CSPI05G08810 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI05G08810
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	LOB domain-containing protein, putative
Location	Chr5 : 7486684 .. 7487882 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAACTCACCAAAAAAGAGAGAGAAAATATTCTCTCTCCTCTCGCCCCCCACATTCTCTCTCTAGAAAATTTTAATTAAATACATATATATATATTTTTTTAATTTATGGCTTACGTGGCCAAATGTACTAATAATTCTCCTCCAACTCCCATCAGTGTTAATAATAATCCAAATAATCCTTTATCTTTCTCCCCAATGTCTTCTTCTCCACCCACTTCTCAACCATCCTCCCCTCCGCCCCCTGCGGTGGTTCTCAGCCCCTGCGCTGCCTGTAAGATCCTCCGTCGCCGCTGCGTCGAGAAATGCGTTTTGGCTCCTTATTTCCCTCCCACTGACCCTCTTAAGTTCACCATTGCCCATAGAGTTTTTGGAGCTAGCAATATCATCAAGTTCTTGCAAGTATGCCCTCCATTTCTTTTCCTTTTTTTTTTTTTTTTTAATCAAAAGTCTATCATTAGAATCTCCAACTTTCCTACAATGCCCTTTGAAATGGTCTAATATATCTTCTCATATATACTTACTATAATATTCTATATTCTTTTAGATGAGGGATTTTAAAAAAGGAAGAAAAGAAAATCTATTTTTGTTTAGAGTTTAAGGTTAGAAAATTACTATTAGTAATAATGGTAATAAGTTTCTTTAGTATTTCTAAATGTAAGAAAAATAAATAAGAGGGGTATAGTTGGATTTAACTTAGAAAAGAAAATGAATTGATTTGATTTGACTTAACTAGGTTTTTTTTACTTTTGATGGGACTTAATTAATGTATCAATTCCCGTAATTGGTGGAATTTTGGTTTAATTAAACTTTCATTTAGGTTAGATTAAAATTTAGTTGAATTTTGATAGAGGTTATTGAGAAAAGTTTACAAATTTTGTAGGAGCTTCCGGAGTGTCAAAGAACGGATGCAGTGAGCAGTATGGTATACGAAGCAAATGCTCGTCTGAGAGATCCAGTTTACGGTAGTGCAGGCGCAATTTGCCAACTGCAAAAGCAAGTGAGCGAACTACAAGCTCAACTAGCCAAGGCTAGGGCAGAGGTGGCCAATATGCAGCAACAACAAGCCAACTTACTAGCCTTAATTTGCATGGAAATGAGGCAATCACCGGAGCCTGTTTGGCAGCCGCAACTGGTGGACACTACATGCTTCCTCGATGACGCCACCCTCAGCTCACCATGGGAGCCACTCTGGACGTGA

mRNA sequence

ATGGCTTACGTGGCCAAATGTACTAATAATTCTCCTCCAACTCCCATCAGTGTTAATAATAATCCAAATAATCCTTTATCTTTCTCCCCAATGTCTTCTTCTCCACCCACTTCTCAACCATCCTCCCCTCCGCCCCCTGCGGTGGTTCTCAGCCCCTGCGCTGCCTGTAAGATCCTCCGTCGCCGCTGCGTCGAGAAATGCGTTTTGGCTCCTTATTTCCCTCCCACTGACCCTCTTAAGTTCACCATTGCCCATAGAGTTTTTGGAGCTAGCAATATCATCAAGTTCTTGCAAGAGCTTCCGGAGTGTCAAAGAACGGATGCAGTGAGCAGTATGGTATACGAAGCAAATGCTCGTCTGAGAGATCCAGTTTACGGTAGTGCAGGCGCAATTTGCCAACTGCAAAAGCAAGTGAGCGAACTACAAGCTCAACTAGCCAAGGCTAGGGCAGAGGTGGCCAATATGCAGCAACAACAAGCCAACTTACTAGCCTTAATTTGCATGGAAATGAGGCAATCACCGGAGCCTGTTTGGCAGCCGCAACTGGTGGACACTACATGCTTCCTCGATGACGCCACCCTCAGCTCACCATGGGAGCCACTCTGGACGTGA

Coding sequence (CDS)

ATGGCTTACGTGGCCAAATGTACTAATAATTCTCCTCCAACTCCCATCAGTGTTAATAATAATCCAAATAATCCTTTATCTTTCTCCCCAATGTCTTCTTCTCCACCCACTTCTCAACCATCCTCCCCTCCGCCCCCTGCGGTGGTTCTCAGCCCCTGCGCTGCCTGTAAGATCCTCCGTCGCCGCTGCGTCGAGAAATGCGTTTTGGCTCCTTATTTCCCTCCCACTGACCCTCTTAAGTTCACCATTGCCCATAGAGTTTTTGGAGCTAGCAATATCATCAAGTTCTTGCAAGAGCTTCCGGAGTGTCAAAGAACGGATGCAGTGAGCAGTATGGTATACGAAGCAAATGCTCGTCTGAGAGATCCAGTTTACGGTAGTGCAGGCGCAATTTGCCAACTGCAAAAGCAAGTGAGCGAACTACAAGCTCAACTAGCCAAGGCTAGGGCAGAGGTGGCCAATATGCAGCAACAACAAGCCAACTTACTAGCCTTAATTTGCATGGAAATGAGGCAATCACCGGAGCCTGTTTGGCAGCCGCAACTGGTGGACACTACATGCTTCCTCGATGACGCCACCCTCAGCTCACCATGGGAGCCACTCTGGACGTGA

Homology

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BLAST of CSPI05G08810 vs. Swiss-Prot
Match: LBD1_ARATH (LOB domain-containing protein 1 OS=Arabidopsis thaliana GN=LBD1 PE=2 SV=1)

