Cucsa.166030 (gene) Cucumber (Gy14) v1

Overview
NameCucsa.166030
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionLOB domain-containing protein, putative
Locationscaffold01153 : 1320212 .. 1321291 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTTACGTGGCCAAATGTACTAATAATTCTCCTCCAACTCCCATCAGTGTTAATAATAATCCAAATAATCCTTTATCTTTCTCCCCAATGTCTTCTTCCCCACCCACTTCTCAACCATCCTCCCCTCCGCCCCCTGCGGTGGTTCTCAGCCCCTGCGCTGCCTGTAAGATCCTCCGTCGCCGCTGCGTCGAGAAATGCGTTTTGGCTCCTTATTTCCCTCCCACTGACCCTCTTAAGTTCACCATTGCCCATAGAGTTTTTGGAGCTAGCAATATCATCAAGTTCCTGCAAGTATGCCCTCCATTTCTTTtCCTTTTTTTTTttAATCAAAAGTTTATCATTAGAATCTCCAACTTTCCTACAATGCCCTTTGAAATGGTCTAATATATCTTCTCATATATACTTACTATAATATTCTATATTCTTTTAGATGAGGGATTTTAAAAAaGGAAGAAAAGAAAATCTATTTTTGTTTAGAGTTTAAGGTTAGAAAATTACTATTAGTAATAATGGTAACAAGTTTCTTTGGTATTTCTAAATGTAAGAAAAATATATAAGAGGGGTATAGTTGGATTTAACTTAGAAAAGAAAATGAATTGATTTGATTTGACTTAACTAGGTTTTTTTtACTTTtGATGGGACTTAATTAATGTATCAATTCCCGTAATTGGTGGAATTTTGGTTTAATTAAACTTTCATTTAGGTTAGATTAAAATTTAGTTGAATTTTGATATTGAGAAAAGTTTACAAATTTTGTAGGAGCTTCCCGAGTGCCAAAGAACGGATGCAGTGAGCAGTATGGTATACGAAGCAAATGCTCGTCTGAGAGATCCAGTTTACGGTAGTGCAGGCGCAATTTGCCAACTGCAAAAGCAAGTGAGCGAACTACAAGCTCAACTAGCCAAGGCTAGGGCAGAGGTGGCCAATATGCAGCAACAACAAGCCAACTTACTAGCCTTAATTTGCATGGAAATGAGGCAATCACCGGAGCCTGTTTGGCAGCCGCAACTGGTGGACACTACATGCTTCCTCGATGACGCCACCCTCAGCTCACCATGGGAGCCACTCTGGACGTGA

mRNA sequence

atGGCTTACGTGGCCAAATGTACTAATAATTCTCCTCCAACTCCCATCAGTGTTAATAATAATCCAAATAATCCTTTATCTTTCTCCCCAATGTCTTCTTCCCCACCCACTTCTCAACCATCCTCCCCTCCGCCCCCTGCGGTGGTTCTCAGCCCCTGCGCTGCCTGTAAGATCCTCCGTCGCCGCTGCGTCGAGAAATGCGTTTTGGCTCCTTATTTCCCTCCCACTGACCCTCTTAAGTTCACCATTGCCCATAGAGTTTTTGGAGCTAGCAATATCATCAAGTTCCTGCAAGAGCTTCCCGAGTGCCAAAGAACGGATGCAGTGAGCAGTATGGTATACGAAGCAAATGCTCGTCTGAGAGATCCAGTTTACGGTAGTGCAGGCGCAATTTGCCAACTGCAAAAGCAAGTGAGCGAACTACAAGCTCAACTAGCCAAGGCTAGGGCAGAGGTGGCCAATATGCAGCAACAACAAGCCAACTTACTAGCCTTAATTTGCATGGAAATGAGGCAATCACCGGAGCCTGTTTGGCAGCCGCAACTGGTGGACACTACATGCTTCCTCGATGACGCCACCCTCAGCTCACCATGGGAGCCACTCTGGACGTGA

Coding sequence (CDS)

ATGGCTTACGTGGCCAAATGTACTAATAATTCTCCTCCAACTCCCATCAGTGTTAATAATAATCCAAATAATCCTTTATCTTTCTCCCCAATGTCTTCTTCCCCACCCACTTCTCAACCATCCTCCCCTCCGCCCCCTGCGGTGGTTCTCAGCCCCTGCGCTGCCTGTAAGATCCTCCGTCGCCGCTGCGTCGAGAAATGCGTTTTGGCTCCTTATTTCCCTCCCACTGACCCTCTTAAGTTCACCATTGCCCATAGAGTTTTTGGAGCTAGCAATATCATCAAGTTCCTGCAAGAGCTTCCCGAGTGCCAAAGAACGGATGCAGTGAGCAGTATGGTATACGAAGCAAATGCTCGTCTGAGAGATCCAGTTTACGGTAGTGCAGGCGCAATTTGCCAACTGCAAAAGCAAGTGAGCGAACTACAAGCTCAACTAGCCAAGGCTAGGGCAGAGGTGGCCAATATGCAGCAACAACAAGCCAACTTACTAGCCTTAATTTGCATGGAAATGAGGCAATCACCGGAGCCTGTTTGGCAGCCGCAACTGGTGGACACTACATGCTTCCTCGATGACGCCACCCTCAGCTCACCATGGGAGCCACTCTGGACGTGA

Protein sequence

MAYVAKCTNNSPPTPISVNNNPNNPLSFSPMSSSPPTSQPSSPPPPAVVLSPCAACKILRRRCVEKCVLAPYFPPTDPLKFTIAHRVFGASNIIKFLQELPECQRTDAVSSMVYEANARLRDPVYGSAGAICQLQKQVSELQAQLAKARAEVANMQQQQANLLALICMEMRQSPEPVWQPQLVDTTCFLDDATLSSPWEPLWT*
Homology
[Close]
BLAST of Cucsa.166030 vs. Swiss-Prot
Match: LBD1_ARATH (LOB domain-containing protein 1 OS=Arabidopsis thaliana GN=LBD1 PE=2 SV=1)

