ClCG02G013910 (gene) Watermelon (Charleston Gray)

Overview
NameClCG02G013910
Typegene
OrganismCitrullus lanatus (Watermelon (Charleston Gray))
DescriptionLOB domain protein 11
LocationCG_Chr02 : 28053777 .. 28055048 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTTACGTGGCCAAATGTAGTAATTCTCCTCCAACTCCCATCACTGTTCCTAACCCCTTATCTTTCTCTCCAATGTCTTCTTCCTCCACCGCCACCAATTTTGCTTCCCCACCCACTTCTCAGCCCTCCTCTCCTCCTCCGCCTGCCGTCGTCCTCAGCCCCTGCGCCGCCTGTAAAATCCTCCGCCGCCGCTGCGTCGAGAAATGTGTTTTGGCTCCATATTTCCCTCCCACTGAGCCTCTTAAGTTCACCATTGCCCATAGAGTTTTTGGTGCTAGCAATATCATCAAGTTCTTGCAAGTATGCCCATTATTTATTTATTCTTTCCACTTTTCCACTTTTTCTTATTACAAATTTTCTATTTTACTTTTACATTTTTTTATAATTTATTTATTTATTTATTTTTTTTTATTATGCTCTCTAGTTCGAATCTCAACTAAAAAGTTTCCCAATTATACTATGAGTAATCAATCCTATGTATTAATTTTAGAAGTAATAATGGCCATTAACTTCTTTGGTATTTCTGAATGTAAGAAAAATAAATGAGAGGGGTATAGTTGGATTTAACTTAAAAACAGAAATTAATTGATTTGACTTAACTACGTTTTGACTTTTGATGGGACTTGATTAATTTTTAATCCCGTAATTTATGGAACTTTGGTTTAATTAAATTTTCTTTTAGGTTAAAATGAATAATATTTGTTAGTGAATAAAGTTCTGCTGGCGATTGAGAAAGATCAAAATTTGTTTGAGTTACATGGTTTCGTTTATTTTCTTTTCTATTAAATGGAGAAGTAGCGAACATTTTTATTATTAATTGACATTTTTGTAACTTGTTGACTTTGTTGAATTTTATTGAATTGAAAATTAGAATGGAAGATTTTGTGTTCAAAATTGGTACATATAATGTAATTTTTCTTCTTTAATTAATATTGTTTTAAAATTTTATAGGAGCTTCCAGAGTCTCAAAGAACAGATGCAGTGAGCAGTATGGTATACGAAGCAAATGCTCGACTACGAGATCCAGTTTATGGTAGTGCGGGTGCGATTTGTCAGCTGCAAAAGCAAGTGAGTGAGTTGCAAGCTCAACTAGCCAAGGCTAGGGCAGAGGTGGCTAACATGCAGCAACAACAAGCCAACTTACTAGCCTTGATTTGCATGGAAATGAGGCAGTCACCAGAACCCGTTTGGCCGCCGCAGCTCATTGACACTGCATGTTTCCTCGACGATGCCACCCTTAGCTCGCCGTGGGAGCCACTTTGGACATGA

mRNA sequence

ATGGCTTACGTGGCCAAATGTAGTAATTCTCCTCCAACTCCCATCACTGTTCCTAACCCCTTATCTTTCTCTCCAATGTCTTCTTCCTCCACCGCCACCAATTTTGCTTCCCCACCCACTTCTCAGCCCTCCTCTCCTCCTCCGCCTGCCGTCGTCCTCAGCCCCTGCGCCGCCTGTAAAATCCTCCGCCGCCGCTGCGTCGAGAAATGTGTTTTGGCTCCATATTTCCCTCCCACTGAGCCTCTTAAGTTCACCATTGCCCATAGAGTTTTTGGTGCTAGCAATATCATCAAGTTCTTGCAAGAGCTTCCAGAGTCTCAAAGAACAGATGCAGTGAGCAGTATGGTATACGAAGCAAATGCTCGACTACGAGATCCAGTTTATGGTAGTGCGGGTGCGATTTGTCAGCTGCAAAAGCAAGTGAGTGAGTTGCAAGCTCAACTAGCCAAGGCTAGGGCAGAGGTGGCTAACATGCAGCAACAACAAGCCAACTTACTAGCCTTGATTTGCATGGAAATGAGGCAGTCACCAGAACCCGTTTGGCCGCCGCAGCTCATTGACACTGCATGTTTCCTCGACGATGCCACCCTTAGCTCGCCGTGGGAGCCACTTTGGACATGA

