Cp4.1LG12g07950 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG12g07950
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionUnknown protein
LocationCp4.1LG12 : 6656248 .. 6659138 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGTCAGGTGTTGTAATATGTTTGGTTTTGAGCATAGTTATGGGCACCGGTAGCTCCCAACACTTGGGCATGCCAGACTTGTCGAGTAACCCATATTGCTATGCCTTCTGCGTGTTCCCCTGCTTCACTGGCCCCGTCGAATGTGCATTATGCATAGGAAAATGCATATTATCTGCCCAAGACTCCCCCATGGATATCAATCACATGAACAATGCTTACTTTTGCAAGCTCGGGTGTGCCACTTCTCGCTGCACTAGGCTCCTCTCCAACGCTCGAACAGGTCAAGCTACTCGATCTCTTCAAAATTTTAATTCCATTTTTCGTTAATATATATGTTTAGGTACGTTTACATATATATATATGTACGTGCCCATGTGTCTAAATATGCTAATAAAATTTTGTTGTGAACGTGACAGATGGGAAGAAAGTCGAAGGATGTGTTGACTCGTGCTCTCGAACATGCTCCAATAGGAAGAATTAATGAAGGAAAACGAAATTATGTGGAAGTAAATGAATAAATAAATAAATAAATAAATGTCAAATATTGGTGATAATAAACCATTTGACTATGAAGCTAAATCCTAGATTAAGTTAAGGTGTGTATTATTAGTATTATAAGTAAATAAATAAAAAATAAGAATATCTTATGAGAATATTCATGAAAATTATATTATGACTGGGTTAATTATTATAATTTTGACCTTATTTTTAATAATTATATTCATAAGCATAATTAAAATAAGAAATTTTAAATAATAAAATATGAATGAAGTCAGCCACTTTTCCTGTAGTGGTCAGCTCGTTCTTGACAGATCCGATTGGTGTTCATAATCTGGAGTAAAAGGATCCAAACCTTTGCATGTCGGTACCAAAAATCGATGTCTTACCACTTAGCTATACTTCATAGGGCCTTGTTTTGAACGGTAGAACGGGGAGAGGGAGAAGGGAGAAACAGGGCGAGACCGAAAGGAGAAGAGCCGTGCAAGAGCGCAGGGATATAGCAAGTAAGCAGCAAGATTCTCTCTTGTTGGACCGACTAAATATCATCCATAGGTATGTATGTCTCGTAGAGAATTAATGTCATGAAAGGAATGAAAGTATTATGTAAATCATGACTCGTATACCACGTCGGGACAACGGACTTATCCCGACCATTCTGAAATCAAAATGTCCATACAAATAGTGCAAGTTGACCTAAAATGTTGACTATGTACAGAACTTCCATAATGAAGCGTAGATTATGTTTGGTTTTTTTTGATAAGATTAAGAAATCAGAGCAATTGGTGATCTTGATTTCTCTAATGGAAAACATCATGAAATTCACAAATTTCTGTCTACTTATAAGTATTGTCTGACTCATGCATTAAGGGTTTGAATGACAAAATATTGCTAAATGGGTATCTAACTAACTCATAAAAGAATGAACAAAAACTTGCAATTTTATATTTTCTCCCAATTTTAAAATACAAAGAATCAAATATTGTGCAATCATATTGCGACACGTGGATCTCAATAGTCTGAATACTCGGTAGTGAGGAGGGTTGGTGATATGTAACGACTCATGCACAAGATTCAGAATTTGAATTCGGCACTTGATGACTTCGACATTGTGAGATCCCACATCGATTGGAGATGGGAACAAAACATTTTTTTATAAGGGTGTAGAAACCTCTTTCTAGTAAACGCGTTTTAAAACCGTGAGGCTGACAACGATACGTAATGAGTCAAAGTGGACATTATTTGTTAGCAGTGGACTTAGACTGTAACAAATGGTATCAGAGTCAGGTACCGACGATGTGTCAGGGGGGACGTTAAGCCCTCAAGAGGGATGGATTTTGAGATTTCACATCGGTTGGAGAGGGAAATGAAACATTCCTTATAAGGGGGTAGAAACCTCTCTCTAATAGATGCATTTTAAAACTGTGAGGCTGATAGCGATATGTATTGGATCAAAGCGGATAATATATGCTAGCGGTGGGCTTGGACTGTTACGAATGGTATTAGAGTCAGACACAAAGCGGTATACCAGTGAGGACGTGGAGGAGATCCCACATTGGTTAGAGAAGAGAACGAAACATTCCTTATAAGGATGTGGAAACCTTTCCCTAGTAGGCCCGTTTCTAAACCGTAAGGGCCGACGGCAATACGTTACGAGTCAAAGCAGACAATATCTCCTAATGGTGTGCTTGGACTGTTACAGGCATTTTCGTGCATCTCTTACAACATGATCACGTTACCATCTTCTCGCTTCTTGAACCCCACATACGAATAAATAGAAACCTTTTGAGGAGTATTTTTGAATGGAAGACTTAGCTTAAGTCAAGGCTTGAATCATTTTCCTGCTGCTTATTTTCCACAAGCCAAGTGGTTATTTAAGAACGACCACTCTTCCCCAAAGCCTCACATTGAAGAGTGAATGAAAATGAAGTCAGTTGTTATAATTTGCTTCATTCTGAGCTTAGTGGCAGGAAGGTCCACAGCGTCCTTTAGGAAGTGCTACGCCAAGTGCTTCGTAGCGTGTGCTATCACACCAGGCATCACCCTTGGCACCTGCGGTGCAACGTGCTTGGCGAAGTGCCTGTTCATTGCATCAGCCCCAATGGATTTCAACCATATGGACACTCATTACTTCTGCAAACTTGGGTGTGCCACTTCCATGTGCACCAAATTCAGCACCAAGAACGACCCATGTGAGCAAAATTTCCTGTACCCATTTCTTCGTTTCTTATTTTTCAAACATGTTTTCATTTTGTGTTCTTATGAACTTGGCAGCTGAGAAGAAAGTGGAAAGGTGTGTGGACTCGTGCGCTGGAACATGCATCAAAGCTTAGAAAGCAGAAACATGAAGAAGGGAGGAGAAGGAGCTGGGATTGGCCTTAACACCATCA