HSP 1 Score: 223.0 bits (567), Expect = 2.9e-57
Identity = 120/185 (64.86%), Postives = 141/185 (76.22%), Query Frame = 1 

Query: 27  SFSPMSSSPPTSQPSSPPP---PAVVLSPCAACKILRRRCVEKCVLAPYFPPTDPLKFTI 86
           S + ++++P  S  SSPPP   P VVLSPCAACKILRRRC E+CVLAPYFPPTDP KFTI
Sbjct: 5   SDASVATTPIISSSSSPPPSLSPRVVLSPCAACKILRRRCAERCVLAPYFPPTDPAKFTI 64

Query: 87  AHRVFGASNIIKFLQELPECQRTDAVSSMVYEANARLRDPVYGSAGAICQLQKQVSELQA 146
           AHRVFGASNIIKFLQELPE QRTDAV+SMVYEA AR+RDPVYG AGAI  LQ+QVSELQA
Sbjct: 65  AHRVFGASNIIKFLQELPESQRTDAVNSMVYEAEARIRDPVYGCAGAIYHLQRQVSELQA 124

Query: 147 QLAKARAEVANMQQQQANLLALIC-MEMRQSPEPVWQPQLVDTTCFLDDATLSSP----W 204
           QLAKA+ E+ NMQ Q++NLL LI  M+ +Q  E        +   FL+D + ++     W
Sbjct: 125 QLAKAQVEMVNMQFQRSNLLELIYNMDQQQKQEQDNMSFESNDLGFLEDKSNTNSSMLWW 184

[Close]
BLAST of Cucsa.166030 vs. Swiss-Prot
Match: LBD11_ARATH (LOB domain-containing protein 11 OS=Arabidopsis thaliana GN=LBD11 PE=2 SV=2)

HSP 1 Score: 221.1 bits (562), Expect = 1.1e-56
Identity = 127/227 (55.95%), Postives = 144/227 (63.44%), Query Frame = 1 

Query: 4   VAKCTNNSPPTPISVNNNPNNPLSFSPMSSSPPTSQPSSPPPPAVVLSPCAACKILRRRC 63
           VAK T  + P      N+P      SP SS PP   P  PP P VVLSPCAACKILRRRC
Sbjct: 18  VAKVTETTTPV-----NSP------SPTSSPPPPPSPQQPPQPPVVLSPCAACKILRRRC 77

Query: 64  VEKCVLAPYFPPTDPLKFTIAHRVFGASNIIKFLQELPECQRTDAVSSMVYEANARLRDP 123
            +KCVLAPYFPPTDP KFTIAHRVFGASNIIKFLQELPE QRTDAV+SMVYEA AR+RDP
Sbjct: 78  ADKCVLAPYFPPTDPAKFTIAHRVFGASNIIKFLQELPESQRTDAVNSMVYEAGARMRDP 137

Query: 124 VYGSAGAICQLQKQVSELQAQLAKARAEVANMQQQQANLLALICMEMRQS----PEPVWQ 183
           VYG AGAI  LQ+QVSELQAQLAK + E+  MQ Q+++LL LI   M Q+     E   Q
Sbjct: 138 VYGCAGAIYHLQRQVSELQAQLAKTQVELVGMQLQRSSLLELI-YNMEQTKLSVQEQGQQ 197

Query: 184 PQLVDTTCFLDDATLSSP-----------------------WEPLWT 204
               +++    D  +SSP                       W+PLWT
Sbjct: 198 KMSFESSFESGDEFISSPDEESNDLGFLEDNNNNNNSSMSWWDPLWT 232

[Close]
BLAST of Cucsa.166030 vs. Swiss-Prot
Match: LBD12_ARATH (LOB domain-containing protein 12 OS=Arabidopsis thaliana GN=LBD12 PE=2 SV=2)

HSP 1 Score: 152.9 bits (385), Expect = 3.7e-36
Identity = 72/108 (66.67%), Postives = 86/108 (79.63%), Query Frame = 1 

Query: 51  SPCAACKILRRRCVEKCVLAPYFPPTDPLKFTIAHRVFGASNIIKFLQELPECQRTDAVS 110
           SPCA+CK+LRRRC + C+ APYFPP DP KF I H+VFGASN+ K LQELP  QR DAV+
Sbjct: 7   SPCASCKLLRRRCAKDCIFAPYFPPDDPHKFAIVHKVFGASNVSKMLQELPVHQRADAVN 66

Query: 111 SMVYEANARLRDPVYGSAGAICQLQKQVSELQAQLAKARAEVANMQQQ 159
           S+V+EANAR+RDPVYG  GAI  LQ QVS+LQ QLA A+AE+  +Q Q
Sbjct: 67  SLVFEANARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQ 114

[Close]
BLAST of Cucsa.166030 vs. Swiss-Prot
Match: LBD4_ARATH (LOB domain-containing protein 4 OS=Arabidopsis thaliana GN=LBD4 PE=2 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 1.9e-35
Identity = 73/110 (66.36%), Postives = 87/110 (79.09%), Query Frame = 1 

Query: 51  SPCAACKILRRRCVEKCVLAPYFPPTDPLKFTIAHRVFGASNIIKFLQELPECQRTDAVS 110
           SPCAACK+LRRRC + CV +PYFP  +P KF   HRVFGASN+ K LQELP  QR DAVS
Sbjct: 12  SPCAACKLLRRRCAQDCVFSPYFPADEPQKFANVHRVFGASNVNKMLQELPIHQRGDAVS 71