Coding sequence (CDS)

ATGGCTTACGTGGCCAAATGTAGTAATTCTCCTCCAACTCCCATCACTGTTCCTAACCCCTTATCTTTCTCTCCAATGTCTTCTTCCTCCACCGCCACCAATTTTGCTTCCCCACCCACTTCTCAGCCCTCCTCTCCTCCTCCGCCTGCCGTCGTCCTCAGCCCCTGCGCCGCCTGTAAAATCCTCCGCCGCCGCTGCGTCGAGAAATGTGTTTTGGCTCCATATTTCCCTCCCACTGAGCCTCTTAAGTTCACCATTGCCCATAGAGTTTTTGGTGCTAGCAATATCATCAAGTTCTTGCAAGAGCTTCCAGAGTCTCAAAGAACAGATGCAGTGAGCAGTATGGTATACGAAGCAAATGCTCGACTACGAGATCCAGTTTATGGTAGTGCGGGTGCGATTTGTCAGCTGCAAAAGCAAGTGAGTGAGTTGCAAGCTCAACTAGCCAAGGCTAGGGCAGAGGTGGCTAACATGCAGCAACAACAAGCCAACTTACTAGCCTTGATTTGCATGGAAATGAGGCAGTCACCAGAACCCGTTTGGCCGCCGCAGCTCATTGACACTGCATGTTTCCTCGACGATGCCACCCTTAGCTCGCCGTGGGAGCCACTTTGGACATGA

Protein sequence

MAYVAKCSNSPPTPITVPNPLSFSPMSSSSTATNFASPPTSQPSSPPPPAVVLSPCAACKILRRRCVEKCVLAPYFPPTEPLKFTIAHRVFGASNIIKFLQELPESQRTDAVSSMVYEANARLRDPVYGSAGAICQLQKQVSELQAQLAKARAEVANMQQQQANLLALICMEMRQSPEPVWPPQLIDTACFLDDATLSSPWEPLWT
Homology
[Close]
BLAST of ClCG02G013910 vs. Swiss-Prot
Match: LBD1_ARATH (LOB domain-containing protein 1 OS=Arabidopsis thaliana GN=LBD1 PE=2 SV=1)

HSP 1 Score: 225.7 bits (574), Expect = 4.6e-58
Identity = 123/189 (65.08%), Postives = 140/189 (74.07%), Query Frame = 1 

Query: 26  MSSSSTATNFASPPTSQPSSPPP---PAVVLSPCAACKILRRRCVEKCVLAPYFPPTEPL 85
           M S S A+   +P  S  SSPPP   P VVLSPCAACKILRRRC E+CVLAPYFPPT+P 
Sbjct: 1   MESKSDASVATTPIISSSSSPPPSLSPRVVLSPCAACKILRRRCAERCVLAPYFPPTDPA 60

Query: 86  KFTIAHRVFGASNIIKFLQELPESQRTDAVSSMVYEANARLRDPVYGSAGAICQLQKQVS 145
           KFTIAHRVFGASNIIKFLQELPESQRTDAV+SMVYEA AR+RDPVYG AGAI  LQ+QVS
Sbjct: 61  KFTIAHRVFGASNIIKFLQELPESQRTDAVNSMVYEAEARIRDPVYGCAGAIYHLQRQVS 120