mRNA sequence

ATGAAGTCAGGTGTTGTAATATGTTTGGTTTTGAGCATAGTTATGGGCACCGGTAGCTCCCAACACTTGGGCATGCCAGACTTGTCGAGTAACCCATATTGCTATGCCTTCTGCGTGTTCCCCTGCTTCACTGGCCCCGTCGAATGTGCATTATGCATAGGAAAATGCATATTATCTGCCCAAGACTCCCCCATGGATATCAATCACATGAACAATGCTTACTTTTGCAAGCTCGGGTGTGCCACTTCTCGCTGCACTAGGCTCCTCTCCAACGCTCGAACAGGAAGGTCCACAGCGTCCTTTAGGAAGTGCTACGCCAAGTGCTTCGTAGCGTGTGCTATCACACCAGGCATCACCCTTGGCACCTGCGGTGCAACGTGCTTGGCGAAGTGCCTGTTCATTGCATCAGCCCCAATGGATTTCAACCATATGGACACTCATTACTTCTGCAAACTTGGGTGTGCCACTTCCATGTGCACCAAATTCAGCACCAAGAACGACCCATCTGAGAAGAAAGTGGAAAGGTGTGTGGACTCGTGCGCTGGAACATGCATCAAAGCTTAGAAAGCAGAAACATGAAGAAGGGAGGAGAAGGAGCTGGGATTGGCCTTAACACCATCA

Coding sequence (CDS)