Query: 111 SMVYEANARLRDPVYGSAGAICQLQKQVSELQAQLAKARAEVANMQQQQA 161
           SMVYEANAR+RDPVYG  GAI  LQ+Q+  LQAQLA A+AEV +++ +Q+
Sbjct: 72  SMVYEANARVRDPVYGCVGAISSLQQQIDVLQAQLALAQAEVVHLRVRQS 121

[Close]
BLAST of Cucsa.166030 vs. Swiss-Prot
Match: LBD15_ARATH (LOB domain-containing protein 15 OS=Arabidopsis thaliana GN=LBD15 PE=2 SV=2)

HSP 1 Score: 146.0 bits (367), Expect = 4.6e-34
Identity = 67/120 (55.83%), Postives = 86/120 (71.67%), Query Frame = 1 

Query: 41  SSPPPPAVVLSPCAACKILRRRCVEKCVLAPYFPPTDPLKFTIAHRVFGASNIIKFLQEL 100
           S PP     ++PCAACK+LRRRC ++C  +PYF P +P KF   H+VFGASN+ K L E+
Sbjct: 34  SGPPGTLNTITPCAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVSKMLMEV 93

Query: 101 PECQRTDAVSSMVYEANARLRDPVYGSAGAICQLQKQVSELQAQLAKARAEVANMQQQQA 160
           PE QR DA +S+VYEAN RLRDPVYG  GAI  LQ+QV  LQA+L   R+E+   +Q++A
Sbjct: 94  PESQRADAANSLVYEANVRLRDPVYGCMGAISALQQQVQALQAELTAVRSEILKYKQREA 153

[Close]
BLAST of Cucsa.166030 vs. TrEMBL
Match: A0A0A0KNK9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G175870 PE=4 SV=1)

HSP 1 Score: 355.5 bits (911), Expect = 4.2e-95
Identity = 173/173 (100.00%), Postives = 173/173 (100.00%), Query Frame = 1 

Query: 31  MSSSPPTSQPSSPPPPAVVLSPCAACKILRRRCVEKCVLAPYFPPTDPLKFTIAHRVFGA 90
           MSSSPPTSQPSSPPPPAVVLSPCAACKILRRRCVEKCVLAPYFPPTDPLKFTIAHRVFGA
Sbjct: 1   MSSSPPTSQPSSPPPPAVVLSPCAACKILRRRCVEKCVLAPYFPPTDPLKFTIAHRVFGA 60

Query: 91  SNIIKFLQELPECQRTDAVSSMVYEANARLRDPVYGSAGAICQLQKQVSELQAQLAKARA 150
           SNIIKFLQELPECQRTDAVSSMVYEANARLRDPVYGSAGAICQLQKQVSELQAQLAKARA
Sbjct: 61  SNIIKFLQELPECQRTDAVSSMVYEANARLRDPVYGSAGAICQLQKQVSELQAQLAKARA 120

Query: 151 EVANMQQQQANLLALICMEMRQSPEPVWQPQLVDTTCFLDDATLSSPWEPLWT 204
           EVANMQQQQANLLALICMEMRQSPEPVWQPQLVDTTCFLDDATLSSPWEPLWT
Sbjct: 121 EVANMQQQQANLLALICMEMRQSPEPVWQPQLVDTTCFLDDATLSSPWEPLWT 173

[Close]
BLAST of Cucsa.166030 vs. TrEMBL
Match: V7BFQ1_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_007G092000g PE=4 SV=1)

HSP 1 Score: 287.3 bits (734), Expect = 1.4e-74
Identity = 157/219 (71.69%), Postives = 173/219 (79.00%), Query Frame = 1 

Query: 1   MAYVAKCTNNSPPTPISVN------NNP----NNPLSFSPM---SSSP-PTSQPSSPPPP 60
           M Y    T  SPP PI ++      N+P    ++P S SP    S SP P++ P SPPPP
Sbjct: 1   MDYKLNTTTPSPPIPIPIHVPSMLSNSPPSSSSSPPSHSPTPFPSPSPSPSAAPPSPPPP 60

Query: 61  AVVLSPCAACKILRRRCVEKCVLAPYFPPTDPLKFTIAHRVFGASNIIKFLQELPECQRT 120
            VV+SPCAACKILRRRCVEKCVLAPYFPPTDPLKFTIAHRVFGASNIIKFLQELPE QR 
Sbjct: 61  -VVVSPCAACKILRRRCVEKCVLAPYFPPTDPLKFTIAHRVFGASNIIKFLQELPESQRA 120

Query: 121 DAVSSMVYEANARLRDPVYGSAGAICQLQKQVSELQAQLAKARAEVANMQQQQANLLALI 180
           DAVSSMVYEANAR+RDPVYG AGAICQLQKQVSELQAQLAKA+AE+ NMQ QQANL+ALI
Sbjct: 121 DAVSSMVYEANARIRDPVYGCAGAICQLQKQVSELQAQLAKAQAELVNMQCQQANLVALI 180

Query: 181 CMEMRQSPEP-VWQPQ-LVDTTCFLDDATLSSPWEPLWT 204
           CMEM QS E  V QPQ LVD +CF++D T  + WEPLWT
Sbjct: 181 CMEMSQSQEQHVVQPQPLVDMSCFIEDNTFGTAWEPLWT 218

[Close]
BLAST of Cucsa.166030 vs. TrEMBL
Match: A0A151U637_CAJCA (LOB domain-containing protein 1 OS=Cajanus cajan GN=KK1_007445 PE=4 SV=1)

HSP 1 Score: 286.6 bits (732), Expect = 2.4e-74
Identity = 153/219 (69.86%), Postives = 168/219 (76.71%), Query Frame = 1 

Query: 1   MAYVAKCTNNSPPTPISV----NNNPNNPLSF----------SPMSSSPPTSQPSSPPPP 60
           M Y  K T  SPP PI V    +N+P +  S           SP   SPP + PS PPP 
Sbjct: 1   MEYKVKTTTTSPPIPIHVPTMLSNSPPSSSSSPPSQSHTPFPSPSQGSPPAAPPSPPPP- 60