Query: 146 ELQAQLAKARAEVANMQQQQANLLALIC-MEMRQSPEPVWPPQLIDTACFLDDATLSSP- 205
           ELQAQLAKA+ E+ NMQ Q++NLL LI  M+ +Q  E        +   FL+D + ++  
Sbjct: 121 ELQAQLAKAQVEMVNMQFQRSNLLELIYNMDQQQKQEQDNMSFESNDLGFLEDKSNTNSS 180

Query: 206 ---WEPLWT 207
              W+PLWT
Sbjct: 181 MLWWDPLWT 189

[Close]
BLAST of ClCG02G013910 vs. Swiss-Prot
Match: LBD11_ARATH (LOB domain-containing protein 11 OS=Arabidopsis thaliana GN=LBD11 PE=2 SV=2)

HSP 1 Score: 214.5 bits (545), Expect = 1.1e-54
Identity = 113/166 (68.07%), Postives = 125/166 (75.30%), Query Frame = 1 

Query: 4   VAKCSNSPPTPITVPNPLSFSPMSSSSTATNFASPPTSQPSSPPPPAVVLSPCAACKILR 63
           VAK + +  TP+  P+P S SP            PP   P  PP P VVLSPCAACKILR
Sbjct: 18  VAKVTETT-TPVNSPSPTS-SP------------PPPPSPQQPPQPPVVLSPCAACKILR 77

Query: 64  RRCVEKCVLAPYFPPTEPLKFTIAHRVFGASNIIKFLQELPESQRTDAVSSMVYEANARL 123
           RRC +KCVLAPYFPPT+P KFTIAHRVFGASNIIKFLQELPESQRTDAV+SMVYEA AR+
Sbjct: 78  RRCADKCVLAPYFPPTDPAKFTIAHRVFGASNIIKFLQELPESQRTDAVNSMVYEAGARM 137

Query: 124 RDPVYGSAGAICQLQKQVSELQAQLAKARAEVANMQQQQANLLALI 170
           RDPVYG AGAI  LQ+QVSELQAQLAK + E+  MQ Q+++LL LI
Sbjct: 138 RDPVYGCAGAIYHLQRQVSELQAQLAKTQVELVGMQLQRSSLLELI 169

[Close]
BLAST of ClCG02G013910 vs. Swiss-Prot
Match: LBD4_ARATH (LOB domain-containing protein 4 OS=Arabidopsis thaliana GN=LBD4 PE=2 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 4.9e-36
Identity = 74/110 (67.27%), Postives = 85/110 (77.27%), Query Frame = 1 

Query: 54  SPCAACKILRRRCVEKCVLAPYFPPTEPLKFTIAHRVFGASNIIKFLQELPESQRTDAVS 113
           SPCAACK+LRRRC + CV +PYFP  EP KF   HRVFGASN+ K LQELP  QR DAVS
Sbjct: 12  SPCAACKLLRRRCAQDCVFSPYFPADEPQKFANVHRVFGASNVNKMLQELPIHQRGDAVS 71

Query: 114 SMVYEANARLRDPVYGSAGAICQLQKQVSELQAQLAKARAEVANMQQQQA 164
           SMVYEANAR+RDPVYG  GAI  LQ+Q+  LQAQLA A+AEV +++ +Q+
Sbjct: 72  SMVYEANARVRDPVYGCVGAISSLQQQIDVLQAQLALAQAEVVHLRVRQS 121

[Close]
BLAST of ClCG02G013910 vs. Swiss-Prot
Match: LBD12_ARATH (LOB domain-containing protein 12 OS=Arabidopsis thaliana GN=LBD12 PE=2 SV=2)

HSP 1 Score: 152.1 bits (383), Expect = 6.5e-36
Identity = 71/108 (65.74%), Postives = 84/108 (77.78%), Query Frame = 1 

