Cp4.1LG00g01500 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG00g01500
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionBasic leucine zipper and W2 domain-containing protein 2
LocationCp4.1LG00 : 3817151 .. 3817363 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGAGAGAGAAGAGCCCTGGCCTAAAGATCCTCTGGGTTTGGACTCTTGGCACCGCCGCCATTCTCGTTACAAGCGTAGCTCGGATGAGAATGAGGGATATGGAGAGTATTATCAAGTCCGATCAACAACAATCGATGCATCAGCAGCGACAAACGACGTCTTCCACCGGTTCGTTTTTCGTTGGCGAAGGTGAAACATCTGAGAATTAG

mRNA sequence

ATGGCGAGAGAGAAGAGCCCTGGCCTAAAGATCCTCTGGGTTTGGACTCTTGGCACCGCCGCCATTCTCGTTACAAGCGTAGCTCGGATGAGAATGAGGGATATGGAGAGTATTATCAAGTCCGATCAACAACAATCGATGCATCAGCAGCGACAAACGACGTCTTCCACCGGTTCGTTTTTCGTTGGCGAAGGTGAAACATCTGAGAATTAG

Coding sequence (CDS)

ATGGCGAGAGAGAAGAGCCCTGGCCTAAAGATCCTCTGGGTTTGGACTCTTGGCACCGCCGCCATTCTCGTTACAAGCGTAGCTCGGATGAGAATGAGGGATATGGAGAGTATTATCAAGTCCGATCAACAACAATCGATGCATCAGCAGCGACAAACGACGTCTTCCACCGGTTCGTTTTTCGTTGGCGAAGGTGAAACATCTGAGAATTAG

Protein sequence

MAREKSPGLKILWVWTLGTAAILVTSVARMRMRDMESIIKSDQQQSMHQQRQTTSSTGSFFVGEGETSEN
Homology
[Close]
BLAST of Cp4.1LG00g01500 vs. TrEMBL
Match: A0A0A0LY21_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G656450 PE=4 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 2.1e-14
Identity = 47/71 (66.20%), Postives = 56/71 (78.87%), Query Frame = 1 

Query: 1  MAREKSPGLKILWVWTLGTAAILVTSVARMRMRDMESII--KSDQQQSMHQQRQTTSSTG 60
          M REKSPGLKILWVWTLGTAAIL TSV RMR+RDME+ +   SDQQQS+H Q+  TSST 
Sbjct: 1  MVREKSPGLKILWVWTLGTAAILATSVVRMRLRDMENTVNFNSDQQQSLHHQQ--TSSTD 60

Query: 61 SFFVGEGETSE 70
          SF + + + S+
Sbjct: 61 SFSLDDADKSQ 69

[Close]
BLAST of Cp4.1LG00g01500 vs. TrEMBL
Match: M5W1G1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa017610mg PE=4 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 2.6e-12
Identity = 39/62 (62.90%), Postives = 48/62 (77.42%), Query Frame = 1 

Query: 1  MAREKSPGLKILWVWTLGTAAILVTSVARMRMRDMESIIKSDQQQSMHQQRQTTSSTGSF 60
          MARE SPGLKILWVWTLGTAA+LVTSV R R+RDME+++ ++QQQ   QQ  T + T + 
Sbjct: 1  MARELSPGLKILWVWTLGTAAVLVTSVVRTRVRDMENLMNAEQQQPQQQQDTTATDTDTL 60

Query: 61 FV 63
           V
Sbjct: 61 LV 62

[Close]
BLAST of Cp4.1LG00g01500 vs. TrEMBL
Match: R0GKQ1_9BRAS (Uncharacterized protein (Fragment) OS=Capsella rubella GN=CARUB_v10010720mg PE=4 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 1.4e-10
Identity = 37/64 (57.81%), Postives = 47/64 (73.44%), Query Frame = 1 

Query: 1  MAREKSPGLKILWVWTLGTAAILVTSVARMRMRDMESIIKSDQQQSMHQQRQTTSSTGSF 60
          M REKSPGLKILWVWT+GTAAILVTSV R RM+DM+S+I  +Q+Q+  Q +   ++  S 
Sbjct: 24 MGREKSPGLKILWVWTIGTAAILVTSVVRTRMQDMQSMINQNQEQAPKQNQNGGAADSSV 83

Query: 61 FVGE 65
             E
Sbjct: 84 LTDE 87

[Close]
BLAST of Cp4.1LG00g01500 vs. TrEMBL
Match: B9I4F2_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0012s13860g PE=4 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 3.2e-10
Identity = 34/56 (60.71%), Postives = 44/56 (78.57%), Query Frame = 1 

Query: 1  MAREKSPGLKILWVWTLGTAAILVTSVARMRMRDMESIIKSDQQQSMHQQRQTTSS 57
          M RE SPGLKILW WT+GTAAILVTSV R R++DME ++ ++QQQ   Q++Q  S+
Sbjct: 1  MTRETSPGLKILWAWTIGTAAILVTSVVRTRLKDMEQMMNAEQQQQQEQEKQHQST 56