Query: 61  AVVLSPCAACKILRRRCVEKCVLAPYFPPTDPLKFTIAHRVFGASNIIKFLQELPECQRT 120
            VV+SPCAACKILRRRCVEKCVLAPYFPPTDP+KFTIAHRVFGASNIIKFLQELPE QR 
Sbjct: 61  -VVVSPCAACKILRRRCVEKCVLAPYFPPTDPIKFTIAHRVFGASNIIKFLQELPESQRA 120

Query: 121 DAVSSMVYEANARLRDPVYGSAGAICQLQKQVSELQAQLAKARAEVANMQQQQANLLALI 180
           DAVSSMVYEANAR+RDPVYG AGAICQLQKQVSELQAQLAKA+AEV NMQ QQANL+ALI
Sbjct: 121 DAVSSMVYEANARIRDPVYGCAGAICQLQKQVSELQAQLAKAQAEVVNMQCQQANLVALI 180

Query: 181 CMEMRQSPEP-VWQPQ-LVDTTCFLDDATLSSPWEPLWT 204
           CMEM QS +  + QPQ  VD +CF++D T  + WEPLWT
Sbjct: 181 CMEMSQSQDQNMLQPQPHVDMSCFIEDNTFGTAWEPLWT 217

[Close]
BLAST of Cucsa.166030 vs. TrEMBL
Match: A0A0B2Q775_GLYSO (LOB domain-containing protein 1 OS=Glycine soja GN=glysoja_011584 PE=4 SV=1)

HSP 1 Score: 284.6 bits (727), Expect = 9.2e-74
Identity = 156/222 (70.27%), Postives = 170/222 (76.58%), Query Frame = 1 

Query: 1   MAYVAKCTNN--SPPTPISV----NNNP---------NNPLSF-SPMSSSPPTSQPSSPP 60
           M Y  K T +  SPP PI V    +N+P          +P  F SP   SP  + PS PP
Sbjct: 1   MEYKVKTTTSTPSPPIPIHVPTMLSNSPPSSSSSPPSQSPTPFPSPSQGSPSAAPPSPPP 60

Query: 61  P-PAVVLSPCAACKILRRRCVEKCVLAPYFPPTDPLKFTIAHRVFGASNIIKFLQELPEC 120
           P P VV+SPCAACKILRRRCVEKCVLAPYFPPTDPLKFTIAHRVFGASNIIKFLQELPE 
Sbjct: 61  PLPPVVVSPCAACKILRRRCVEKCVLAPYFPPTDPLKFTIAHRVFGASNIIKFLQELPES 120

Query: 121 QRTDAVSSMVYEANARLRDPVYGSAGAICQLQKQVSELQAQLAKARAEVANMQQQQANLL 180
           QR DAVSSMVYEANAR+RDPVYG AGAICQLQKQVSELQAQLAKA+AEV NMQ QQANL+
Sbjct: 121 QREDAVSSMVYEANARIRDPVYGCAGAICQLQKQVSELQAQLAKAQAEVVNMQCQQANLV 180

Query: 181 ALICMEMRQSPEP-VWQPQL-VDTTCFLDDATLSSPWEPLWT 204
           ALICMEM QS E  V QPQ  VD +CF++D +  + WEPLWT
Sbjct: 181 ALICMEMSQSQEQHVLQPQTHVDMSCFIEDNSFGTAWEPLWT 222

[Close]
BLAST of Cucsa.166030 vs. TrEMBL
Match: W9RZL7_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_014124 PE=4 SV=1)

HSP 1 Score: 283.9 bits (725), Expect = 1.6e-73
Identity = 142/191 (74.35%), Postives = 156/191 (81.68%), Query Frame = 1 

Query: 14  TPISVNNNPNNPLSFSPMSSSPPTSQPSSPPPPAVVLSPCAACKILRRRCVEKCVLAPYF 73
           +P +   +P N    SP S+  P   P  PPPP VVLSPCAACKILRRRCV+KCVLAPYF
Sbjct: 40  SPTTTFPSPPNSYQSSPTSAVTPVPLPPPPPPPPVVLSPCAACKILRRRCVDKCVLAPYF 99

Query: 74  PPTDPLKFTIAHRVFGASNIIKFLQELPECQRTDAVSSMVYEANARLRDPVYGSAGAICQ 133
           PPT+PLKFTIAHRVFGASNIIKFLQE+PE QR DAVSSMVYEANAR+RDPVYG AGAICQ
Sbjct: 100 PPTEPLKFTIAHRVFGASNIIKFLQEIPESQRADAVSSMVYEANARIRDPVYGCAGAICQ 159

Query: 134 LQKQVSELQAQLAKARAEVANMQQQQANLLALICMEMRQSPEPVWQPQ-LVDTTCFLDDA 193
           LQKQVSELQAQLAKA+AE+ NMQ QQANL+ALICM+M Q  EP  Q Q   DT+CFLDD 
Sbjct: 160 LQKQVSELQAQLAKAQAELVNMQCQQANLIALICMDMTQLQEPNSQQQPYGDTSCFLDDN 219

Query: 194 TLSSPWEPLWT 204
           TL + WEPLWT
Sbjct: 220 TLGTTWEPLWT 230

[Close]
BLAST of Cucsa.166030 vs. TAIR10
Match: AT1G07900.1 (AT1G07900.1 LOB domain-containing protein 1)

HSP 1 Score: 223.0 bits (567), Expect = 1.7e-58
Identity = 120/185 (64.86%), Postives = 141/185 (76.22%), Query Frame = 1 

