Cla97C03G061250 (gene) Watermelon (97103) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla97C03G061250
Type	gene
Organism	Citrullus lanatus (Watermelon (97103) v2)
Description	Basic leucine zipper/W2 domain protein
Location	Cla97Chr03 : 18174851 .. 18176884 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGAGAGAGAAGAGCCCTGGCTTAAAGATCCTCTGGGTTTGGACTCTTGGCACCGCCGCCATTCTCGTGACAACCGTTGCTCGGATGAGAATGAGGGATATGGAGAACATAACCAACTCCGATCAACAACCATCGCACAACCACCAACAAACGTCTTCCACCGATTCCTTTCCCATTACCGATTCGTTTTCCGTCGATGAAGGAGACGCATCACAGGTTTAGAAGCTTTCGCGCCTTTGAAATTCAGCTTAAACTAGTAATTTTTCTTTTCCAATTTAGCACTGGGAATCTGGGTTTTCGTCAAATCTCATTTTCGGTCGACTGTACATAATGTGTTTGATAAAATTCCTGAATGGAAGGAACTGCCATATTTTCACTCGTAATGAGCTTGCACTTGCTTTGGATCTTTGATGTGTCAGTTTTAATGAAGTGTTTTATGTTTGCTGCTGCATTTGCCTGGATGTATAAATTAGAAGGTCTGCCTCTTAGTTGAATTTGGTAGGTAATGAATGAGACAGTTCCTTAGGATGGGATTCATGTTTCATTTTTCAACGGCACTTTGTTTTCAGTAACCCTCTTTCTAAAGTTTTGTGTGGATCCTTTCAAAGTCCTTATTTAGTTTCTTATTGACCTGGTGCTCCACTCCTTCCAATTCTCATAGAAACTTTTGTTGGTCAAATAGTTTTGTGTGGTTTTGAAATTCACTAAAGTGGGGTAGTTTTTGTCTAATATTAGAACATGTATCACATAAAAATGTGTGTTGTGAGTAAAAGGCGCAAGCCAAAAATGATAACAAAATGAAAATAAAATAAAATAAAATAAAATAAATCAATGATCTTAACAACGAATGCTAGATTGTTCCATTTAGATTAATTTCAGTCCGTTTGGTTAGCTTTGTTTTCAAAAAATCATCTCATTGGTGTTTTATTTTTCCTAAATGAATAGATTGATTTATGGGAAGTCTTTATTTTGGTATGTTGCTGAGGATGCAAATGTTGTTCACTATGAGCACGAGTTGAGGTTGCACAACTTGGCTCTTTTATAAGCCTTAAGATCAAGTTGAATGCCTATATGATTATGTTCCTCCTTTGCTTGGTGATGAAACTCCAGGAGAGTAATAAAAAAGCTCTAATAGGTTGGAACCAGAATTATTACGTTCATGAAATGTCTGATATTTTAGGTACAGATTGCAATGGATTTGATGGTATGCACATATCGAACTTATATTTTACGATGTTCTTGAATAGGATCTGTCTTCTTAACAACAAATTCGCTTCCTACATTCTTTTGAATGTCAAACACAAAACTGTTGTCTTGTGTAATTACTGCAAATGATAGCATGTTGAAAGGCATTGATGCCTTTTGGCTTATATGCAAGGGATTCATCATCCACGAGAATTCAAAAGTTGAAAAGACAATAGGAATGACAAGCAATGCTTATATGTACCACATATTCTCGAAGGATTAACTTGTATAATCATTTGATGTTGTTTACCAGATATGTTGCTATAATCAGCATATCATTTAATTTTATGTTGGTTTGGGATGAATTTCCAGAATGTTATCTCGCTGAGCATTCCACCCATGTAGAAATATGTTGGAGAGGTTTATTAAAACACTATTGTCAATTGAACTTTCTGCTTTTGTAGTTAACTGATGATTGATAGATTTGGAAACGCAGATGTTATGCTGGCTTAAGAAACTTTGACCATCAATTAGGGATTTAATTGTATAGTAATTATGTGTTTACAGAAACAAAATACTGTTTTTAGTTGTCTACCAACAACTTGAAATGAATAATGTGCATGAGACTGAAGTTGTTATACAGTTGACTGATAGATGTTACATTCACCCTTTAGGAGTAGTGGACGACATCTTATTAAAATTTTGTCGATCTTCGTACACATGTACTTAGGTGGTCTCGACGCATTGACTGTTATAATATGTAAGGAGCTGTCATCTGAACACGAAGAAAATCTGGTTCAAACATTGAAAGGAGTACAAGTTGGCCATCAAGTGAATATTGGTTGA