HSP 1 Score: 212.6 bits (540), Expect = 4.0e-54
Identity = 120/185 (64.86%), Postives = 141/185 (76.22%), Query Frame = 1


Query: 27  SFSPMSSSPPTSQPSSPPP---PAVVLSPCAACKILRRRCVEKCVLAPYFPPTDPLKFTI 86
           S + ++++P  S  SSPPP   P VVLSPCAACKILRRRC E+CVLAPYFPPTDP KFTI
Sbjct: 5   SDASVATTPIISSSSSPPPSLSPRVVLSPCAACKILRRRCAERCVLAPYFPPTDPAKFTI 64

Query: 87  AHRVFGASNIIKFLQELPECQRTDAVSSMVYEANARLRDPVYGSAGAICQLQKQVSELQA 146
           AHRVFGASNIIKFLQELPE QRTDAV+SMVYEA AR+RDPVYG AGAI  LQ+QVSELQA
Sbjct: 65  AHRVFGASNIIKFLQELPESQRTDAVNSMVYEAEARIRDPVYGCAGAIYHLQRQVSELQA 124

Query: 147 QLAKARAEVANMQQQQANLLALIC-MEMRQSPEPVWQPQLVDTTCFLDDATLSSP----W 204
           QLAKA+ E+ NMQ Q++NLL LI  M+ +Q  E        +   FL+D + ++     W
Sbjct: 125 QLAKAQVEMVNMQFQRSNLLELIYNMDQQQKQEQDNMSFESNDLGFLEDKSNTNSSMLWW 184

[Close]

BLAST of CSPI05G08810 vs. Swiss-Prot
Match: LBD11_ARATH (LOB domain-containing protein 11 OS=Arabidopsis thaliana GN=LBD11 PE=2 SV=2)

HSP 1 Score: 208.0 bits (528), Expect = 9.8e-53
Identity = 127/227 (55.95%), Postives = 144/227 (63.44%), Query Frame = 1


Query: 4   VAKCTNNSPPTPISVNNNPNNPLSFSPMSSSPPTSQPSSPPPPAVVLSPCAACKILRRRC 63
           VAK T  + P      N+P      SP SS PP   P  PP P VVLSPCAACKILRRRC
Sbjct: 18  VAKVTETTTPV-----NSP------SPTSSPPPPPSPQQPPQPPVVLSPCAACKILRRRC 77

Query: 64  VEKCVLAPYFPPTDPLKFTIAHRVFGASNIIKFLQELPECQRTDAVSSMVYEANARLRDP 123
            +KCVLAPYFPPTDP KFTIAHRVFGASNIIKFLQELPE QRTDAV+SMVYEA AR+RDP
Sbjct: 78  ADKCVLAPYFPPTDPAKFTIAHRVFGASNIIKFLQELPESQRTDAVNSMVYEAGARMRDP 137

Query: 124 VYGSAGAICQLQKQVSELQAQLAKARAEVANMQQQQANLLALICMEMRQS----PEPVWQ 183
           VYG AGAI  LQ+QVSELQAQLAK + E+  MQ Q+++LL LI   M Q+     E   Q
Sbjct: 138 VYGCAGAIYHLQRQVSELQAQLAKTQVELVGMQLQRSSLLELI-YNMEQTKLSVQEQGQQ 197

Query: 184 PQLVDTTCFLDDATLSSP-----------------------WEPLWT 204
               +++    D  +SSP                       W+PLWT
Sbjct: 198 KMSFESSFESGDEFISSPDEESNDLGFLEDNNNNNNSSMSWWDPLWT 232

[Close]

BLAST of CSPI05G08810 vs. Swiss-Prot
Match: LBD12_ARATH (LOB domain-containing protein 12 OS=Arabidopsis thaliana GN=LBD12 PE=2 SV=2)

HSP 1 Score: 149.8 bits (377), Expect = 3.2e-35
Identity = 72/108 (66.67%), Postives = 86/108 (79.63%), Query Frame = 1


Query: 51  SPCAACKILRRRCVEKCVLAPYFPPTDPLKFTIAHRVFGASNIIKFLQELPECQRTDAVS 110
           SPCA+CK+LRRRC + C+ APYFPP DP KF I H+VFGASN+ K LQELP  QR DAV+
Sbjct: 7   SPCASCKLLRRRCAKDCIFAPYFPPDDPHKFAIVHKVFGASNVSKMLQELPVHQRADAVN 66

Query: 111 SMVYEANARLRDPVYGSAGAICQLQKQVSELQAQLAKARAEVANMQQQ 159
           S+V+EANAR+RDPVYG  GAI  LQ QVS+LQ QLA A+AE+  +Q Q
Sbjct: 67  SLVFEANARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQ 114

[Close]

BLAST of CSPI05G08810 vs. Swiss-Prot
Match: LBD4_ARATH (LOB domain-containing protein 4 OS=Arabidopsis thaliana GN=LBD4 PE=2 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 2.1e-34
Identity = 73/110 (66.36%), Postives = 87/110 (79.09%), Query Frame = 1


Query: 51  SPCAACKILRRRCVEKCVLAPYFPPTDPLKFTIAHRVFGASNIIKFLQELPECQRTDAVS 110
           SPCAACK+LRRRC + CV +PYFP  +P KF   HRVFGASN+ K LQELP  QR DAVS
Sbjct: 12  SPCAACKLLRRRCAQDCVFSPYFPADEPQKFANVHRVFGASNVNKMLQELPIHQRGDAVS 71

Query: 111 SMVYEANARLRDPVYGSAGAICQLQKQVSELQAQLAKARAEVANMQQQQA 161
           SMVYEANAR+RDPVYG  GAI  LQ+Q+  LQAQLA A+AEV +++ +Q+
Sbjct: 72  SMVYEANARVRDPVYGCVGAISSLQQQIDVLQAQLALAQAEVVHLRVRQS 121