Query: 27  SFSPMSSSPPTSQPSSPPP---PAVVLSPCAACKILRRRCVEKCVLAPYFPPTDPLKFTI 86
           S + ++++P  S  SSPPP   P VVLSPCAACKILRRRC E+CVLAPYFPPTDP KFTI
Sbjct: 5   SDASVATTPIISSSSSPPPSLSPRVVLSPCAACKILRRRCAERCVLAPYFPPTDPAKFTI 64

Query: 87  AHRVFGASNIIKFLQELPECQRTDAVSSMVYEANARLRDPVYGSAGAICQLQKQVSELQA 146
           AHRVFGASNIIKFLQELPE QRTDAV+SMVYEA AR+RDPVYG AGAI  LQ+QVSELQA
Sbjct: 65  AHRVFGASNIIKFLQELPESQRTDAVNSMVYEAEARIRDPVYGCAGAIYHLQRQVSELQA 124

Query: 147 QLAKARAEVANMQQQQANLLALIC-MEMRQSPEPVWQPQLVDTTCFLDDATLSSP----W 204
           QLAKA+ E+ NMQ Q++NLL LI  M+ +Q  E        +   FL+D + ++     W
Sbjct: 125 QLAKAQVEMVNMQFQRSNLLELIYNMDQQQKQEQDNMSFESNDLGFLEDKSNTNSSMLWW 184

[Close]
BLAST of Cucsa.166030 vs. TAIR10
Match: AT2G28500.1 (AT2G28500.1 LOB domain-containing protein 11)

HSP 1 Score: 221.1 bits (562), Expect = 6.3e-58
Identity = 127/227 (55.95%), Postives = 144/227 (63.44%), Query Frame = 1 

Query: 4   VAKCTNNSPPTPISVNNNPNNPLSFSPMSSSPPTSQPSSPPPPAVVLSPCAACKILRRRC 63
           VAK T  + P      N+P      SP SS PP   P  PP P VVLSPCAACKILRRRC
Sbjct: 18  VAKVTETTTPV-----NSP------SPTSSPPPPPSPQQPPQPPVVLSPCAACKILRRRC 77

Query: 64  VEKCVLAPYFPPTDPLKFTIAHRVFGASNIIKFLQELPECQRTDAVSSMVYEANARLRDP 123
            +KCVLAPYFPPTDP KFTIAHRVFGASNIIKFLQELPE QRTDAV+SMVYEA AR+RDP
Sbjct: 78  ADKCVLAPYFPPTDPAKFTIAHRVFGASNIIKFLQELPESQRTDAVNSMVYEAGARMRDP 137

Query: 124 VYGSAGAICQLQKQVSELQAQLAKARAEVANMQQQQANLLALICMEMRQS----PEPVWQ 183
           VYG AGAI  LQ+QVSELQAQLAK + E+  MQ Q+++LL LI   M Q+     E   Q
Sbjct: 138 VYGCAGAIYHLQRQVSELQAQLAKTQVELVGMQLQRSSLLELI-YNMEQTKLSVQEQGQQ 197

Query: 184 PQLVDTTCFLDDATLSSP-----------------------WEPLWT 204
               +++    D  +SSP                       W+PLWT
Sbjct: 198 KMSFESSFESGDEFISSPDEESNDLGFLEDNNNNNNSSMSWWDPLWT 232

[Close]
BLAST of Cucsa.166030 vs. TAIR10
Match: AT2G30130.1 (AT2G30130.1 Lateral organ boundaries (LOB) domain family protein)

HSP 1 Score: 152.9 bits (385), Expect = 2.1e-37
Identity = 72/108 (66.67%), Postives = 86/108 (79.63%), Query Frame = 1 

Query: 51  SPCAACKILRRRCVEKCVLAPYFPPTDPLKFTIAHRVFGASNIIKFLQELPECQRTDAVS 110
           SPCA+CK+LRRRC + C+ APYFPP DP KF I H+VFGASN+ K LQELP  QR DAV+
Sbjct: 7   SPCASCKLLRRRCAKDCIFAPYFPPDDPHKFAIVHKVFGASNVSKMLQELPVHQRADAVN 66

Query: 111 SMVYEANARLRDPVYGSAGAICQLQKQVSELQAQLAKARAEVANMQQQ 159
           S+V+EANAR+RDPVYG  GAI  LQ QVS+LQ QLA A+AE+  +Q Q
Sbjct: 67  SLVFEANARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQ 114

[Close]
BLAST of Cucsa.166030 vs. TAIR10
Match: AT1G31320.1 (AT1G31320.1 LOB domain-containing protein 4)

HSP 1 Score: 150.6 bits (379), Expect = 1.0e-36
Identity = 73/110 (66.36%), Postives = 87/110 (79.09%), Query Frame = 1 

Query: 51  SPCAACKILRRRCVEKCVLAPYFPPTDPLKFTIAHRVFGASNIIKFLQELPECQRTDAVS 110
           SPCAACK+LRRRC + CV +PYFP  +P KF   HRVFGASN+ K LQELP  QR DAVS
Sbjct: 12  SPCAACKLLRRRCAQDCVFSPYFPADEPQKFANVHRVFGASNVNKMLQELPIHQRGDAVS 71

Query: 111 SMVYEANARLRDPVYGSAGAICQLQKQVSELQAQLAKARAEVANMQQQQA 161
           SMVYEANAR+RDPVYG  GAI  LQ+Q+  LQAQLA A+AEV +++ +Q+
Sbjct: 72  SMVYEANARVRDPVYGCVGAISSLQQQIDVLQAQLALAQAEVVHLRVRQS 121

[Close]
BLAST of Cucsa.166030 vs. TAIR10
Match: AT2G40470.1 (AT2G40470.1 LOB domain-containing protein 15)

HSP 1 Score: 146.0 bits (367), Expect = 2.6e-35
Identity = 67/120 (55.83%), Postives = 86/120 (71.67%), Query Frame = 1 