Query: 54  SPCAACKILRRRCVEKCVLAPYFPPTEPLKFTIAHRVFGASNIIKFLQELPESQRTDAVS 113
           SPCA+CK+LRRRC + C+ APYFPP +P KF I H+VFGASN+ K LQELP  QR DAV+
Sbjct: 7   SPCASCKLLRRRCAKDCIFAPYFPPDDPHKFAIVHKVFGASNVSKMLQELPVHQRADAVN 66

Query: 114 SMVYEANARLRDPVYGSAGAICQLQKQVSELQAQLAKARAEVANMQQQ 162
           S+V+EANAR+RDPVYG  GAI  LQ QVS+LQ QLA A+AE+  +Q Q
Sbjct: 67  SLVFEANARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQ 114

[Close]
BLAST of ClCG02G013910 vs. Swiss-Prot
Match: LBD15_ARATH (LOB domain-containing protein 15 OS=Arabidopsis thaliana GN=LBD15 PE=2 SV=2)

HSP 1 Score: 149.1 bits (375), Expect = 5.5e-35
Identity = 69/120 (57.50%), Postives = 85/120 (70.83%), Query Frame = 1 

Query: 44  SSPPPPAVVLSPCAACKILRRRCVEKCVLAPYFPPTEPLKFTIAHRVFGASNIIKFLQEL 103
           S PP     ++PCAACK+LRRRC ++C  +PYF P EP KF   H+VFGASN+ K L E+
Sbjct: 34  SGPPGTLNTITPCAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVSKMLMEV 93

Query: 104 PESQRTDAVSSMVYEANARLRDPVYGSAGAICQLQKQVSELQAQLAKARAEVANMQQQQA 163
           PESQR DA +S+VYEAN RLRDPVYG  GAI  LQ+QV  LQA+L   R+E+   +Q++A
Sbjct: 94  PESQRADAANSLVYEANVRLRDPVYGCMGAISALQQQVQALQAELTAVRSEILKYKQREA 153

[Close]
BLAST of ClCG02G013910 vs. TrEMBL
Match: A0A0A0KNK9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G175870 PE=4 SV=1)

HSP 1 Score: 340.9 bits (873), Expect = 1.1e-90
Identity = 165/171 (96.49%), Postives = 168/171 (98.25%), Query Frame = 1 

Query: 36  ASPPTSQPSSPPPPAVVLSPCAACKILRRRCVEKCVLAPYFPPTEPLKFTIAHRVFGASN 95
           +SPPTSQPSSPPPPAVVLSPCAACKILRRRCVEKCVLAPYFPPT+PLKFTIAHRVFGASN
Sbjct: 3   SSPPTSQPSSPPPPAVVLSPCAACKILRRRCVEKCVLAPYFPPTDPLKFTIAHRVFGASN 62

Query: 96  IIKFLQELPESQRTDAVSSMVYEANARLRDPVYGSAGAICQLQKQVSELQAQLAKARAEV 155
           IIKFLQELPE QRTDAVSSMVYEANARLRDPVYGSAGAICQLQKQVSELQAQLAKARAEV
Sbjct: 63  IIKFLQELPECQRTDAVSSMVYEANARLRDPVYGSAGAICQLQKQVSELQAQLAKARAEV 122

Query: 156 ANMQQQQANLLALICMEMRQSPEPVWPPQLIDTACFLDDATLSSPWEPLWT 207
           ANMQQQQANLLALICMEMRQSPEPVW PQL+DT CFLDDATLSSPWEPLWT
Sbjct: 123 ANMQQQQANLLALICMEMRQSPEPVWQPQLVDTTCFLDDATLSSPWEPLWT 173

[Close]
BLAST of ClCG02G013910 vs. TrEMBL
Match: V7BFQ1_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_007G092000g PE=4 SV=1)

HSP 1 Score: 293.1 bits (749), Expect = 2.6e-76
Identity = 154/205 (75.12%), Postives = 169/205 (82.44%), Query Frame = 1 