[Close]

BLAST of CSPI05G08810 vs. Swiss-Prot
Match: LBD15_ARATH (LOB domain-containing protein 15 OS=Arabidopsis thaliana GN=LBD15 PE=2 SV=2)

HSP 1 Score: 139.8 bits (351), Expect = 3.3e-32
Identity = 67/120 (55.83%), Postives = 86/120 (71.67%), Query Frame = 1


Query: 41  SSPPPPAVVLSPCAACKILRRRCVEKCVLAPYFPPTDPLKFTIAHRVFGASNIIKFLQEL 100
           S PP     ++PCAACK+LRRRC ++C  +PYF P +P KF   H+VFGASN+ K L E+
Sbjct: 34  SGPPGTLNTITPCAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVSKMLMEV 93

Query: 101 PECQRTDAVSSMVYEANARLRDPVYGSAGAICQLQKQVSELQAQLAKARAEVANMQQQQA 160
           PE QR DA +S+VYEAN RLRDPVYG  GAI  LQ+QV  LQA+L   R+E+   +Q++A
Sbjct: 94  PESQRADAANSLVYEANVRLRDPVYGCMGAISALQQQVQALQAELTAVRSEILKYKQREA 153

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BLAST of CSPI05G08810 vs. TrEMBL
Match: A0A0A0KNK9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G175870 PE=4 SV=1)

HSP 1 Score: 346.3 bits (887), Expect = 2.6e-92
Identity = 173/173 (100.00%), Postives = 173/173 (100.00%), Query Frame = 1


Query: 31  MSSSPPTSQPSSPPPPAVVLSPCAACKILRRRCVEKCVLAPYFPPTDPLKFTIAHRVFGA 90
           MSSSPPTSQPSSPPPPAVVLSPCAACKILRRRCVEKCVLAPYFPPTDPLKFTIAHRVFGA
Sbjct: 1   MSSSPPTSQPSSPPPPAVVLSPCAACKILRRRCVEKCVLAPYFPPTDPLKFTIAHRVFGA 60

Query: 91  SNIIKFLQELPECQRTDAVSSMVYEANARLRDPVYGSAGAICQLQKQVSELQAQLAKARA 150
           SNIIKFLQELPECQRTDAVSSMVYEANARLRDPVYGSAGAICQLQKQVSELQAQLAKARA
Sbjct: 61  SNIIKFLQELPECQRTDAVSSMVYEANARLRDPVYGSAGAICQLQKQVSELQAQLAKARA 120

Query: 151 EVANMQQQQANLLALICMEMRQSPEPVWQPQLVDTTCFLDDATLSSPWEPLWT 204
           EVANMQQQQANLLALICMEMRQSPEPVWQPQLVDTTCFLDDATLSSPWEPLWT
Sbjct: 121 EVANMQQQQANLLALICMEMRQSPEPVWQPQLVDTTCFLDDATLSSPWEPLWT 173

[Close]

BLAST of CSPI05G08810 vs. TrEMBL
Match: A0A151U637_CAJCA (LOB domain-containing protein 1 OS=Cajanus cajan GN=KK1_007445 PE=4 SV=1)

HSP 1 Score: 273.1 bits (697), Expect = 2.8e-70
Identity = 153/219 (69.86%), Postives = 168/219 (76.71%), Query Frame = 1


Query: 1   MAYVAKCTNNSPPTPISV----NNNPNNPLSF----------SPMSSSPPTSQPSSPPPP 60
           M Y  K T  SPP PI V    +N+P +  S           SP   SPP + PS PPP 
Sbjct: 1   MEYKVKTTTTSPPIPIHVPTMLSNSPPSSSSSPPSQSHTPFPSPSQGSPPAAPPSPPPP- 60

Query: 61  AVVLSPCAACKILRRRCVEKCVLAPYFPPTDPLKFTIAHRVFGASNIIKFLQELPECQRT 120
            VV+SPCAACKILRRRCVEKCVLAPYFPPTDP+KFTIAHRVFGASNIIKFLQELPE QR 
Sbjct: 61  -VVVSPCAACKILRRRCVEKCVLAPYFPPTDPIKFTIAHRVFGASNIIKFLQELPESQRA 120

Query: 121 DAVSSMVYEANARLRDPVYGSAGAICQLQKQVSELQAQLAKARAEVANMQQQQANLLALI 180
           DAVSSMVYEANAR+RDPVYG AGAICQLQKQVSELQAQLAKA+AEV NMQ QQANL+ALI
Sbjct: 121 DAVSSMVYEANARIRDPVYGCAGAICQLQKQVSELQAQLAKAQAEVVNMQCQQANLVALI 180

Query: 181 CMEMRQSPEP-VWQPQ-LVDTTCFLDDATLSSPWEPLWT 204
           CMEM QS +  + QPQ  VD +CF++D T  + WEPLWT
Sbjct: 181 CMEMSQSQDQNMLQPQPHVDMSCFIEDNTFGTAWEPLWT 217

[Close]

BLAST of CSPI05G08810 vs. TrEMBL
Match: V7BFQ1_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_007G092000g PE=4 SV=1)

HSP 1 Score: 273.1 bits (697), Expect = 2.8e-70
Identity = 157/219 (71.69%), Postives = 173/219 (79.00%), Query Frame = 1


Query: 1   MAYVAKCTNNSPPTPISVN------NNP----NNPLSFSPM---SSSP-PTSQPSSPPPP 60
           M Y    T  SPP PI ++      N+P    ++P S SP    S SP P++ P SPPPP
Sbjct: 1   MDYKLNTTTPSPPIPIPIHVPSMLSNSPPSSSSSPPSHSPTPFPSPSPSPSAAPPSPPPP 60