mRNA sequence

ATGGTGAGAGAGAAGAGCCCTGGCTTAAAGATCCTCTGGGTTTGGACTCTTGGCACCGCCGCCATTCTCGTGACAACCGTTGCTCGGATGAGAATGAGGGATATGGAGAACATAACCAACTCCGATCAACAACCATCGCACAACCACCAACAAACGTCTTCCACCGATTCCTTTCCCATTACCGATTCGTTTTCCGTCGATGAAGGAGACGCATCACAGGAGAGTAATAAAAAAGCTCTAATAGGTTGGAACCAGAATTATTACGTTCATGAAATGTCTGATATTTTAGGTACAGATTGCAATGGATTTGATGGTGGTCTCGACGCATTGACTGTTATAATATGTAAGGAGCTGTCATCTGAACACGAAGAAAATCTGGTTCAAACATTGAAAGGAGTACAAGTTGGCCATCAAGTGAATATTGGTTGA

Coding sequence (CDS)

ATGGTGAGAGAGAAGAGCCCTGGCTTAAAGATCCTCTGGGTTTGGACTCTTGGCACCGCCGCCATTCTCGTGACAACCGTTGCTCGGATGAGAATGAGGGATATGGAGAACATAACCAACTCCGATCAACAACCATCGCACAACCACCAACAAACGTCTTCCACCGATTCCTTTCCCATTACCGATTCGTTTTCCGTCGATGAAGGAGACGCATCACAGGAGAGTAATAAAAAAGCTCTAATAGGTTGGAACCAGAATTATTACGTTCATGAAATGTCTGATATTTTAGGTACAGATTGCAATGGATTTGATGGTGGTCTCGACGCATTGACTGTTATAATATGTAAGGAGCTGTCATCTGAACACGAAGAAAATCTGGTTCAAACATTGAAAGGAGTACAAGTTGGCCATCAAGTGAATATTGGTTGA

Protein sequence

MVREKSPGLKILWVWTLGTAAILVTTVARMRMRDMENITNSDQQPSHNHQQTSSTDSFPITDSFSVDEGDASQESNKKALIGWNQNYYVHEMSDILGTDCNGFDGGLDALTVIICKELSSEHEENLVQTLKGVQVGHQVNIG

Homology

[Close]

BLAST of Cla97C03G061250 vs. NCBI nr
Match: XP_008443690.1 (PREDICTED: uncharacterized protein LOC103487223 [Cucumis melo])

HSP 1 Score: 115.5 bits (288), Expect = 1.4e-22
Identity = 61/75 (81.33%), Postives = 65/75 (86.67%), Query Frame = 0


Query: 1  MVREKSPGLKILWVWTLGTAAILVTTVARMRMRDMENIT--NSDQQPSHNHQQTSSTDSF 60
          MVREKSPGLKILWVWTLGTAAIL T+V RMR+RDMEN    NSDQQPS +HQQTSSTDSF
Sbjct: 1  MVREKSPGLKILWVWTLGTAAILATSVVRMRLRDMENTINFNSDQQPSLHHQQTSSTDSF 60

Query: 61 PITDSFSVDEGDASQ 74
          PI DSFSVD+ D SQ
Sbjct: 61 PIPDSFSVDDADKSQ 75

[Close]

BLAST of Cla97C03G061250 vs. NCBI nr
Match: XP_023516467.1 (uncharacterized protein LOC111780326 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 108.6 bits (270), Expect = 1.8e-20
Identity = 58/73 (79.45%), Postives = 63/73 (86.30%), Query Frame = 0


Query: 1  MVREKSPGLKILWVWTLGTAAILVTTVARMRMRDMENITNSDQQPSHNHQQTSSTDSFPI 60
          M R+KSPG+KILWVWTLGTAAILVT+VAR RMRDMEN+ NSDQQPS +HQQTSS      
Sbjct: 1  MARQKSPGVKILWVWTLGTAAILVTSVARRRMRDMENMINSDQQPSLHHQQTSS------ 60