ATGAAGTCAGGTGTTGTAATATGTTTGGTTTTGAGCATAGTTATGGGCACCGGTAGCTCCCAACACTTGGGCATGCCAGACTTGTCGAGTAACCCATATTGCTATGCCTTCTGCGTGTTCCCCTGCTTCACTGGCCCCGTCGAATGTGCATTATGCATAGGAAAATGCATATTATCTGCCCAAGACTCCCCCATGGATATCAATCACATGAACAATGCTTACTTTTGCAAGCTCGGGTGTGCCACTTCTCGCTGCACTAGGCTCCTCTCCAACGCTCGAACAGGAAGGTCCACAGCGTCCTTTAGGAAGTGCTACGCCAAGTGCTTCGTAGCGTGTGCTATCACACCAGGCATCACCCTTGGCACCTGCGGTGCAACGTGCTTGGCGAAGTGCCTGTTCATTGCATCAGCCCCAATGGATTTCAACCATATGGACACTCATTACTTCTGCAAACTTGGGTGTGCCACTTCCATGTGCACCAAATTCAGCACCAAGAACGACCCATCTGAGAAGAAAGTGGAAAGGTGTGTGGACTCGTGCGCTGGAACATGCATCAAAGCTTAG

Protein sequence

MKSGVVICLVLSIVMGTGSSQHLGMPDLSSNPYCYAFCVFPCFTGPVECALCIGKCILSAQDSPMDINHMNNAYFCKLGCATSRCTRLLSNARTGRSTASFRKCYAKCFVACAITPGITLGTCGATCLAKCLFIASAPMDFNHMDTHYFCKLGCATSMCTKFSTKNDPSEKKVERCVDSCAGTCIKA
Homology
[Close]
BLAST of Cp4.1LG12g07950 vs. Swiss-Prot
Match: THNL2_ARATH (Thionin-like protein 2 OS=Arabidopsis thaliana GN=At1g12663 PE=3 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 5.5e-10
Identity = 38/98 (38.78%), Postives = 53/98 (54.08%), Query Frame = 1 

Query: 92  ARTGRSTASFRKCYAKCFVAC-AITPGITLGTCGATCLAKCLFIASAP-MDFNHMD-THY 151
           A+T      F++CY  C V C A +       C  TC  +CL   S P +  N++D + Y
Sbjct: 16  AQTAAQKIPFKECYPACLVECKAGSKFPKYLKCPFTCTKECLQQPSPPSVSSNNIDESDY 75

Query: 152 FCKLGCATSMCTKFSTKNDPSEKKVERCVDSCAGTCIK 187
           FCKLGCAT  C   S+  +P+ ++V  CVDSC+  C K
Sbjct: 76  FCKLGCATYHCVSLSSIQNPNVERVSACVDSCSNKCTK 113

[Close]
BLAST of Cp4.1LG12g07950 vs. TrEMBL
Match: A0A0A0KC18_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G446640 PE=4 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 1.2e-30
Identity = 63/77 (81.82%), Postives = 68/77 (88.31%), Query Frame = 1 

Query: 95  GRSTASFRKCYAKCFVACAITPGITLGTCGATCLAKCLFIASAPMDFNHMDTHYFCKLGC 154
           GRSTASF KCYAKCF+ CAITPGI +GTCGA CLA CLFIAS+PMD N+MDTHYFCKLGC
Sbjct: 16  GRSTASFGKCYAKCFIVCAITPGIPVGTCGAKCLADCLFIASSPMDLNYMDTHYFCKLGC 75

Query: 155 ATSMCTKFSTKNDPSEK 172
           ATS CTKFSTK DP +K
Sbjct: 76  ATSRCTKFSTKKDPGKK 92

[Close]
BLAST of Cp4.1LG12g07950 vs. TrEMBL
Match: A0A061GC54_THECC (To encode a PR protein, Belongs to the plant thionin family with the following members:, putative OS=Theobroma cacao GN=TCM_028663 PE=4 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 2.7e-27
Identity = 72/186 (38.71%), Postives = 93/186 (50.00%), Query Frame = 1 

Query: 5   VVICLVLSIVMGTGSSQHLGMPDLSSNPYCYAFCVFPCFTGPVECAL-CIGKCILSAQDS 64
           +++CLVL  ++G  ++Q            CYA C  PC          C  KC+      
Sbjct: 10  LMVCLVLGTLVGQSTAQ--------GTILCYAACFIPCMADSTTTTFYCAAKCLKDCILP 69

Query: 65  PMDINHMNNA-YFCKLGCATSRCTRLLSNARTGRSTASFRK--CYAKCFVACAITPGITL 124
              +  + +  YFCKLGCAT+ CT + +    G+STA      CYA CF+ C   P  T 
Sbjct: 70  KSTVGGIKDTQYFCKLGCATALCTNISTKEDPGQSTAQGTNVLCYAACFIPCMADPNTTT 129