Query: 61  AVVLSPCAACKILRRRCVEKCVLAPYFPPTDPLKFTIAHRVFGASNIIKFLQELPECQRT 120
            VV+SPCAACKILRRRCVEKCVLAPYFPPTDPLKFTIAHRVFGASNIIKFLQELPE QR 
Sbjct: 61  -VVVSPCAACKILRRRCVEKCVLAPYFPPTDPLKFTIAHRVFGASNIIKFLQELPESQRA 120

Query: 121 DAVSSMVYEANARLRDPVYGSAGAICQLQKQVSELQAQLAKARAEVANMQQQQANLLALI 180
           DAVSSMVYEANAR+RDPVYG AGAICQLQKQVSELQAQLAKA+AE+ NMQ QQANL+ALI
Sbjct: 121 DAVSSMVYEANARIRDPVYGCAGAICQLQKQVSELQAQLAKAQAELVNMQCQQANLVALI 180

Query: 181 CMEMRQSPEP-VWQPQ-LVDTTCFLDDATLSSPWEPLWT 204
           CMEM QS E  V QPQ LVD +CF++D T  + WEPLWT
Sbjct: 181 CMEMSQSQEQHVVQPQPLVDMSCFIEDNTFGTAWEPLWT 218

[Close]

BLAST of CSPI05G08810 vs. TrEMBL
Match: W9RZL7_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_014124 PE=4 SV=1)

HSP 1 Score: 270.4 bits (690), Expect = 1.8e-69
Identity = 142/191 (74.35%), Postives = 156/191 (81.68%), Query Frame = 1


Query: 14  TPISVNNNPNNPLSFSPMSSSPPTSQPSSPPPPAVVLSPCAACKILRRRCVEKCVLAPYF 73
           +P +   +P N    SP S+  P   P  PPPP VVLSPCAACKILRRRCV+KCVLAPYF
Sbjct: 40  SPTTTFPSPPNSYQSSPTSAVTPVPLPPPPPPPPVVLSPCAACKILRRRCVDKCVLAPYF 99

Query: 74  PPTDPLKFTIAHRVFGASNIIKFLQELPECQRTDAVSSMVYEANARLRDPVYGSAGAICQ 133
           PPT+PLKFTIAHRVFGASNIIKFLQE+PE QR DAVSSMVYEANAR+RDPVYG AGAICQ
Sbjct: 100 PPTEPLKFTIAHRVFGASNIIKFLQEIPESQRADAVSSMVYEANARIRDPVYGCAGAICQ 159

Query: 134 LQKQVSELQAQLAKARAEVANMQQQQANLLALICMEMRQSPEPVWQPQ-LVDTTCFLDDA 193
           LQKQVSELQAQLAKA+AE+ NMQ QQANL+ALICM+M Q  EP  Q Q   DT+CFLDD 
Sbjct: 160 LQKQVSELQAQLAKAQAELVNMQCQQANLIALICMDMTQLQEPNSQQQPYGDTSCFLDDN 219

Query: 194 TLSSPWEPLWT 204
           TL + WEPLWT
Sbjct: 220 TLGTTWEPLWT 230

[Close]

BLAST of CSPI05G08810 vs. TrEMBL
Match: A0A0B2Q775_GLYSO (LOB domain-containing protein 1 OS=Glycine soja GN=glysoja_011584 PE=4 SV=1)

HSP 1 Score: 270.4 bits (690), Expect = 1.8e-69
Identity = 156/222 (70.27%), Postives = 170/222 (76.58%), Query Frame = 1


Query: 1   MAYVAKCTNN--SPPTPISV----NNNP---------NNPLSF-SPMSSSPPTSQPSSPP 60
           M Y  K T +  SPP PI V    +N+P          +P  F SP   SP  + PS PP
Sbjct: 1   MEYKVKTTTSTPSPPIPIHVPTMLSNSPPSSSSSPPSQSPTPFPSPSQGSPSAAPPSPPP 60

Query: 61  P-PAVVLSPCAACKILRRRCVEKCVLAPYFPPTDPLKFTIAHRVFGASNIIKFLQELPEC 120
           P P VV+SPCAACKILRRRCVEKCVLAPYFPPTDPLKFTIAHRVFGASNIIKFLQELPE 
Sbjct: 61  PLPPVVVSPCAACKILRRRCVEKCVLAPYFPPTDPLKFTIAHRVFGASNIIKFLQELPES 120

Query: 121 QRTDAVSSMVYEANARLRDPVYGSAGAICQLQKQVSELQAQLAKARAEVANMQQQQANLL 180
           QR DAVSSMVYEANAR+RDPVYG AGAICQLQKQVSELQAQLAKA+AEV NMQ QQANL+
Sbjct: 121 QREDAVSSMVYEANARIRDPVYGCAGAICQLQKQVSELQAQLAKAQAEVVNMQCQQANLV 180

Query: 181 ALICMEMRQSPEP-VWQPQL-VDTTCFLDDATLSSPWEPLWT 204
           ALICMEM QS E  V QPQ  VD +CF++D +  + WEPLWT
Sbjct: 181 ALICMEMSQSQEQHVLQPQTHVDMSCFIEDNSFGTAWEPLWT 222

[Close]

BLAST of CSPI05G08810 vs. TAIR10
Match: AT1G07900.1 (AT1G07900.1 LOB domain-containing protein 1)

HSP 1 Score: 212.6 bits (540), Expect = 2.2e-55
Identity = 120/185 (64.86%), Postives = 141/185 (76.22%), Query Frame = 1


Query: 27  SFSPMSSSPPTSQPSSPPP---PAVVLSPCAACKILRRRCVEKCVLAPYFPPTDPLKFTI 86
           S + ++++P  S  SSPPP   P VVLSPCAACKILRRRC E+CVLAPYFPPTDP KFTI
Sbjct: 5   SDASVATTPIISSSSSPPPSLSPRVVLSPCAACKILRRRCAERCVLAPYFPPTDPAKFTI 64