Query: 61 TDSFSVDEGDASQ 74
          TDSFSVDEGDASQ
Sbjct: 61 TDSFSVDEGDASQ 67

[Close]

BLAST of Cla97C03G061250 vs. NCBI nr
Match: XP_022987500.1 (uncharacterized protein LOC111485045 [Cucurbita maxima])

HSP 1 Score: 107.1 bits (266), Expect = 5.1e-20
Identity = 57/73 (78.08%), Postives = 62/73 (84.93%), Query Frame = 0


Query: 1  MVREKSPGLKILWVWTLGTAAILVTTVARMRMRDMENITNSDQQPSHNHQQTSSTDSFPI 60
          M R+KSPG+KILWVWTLGTAAILVT+VAR RMRDMEN+ NSDQQPS +HQQTSS      
Sbjct: 1  MARQKSPGVKILWVWTLGTAAILVTSVARRRMRDMENMINSDQQPSLHHQQTSS------ 60

Query: 61 TDSFSVDEGDASQ 74
          TDSFSVDEGD SQ
Sbjct: 61 TDSFSVDEGDVSQ 67

[Close]

BLAST of Cla97C03G061250 vs. NCBI nr
Match: XP_011660223.1 (PREDICTED: uncharacterized protein LOC105436351 [Cucumis sativus] >KGN66668.1 hypothetical protein Csa_1G656450 [Cucumis sativus])

HSP 1 Score: 95.5 bits (236), Expect = 1.5e-16
Identity = 54/75 (72.00%), Postives = 59/75 (78.67%), Query Frame = 0


Query: 1  MVREKSPGLKILWVWTLGTAAILVTTVARMRMRDMENIT--NSDQQPSHNHQQTSSTDSF 60
          MVREKSPGLKILWVWTLGTAAIL T+V RMR+RDMEN    NSDQQ S +HQQTSS    
Sbjct: 1  MVREKSPGLKILWVWTLGTAAILATSVVRMRLRDMENTVNFNSDQQQSLHHQQTSS---- 60

Query: 61 PITDSFSVDEGDASQ 74
            TDSFS+D+ D SQ
Sbjct: 61 --TDSFSLDDADKSQ 69

[Close]

BLAST of Cla97C03G061250 vs. NCBI nr
Match: XP_022933307.1 (uncharacterized protein LOC111440489 [Cucurbita moschata])

HSP 1 Score: 91.3 bits (225), Expect = 2.9e-15
Identity = 50/73 (68.49%), Postives = 56/73 (76.71%), Query Frame = 0


Query: 1  MVREKSPGLKILWVWTLGTAAILVTTVARMRMRDMENITNSDQQPSHNHQQTSSTDSFPI 60
          M REKSPGLKILWVWTLGTAAILVT+VARMRMRDME+I  SDQQ    HQQ  ++     
Sbjct: 1  MAREKSPGLKILWVWTLGTAAILVTSVARMRMRDMESIIKSDQQQQSMHQQRQTSS---- 60

Query: 61 TDSFSVDEGDASQ 74
          TDSF V EG+ S+
Sbjct: 61 TDSFFVGEGETSE 69

[Close]

BLAST of Cla97C03G061250 vs. TrEMBL
Match: tr|A0A1S3B9D1|A0A1S3B9D1_CUCME (uncharacterized protein LOC103487223 OS=Cucumis melo OX=3656 GN=LOC103487223 PE=4 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 9.5e-23
Identity = 61/75 (81.33%), Postives = 65/75 (86.67%), Query Frame = 0


Query: 1  MVREKSPGLKILWVWTLGTAAILVTTVARMRMRDMENIT--NSDQQPSHNHQQTSSTDSF 60
          MVREKSPGLKILWVWTLGTAAIL T+V RMR+RDMEN    NSDQQPS +HQQTSSTDSF
Sbjct: 1  MVREKSPGLKILWVWTLGTAAILATSVVRMRLRDMENTINFNSDQQPSLHHQQTSSTDSF 60

Query: 61 PITDSFSVDEGDASQ 74
          PI DSFSVD+ D SQ
Sbjct: 61 PIPDSFSVDDADKSQ 75

[Close]