[Close]
BLAST of Cp4.1LG00g01500 vs. TrEMBL
Match: D7KF99_ARALL (Predicted protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_678215 PE=4 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 3.2e-10
Identity = 34/64 (53.12%), Postives = 47/64 (73.44%), Query Frame = 1 

Query: 1  MAREKSPGLKILWVWTLGTAAILVTSVARMRMRDMESIIKSDQQQSMHQQRQTTSSTGSF 60
          M REKSPGLKILW+WT+GTAAILVTSV R RM+DM+S++  +Q+Q+  + +  ++   S 
Sbjct: 1  MGREKSPGLKILWIWTIGTAAILVTSVVRTRMQDMQSMMNQNQEQAPKENQNVSAGDSSV 60

Query: 61 FVGE 65
             E
Sbjct: 61 LTDE 64

[Close]
BLAST of Cp4.1LG00g01500 vs. TAIR10
Match: AT1G06010.1 (AT1G06010.1 unknown protein)

HSP 1 Score: 70.9 bits (172), Expect = 3.6e-13
Identity = 34/64 (53.12%), Postives = 48/64 (75.00%), Query Frame = 1 

Query: 1  MAREKSPGLKILWVWTLGTAAILVTSVARMRMRDMESIIKSDQQQSMHQQRQTTSSTGSF 60
          M REKSPGLKILWVWT+GTAAILVTSV R RM+DM++++  +Q+Q+  + +  ++   S 
Sbjct: 1  MGREKSPGLKILWVWTIGTAAILVTSVVRTRMQDMQTMMNQNQEQAPKENQNGSAGDSSV 60

Query: 61 FVGE 65
           + E
Sbjct: 61 LMDE 64

[Close]
BLAST of Cp4.1LG00g01500 vs. NCBI nr
Match: gi|778664107|ref|XP_011660223.1| (PREDICTED: uncharacterized protein LOC105436351 [Cucumis sativus])

HSP 1 Score: 85.9 bits (211), Expect = 3.1e-14
Identity = 47/71 (66.20%), Postives = 56/71 (78.87%), Query Frame = 1 

Query: 1  MAREKSPGLKILWVWTLGTAAILVTSVARMRMRDMESII--KSDQQQSMHQQRQTTSSTG 60
          M REKSPGLKILWVWTLGTAAIL TSV RMR+RDME+ +   SDQQQS+H Q+  TSST 
Sbjct: 1  MVREKSPGLKILWVWTLGTAAILATSVVRMRLRDMENTVNFNSDQQQSLHHQQ--TSSTD 60

Query: 61 SFFVGEGETSE 70
          SF + + + S+
Sbjct: 61 SFSLDDADKSQ 69

[Close]
BLAST of Cp4.1LG00g01500 vs. NCBI nr
Match: gi|645223065|ref|XP_008218451.1| (PREDICTED: uncharacterized protein LOC103318797 [Prunus mume])

HSP 1 Score: 82.0 bits (201), Expect = 4.5e-13
Identity = 40/62 (64.52%), Postives = 49/62 (79.03%), Query Frame = 1 

Query: 1  MAREKSPGLKILWVWTLGTAAILVTSVARMRMRDMESIIKSDQQQSMHQQRQTTSSTGSF 60
          MARE SPGLKILWVWTLGTAA+LVTSV R R+RDME+++K++QQQ   QQ  T + T + 
Sbjct: 1  MARELSPGLKILWVWTLGTAAVLVTSVVRTRVRDMENLMKAEQQQQQQQQHNTATDTETL 60

Query: 61 FV 63
           V
Sbjct: 61 LV 62

[Close]
BLAST of Cp4.1LG00g01500 vs. NCBI nr
Match: gi|659085942|ref|XP_008443690.1| (PREDICTED: uncharacterized protein LOC103487223 [Cucumis melo])

HSP 1 Score: 82.0 bits (201), Expect = 4.5e-13
Identity = 46/62 (74.19%), Postives = 50/62 (80.65%), Query Frame = 1 

Query: 1  MAREKSPGLKILWVWTLGTAAILVTSVARMRMRDMESII--KSDQQQSMHQQRQTTSSTG 60
          M REKSPGLKILWVWTLGTAAIL TSV RMR+RDME+ I   SDQQ S+H Q+  TSST 
Sbjct: 1  MVREKSPGLKILWVWTLGTAAILATSVVRMRLRDMENTINFNSDQQPSLHHQQ--TSSTD 60

[Close]
BLAST of Cp4.1LG00g01500 vs. NCBI nr
Match: gi|595831807|ref|XP_007206345.1| (hypothetical protein PRUPE_ppa017610mg [Prunus persica])

HSP 1 Score: 79.0 bits (193), Expect = 3.8e-12
Identity = 39/62 (62.90%), Postives = 48/62 (77.42%), Query Frame = 1 