Query: 87  AHRVFGASNIIKFLQELPECQRTDAVSSMVYEANARLRDPVYGSAGAICQLQKQVSELQA 146
           AHRVFGASNIIKFLQELPE QRTDAV+SMVYEA AR+RDPVYG AGAI  LQ+QVSELQA
Sbjct: 65  AHRVFGASNIIKFLQELPESQRTDAVNSMVYEAEARIRDPVYGCAGAIYHLQRQVSELQA 124

Query: 147 QLAKARAEVANMQQQQANLLALIC-MEMRQSPEPVWQPQLVDTTCFLDDATLSSP----W 204
           QLAKA+ E+ NMQ Q++NLL LI  M+ +Q  E        +   FL+D + ++     W
Sbjct: 125 QLAKAQVEMVNMQFQRSNLLELIYNMDQQQKQEQDNMSFESNDLGFLEDKSNTNSSMLWW 184

[Close]

BLAST of CSPI05G08810 vs. TAIR10
Match: AT2G28500.1 (AT2G28500.1 LOB domain-containing protein 11)

HSP 1 Score: 208.0 bits (528), Expect = 5.5e-54
Identity = 127/227 (55.95%), Postives = 144/227 (63.44%), Query Frame = 1


Query: 4   VAKCTNNSPPTPISVNNNPNNPLSFSPMSSSPPTSQPSSPPPPAVVLSPCAACKILRRRC 63
           VAK T  + P      N+P      SP SS PP   P  PP P VVLSPCAACKILRRRC
Sbjct: 18  VAKVTETTTPV-----NSP------SPTSSPPPPPSPQQPPQPPVVLSPCAACKILRRRC 77

Query: 64  VEKCVLAPYFPPTDPLKFTIAHRVFGASNIIKFLQELPECQRTDAVSSMVYEANARLRDP 123
            +KCVLAPYFPPTDP KFTIAHRVFGASNIIKFLQELPE QRTDAV+SMVYEA AR+RDP
Sbjct: 78  ADKCVLAPYFPPTDPAKFTIAHRVFGASNIIKFLQELPESQRTDAVNSMVYEAGARMRDP 137

Query: 124 VYGSAGAICQLQKQVSELQAQLAKARAEVANMQQQQANLLALICMEMRQS----PEPVWQ 183
           VYG AGAI  LQ+QVSELQAQLAK + E+  MQ Q+++LL LI   M Q+     E   Q
Sbjct: 138 VYGCAGAIYHLQRQVSELQAQLAKTQVELVGMQLQRSSLLELI-YNMEQTKLSVQEQGQQ 197

Query: 184 PQLVDTTCFLDDATLSSP-----------------------WEPLWT 204
               +++    D  +SSP                       W+PLWT
Sbjct: 198 KMSFESSFESGDEFISSPDEESNDLGFLEDNNNNNNSSMSWWDPLWT 232

[Close]

BLAST of CSPI05G08810 vs. TAIR10
Match: AT2G30130.1 (AT2G30130.1 Lateral organ boundaries (LOB) domain family protein)

HSP 1 Score: 149.8 bits (377), Expect = 1.8e-36
Identity = 72/108 (66.67%), Postives = 86/108 (79.63%), Query Frame = 1


Query: 51  SPCAACKILRRRCVEKCVLAPYFPPTDPLKFTIAHRVFGASNIIKFLQELPECQRTDAVS 110
           SPCA+CK+LRRRC + C+ APYFPP DP KF I H+VFGASN+ K LQELP  QR DAV+
Sbjct: 7   SPCASCKLLRRRCAKDCIFAPYFPPDDPHKFAIVHKVFGASNVSKMLQELPVHQRADAVN 66

Query: 111 SMVYEANARLRDPVYGSAGAICQLQKQVSELQAQLAKARAEVANMQQQ 159
           S+V+EANAR+RDPVYG  GAI  LQ QVS+LQ QLA A+AE+  +Q Q
Sbjct: 67  SLVFEANARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQ 114

[Close]

BLAST of CSPI05G08810 vs. TAIR10
Match: AT1G31320.1 (AT1G31320.1 LOB domain-containing protein 4)

HSP 1 Score: 147.1 bits (370), Expect = 1.2e-35
Identity = 73/110 (66.36%), Postives = 87/110 (79.09%), Query Frame = 1


Query: 51  SPCAACKILRRRCVEKCVLAPYFPPTDPLKFTIAHRVFGASNIIKFLQELPECQRTDAVS 110
           SPCAACK+LRRRC + CV +PYFP  +P KF   HRVFGASN+ K LQELP  QR DAVS
Sbjct: 12  SPCAACKLLRRRCAQDCVFSPYFPADEPQKFANVHRVFGASNVNKMLQELPIHQRGDAVS 71

Query: 111 SMVYEANARLRDPVYGSAGAICQLQKQVSELQAQLAKARAEVANMQQQQA 161
           SMVYEANAR+RDPVYG  GAI  LQ+Q+  LQAQLA A+AEV +++ +Q+
Sbjct: 72  SMVYEANARVRDPVYGCVGAISSLQQQIDVLQAQLALAQAEVVHLRVRQS 121

[Close]

BLAST of CSPI05G08810 vs. TAIR10
Match: AT2G40470.1 (AT2G40470.1 LOB domain-containing protein 15)

HSP 1 Score: 139.8 bits (351), Expect = 1.9e-33
Identity = 67/120 (55.83%), Postives = 86/120 (71.67%), Query Frame = 1


