCAAATTTAAGCGCATATATATATATATAGTCTCAAGGTTGTTCACGTTATGCTTTACTCAATATGAAAAAAAATACGGTTGTAGTGCTTTTTCTATGATTATATGAGAAAATGAAGTGTTATGCTTTACTTTTACCAATGTCTATTCATTAATTACATATTTAAGTGTGTGTGTTTGAAGTGGTGTTGTAATTAAGAGATATATAATTAATAATCTCACAATCATATACTTTATTTATTCTATTAAAATCCTACCAGAATTAATCTAACACAATATTAGAAAACCTAAAGAGAGGTCATCTTTGATCACATAGACTAAAAAAATATAGTCATTAGTTCCTAGAAAGACGGTGTTAATTTTTCTTCTATTGAAGTATTATACGAAACCTATTTGGGTTTGTCGTCAAGTAGTTGATATGTGCCTTTGTACCCCTACTTATCTATATCTTCCCAT ATGAGGTCAGTTGTTCTCATTTGCTTCATTTTGAGCTTAGTTGCCGGAAAATCCACAGCTGTAATAGAGGTGTCGAAGTGCTATCTCAACTGCATGGCAGTGTGTGCTGTCCCATCAAGCCTTCTCACGGTAGGCCTTTGTGCTTTAAAATGCACAGCTGATTGCATTGCCATTGCTTCTTCCCCTATGAATTTGAACCGTGTGGACACTCGTTACTTTTGTAAACTTGGTTGTGCCACCTCTTGTTGCACCAAATCCAGCACCAAGAAAGACTTTGCCGAGAAGAAAGTAGAAAGCTGTGTGAACACGTGTGATCAAATATGCATGAAAGCTTAA MRSVVLICFILSLVAGKSTAVIEVSKCYLNCMAVCAVPSSLLTVGLCALKCTADCIAIASSPMNLNRVDTRYFCKLGCATSCCTKSSTKKDFAEKKVESCVNTCDQICMKA*
BLAST of Cucsa.358920 vs. Swiss-Prot
Match: THNL2_ARATH (Thionin-like protein 2 OS=Arabidopsis thaliana GN=At1g12663 PE=3 SV=1) HSP 1 Score: 64.3 bits (155), Expect = 9.6e-10 Identity = 34/110 (30.91%), Postives = 58/110 (52.73%), Query Frame = 1
BLAST of Cucsa.358920 vs. TrEMBL
Match: A0A0A0KC18_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G446640 PE=4 SV=1) HSP 1 Score: 124.4 bits (311), Expect = 8.7e-26 Identity = 64/103 (62.14%), Postives = 73/103 (70.87%), Query Frame = 1
BLAST of Cucsa.358920 vs. TrEMBL
Match: V4ULM8_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10027058mg PE=4 SV=1) HSP 1 Score: 99.8 bits (247), Expect = 2.3e-18 Identity = 51/108 (47.22%), Postives = 68/108 (62.96%), Query Frame = 1
BLAST of Cucsa.358920 vs. TrEMBL
Match: A0A067ECA0_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g037489mg PE=4 SV=1) HSP 1 Score: 99.0 bits (245), Expect = 3.9e-18 Identity = 50/108 (46.30%), Postives = 68/108 (62.96%), Query Frame = 1
BLAST of Cucsa.358920 vs. TrEMBL
Match: F6HX25_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_09s0002g04840 PE=4 SV=1) HSP 1 Score: 95.9 bits (237), Expect = 3.3e-17 Identity = 46/108 (42.59%), Postives = 69/108 (63.89%), Query Frame = 1
BLAST of Cucsa.358920 vs. TrEMBL
Match: A0A061GI20_THECC (To encode a PR protein, Belongs to the plant thionin family with the following members:, putative OS=Theobroma cacao GN=TCM_028643 PE=4 SV=1) HSP 1 Score: 95.5 bits (236), Expect = 4.3e-17 Identity = 50/109 (45.87%), Postives = 72/109 (66.06%), Query Frame = 1
BLAST of Cucsa.358920 vs. TAIR10
Match: AT1G12663.1 (AT1G12663.1 Predicted to encode a PR (pathogenesis-related) protein. Belongs to the plant thionin (PR-13) family with the following members: At1g66100, At5g36910, At1g72260, At2g15010, At1g12663, At1g12660.) HSP 1 Score: 64.3 bits (155), Expect = 5.4e-11 Identity = 34/110 (30.91%), Postives = 58/110 (52.73%), Query Frame = 1
BLAST of Cucsa.358920 vs. NCBI nr
Match: gi|449470525|ref|XP_004152967.1| (PREDICTED: thionin-like protein 2 [Cucumis sativus]) HSP 1 Score: 229.2 bits (583), Expect = 3.6e-57 Identity = 111/111 (100.00%), Postives = 111/111 (100.00%), Query Frame = 1
BLAST of Cucsa.358920 vs. NCBI nr
Match: gi|659131068|ref|XP_008465492.1| (PREDICTED: thionin-like protein 2 [Cucumis melo]) HSP 1 Score: 157.5 bits (397), Expect = 1.3e-35 Identity = 75/111 (67.57%), Postives = 89/111 (80.18%), Query Frame = 1
BLAST of Cucsa.358920 vs. NCBI nr
Match: gi|700190113|gb|KGN45346.1| (hypothetical protein Csa_7G446640 [Cucumis sativus]) HSP 1 Score: 124.4 bits (311), Expect = 1.3e-25 Identity = 64/103 (62.14%), Postives = 73/103 (70.87%), Query Frame = 1
BLAST of Cucsa.358920 vs. NCBI nr
Match: gi|567868875|ref|XP_006427059.1| (hypothetical protein CICLE_v10027058mg [Citrus clementina]) HSP 1 Score: 99.8 bits (247), Expect = 3.3e-18 Identity = 51/108 (47.22%), Postives = 68/108 (62.96%), Query Frame = 1
BLAST of Cucsa.358920 vs. NCBI nr
Match: gi|641829732|gb|KDO48842.1| (hypothetical protein CISIN_1g037489mg [Citrus sinensis]) HSP 1 Score: 99.0 bits (245), Expect = 5.6e-18 Identity = 50/108 (46.30%), Postives = 68/108 (62.96%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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