Cucsa.356670.1 (mRNA) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GTAAGCATTTGAGAATTGGTGGCCGAATTGAAGTTCCGATATGGTGAGAGAGAAGAGCCCTGGCTTAAAGATCCTCTGGGTTTGGACTCTTGGCACTGCCGCCATTCTCGCTACAAGCGTTGTTCGCATGAGATTGAGAGATATGGAGAACACAGTCAACTTCAACTCCGATCAACAACCATCTCTTCACCACCAACAAACTTCTTCCACCGATTCCTTTTCCCTTGACGATGCTGACAAATCACAGGTTTAGAAGCTTTCACGCCTTTTAAATTGAAATTCAGCTTAATCTAGTAATTCTTTCTATTCCAATCTATCATCAAGGAATCTGGTTTTTCTTCAAATCCCATTTTCGGTGGAGTGTACATAATCTGTTTGATAGAATTCCTGAATGGAAAGAACTCCCATATTTTCAGTTGTAATGACCTTGCAATTGCTTTGGATCTTTGATGTTTTAGTTTAAATGAAATGTTTTATGTTTACTGCTACATTTACAAATTAGAAGGTCTGCCTCTAATTTGAAATTGATGGGTGATAATGAGGCTTTATACAACAAGTG GTAAGCATTTGAGAATTGGTGGCCGAATTGAAGTTCCGATATGGTGAGAGAGAAGAGCCCTGGCTTAAAGATCCTCTGGGTTTGGACTCTTGGCACTGCCGCCATTCTCGCTACAAGCGTTGTTCGCATGAGATTGAGAGATATGGAGAACACAGTCAACTTCAACTCCGATCAACAACCATCTCTTCACCACCAACAAACTTCTTCCACCGATTCCTTTTCCCTTGACGATGCTGACAAATCACAGGTTTAGAAGCTTTCACGCCTTTTAAATTGAAATTCAGCTTAATCTAGTAATTCTTTCTATTCCAATCTATCATCAAGGAATCTGGTTTTTCTTCAAATCCCATTTTCGGTGGAGTGTACATAATCTGTTTGATAGAATTCCTGAATGGAAAGAACTCCCATATTTTCAGTTGTAATGACCTTGCAATTGCTTTGGATCTTTGATGTTTTAGTTTAAATGAAATGTTTTATGTTTACTGCTACATTTACAAATTAGAAGGTCTGCCTCTAATTTGAAATTGATGGGTGATAATGAGGCTTTATACAACAAGTG ATGGTGAGAGAGAAGAGCCCTGGCTTAAAGATCCTCTGGGTTTGGACTCTTGGCACTGCCGCCATTCTCGCTACAAGCGTTGTTCGCATGAGATTGAGAGATATGGAGAACACAGTCAACTTCAACTCCGATCAACAACCATCTCTTCACCACCAACAAACTTCTTCCACCGATTCCTTTTCCCTTGACGATGCTGACAAATCACAGGTTTAG MVREKSPGLKILWVWTLGTAAILATSVVRMRLRDMENTVNFNSDQQPSLHHQQTSSTDSFSLDDADKSQV*
BLAST of Cucsa.356670.1 vs. TrEMBL
Match: A0A0A0LY21_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G656450 PE=4 SV=1) HSP 1 Score: 139.0 bits (349), Expect = 2.2e-30 Identity = 69/70 (98.57%), Postives = 69/70 (98.57%), Query Frame = 1
BLAST of Cucsa.356670.1 vs. TrEMBL
Match: M5W1G1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa017610mg PE=4 SV=1) HSP 1 Score: 77.8 bits (190), Expect = 5.9e-12 Identity = 39/62 (62.90%), Postives = 48/62 (77.42%), Query Frame = 1
BLAST of Cucsa.356670.1 vs. TrEMBL
Match: D7KF99_ARALL (Predicted protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_678215 PE=4 SV=1) HSP 1 Score: 76.6 bits (187), Expect = 1.3e-11 Identity = 38/64 (59.38%), Postives = 48/64 (75.00%), Query Frame = 1
BLAST of Cucsa.356670.1 vs. TrEMBL
Match: R0GKQ1_9BRAS (Uncharacterized protein (Fragment) OS=Capsella rubella GN=CARUB_v10010720mg PE=4 SV=1) HSP 1 Score: 76.3 bits (186), Expect = 1.7e-11 Identity = 38/64 (59.38%), Postives = 47/64 (73.44%), Query Frame = 1
BLAST of Cucsa.356670.1 vs. TrEMBL
Match: Q84R19_ARATH (Putative uncharacterized protein At1g06010 OS=Arabidopsis thaliana GN=At1g06010 PE=2 SV=1) HSP 1 Score: 75.1 bits (183), Expect = 3.8e-11 Identity = 39/64 (60.94%), Postives = 47/64 (73.44%), Query Frame = 1
BLAST of Cucsa.356670.1 vs. TAIR10
Match: AT1G06010.1 (AT1G06010.1 unknown protein) HSP 1 Score: 75.1 bits (183), Expect = 1.9e-14 Identity = 39/64 (60.94%), Postives = 47/64 (73.44%), Query Frame = 1
BLAST of Cucsa.356670.1 vs. NCBI nr
Match: gi|778664107|ref|XP_011660223.1| (PREDICTED: uncharacterized protein LOC105436351 [Cucumis sativus]) HSP 1 Score: 139.0 bits (349), Expect = 3.1e-30 Identity = 69/70 (98.57%), Postives = 69/70 (98.57%), Query Frame = 1
BLAST of Cucsa.356670.1 vs. NCBI nr
Match: gi|659085942|ref|XP_008443690.1| (PREDICTED: uncharacterized protein LOC103487223 [Cucumis melo]) HSP 1 Score: 134.0 bits (336), Expect = 1.0e-28 Identity = 68/76 (89.47%), Postives = 70/76 (92.11%), Query Frame = 1
BLAST of Cucsa.356670.1 vs. NCBI nr
Match: gi|645223065|ref|XP_008218451.1| (PREDICTED: uncharacterized protein LOC103318797 [Prunus mume]) HSP 1 Score: 78.6 bits (192), Expect = 5.0e-12 Identity = 37/68 (54.41%), Postives = 46/68 (67.65%), Query Frame = 1
BLAST of Cucsa.356670.1 vs. NCBI nr
Match: gi|727570384|ref|XP_010457712.1| (PREDICTED: uncharacterized protein LOC104739148 isoform X2 [Camelina sativa]) HSP 1 Score: 77.8 bits (190), Expect = 8.5e-12 Identity = 39/64 (60.94%), Postives = 48/64 (75.00%), Query Frame = 1
BLAST of Cucsa.356670.1 vs. NCBI nr
Match: gi|595831807|ref|XP_007206345.1| (hypothetical protein PRUPE_ppa017610mg [Prunus persica]) HSP 1 Score: 77.8 bits (190), Expect = 8.5e-12 Identity = 39/62 (62.90%), Postives = 48/62 (77.42%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
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