BLAST of Cla97C03G061250 vs. TrEMBL
Match: tr|A0A0A0LY21|A0A0A0LY21_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G656450 PE=4 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 1.0e-16
Identity = 54/75 (72.00%), Postives = 59/75 (78.67%), Query Frame = 0


Query: 1  MVREKSPGLKILWVWTLGTAAILVTTVARMRMRDMENIT--NSDQQPSHNHQQTSSTDSF 60
          MVREKSPGLKILWVWTLGTAAIL T+V RMR+RDMEN    NSDQQ S +HQQTSS    
Sbjct: 1  MVREKSPGLKILWVWTLGTAAILATSVVRMRLRDMENTVNFNSDQQQSLHHQQTSS---- 60

Query: 61 PITDSFSVDEGDASQ 74
            TDSFS+D+ D SQ
Sbjct: 61 --TDSFSLDDADKSQ 69

[Close]

BLAST of Cla97C03G061250 vs. TrEMBL
Match: tr|A0A1J3EGL9|A0A1J3EGL9_NOCCA (Uncharacterized protein OS=Noccaea caerulescens OX=107243 GN=GA_TR2086_c0_g1_i1_g.6809 PE=4 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 8.9e-13
Identity = 44/70 (62.86%), Postives = 52/70 (74.29%), Query Frame = 0


Query: 1  MVREKSPGLKILWVWTLGTAAILVTTVARMRMRDMENITNSDQQPSHNHQQTSSTDSFPI 60
          M REKSPGLKILWVWTLGTAAILVT+V R RM+DME++ N +Q P  NH  TS+ DS  +
Sbjct: 1  MGREKSPGLKILWVWTLGTAAILVTSVVRTRMQDMESMMNQEQAPKQNH-NTSAGDSVVL 60

Query: 61 TDSFSVDEGD 71
          TD   + E D
Sbjct: 61 TDQTVLPESD 69

[Close]

BLAST of Cla97C03G061250 vs. TrEMBL
Match: tr|A0A1J3HQP7|A0A1J3HQP7_NOCCA (Uncharacterized protein OS=Noccaea caerulescens OX=107243 GN=LC_TR5076_c0_g1_i1_g.17777 PE=4 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 1.3e-11
Identity = 44/70 (62.86%), Postives = 52/70 (74.29%), Query Frame = 0


Query: 1  MVREKSPGLKILWVWTLGTAAILVTTVARMRMRDMENITNSDQQPSHNHQQTSSTDSFPI 60
          M REKSPGLKILWVWTLGTAAILVT+V R RM+DME++ N +Q P  NH  TS+ DS  +
Sbjct: 1  MGREKSPGLKILWVWTLGTAAILVTSVVRTRMQDMESMMNQEQAPKQNH-NTSAGDSV-L 60

Query: 61 TDSFSVDEGD 71
          TD   + E D
Sbjct: 61 TDQTVLPESD 68

[Close]

BLAST of Cla97C03G061250 vs. TrEMBL
Match: tr|A0A2C9USH9|A0A2C9USH9_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_12G005400 PE=4 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 3.7e-11
Identity = 44/74 (59.46%), Postives = 51/74 (68.92%), Query Frame = 0


Query: 1  MVREKSPGLKILWVWTLGTAAILVTTVARMRMRDMENITNSDQQPSHNHQQTSSTDSFPI 60
          M REKSPGLKILW+WT+GTAAILVTTV R R+RDME + N++QQ     QQT ST    +
Sbjct: 1  MPREKSPGLKILWLWTIGTAAILVTTVVRTRLRDMEQLMNAEQQ----QQQTQST----L 60

Query: 61 TDSFSVDEGDASQE 75
           DS  VD     QE
Sbjct: 61 RDSLIVDSSPEPQE 66

[Close]

BLAST of Cla97C03G061250 vs. TAIR10
Match: AT1G06010.1 (unknown protein)

HSP 1 Score: 69.3 bits (168), Expect = 2.1e-12
Identity = 39/71 (54.93%), Postives = 49/71 (69.01%), Query Frame = 0