Query: 1  MAREKSPGLKILWVWTLGTAAILVTSVARMRMRDMESIIKSDQQQSMHQQRQTTSSTGSF 60
          MARE SPGLKILWVWTLGTAA+LVTSV R R+RDME+++ ++QQQ   QQ  T + T + 
Sbjct: 1  MARELSPGLKILWVWTLGTAAVLVTSVVRTRVRDMENLMNAEQQQPQQQQDTTATDTDTL 60

Query: 61 FV 63
           V
Sbjct: 61 LV 62

[Close]
BLAST of Cp4.1LG00g01500 vs. NCBI nr
Match: gi|565491638|ref|XP_006303458.1| (hypothetical protein CARUB_v10010720mg, partial [Capsella rubella])

HSP 1 Score: 73.2 bits (178), Expect = 2.1e-10
Identity = 37/64 (57.81%), Postives = 47/64 (73.44%), Query Frame = 1 

Query: 1  MAREKSPGLKILWVWTLGTAAILVTSVARMRMRDMESIIKSDQQQSMHQQRQTTSSTGSF 60
          M REKSPGLKILWVWT+GTAAILVTSV R RM+DM+S+I  +Q+Q+  Q +   ++  S 
Sbjct: 24 MGREKSPGLKILWVWTIGTAAILVTSVVRTRMQDMQSMINQNQEQAPKQNQNGGAADSSV 83

Query: 61 FVGE 65
             E
Sbjct: 84 LTDE 87

The following BLAST results are available for this feature:
BLAST of Cp4.1LG00g01500 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG00g01500 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LY21_CUCSA2.1e-1466.20Uncharacterized protein OS=Cucumis sativus GN=Csa_1G656450 PE=4 SV=1[more]
M5W1G1_PRUPE2.6e-1262.90Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa017610mg PE=4 SV=1[more]
R0GKQ1_9BRAS1.4e-1057.81Uncharacterized protein (Fragment) OS=Capsella rubella GN=CARUB_v10010720mg PE=4... [more]
B9I4F2_POPTR3.2e-1060.71Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0012s13860g PE=4 SV=1[more]
D7KF99_ARALL3.2e-1053.13Predicted protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_678215 PE=4 ... [more]
BLAST of Cp4.1LG00g01500 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G06010.13.6e-1353.13 unknown protein[more]
BLAST of Cp4.1LG00g01500 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778664107|ref|XP_011660223.1|3.1e-1466.20PREDICTED: uncharacterized protein LOC105436351 [Cucumis sativus][more]
gi|645223065|ref|XP_008218451.1|4.5e-1364.52PREDICTED: uncharacterized protein LOC103318797 [Prunus mume][more]
gi|659085942|ref|XP_008443690.1|4.5e-1374.19PREDICTED: uncharacterized protein LOC103487223 [Cucumis melo][more]
gi|595831807|ref|XP_007206345.1|3.8e-1262.90hypothetical protein PRUPE_ppa017610mg [Prunus persica][more]
gi|565491638|ref|XP_006303458.1|2.1e-1057.81hypothetical protein CARUB_v10010720mg, partial [Capsella rubella][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG00g01500.1Cp4.1LG00g01500.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG00g01500Cucsa.356670Cucumber (Gy14) v1cgycpeB0927
Cp4.1LG00g01500CmaCh10G008360Cucurbita maxima (Rimu)cmacpeB070
Cp4.1LG00g01500CmaCh11G009330Cucurbita maxima (Rimu)cmacpeB103
Cp4.1LG00g01500Cla009548Watermelon (97103) v1cpewmB006
Cp4.1LG00g01500Csa1G656450Cucumber (Chinese Long) v2cpecuB000
Cp4.1LG00g01500MELO3C010052Melon (DHL92) v3.5.1cpemeB007
Cp4.1LG00g01500ClCG03G010640Watermelon (Charleston Gray)cpewcgB012
Cp4.1LG00g01500CSPI01G32290Wild cucumber (PI 183967)cpecpiB000
Cp4.1LG00g01500Lsi06G006920Bottle gourd (USVL1VR-Ls)cpelsiB017
Cp4.1LG00g01500MELO3C010052.2Melon (DHL92) v3.6.1cpemedB008
Cp4.1LG00g01500CsaV3_1G044490Cucumber (Chinese Long) v3cpecucB0000
Cp4.1LG00g01500CsGy1G031200Cucumber (Gy14) v2cgybcpeB002
Cp4.1LG00g01500Carg22723Silver-seed gourdcarcpeB0756
Cp4.1LG00g01500Carg17798Silver-seed gourdcarcpeB1340
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG00g01500Cp4.1LG18g02590Cucurbita pepo (Zucchini)cpecpeB006
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG00g01500Wax gourdcpewgoB0018
Cp4.1LG00g01500Wax gourdcpewgoB0019
Cp4.1LG00g01500Cucurbita moschata (Rifu)cmocpeB042
Cp4.1LG00g01500Cucurbita moschata (Rifu)cmocpeB079