Query: 41  SSPPPPAVVLSPCAACKILRRRCVEKCVLAPYFPPTDPLKFTIAHRVFGASNIIKFLQEL 100
           S PP     ++PCAACK+LRRRC ++C  +PYF P +P KF   H+VFGASN+ K L E+
Sbjct: 34  SGPPGTLNTITPCAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVSKMLMEV 93

Query: 101 PECQRTDAVSSMVYEANARLRDPVYGSAGAICQLQKQVSELQAQLAKARAEVANMQQQQA 160
           PE QR DA +S+VYEAN RLRDPVYG  GAI  LQ+QV  LQA+L   R+E+   +Q++A
Sbjct: 94  PESQRADAANSLVYEANVRLRDPVYGCMGAISALQQQVQALQAELTAVRSEILKYKQREA 153

[Close]

BLAST of CSPI05G08810 vs. NCBI nr
Match: gi|449451890|ref|XP_004143693.1| (PREDICTED: LOB domain-containing protein 1-like [Cucumis sativus])

HSP 1 Score: 405.2 bits (1040), Expect = 6.7e-110
Identity = 203/203 (100.00%), Postives = 203/203 (100.00%), Query Frame = 1


Query: 1   MAYVAKCTNNSPPTPISVNNNPNNPLSFSPMSSSPPTSQPSSPPPPAVVLSPCAACKILR 60
           MAYVAKCTNNSPPTPISVNNNPNNPLSFSPMSSSPPTSQPSSPPPPAVVLSPCAACKILR
Sbjct: 1   MAYVAKCTNNSPPTPISVNNNPNNPLSFSPMSSSPPTSQPSSPPPPAVVLSPCAACKILR 60

Query: 61  RRCVEKCVLAPYFPPTDPLKFTIAHRVFGASNIIKFLQELPECQRTDAVSSMVYEANARL 120
           RRCVEKCVLAPYFPPTDPLKFTIAHRVFGASNIIKFLQELPECQRTDAVSSMVYEANARL
Sbjct: 61  RRCVEKCVLAPYFPPTDPLKFTIAHRVFGASNIIKFLQELPECQRTDAVSSMVYEANARL 120

Query: 121 RDPVYGSAGAICQLQKQVSELQAQLAKARAEVANMQQQQANLLALICMEMRQSPEPVWQP 180
           RDPVYGSAGAICQLQKQVSELQAQLAKARAEVANMQQQQANLLALICMEMRQSPEPVWQP
Sbjct: 121 RDPVYGSAGAICQLQKQVSELQAQLAKARAEVANMQQQQANLLALICMEMRQSPEPVWQP 180

Query: 181 QLVDTTCFLDDATLSSPWEPLWT 204
           QLVDTTCFLDDATLSSPWEPLWT
Sbjct: 181 QLVDTTCFLDDATLSSPWEPLWT 203

[Close]

BLAST of CSPI05G08810 vs. NCBI nr
Match: gi|659090144|ref|XP_008445860.1| (PREDICTED: LOB domain-containing protein 1-like [Cucumis melo])

HSP 1 Score: 401.4 bits (1030), Expect = 9.7e-109
Identity = 201/203 (99.01%), Postives = 201/203 (99.01%), Query Frame = 1


Query: 1   MAYVAKCTNNSPPTPISVNNNPNNPLSFSPMSSSPPTSQPSSPPPPAVVLSPCAACKILR 60
           MAYVAKCTNNSPPTPIS NNNPNNPLSFSPMSSSPPTSQPSSPPPP VVLSPCAACKILR
Sbjct: 1   MAYVAKCTNNSPPTPISFNNNPNNPLSFSPMSSSPPTSQPSSPPPPPVVLSPCAACKILR 60

Query: 61  RRCVEKCVLAPYFPPTDPLKFTIAHRVFGASNIIKFLQELPECQRTDAVSSMVYEANARL 120
           RRCVEKCVLAPYFPPTDPLKFTIAHRVFGASNIIKFLQELPECQRTDAVSSMVYEANARL
Sbjct: 61  RRCVEKCVLAPYFPPTDPLKFTIAHRVFGASNIIKFLQELPECQRTDAVSSMVYEANARL 120

Query: 121 RDPVYGSAGAICQLQKQVSELQAQLAKARAEVANMQQQQANLLALICMEMRQSPEPVWQP 180
           RDPVYGSAGAICQLQKQVSELQAQLAKARAEVANMQQQQANLLALICMEMRQSPEPVWQP
Sbjct: 121 RDPVYGSAGAICQLQKQVSELQAQLAKARAEVANMQQQQANLLALICMEMRQSPEPVWQP 180

Query: 181 QLVDTTCFLDDATLSSPWEPLWT 204
           QLVDTTCFLDDATLSSPWEPLWT
Sbjct: 181 QLVDTTCFLDDATLSSPWEPLWT 203

[Close]

BLAST of CSPI05G08810 vs. NCBI nr
Match: gi|700195287|gb|KGN50464.1| (hypothetical protein Csa_5G175870 [Cucumis sativus])

HSP 1 Score: 346.3 bits (887), Expect = 3.7e-92
Identity = 173/173 (100.00%), Postives = 173/173 (100.00%), Query Frame = 1


Query: 31  MSSSPPTSQPSSPPPPAVVLSPCAACKILRRRCVEKCVLAPYFPPTDPLKFTIAHRVFGA 90
           MSSSPPTSQPSSPPPPAVVLSPCAACKILRRRCVEKCVLAPYFPPTDPLKFTIAHRVFGA
Sbjct: 1   MSSSPPTSQPSSPPPPAVVLSPCAACKILRRRCVEKCVLAPYFPPTDPLKFTIAHRVFGA 60