Query: 41  SSPPPPAVVLSPCAACKILRRRCVEKCVLAPYFPPTDPLKFTIAHRVFGASNIIKFLQEL 100
           S PP     ++PCAACK+LRRRC ++C  +PYF P +P KF   H+VFGASN+ K L E+
Sbjct: 34  SGPPGTLNTITPCAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVSKMLMEV 93

Query: 101 PECQRTDAVSSMVYEANARLRDPVYGSAGAICQLQKQVSELQAQLAKARAEVANMQQQQA 160
           PE QR DA +S+VYEAN RLRDPVYG  GAI  LQ+QV  LQA+L   R+E+   +Q++A
Sbjct: 94  PESQRADAANSLVYEANVRLRDPVYGCMGAISALQQQVQALQAELTAVRSEILKYKQREA 153

[Close]
BLAST of Cucsa.166030 vs. NCBI nr
Match: gi|449451890|ref|XP_004143693.1| (PREDICTED: LOB domain-containing protein 1-like [Cucumis sativus])

HSP 1 Score: 419.5 bits (1077), Expect = 3.4e-114
Identity = 203/203 (100.00%), Postives = 203/203 (100.00%), Query Frame = 1 

Query: 1   MAYVAKCTNNSPPTPISVNNNPNNPLSFSPMSSSPPTSQPSSPPPPAVVLSPCAACKILR 60
           MAYVAKCTNNSPPTPISVNNNPNNPLSFSPMSSSPPTSQPSSPPPPAVVLSPCAACKILR
Sbjct: 1   MAYVAKCTNNSPPTPISVNNNPNNPLSFSPMSSSPPTSQPSSPPPPAVVLSPCAACKILR 60

Query: 61  RRCVEKCVLAPYFPPTDPLKFTIAHRVFGASNIIKFLQELPECQRTDAVSSMVYEANARL 120
           RRCVEKCVLAPYFPPTDPLKFTIAHRVFGASNIIKFLQELPECQRTDAVSSMVYEANARL
Sbjct: 61  RRCVEKCVLAPYFPPTDPLKFTIAHRVFGASNIIKFLQELPECQRTDAVSSMVYEANARL 120

Query: 121 RDPVYGSAGAICQLQKQVSELQAQLAKARAEVANMQQQQANLLALICMEMRQSPEPVWQP 180
           RDPVYGSAGAICQLQKQVSELQAQLAKARAEVANMQQQQANLLALICMEMRQSPEPVWQP
Sbjct: 121 RDPVYGSAGAICQLQKQVSELQAQLAKARAEVANMQQQQANLLALICMEMRQSPEPVWQP 180

Query: 181 QLVDTTCFLDDATLSSPWEPLWT 204
           QLVDTTCFLDDATLSSPWEPLWT
Sbjct: 181 QLVDTTCFLDDATLSSPWEPLWT 203

[Close]
BLAST of Cucsa.166030 vs. NCBI nr
Match: gi|659090144|ref|XP_008445860.1| (PREDICTED: LOB domain-containing protein 1-like [Cucumis melo])

HSP 1 Score: 415.6 bits (1067), Expect = 5.0e-113
Identity = 201/203 (99.01%), Postives = 201/203 (99.01%), Query Frame = 1 

Query: 1   MAYVAKCTNNSPPTPISVNNNPNNPLSFSPMSSSPPTSQPSSPPPPAVVLSPCAACKILR 60
           MAYVAKCTNNSPPTPIS NNNPNNPLSFSPMSSSPPTSQPSSPPPP VVLSPCAACKILR
Sbjct: 1   MAYVAKCTNNSPPTPISFNNNPNNPLSFSPMSSSPPTSQPSSPPPPPVVLSPCAACKILR 60

Query: 61  RRCVEKCVLAPYFPPTDPLKFTIAHRVFGASNIIKFLQELPECQRTDAVSSMVYEANARL 120
           RRCVEKCVLAPYFPPTDPLKFTIAHRVFGASNIIKFLQELPECQRTDAVSSMVYEANARL
Sbjct: 61  RRCVEKCVLAPYFPPTDPLKFTIAHRVFGASNIIKFLQELPECQRTDAVSSMVYEANARL 120

Query: 121 RDPVYGSAGAICQLQKQVSELQAQLAKARAEVANMQQQQANLLALICMEMRQSPEPVWQP 180
           RDPVYGSAGAICQLQKQVSELQAQLAKARAEVANMQQQQANLLALICMEMRQSPEPVWQP
Sbjct: 121 RDPVYGSAGAICQLQKQVSELQAQLAKARAEVANMQQQQANLLALICMEMRQSPEPVWQP 180

Query: 181 QLVDTTCFLDDATLSSPWEPLWT 204
           QLVDTTCFLDDATLSSPWEPLWT
Sbjct: 181 QLVDTTCFLDDATLSSPWEPLWT 203

[Close]
BLAST of Cucsa.166030 vs. NCBI nr
Match: gi|700195287|gb|KGN50464.1| (hypothetical protein Csa_5G175870 [Cucumis sativus])

HSP 1 Score: 355.5 bits (911), Expect = 6.1e-95
Identity = 173/173 (100.00%), Postives = 173/173 (100.00%), Query Frame = 1 

Query: 31  MSSSPPTSQPSSPPPPAVVLSPCAACKILRRRCVEKCVLAPYFPPTDPLKFTIAHRVFGA 90
           MSSSPPTSQPSSPPPPAVVLSPCAACKILRRRCVEKCVLAPYFPPTDPLKFTIAHRVFGA
Sbjct: 1   MSSSPPTSQPSSPPPPAVVLSPCAACKILRRRCVEKCVLAPYFPPTDPLKFTIAHRVFGA 60

Query: 91  SNIIKFLQELPECQRTDAVSSMVYEANARLRDPVYGSAGAICQLQKQVSELQAQLAKARA 150
           SNIIKFLQELPECQRTDAVSSMVYEANARLRDPVYGSAGAICQLQKQVSELQAQLAKARA
Sbjct: 61  SNIIKFLQELPECQRTDAVSSMVYEANARLRDPVYGSAGAICQLQKQVSELQAQLAKARA 120