Query: 1  MVREKSPGLKILWVWTLGTAAILVTTVARMRMRDMENITNSDQ-QPSHNHQQTSSTDSFP 60
          M REKSPGLKILWVWT+GTAAILVT+V R RM+DM+ + N +Q Q    +Q  S+ DS  
Sbjct: 1  MGREKSPGLKILWVWTIGTAAILVTSVVRTRMQDMQTMMNQNQEQAPKENQNGSAGDSSV 60

Query: 61 ITDSFSVDEGD 71
          + D   + E D
Sbjct: 61 LMDETVLPESD 71

The following BLAST results are available for this feature:

BLAST of Cla97C03G061250 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008443690.1	1.4e-22	81.33	PREDICTED: uncharacterized protein LOC103487223 [Cucumis melo]	[more]
XP_023516467.1	1.8e-20	79.45	uncharacterized protein LOC111780326 [Cucurbita pepo subsp. pepo]	[more]
XP_022987500.1	5.1e-20	78.08	uncharacterized protein LOC111485045 [Cucurbita maxima]	[more]
XP_011660223.1	1.5e-16	72.00	PREDICTED: uncharacterized protein LOC105436351 [Cucumis sativus] >KGN66668.1 hy...	[more]
XP_022933307.1	2.9e-15	68.49	uncharacterized protein LOC111440489 [Cucurbita moschata]	[more]

BLAST of Cla97C03G061250 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3B9D1\|A0A1S3B9D1_CUCME	9.5e-23	81.33	uncharacterized protein LOC103487223 OS=Cucumis melo OX=3656 GN=LOC103487223 PE=...	[more]
tr\|A0A0A0LY21\|A0A0A0LY21_CUCSA	1.0e-16	72.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G656450 PE=4 SV=1	[more]
tr\|A0A1J3EGL9\|A0A1J3EGL9_NOCCA	8.9e-13	62.86	Uncharacterized protein OS=Noccaea caerulescens OX=107243 GN=GA_TR2086_c0_g1_i1_...	[more]
tr\|A0A1J3HQP7\|A0A1J3HQP7_NOCCA	1.3e-11	62.86	Uncharacterized protein OS=Noccaea caerulescens OX=107243 GN=LC_TR5076_c0_g1_i1_...	[more]
tr\|A0A2C9USH9\|A0A2C9USH9_MANES	3.7e-11	59.46	Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_12G005400 PE=4 SV=...	[more]

BLAST of Cla97C03G061250 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Cla97C03G061250 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G06010.1	2.1e-12	54.93	unknown protein	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0016020	membrane
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C03G061250.1	Cla97C03G061250.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 38..70
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 38..75

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla97C03G061250	Cla009548	Watermelon (97103) v1	wmwmbB126
Cla97C03G061250	Csa1G656450	Cucumber (Chinese Long) v2	cuwmbB035
Cla97C03G061250	MELO3C010052	Melon (DHL92) v3.5.1	mewmbB244
Cla97C03G061250	ClCG03G010640	Watermelon (Charleston Gray)	wcgwmbB186
Cla97C03G061250	CSPI01G32290	Wild cucumber (PI 183967)	cpiwmbB035
Cla97C03G061250	Cucsa.356670	Cucumber (Gy14) v1	cgywmbB608
Cla97C03G061250	CmaCh11G009330	Cucurbita maxima (Rimu)	cmawmbB111
Cla97C03G061250	CmaCh10G008360	Cucurbita maxima (Rimu)	cmawmbB065
Cla97C03G061250	Lsi06G006920	Bottle gourd (USVL1VR-Ls)	lsiwmbB362
Cla97C03G061250	CsGy1G031200	Cucumber (Gy14) v2	cgybwmbB035
Cla97C03G061250	MELO3C010052.2	Melon (DHL92) v3.6.1	medwmbB229
Cla97C03G061250	Carg22723	Silver-seed gourd	carwmbB0560
Cla97C03G061250	Carg17798	Silver-seed gourd	carwmbB1021
Cla97C03G061250	CsaV3_1G044490	Cucumber (Chinese Long) v3	cucwmbB033

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla97C03G061250	Cucurbita moschata (Rifu)	cmowmbB052
Cla97C03G061250	Cucurbita moschata (Rifu)	cmowmbB097
Cla97C03G061250	Wax gourd	wgowmbB635
Cla97C03G061250	Wax gourd	wgowmbB639