Query: 125 GTCGATCLAKCLFIASAPMDFNHMDTHYFCKLGCATSMCTKFSTKNDPSEKKVERCVDSC 184
             C   CL  C+   S        DT YFCKLGCAT++CT  STK DP EKKV  CVD+C
Sbjct: 130 FYCTIKCLKNCILPKSTVGGIK--DTQYFCKLGCATALCTNISTKEDPGEKKVGSCVDAC 185

Query: 185 AGTCIK 187
           + TC K
Sbjct: 190 SATCAK 185

[Close]
BLAST of Cp4.1LG12g07950 vs. TrEMBL
Match: A0A0A0K781_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G441625 PE=4 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 1.1e-20
Identity = 54/103 (52.43%), Postives = 66/103 (64.08%), Query Frame = 1 

Query: 88  LLSNARTGRSTASFRKCYAKCFVACAITPGITLGTCGATCLAKCLFIASAPMDF------ 147
           LL++  T  ST SF++CYA CFV CAITPG+    C   CL  C+ + S P+D       
Sbjct: 16  LLTSLSTANST-SFQECYATCFVICAITPGVAFSDCPLRCLQACI-VPSFPIDDADVVHR 75

Query: 148 NHMDTHYFCKLGCATSMCTKFSTKNDPSEKKVERCVDSCAGTC 185
                H+FCKLGCA S CTKFSTK +P E+KV RCVDSC+ TC
Sbjct: 76  QQQQNHFFCKLGCAASSCTKFSTKQNPGERKVGRCVDSCSQTC 116

[Close]
BLAST of Cp4.1LG12g07950 vs. TrEMBL
Match: V4ST32_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10026803mg PE=4 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 1.4e-20
Identity = 49/99 (49.49%), Postives = 68/99 (68.69%), Query Frame = 1 

Query: 88  LLSNARTGRSTASFRKCYAKCFVACAITPGITLGTCGATCLAKCLFIASAPMDFNHMDTH 147
           L++    G+S A+F++CY  CF+ C ITPG TLG+C A CL  C+F        +  DT 
Sbjct: 14  LMTGLLVGQSQAAFKECYETCFIICYITPGTTLGSCAAKCLKDCIFPPKLHT-LSLQDTE 73

Query: 148 YFCKLGCATSMCTKFSTKNDPSEKKVERCVDSCAGTCIK 187
           YFCKLGCATS+CT  S+K++P+ +KVE CV+SC+ +C K
Sbjct: 74  YFCKLGCATSLCTNLSSKDNPAGEKVEGCVNSCSKSCSK 111

[Close]
BLAST of Cp4.1LG12g07950 vs. TrEMBL
Match: A0A067E0U5_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g033731mg PE=4 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 1.4e-20
Identity = 49/99 (49.49%), Postives = 68/99 (68.69%), Query Frame = 1 

Query: 88  LLSNARTGRSTASFRKCYAKCFVACAITPGITLGTCGATCLAKCLFIASAPMDFNHMDTH 147
           L++    G+S A+F++CY  CF+ C ITPG TLG+C A CL  C+F        +  DT 
Sbjct: 14  LMTGLLVGQSQAAFKECYETCFIICYITPGTTLGSCAAKCLKDCIFPPKLHT-LSLQDTE 73

Query: 148 YFCKLGCATSMCTKFSTKNDPSEKKVERCVDSCAGTCIK 187
           YFCKLGCATS+CT  S+K++P+ +KVE CV+SC+ +C K
Sbjct: 74  YFCKLGCATSLCTNLSSKDNPAGEKVEGCVNSCSKSCSK 111

[Close]
BLAST of Cp4.1LG12g07950 vs. TAIR10
Match: AT1G12663.1 (AT1G12663.1 Predicted to encode a PR (pathogenesis-related) protein. Belongs to the plant thionin (PR-13) family with the following members: At1g66100, At5g36910, At1g72260, At2g15010, At1g12663, At1g12660.)