Query: 151 EVANMQQQQANLLALICMEMRQSPEPVWQPQLVDTTCFLDDATLSSPWEPLWT 204
           EVANMQQQQANLLALICMEMRQSPEPVWQPQLVDTTCFLDDATLSSPWEPLWT
Sbjct: 121 EVANMQQQQANLLALICMEMRQSPEPVWQPQLVDTTCFLDDATLSSPWEPLWT 173

[Close]
BLAST of Cucsa.166030 vs. NCBI nr
Match: gi|593686006|ref|XP_007143674.1| (hypothetical protein PHAVU_007G092000g [Phaseolus vulgaris])

HSP 1 Score: 287.3 bits (734), Expect = 2.0e-74
Identity = 157/219 (71.69%), Postives = 173/219 (79.00%), Query Frame = 1 

Query: 1   MAYVAKCTNNSPPTPISVN------NNP----NNPLSFSPM---SSSP-PTSQPSSPPPP 60
           M Y    T  SPP PI ++      N+P    ++P S SP    S SP P++ P SPPPP
Sbjct: 1   MDYKLNTTTPSPPIPIPIHVPSMLSNSPPSSSSSPPSHSPTPFPSPSPSPSAAPPSPPPP 60

Query: 61  AVVLSPCAACKILRRRCVEKCVLAPYFPPTDPLKFTIAHRVFGASNIIKFLQELPECQRT 120
            VV+SPCAACKILRRRCVEKCVLAPYFPPTDPLKFTIAHRVFGASNIIKFLQELPE QR 
Sbjct: 61  -VVVSPCAACKILRRRCVEKCVLAPYFPPTDPLKFTIAHRVFGASNIIKFLQELPESQRA 120

Query: 121 DAVSSMVYEANARLRDPVYGSAGAICQLQKQVSELQAQLAKARAEVANMQQQQANLLALI 180
           DAVSSMVYEANAR+RDPVYG AGAICQLQKQVSELQAQLAKA+AE+ NMQ QQANL+ALI
Sbjct: 121 DAVSSMVYEANARIRDPVYGCAGAICQLQKQVSELQAQLAKAQAELVNMQCQQANLVALI 180

Query: 181 CMEMRQSPEP-VWQPQ-LVDTTCFLDDATLSSPWEPLWT 204
           CMEM QS E  V QPQ LVD +CF++D T  + WEPLWT
Sbjct: 181 CMEMSQSQEQHVVQPQPLVDMSCFIEDNTFGTAWEPLWT 218

[Close]
BLAST of Cucsa.166030 vs. NCBI nr
Match: gi|1012363571|gb|KYP74754.1| (LOB domain-containing protein 1 [Cajanus cajan])

HSP 1 Score: 286.6 bits (732), Expect = 3.5e-74
Identity = 153/219 (69.86%), Postives = 168/219 (76.71%), Query Frame = 1 

Query: 1   MAYVAKCTNNSPPTPISV----NNNPNNPLSF----------SPMSSSPPTSQPSSPPPP 60
           M Y  K T  SPP PI V    +N+P +  S           SP   SPP + PS PPP 
Sbjct: 1   MEYKVKTTTTSPPIPIHVPTMLSNSPPSSSSSPPSQSHTPFPSPSQGSPPAAPPSPPPP- 60

Query: 61  AVVLSPCAACKILRRRCVEKCVLAPYFPPTDPLKFTIAHRVFGASNIIKFLQELPECQRT 120
            VV+SPCAACKILRRRCVEKCVLAPYFPPTDP+KFTIAHRVFGASNIIKFLQELPE QR 
Sbjct: 61  -VVVSPCAACKILRRRCVEKCVLAPYFPPTDPIKFTIAHRVFGASNIIKFLQELPESQRA 120

Query: 121 DAVSSMVYEANARLRDPVYGSAGAICQLQKQVSELQAQLAKARAEVANMQQQQANLLALI 180
           DAVSSMVYEANAR+RDPVYG AGAICQLQKQVSELQAQLAKA+AEV NMQ QQANL+ALI
Sbjct: 121 DAVSSMVYEANARIRDPVYGCAGAICQLQKQVSELQAQLAKAQAEVVNMQCQQANLVALI 180

Query: 181 CMEMRQSPEP-VWQPQ-LVDTTCFLDDATLSSPWEPLWT 204
           CMEM QS +  + QPQ  VD +CF++D T  + WEPLWT
Sbjct: 181 CMEMSQSQDQNMLQPQPHVDMSCFIEDNTFGTAWEPLWT 217