Query: 91  SNIIKFLQELPECQRTDAVSSMVYEANARLRDPVYGSAGAICQLQKQVSELQAQLAKARA 150
           SNIIKFLQELPECQRTDAVSSMVYEANARLRDPVYGSAGAICQLQKQVSELQAQLAKARA
Sbjct: 61  SNIIKFLQELPECQRTDAVSSMVYEANARLRDPVYGSAGAICQLQKQVSELQAQLAKARA 120

Query: 151 EVANMQQQQANLLALICMEMRQSPEPVWQPQLVDTTCFLDDATLSSPWEPLWT 204
           EVANMQQQQANLLALICMEMRQSPEPVWQPQLVDTTCFLDDATLSSPWEPLWT
Sbjct: 121 EVANMQQQQANLLALICMEMRQSPEPVWQPQLVDTTCFLDDATLSSPWEPLWT 173

[Close]

BLAST of CSPI05G08810 vs. NCBI nr
Match: gi|593686006|ref|XP_007143674.1| (hypothetical protein PHAVU_007G092000g [Phaseolus vulgaris])

HSP 1 Score: 273.1 bits (697), Expect = 4.0e-70
Identity = 157/219 (71.69%), Postives = 173/219 (79.00%), Query Frame = 1


Query: 1   MAYVAKCTNNSPPTPISVN------NNP----NNPLSFSPM---SSSP-PTSQPSSPPPP 60
           M Y    T  SPP PI ++      N+P    ++P S SP    S SP P++ P SPPPP
Sbjct: 1   MDYKLNTTTPSPPIPIPIHVPSMLSNSPPSSSSSPPSHSPTPFPSPSPSPSAAPPSPPPP 60

Query: 61  AVVLSPCAACKILRRRCVEKCVLAPYFPPTDPLKFTIAHRVFGASNIIKFLQELPECQRT 120
            VV+SPCAACKILRRRCVEKCVLAPYFPPTDPLKFTIAHRVFGASNIIKFLQELPE QR 
Sbjct: 61  -VVVSPCAACKILRRRCVEKCVLAPYFPPTDPLKFTIAHRVFGASNIIKFLQELPESQRA 120

Query: 121 DAVSSMVYEANARLRDPVYGSAGAICQLQKQVSELQAQLAKARAEVANMQQQQANLLALI 180
           DAVSSMVYEANAR+RDPVYG AGAICQLQKQVSELQAQLAKA+AE+ NMQ QQANL+ALI
Sbjct: 121 DAVSSMVYEANARIRDPVYGCAGAICQLQKQVSELQAQLAKAQAELVNMQCQQANLVALI 180

Query: 181 CMEMRQSPEP-VWQPQ-LVDTTCFLDDATLSSPWEPLWT 204
           CMEM QS E  V QPQ LVD +CF++D T  + WEPLWT
Sbjct: 181 CMEMSQSQEQHVVQPQPLVDMSCFIEDNTFGTAWEPLWT 218

[Close]

BLAST of CSPI05G08810 vs. NCBI nr
Match: gi|1012363571|gb|KYP74754.1| (LOB domain-containing protein 1 [Cajanus cajan])

HSP 1 Score: 273.1 bits (697), Expect = 4.0e-70
Identity = 153/219 (69.86%), Postives = 168/219 (76.71%), Query Frame = 1


Query: 1   MAYVAKCTNNSPPTPISV----NNNPNNPLSF----------SPMSSSPPTSQPSSPPPP 60
           M Y  K T  SPP PI V    +N+P +  S           SP   SPP + PS PPP 
Sbjct: 1   MEYKVKTTTTSPPIPIHVPTMLSNSPPSSSSSPPSQSHTPFPSPSQGSPPAAPPSPPPP- 60

Query: 61  AVVLSPCAACKILRRRCVEKCVLAPYFPPTDPLKFTIAHRVFGASNIIKFLQELPECQRT 120
            VV+SPCAACKILRRRCVEKCVLAPYFPPTDP+KFTIAHRVFGASNIIKFLQELPE QR 
Sbjct: 61  -VVVSPCAACKILRRRCVEKCVLAPYFPPTDPIKFTIAHRVFGASNIIKFLQELPESQRA 120

Query: 121 DAVSSMVYEANARLRDPVYGSAGAICQLQKQVSELQAQLAKARAEVANMQQQQANLLALI 180
           DAVSSMVYEANAR+RDPVYG AGAICQLQKQVSELQAQLAKA+AEV NMQ QQANL+ALI
Sbjct: 121 DAVSSMVYEANARIRDPVYGCAGAICQLQKQVSELQAQLAKAQAEVVNMQCQQANLVALI 180

Query: 181 CMEMRQSPEP-VWQPQ-LVDTTCFLDDATLSSPWEPLWT 204
           CMEM QS +  + QPQ  VD +CF++D T  + WEPLWT
Sbjct: 181 CMEMSQSQDQNMLQPQPHVDMSCFIEDNTFGTAWEPLWT 217

The following BLAST results are available for this feature:

BLAST of CSPI05G08810 vs. Swiss-Prot


Match Name	E-value	Identity	Description
LBD1_ARATH	4.0e-54	64.86	LOB domain-containing protein 1 OS=Arabidopsis thaliana GN=LBD1 PE=2 SV=1	[more]
LBD11_ARATH	9.8e-53	55.95	LOB domain-containing protein 11 OS=Arabidopsis thaliana GN=LBD11 PE=2 SV=2	[more]
LBD12_ARATH	3.2e-35	66.67	LOB domain-containing protein 12 OS=Arabidopsis thaliana GN=LBD12 PE=2 SV=2	[more]
LBD4_ARATH	2.1e-34	66.36	LOB domain-containing protein 4 OS=Arabidopsis thaliana GN=LBD4 PE=2 SV=1	[more]
LBD15_ARATH	3.3e-32	55.83	LOB domain-containing protein 15 OS=Arabidopsis thaliana GN=LBD15 PE=2 SV=2	[more]