HSP 1 Score: 65.9 bits (159), Expect = 3.1e-11
Identity = 38/98 (38.78%), Postives = 53/98 (54.08%), Query Frame = 1 

Query: 92  ARTGRSTASFRKCYAKCFVAC-AITPGITLGTCGATCLAKCLFIASAP-MDFNHMD-THY 151
           A+T      F++CY  C V C A +       C  TC  +CL   S P +  N++D + Y
Sbjct: 16  AQTAAQKIPFKECYPACLVECKAGSKFPKYLKCPFTCTKECLQQPSPPSVSSNNIDESDY 75

Query: 152 FCKLGCATSMCTKFSTKNDPSEKKVERCVDSCAGTCIK 187
           FCKLGCAT  C   S+  +P+ ++V  CVDSC+  C K
Sbjct: 76  FCKLGCATYHCVSLSSIQNPNVERVSACVDSCSNKCTK 113

[Close]
BLAST of Cp4.1LG12g07950 vs. TAIR10
Match: AT1G12672.2 (AT1G12672.2 unknown protein)

HSP 1 Score: 53.5 bits (127), Expect = 1.6e-07
Identity = 27/63 (42.86%), Postives = 36/63 (57.14%), Query Frame = 1 

Query: 126 TCLAKCLFIASAPMD----FNHMDTHYFCKLGCATSMCTKFSTKNDPSEKKVERCVDSCA 185
           +C+  CL   S+ MD     NH D  Y+CKLGC+T  C   S+  +P+  KV  CVDSC+
Sbjct: 40  SCIKTCLEPPSSQMDSTNEINHND--YYCKLGCSTHHCASLSSIQNPNVDKVVDCVDSCS 99

[Close]
BLAST of Cp4.1LG12g07950 vs. NCBI nr
Match: gi|700190113|gb|KGN45346.1| (hypothetical protein Csa_7G446640 [Cucumis sativus])

HSP 1 Score: 141.4 bits (355), Expect = 1.7e-30
Identity = 63/77 (81.82%), Postives = 68/77 (88.31%), Query Frame = 1 

Query: 95  GRSTASFRKCYAKCFVACAITPGITLGTCGATCLAKCLFIASAPMDFNHMDTHYFCKLGC 154
           GRSTASF KCYAKCF+ CAITPGI +GTCGA CLA CLFIAS+PMD N+MDTHYFCKLGC
Sbjct: 16  GRSTASFGKCYAKCFIVCAITPGIPVGTCGAKCLADCLFIASSPMDLNYMDTHYFCKLGC 75

Query: 155 ATSMCTKFSTKNDPSEK 172
           ATS CTKFSTK DP +K
Sbjct: 76  ATSRCTKFSTKKDPGKK 92

[Close]
BLAST of Cp4.1LG12g07950 vs. NCBI nr
Match: gi|590618523|ref|XP_007024070.1| (To encode a PR protein, Belongs to the plant thionin family with the following members:, putative [Theobroma cacao])

HSP 1 Score: 130.2 bits (326), Expect = 3.8e-27
Identity = 72/186 (38.71%), Postives = 93/186 (50.00%), Query Frame = 1 

Query: 5   VVICLVLSIVMGTGSSQHLGMPDLSSNPYCYAFCVFPCFTGPVECAL-CIGKCILSAQDS 64
           +++CLVL  ++G  ++Q            CYA C  PC          C  KC+      
Sbjct: 10  LMVCLVLGTLVGQSTAQ--------GTILCYAACFIPCMADSTTTTFYCAAKCLKDCILP 69

Query: 65  PMDINHMNNA-YFCKLGCATSRCTRLLSNARTGRSTASFRK--CYAKCFVACAITPGITL 124
              +  + +  YFCKLGCAT+ CT + +    G+STA      CYA CF+ C   P  T 
Sbjct: 70  KSTVGGIKDTQYFCKLGCATALCTNISTKEDPGQSTAQGTNVLCYAACFIPCMADPNTTT 129

Query: 125 GTCGATCLAKCLFIASAPMDFNHMDTHYFCKLGCATSMCTKFSTKNDPSEKKVERCVDSC 184
             C   CL  C+   S        DT YFCKLGCAT++CT  STK DP EKKV  CVD+C
Sbjct: 130 FYCTIKCLKNCILPKSTVGGIK--DTQYFCKLGCATALCTNISTKEDPGEKKVGSCVDAC 185