The following BLAST results are available for this feature:
BLAST of Cucsa.166030 vs. Swiss-Prot
Match NameE-valueIdentityDescription
LBD1_ARATH2.9e-5764.86LOB domain-containing protein 1 OS=Arabidopsis thaliana GN=LBD1 PE=2 SV=1[more]
LBD11_ARATH1.1e-5655.95LOB domain-containing protein 11 OS=Arabidopsis thaliana GN=LBD11 PE=2 SV=2[more]
LBD12_ARATH3.7e-3666.67LOB domain-containing protein 12 OS=Arabidopsis thaliana GN=LBD12 PE=2 SV=2[more]
LBD4_ARATH1.9e-3566.36LOB domain-containing protein 4 OS=Arabidopsis thaliana GN=LBD4 PE=2 SV=1[more]
LBD15_ARATH4.6e-3455.83LOB domain-containing protein 15 OS=Arabidopsis thaliana GN=LBD15 PE=2 SV=2[more]
BLAST of Cucsa.166030 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KNK9_CUCSA4.2e-95100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_5G175870 PE=4 SV=1[more]
V7BFQ1_PHAVU1.4e-7471.69Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_007G092000g PE=4 SV=1[more]
A0A151U637_CAJCA2.4e-7469.86LOB domain-containing protein 1 OS=Cajanus cajan GN=KK1_007445 PE=4 SV=1[more]
A0A0B2Q775_GLYSO9.2e-7470.27LOB domain-containing protein 1 OS=Glycine soja GN=glysoja_011584 PE=4 SV=1[more]
W9RZL7_9ROSA1.6e-7374.35Uncharacterized protein OS=Morus notabilis GN=L484_014124 PE=4 SV=1[more]
BLAST of Cucsa.166030 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G07900.11.7e-5864.86 LOB domain-containing protein 1[more]
AT2G28500.16.3e-5855.95 LOB domain-containing protein 11[more]
AT2G30130.12.1e-3766.67 Lateral organ boundaries (LOB) domain family protein[more]
AT1G31320.11.0e-3666.36 LOB domain-containing protein 4[more]
AT2G40470.12.6e-3555.83 LOB domain-containing protein 15[more]
BLAST of Cucsa.166030 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449451890|ref|XP_004143693.1|3.4e-114100.00PREDICTED: LOB domain-containing protein 1-like [Cucumis sativus][more]
gi|659090144|ref|XP_008445860.1|5.0e-11399.01PREDICTED: LOB domain-containing protein 1-like [Cucumis melo][more]
gi|700195287|gb|KGN50464.1|6.1e-95100.00hypothetical protein Csa_5G175870 [Cucumis sativus][more]
gi|593686006|ref|XP_007143674.1|2.0e-7471.69hypothetical protein PHAVU_007G092000g [Phaseolus vulgaris][more]
gi|1012363571|gb|KYP74754.1|3.5e-7469.86LOB domain-containing protein 1 [Cajanus cajan][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR004883LOB
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006536 glutamate metabolic process
biological_process GO:0006206 pyrimidine nucleobase metabolic process
biological_process GO:0008150 biological_process
cellular_component GO:0005951 carbamoyl-phosphate synthase complex
cellular_component GO:0005575 cellular_component
molecular_function GO:0004088 carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.166030.1Cucsa.166030.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004883Lateral organ boundaries, LOBPFAMPF03195DUF260coord: 52..149
score: 3.2
IPR004883Lateral organ boundaries, LOBPROFILEPS50891LOBcoord: 51..152
score: 25
NoneNo IPR availableunknownCoilCoilcoord: 131..165
scor
NoneNo IPR availablePANTHERPTHR31301FAMILY NOT NAMEDcoord: 27..202
score: 7.6E
NoneNo IPR availablePANTHERPTHR31301:SF14LOB DOMAIN-CONTAINING PROTEIN 1-RELATEDcoord: 27..202
score: 7.6E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cucsa.166030Cla020073Watermelon (97103) v1cgywmB310
Cucsa.166030Cla004725Watermelon (97103) v1cgywmB302
Cucsa.166030Csa5G175870Cucumber (Chinese Long) v2cgycuB251
Cucsa.166030Csa5G496470Cucumber (Chinese Long) v2cgycuB252
Cucsa.166030MELO3C011730Melon (DHL92) v3.5.1cgymeB290
Cucsa.166030MELO3C025504Melon (DHL92) v3.5.1cgymeB289
Cucsa.166030ClCG02G013910Watermelon (Charleston Gray)cgywcgB290
Cucsa.166030CSPI05G08810Wild cucumber (PI 183967)cgycpiB258
Cucsa.166030CSPI05G16950Wild cucumber (PI 183967)cgycpiB259
Cucsa.166030CmaCh04G012420Cucurbita maxima (Rimu)cgycmaB0472
Cucsa.166030CmaCh20G004670Cucurbita maxima (Rimu)cgycmaB0468
Cucsa.166030CmaCh04G002720Cucurbita maxima (Rimu)cgycmaB0471
Cucsa.166030CmoCh20G005020Cucurbita moschata (Rifu)cgycmoB0470
Cucsa.166030CmoCh04G013150Cucurbita moschata (Rifu)cgycmoB0475
Cucsa.166030CmoCh04G002770Cucurbita moschata (Rifu)cgycmoB0474
Cucsa.166030CmoCh02G008700Cucurbita moschata (Rifu)cgycmoB0471
Cucsa.166030Lsi10G012950Bottle gourd (USVL1VR-Ls)cgylsiB272
Cucsa.166030Lsi04G008120Bottle gourd (USVL1VR-Ls)cgylsiB276
Cucsa.166030Lsi02G016970Bottle gourd (USVL1VR-Ls)cgylsiB274
Cucsa.166030Cp4.1LG16g05610Cucurbita pepo (Zucchini)cgycpeB0456
Cucsa.166030Cp4.1LG01g04270Cucurbita pepo (Zucchini)cgycpeB0457
Cucsa.166030Cp4.1LG01g10320Cucurbita pepo (Zucchini)cgycpeB0458
Cucsa.166030Cp4.1LG05g08710Cucurbita pepo (Zucchini)cgycpeB0460
Cucsa.166030MELO3C011730.2Melon (DHL92) v3.6.1cgymedB285
Cucsa.166030CsaV3_5G006250Cucumber (Chinese Long) v3cgycucB264
Cucsa.166030CsaV3_5G025960Cucumber (Chinese Long) v3cgycucB265
Cucsa.166030CsaV3_6G021580Cucumber (Chinese Long) v3cgycucB266
Cucsa.166030Cla97C02G039560Watermelon (97103) v2cgywmbB290
Cucsa.166030Bhi07G000881Wax gourdcgywgoB338
Cucsa.166030Carg20239Silver-seed gourdcarcgyB0358
Cucsa.166030Carg02065Silver-seed gourdcarcgyB0963
Cucsa.166030Carg25670Silver-seed gourdcarcgyB0972
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None