BLAST of CSPI05G08810 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KNK9_CUCSA	2.6e-92	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G175870 PE=4 SV=1	[more]
A0A151U637_CAJCA	2.8e-70	69.86	LOB domain-containing protein 1 OS=Cajanus cajan GN=KK1_007445 PE=4 SV=1	[more]
V7BFQ1_PHAVU	2.8e-70	71.69	Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_007G092000g PE=4 SV=1	[more]
W9RZL7_9ROSA	1.8e-69	74.35	Uncharacterized protein OS=Morus notabilis GN=L484_014124 PE=4 SV=1	[more]
A0A0B2Q775_GLYSO	1.8e-69	70.27	LOB domain-containing protein 1 OS=Glycine soja GN=glysoja_011584 PE=4 SV=1	[more]

BLAST of CSPI05G08810 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G07900.1	2.2e-55	64.86	LOB domain-containing protein 1	[more]
AT2G28500.1	5.5e-54	55.95	LOB domain-containing protein 11	[more]
AT2G30130.1	1.8e-36	66.67	Lateral organ boundaries (LOB) domain family protein	[more]
AT1G31320.1	1.2e-35	66.36	LOB domain-containing protein 4	[more]
AT2G40470.1	1.9e-33	55.83	LOB domain-containing protein 15	[more]

BLAST of CSPI05G08810 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449451890\|ref\|XP_004143693.1\|	6.7e-110	100.00	PREDICTED: LOB domain-containing protein 1-like [Cucumis sativus]	[more]
gi\|659090144\|ref\|XP_008445860.1\|	9.7e-109	99.01	PREDICTED: LOB domain-containing protein 1-like [Cucumis melo]	[more]
gi\|700195287\|gb\|KGN50464.1\|	3.7e-92	100.00	hypothetical protein Csa_5G175870 [Cucumis sativus]	[more]
gi\|593686006\|ref\|XP_007143674.1\|	4.0e-70	71.69	hypothetical protein PHAVU_007G092000g [Phaseolus vulgaris]	[more]
gi\|1012363571\|gb\|KYP74754.1\|	4.0e-70	69.86	LOB domain-containing protein 1 [Cajanus cajan]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR004883	LOB

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006536	glutamate metabolic process
biological_process	GO:0006206	pyrimidine nucleobase metabolic process
biological_process	GO:0008150	biological_process
cellular_component	GO:0005951	carbamoyl-phosphate synthase complex
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0004088	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI05G08810.1	CSPI05G08810.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004883	Lateral organ boundaries, LOB	PFAM	PF03195	DUF260	coord: 52..149 score: 3.2
IPR004883	Lateral organ boundaries, LOB	PROFILE	PS50891	LOB	coord: 51..152 score: 25
None	No IPR available	unknown	Coil	Coil	coord: 131..165 scor
None	No IPR available	PANTHER	PTHR31301	FAMILY NOT NAMED	coord: 27..202 score: 7.6E
None	No IPR available	PANTHER	PTHR31301:SF14	LOB DOMAIN-CONTAINING PROTEIN 1-RELATED	coord: 27..202 score: 7.6E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CSPI05G08810	Cla020073	Watermelon (97103) v1	cpiwmB440
CSPI05G08810	Cla004725	Watermelon (97103) v1	cpiwmB373
CSPI05G08810	Csa5G496470	Cucumber (Chinese Long) v2	cpicuB245
CSPI05G08810	Csa5G175870	Cucumber (Chinese Long) v2	cpicuB240
CSPI05G08810	MELO3C025504	Melon (DHL92) v3.5.1	cpimeB357
CSPI05G08810	MELO3C011730	Melon (DHL92) v3.5.1	cpimeB360
CSPI05G08810	ClCG02G013910	Watermelon (Charleston Gray)	cpiwcgB398
CSPI05G08810	Lsi04G008120	Bottle gourd (USVL1VR-Ls)	cpilsiB366
CSPI05G08810	Lsi02G016970	Bottle gourd (USVL1VR-Ls)	cpilsiB356
CSPI05G08810	MELO3C011730.2	Melon (DHL92) v3.6.1	cpimedB350
CSPI05G08810	CsaV3_5G025960	Cucumber (Chinese Long) v3	cpicucB292
CSPI05G08810	CsaV3_5G006250	Cucumber (Chinese Long) v3	cpicucB285
CSPI05G08810	Cla97C02G039560	Watermelon (97103) v2	cpiwmbB385
CSPI05G08810	Bhi07G000881	Wax gourd	cpiwgoB518
CSPI05G08810	Cucsa.166030	Cucumber (Gy14) v1	cgycpiB258
CSPI05G08810	CmaCh04G012420	Cucurbita maxima (Rimu)	cmacpiB756
CSPI05G08810	CmaCh04G002720	Cucurbita maxima (Rimu)	cmacpiB757
CSPI05G08810	CmoCh04G013150	Cucurbita moschata (Rifu)	cmocpiB746
CSPI05G08810	CmoCh04G002770	Cucurbita moschata (Rifu)	cmocpiB747
CSPI05G08810	Cp4.1LG01g04270	Cucurbita pepo (Zucchini)	cpecpiB438
CSPI05G08810	Cp4.1LG01g10320	Cucurbita pepo (Zucchini)	cpecpiB437
CSPI05G08810	CsGy5G006200	Cucumber (Gy14) v2	cgybcpiB226
CSPI05G08810	Carg25670	Silver-seed gourd	carcpiB0887
CSPI05G08810	Carg02065	Silver-seed gourd	carcpiB0878

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CSPI05G08810	CSPI05G16950	Wild cucumber (PI 183967)	cpicpiB175
CSPI05G08810	CSPI06G16210	Wild cucumber (PI 183967)	cpicpiB181

The following block(s) are covering this gene:

None