Cucsa.356670 (gene) Cucumber (Gy14) v1

Overview
NameCucsa.356670
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionBasic leucine zipper and W2 domain-containing protein 2
Locationscaffold03577 : 1531580 .. 1532138 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GTAAGCATTTGAGAATTGGTGGCCGAATTGAAGTTCCGATATGGTGAGAGAGAAGAGCCCTGGCTTAAAGATCCTCTGGGTTTGGACTCTTGGCACTGCCGCCATTCTCGCTACAAGCGTTGTTCGCATGAGATTGAGAGATATGGAGAACACAGTCAACTTCAACTCCGATCAACAACCATCTCTTCACCACCAACAAACTTCTTCCACCGATTCCTTTTCCCTTGACGATGCTGACAAATCACAGGTTTAGAAGCTTTCACGCCTTTTAAATTGAAATTCAGCTTAATCTAGTAATTCTTTCTATTCCAATCTATCATCAAGGAATCTGGTTTTTCTTCAAATCCCATTTTCGGTGGAGTGTACATAATCTGTTTGATAGAATTCCTGAATGGAAAGAACTCCCATATTTTCAGTTGTAATGACCTTGCAATTGCTTTGGATCTTTGATGTTTTAGTTTAAATGAAATGTTTTATGTTTACTGCTACATTTACAAATTAGAAGGTCTGCCTCTAATTTGAAATTGATGGGTGATAATGAGGCTTTATACAACAAGTG

mRNA sequence

GTAAGCATTTGAGAATTGGTGGCCGAATTGAAGTTCCGATATGGTGAGAGAGAAGAGCCCTGGCTTAAAGATCCTCTGGGTTTGGACTCTTGGCACTGCCGCCATTCTCGCTACAAGCGTTGTTCGCATGAGATTGAGAGATATGGAGAACACAGTCAACTTCAACTCCGATCAACAACCATCTCTTCACCACCAACAAACTTCTTCCACCGATTCCTTTTCCCTTGACGATGCTGACAAATCACAGGTTTAGAAGCTTTCACGCCTTTTAAATTGAAATTCAGCTTAATCTAGTAATTCTTTCTATTCCAATCTATCATCAAGGAATCTGGTTTTTCTTCAAATCCCATTTTCGGTGGAGTGTACATAATCTGTTTGATAGAATTCCTGAATGGAAAGAACTCCCATATTTTCAGTTGTAATGACCTTGCAATTGCTTTGGATCTTTGATGTTTTAGTTTAAATGAAATGTTTTATGTTTACTGCTACATTTACAAATTAGAAGGTCTGCCTCTAATTTGAAATTGATGGGTGATAATGAGGCTTTATACAACAAGTG

Coding sequence (CDS)

ATGGTGAGAGAGAAGAGCCCTGGCTTAAAGATCCTCTGGGTTTGGACTCTTGGCACTGCCGCCATTCTCGCTACAAGCGTTGTTCGCATGAGATTGAGAGATATGGAGAACACAGTCAACTTCAACTCCGATCAACAACCATCTCTTCACCACCAACAAACTTCTTCCACCGATTCCTTTTCCCTTGACGATGCTGACAAATCACAGGTTTAG

Protein sequence

MVREKSPGLKILWVWTLGTAAILATSVVRMRLRDMENTVNFNSDQQPSLHHQQTSSTDSFSLDDADKSQV*
Homology
[Close]
BLAST of Cucsa.356670 vs. TrEMBL
Match: A0A0A0LY21_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G656450 PE=4 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 2.2e-30
Identity = 69/70 (98.57%), Postives = 69/70 (98.57%), Query Frame = 1 

Query: 1  MVREKSPGLKILWVWTLGTAAILATSVVRMRLRDMENTVNFNSDQQPSLHHQQTSSTDSF 60
          MVREKSPGLKILWVWTLGTAAILATSVVRMRLRDMENTVNFNSDQQ SLHHQQTSSTDSF
Sbjct: 1  MVREKSPGLKILWVWTLGTAAILATSVVRMRLRDMENTVNFNSDQQQSLHHQQTSSTDSF 60

Query: 61 SLDDADKSQV 71
          SLDDADKSQV
Sbjct: 61 SLDDADKSQV 70

[Close]
BLAST of Cucsa.356670 vs. TrEMBL
Match: M5W1G1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa017610mg PE=4 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 5.9e-12
Identity = 39/62 (62.90%), Postives = 48/62 (77.42%), Query Frame = 1 

Query: 1  MVREKSPGLKILWVWTLGTAAILATSVVRMRLRDMENTVNFNSDQQPSLHHQQTSSTDSF 60
          M RE SPGLKILWVWTLGTAA+L TSVVR R+RDMEN +  N++QQ     Q T++TD+ 
Sbjct: 1  MARELSPGLKILWVWTLGTAAVLVTSVVRTRVRDMENLM--NAEQQQPQQQQDTTATDTD 60