Query: 185 AGTCIK 187
           + TC K
Sbjct: 190 SATCAK 185

[Close]
BLAST of Cp4.1LG12g07950 vs. NCBI nr
Match: gi|659122243|ref|XP_008461039.1| (PREDICTED: thionin-like protein 2 [Cucumis melo])

HSP 1 Score: 111.3 bits (277), Expect = 1.8e-21
Identity = 55/103 (53.40%), Postives = 69/103 (66.99%), Query Frame = 1 

Query: 88  LLSNARTGRSTASFRKCYAKCFVACAITPGITLGTCGATCLAKCLFIASAPMDFNHM--- 147
           LL++  T  ST SF++CYA CFV CAITPG+    C   CL  C+ + S P+D + +   
Sbjct: 16  LLTSLSTANST-SFQECYATCFVICAITPGVAFSDCPLRCLQACI-VPSFPIDDDDVVHR 75

Query: 148 ---DTHYFCKLGCATSMCTKFSTKNDPSEKKVERCVDSCAGTC 185
                H+FCKLGCA S CTKFSTK +P E+KVERCVDSC+ TC
Sbjct: 76  QKQQNHFFCKLGCAASSCTKFSTKQNPGERKVERCVDSCSQTC 116

[Close]
BLAST of Cp4.1LG12g07950 vs. NCBI nr
Match: gi|778729254|ref|XP_011659556.1| (PREDICTED: thionin-like protein 2 [Cucumis sativus])

HSP 1 Score: 108.2 bits (269), Expect = 1.6e-20
Identity = 54/103 (52.43%), Postives = 66/103 (64.08%), Query Frame = 1 

Query: 88  LLSNARTGRSTASFRKCYAKCFVACAITPGITLGTCGATCLAKCLFIASAPMDF------ 147
           LL++  T  ST SF++CYA CFV CAITPG+    C   CL  C+ + S P+D       
Sbjct: 16  LLTSLSTANST-SFQECYATCFVICAITPGVAFSDCPLRCLQACI-VPSFPIDDADVVHR 75

Query: 148 NHMDTHYFCKLGCATSMCTKFSTKNDPSEKKVERCVDSCAGTC 185
                H+FCKLGCA S CTKFSTK +P E+KV RCVDSC+ TC
Sbjct: 76  QQQQNHFFCKLGCAASSCTKFSTKQNPGERKVGRCVDSCSQTC 116

[Close]
BLAST of Cp4.1LG12g07950 vs. NCBI nr
Match: gi|567868869|ref|XP_006427056.1| (hypothetical protein CICLE_v10026803mg [Citrus clementina])

HSP 1 Score: 107.8 bits (268), Expect = 2.0e-20
Identity = 49/99 (49.49%), Postives = 68/99 (68.69%), Query Frame = 1 

Query: 88  LLSNARTGRSTASFRKCYAKCFVACAITPGITLGTCGATCLAKCLFIASAPMDFNHMDTH 147
           L++    G+S A+F++CY  CF+ C ITPG TLG+C A CL  C+F        +  DT 
Sbjct: 14  LMTGLLVGQSQAAFKECYETCFIICYITPGTTLGSCAAKCLKDCIFPPKLHT-LSLQDTE 73

Query: 148 YFCKLGCATSMCTKFSTKNDPSEKKVERCVDSCAGTCIK 187
           YFCKLGCATS+CT  S+K++P+ +KVE CV+SC+ +C K
Sbjct: 74  YFCKLGCATSLCTNLSSKDNPAGEKVEGCVNSCSKSCSK 111