Query: 61 SL 63
          +L
Sbjct: 61 TL 60

[Close]
BLAST of Cucsa.356670 vs. TrEMBL
Match: D7KF99_ARALL (Predicted protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_678215 PE=4 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 1.3e-11
Identity = 38/64 (59.38%), Postives = 48/64 (75.00%), Query Frame = 1 

Query: 1  MVREKSPGLKILWVWTLGTAAILATSVVRMRLRDMENTVNFNSDQQPSLHHQQTSSTDSF 60
          M REKSPGLKILW+WT+GTAAIL TSVVR R++DM++ +N N +Q P   +Q  S+ DS 
Sbjct: 1  MGREKSPGLKILWIWTIGTAAILVTSVVRTRMQDMQSMMNQNQEQAPK-ENQNVSAGDSS 60

Query: 61 SLDD 65
           L D
Sbjct: 61 VLTD 63

[Close]
BLAST of Cucsa.356670 vs. TrEMBL
Match: R0GKQ1_9BRAS (Uncharacterized protein (Fragment) OS=Capsella rubella GN=CARUB_v10010720mg PE=4 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 1.7e-11
Identity = 38/64 (59.38%), Postives = 47/64 (73.44%), Query Frame = 1 

Query: 1  MVREKSPGLKILWVWTLGTAAILATSVVRMRLRDMENTVNFNSDQQPSLHHQQTSSTDSF 60
          M REKSPGLKILWVWT+GTAAIL TSVVR R++DM++ +N N +Q P   +Q   + DS 
Sbjct: 24 MGREKSPGLKILWVWTIGTAAILVTSVVRTRMQDMQSMINQNQEQAPK-QNQNGGAADSS 83

Query: 61 SLDD 65
           L D
Sbjct: 84 VLTD 86

[Close]
BLAST of Cucsa.356670 vs. TrEMBL
Match: Q84R19_ARATH (Putative uncharacterized protein At1g06010 OS=Arabidopsis thaliana GN=At1g06010 PE=2 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 3.8e-11
Identity = 39/64 (60.94%), Postives = 47/64 (73.44%), Query Frame = 1 

Query: 1  MVREKSPGLKILWVWTLGTAAILATSVVRMRLRDMENTVNFNSDQQPSLHHQQTSSTDSF 60
          M REKSPGLKILWVWT+GTAAIL TSVVR R++DM+  +N N +Q P   +Q  S+ DS 
Sbjct: 1  MGREKSPGLKILWVWTIGTAAILVTSVVRTRMQDMQTMMNQNQEQAPK-ENQNGSAGDSS 60

Query: 61 SLDD 65
           L D
Sbjct: 61 VLMD 63

[Close]
BLAST of Cucsa.356670 vs. TAIR10
Match: AT1G06010.1 (AT1G06010.1 unknown protein)

HSP 1 Score: 75.1 bits (183), Expect = 1.9e-14
Identity = 39/64 (60.94%), Postives = 47/64 (73.44%), Query Frame = 1 

Query: 1  MVREKSPGLKILWVWTLGTAAILATSVVRMRLRDMENTVNFNSDQQPSLHHQQTSSTDSF 60
          M REKSPGLKILWVWT+GTAAIL TSVVR R++DM+  +N N +Q P   +Q  S+ DS 
Sbjct: 1  MGREKSPGLKILWVWTIGTAAILVTSVVRTRMQDMQTMMNQNQEQAPK-ENQNGSAGDSS 60

Query: 61 SLDD 65
           L D
Sbjct: 61 VLMD 63

[Close]
BLAST of Cucsa.356670 vs. NCBI nr
Match: gi|778664107|ref|XP_011660223.1| (PREDICTED: uncharacterized protein LOC105436351 [Cucumis sativus])

HSP 1 Score: 139.0 bits (349), Expect = 3.1e-30
Identity = 69/70 (98.57%), Postives = 69/70 (98.57%), Query Frame = 1 

Query: 1  MVREKSPGLKILWVWTLGTAAILATSVVRMRLRDMENTVNFNSDQQPSLHHQQTSSTDSF 60
          MVREKSPGLKILWVWTLGTAAILATSVVRMRLRDMENTVNFNSDQQ SLHHQQTSSTDSF
Sbjct: 1  MVREKSPGLKILWVWTLGTAAILATSVVRMRLRDMENTVNFNSDQQQSLHHQQTSSTDSF 60

Query: 61 SLDDADKSQV 71
          SLDDADKSQV
Sbjct: 61 SLDDADKSQV 70

[Close]
BLAST of Cucsa.356670 vs. NCBI nr
Match: gi|659085942|ref|XP_008443690.1| (PREDICTED: uncharacterized protein LOC103487223 [Cucumis melo])

HSP 1 Score: 134.0 bits (336), Expect = 1.0e-28
Identity = 68/76 (89.47%), Postives = 70/76 (92.11%), Query Frame = 1 