The following BLAST results are available for this feature:
BLAST of Cp4.1LG12g07950 vs. Swiss-Prot
Match NameE-valueIdentityDescription
THNL2_ARATH5.5e-1038.78Thionin-like protein 2 OS=Arabidopsis thaliana GN=At1g12663 PE=3 SV=1[more]
BLAST of Cp4.1LG12g07950 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KC18_CUCSA1.2e-3081.82Uncharacterized protein OS=Cucumis sativus GN=Csa_7G446640 PE=4 SV=1[more]
A0A061GC54_THECC2.7e-2738.71To encode a PR protein, Belongs to the plant thionin family with the following m... [more]
A0A0A0K781_CUCSA1.1e-2052.43Uncharacterized protein OS=Cucumis sativus GN=Csa_7G441625 PE=4 SV=1[more]
V4ST32_9ROSI1.4e-2049.49Uncharacterized protein OS=Citrus clementina GN=CICLE_v10026803mg PE=4 SV=1[more]
A0A067E0U5_CITSI1.4e-2049.49Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g033731mg PE=4 SV=1[more]
BLAST of Cp4.1LG12g07950 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G12663.13.1e-1138.78 Predicted to encode a PR (pathogenesis-related) protein. Belongs to... [more]
AT1G12672.21.6e-0742.86 unknown protein[more]
BLAST of Cp4.1LG12g07950 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700190113|gb|KGN45346.1|1.7e-3081.82hypothetical protein Csa_7G446640 [Cucumis sativus][more]
gi|590618523|ref|XP_007024070.1|3.8e-2738.71To encode a PR protein, Belongs to the plant thionin family with the following m... [more]
gi|659122243|ref|XP_008461039.1|1.8e-2153.40PREDICTED: thionin-like protein 2 [Cucumis melo][more]
gi|778729254|ref|XP_011659556.1|1.6e-2052.43PREDICTED: thionin-like protein 2 [Cucumis sativus][more]
gi|567868869|ref|XP_006427056.1|2.0e-2049.49hypothetical protein CICLE_v10026803mg [Citrus clementina][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0016020 membrane
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG12g07950.1Cp4.1LG12g07950.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR36312FAMILY NOT NAMEDcoord: 88..185
score: 1.2

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG12g07950Cucsa.358920Cucumber (Gy14) v1cgycpeB0936
Cp4.1LG12g07950CmaCh17G008190Cucurbita maxima (Rimu)cmacpeB371
Cp4.1LG12g07950CmaCh08G006800Cucurbita maxima (Rimu)cmacpeB903
Cp4.1LG12g07950CmoCh08G006440Cucurbita moschata (Rifu)cmocpeB839
Cp4.1LG12g07950CmoCh17G007880Cucurbita moschata (Rifu)cmocpeB335
Cp4.1LG12g07950Cla015424Watermelon (97103) v1cpewmB131
Cp4.1LG12g07950Csa7G446640Cucumber (Chinese Long) v2cpecuB161
Cp4.1LG12g07950ClCG09G002220Watermelon (Charleston Gray)cpewcgB126
Cp4.1LG12g07950CSPI07G21190Wild cucumber (PI 183967)cpecpiB163
Cp4.1LG12g07950CsaV3_7G033060Cucumber (Chinese Long) v3cpecucB0188
Cp4.1LG12g07950Bhi09G000097Wax gourdcpewgoB0208
Cp4.1LG12g07950CsGy7G019490Cucumber (Gy14) v2cgybcpeB906
Cp4.1LG12g07950Carg09545Silver-seed gourdcarcpeB1424
Cp4.1LG12g07950Carg18817Silver-seed gourdcarcpeB1049
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG12g07950Cp4.1LG17g05850Cucurbita pepo (Zucchini)cpecpeB157
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG12g07950Cucurbita pepo (Zucchini)cpecpeB178
Cp4.1LG12g07950Cucurbita pepo (Zucchini)cpecpeB181
Cp4.1LG12g07950Cucurbita moschata (Rifu)cmocpeB052
Cp4.1LG12g07950Bottle gourd (USVL1VR-Ls)cpelsiB113
Cp4.1LG12g07950Bottle gourd (USVL1VR-Ls)cpelsiB127
Cp4.1LG12g07950Watermelon (Charleston Gray)cpewcgB148
Cp4.1LG12g07950Melon (DHL92) v3.5.1cpemeB123
Cp4.1LG12g07950Melon (DHL92) v3.6.1cpemedB150
Cp4.1LG12g07950Melon (DHL92) v3.6.1cpemedB159
Cp4.1LG12g07950Silver-seed gourdcarcpeB0209
Cp4.1LG12g07950Silver-seed gourdcarcpeB0280