Query: 1  MVREKSPGLKILWVWTLGTAAILATSVVRMRLRDMENTVNFNSDQQPSLHHQQTSST--- 60
          MVREKSPGLKILWVWTLGTAAILATSVVRMRLRDMENT+NFNSDQQPSLHHQQTSST   
Sbjct: 1  MVREKSPGLKILWVWTLGTAAILATSVVRMRLRDMENTINFNSDQQPSLHHQQTSSTDSF 60

Query: 61 ---DSFSLDDADKSQV 71
             DSFS+DDADKSQV
Sbjct: 61 PIPDSFSVDDADKSQV 76

[Close]
BLAST of Cucsa.356670 vs. NCBI nr
Match: gi|645223065|ref|XP_008218451.1| (PREDICTED: uncharacterized protein LOC103318797 [Prunus mume])

HSP 1 Score: 78.6 bits (192), Expect = 5.0e-12
Identity = 37/68 (54.41%), Postives = 46/68 (67.65%), Query Frame = 1 

Query: 1  MVREKSPGLKILWVWTLGTAAILATSVVRMRLRDMENTVNFNSDQQPSLHHQQTSSTDSF 60
          M RE SPGLKILWVWTLGTAA+L TSVVR R+RDMEN +     QQ    H   + T++ 
Sbjct: 1  MARELSPGLKILWVWTLGTAAVLVTSVVRTRVRDMENLMKAEQQQQQQQQHNTATDTETL 60

Query: 61 SLDDADKS 69
           +D + +S
Sbjct: 61 LVDTSPQS 68

[Close]
BLAST of Cucsa.356670 vs. NCBI nr
Match: gi|727570384|ref|XP_010457712.1| (PREDICTED: uncharacterized protein LOC104739148 isoform X2 [Camelina sativa])

HSP 1 Score: 77.8 bits (190), Expect = 8.5e-12
Identity = 39/64 (60.94%), Postives = 48/64 (75.00%), Query Frame = 1 

Query: 1  MVREKSPGLKILWVWTLGTAAILATSVVRMRLRDMENTVNFNSDQQPSLHHQQTSSTDSF 60
          M REKSPGLKILWVWT+GTAAIL TSVVR R++DM+  +N N +Q P   +Q  S+ DS 
Sbjct: 27 MGREKSPGLKILWVWTIGTAAILVTSVVRTRMQDMQTMMNQNQEQAPK-RNQNASAGDSS 86

Query: 61 SLDD 65
          +L D
Sbjct: 87 ALTD 89

[Close]
BLAST of Cucsa.356670 vs. NCBI nr
Match: gi|595831807|ref|XP_007206345.1| (hypothetical protein PRUPE_ppa017610mg [Prunus persica])

HSP 1 Score: 77.8 bits (190), Expect = 8.5e-12
Identity = 39/62 (62.90%), Postives = 48/62 (77.42%), Query Frame = 1 

Query: 1  MVREKSPGLKILWVWTLGTAAILATSVVRMRLRDMENTVNFNSDQQPSLHHQQTSSTDSF 60
          M RE SPGLKILWVWTLGTAA+L TSVVR R+RDMEN +  N++QQ     Q T++TD+ 
Sbjct: 1  MARELSPGLKILWVWTLGTAAVLVTSVVRTRVRDMENLM--NAEQQQPQQQQDTTATDTD 60

Query: 61 SL 63
          +L
Sbjct: 61 TL 60

The following BLAST results are available for this feature:
BLAST of Cucsa.356670 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LY21_CUCSA2.2e-3098.57Uncharacterized protein OS=Cucumis sativus GN=Csa_1G656450 PE=4 SV=1[more]
M5W1G1_PRUPE5.9e-1262.90Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa017610mg PE=4 SV=1[more]
D7KF99_ARALL1.3e-1159.38Predicted protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_678215 PE=4 ... [more]
R0GKQ1_9BRAS1.7e-1159.38Uncharacterized protein (Fragment) OS=Capsella rubella GN=CARUB_v10010720mg PE=4... [more]
Q84R19_ARATH3.8e-1160.94Putative uncharacterized protein At1g06010 OS=Arabidopsis thaliana GN=At1g06010 ... [more]
BLAST of Cucsa.356670 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G06010.11.9e-1460.94 unknown protein[more]
BLAST of Cucsa.356670 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778664107|ref|XP_011660223.1|3.1e-3098.57PREDICTED: uncharacterized protein LOC105436351 [Cucumis sativus][more]
gi|659085942|ref|XP_008443690.1|1.0e-2889.47PREDICTED: uncharacterized protein LOC103487223 [Cucumis melo][more]
gi|645223065|ref|XP_008218451.1|5.0e-1254.41PREDICTED: uncharacterized protein LOC103318797 [Prunus mume][more]
gi|727570384|ref|XP_010457712.1|8.5e-1260.94PREDICTED: uncharacterized protein LOC104739148 isoform X2 [Camelina sativa][more]
gi|595831807|ref|XP_007206345.1|8.5e-1262.90hypothetical protein PRUPE_ppa017610mg [Prunus persica][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.356670.1Cucsa.356670.1mRNA