Query: 12  PTPITVPNPLSFSPMSSSSTA-----TNFASP---PTSQPSSPPPPAVVLSPCAACKILR 71
           P PI VP+ LS SP SSSS+      T F SP   P++ P SPPPP VV+SPCAACKILR
Sbjct: 15  PIPIHVPSMLSNSPPSSSSSPPSHSPTPFPSPSPSPSAAPPSPPPP-VVVSPCAACKILR 74

Query: 72  RRCVEKCVLAPYFPPTEPLKFTIAHRVFGASNIIKFLQELPESQRTDAVSSMVYEANARL 131
           RRCVEKCVLAPYFPPT+PLKFTIAHRVFGASNIIKFLQELPESQR DAVSSMVYEANAR+
Sbjct: 75  RRCVEKCVLAPYFPPTDPLKFTIAHRVFGASNIIKFLQELPESQRADAVSSMVYEANARI 134

Query: 132 RDPVYGSAGAICQLQKQVSELQAQLAKARAEVANMQQQQANLLALICMEMRQSPEP--VW 191
           RDPVYG AGAICQLQKQVSELQAQLAKA+AE+ NMQ QQANL+ALICMEM QS E   V 
Sbjct: 135 RDPVYGCAGAICQLQKQVSELQAQLAKAQAELVNMQCQQANLVALICMEMSQSQEQHVVQ 194

Query: 192 PPQLIDTACFLDDATLSSPWEPLWT 207
           P  L+D +CF++D T  + WEPLWT
Sbjct: 195 PQPLVDMSCFIEDNTFGTAWEPLWT 218

[Close]
BLAST of ClCG02G013910 vs. TrEMBL
Match: A0A151U637_CAJCA (LOB domain-containing protein 1 OS=Cajanus cajan GN=KK1_007445 PE=4 SV=1)

HSP 1 Score: 292.0 bits (746), Expect = 5.8e-76
Identity = 154/214 (71.96%), Postives = 170/214 (79.44%), Query Frame = 1 

Query: 4   VAKCSNSPPTPITVPNPLSFSPMSSSSTA-----TNFASP----PTSQPSSPPPPAVVLS 63
           V   + SPP PI VP  LS SP SSSS+      T F SP    P + P SPPPP VV+S
Sbjct: 5   VKTTTTSPPIPIHVPTMLSNSPPSSSSSPPSQSHTPFPSPSQGSPPAAPPSPPPP-VVVS 64

Query: 64  PCAACKILRRRCVEKCVLAPYFPPTEPLKFTIAHRVFGASNIIKFLQELPESQRTDAVSS 123
           PCAACKILRRRCVEKCVLAPYFPPT+P+KFTIAHRVFGASNIIKFLQELPESQR DAVSS
Sbjct: 65  PCAACKILRRRCVEKCVLAPYFPPTDPIKFTIAHRVFGASNIIKFLQELPESQRADAVSS 124

Query: 124 MVYEANARLRDPVYGSAGAICQLQKQVSELQAQLAKARAEVANMQQQQANLLALICMEMR 183
           MVYEANAR+RDPVYG AGAICQLQKQVSELQAQLAKA+AEV NMQ QQANL+ALICMEM 
Sbjct: 125 MVYEANARIRDPVYGCAGAICQLQKQVSELQAQLAKAQAEVVNMQCQQANLVALICMEMS 184

Query: 184 QSPEP--VWPPQLIDTACFLDDATLSSPWEPLWT 207
           QS +   + P   +D +CF++D T  + WEPLWT
Sbjct: 185 QSQDQNMLQPQPHVDMSCFIEDNTFGTAWEPLWT 217

[Close]
BLAST of ClCG02G013910 vs. TrEMBL
Match: A0A0B2NUM7_GLYSO (LOB domain-containing protein 1 OS=Glycine soja GN=glysoja_000489 PE=4 SV=1)

HSP 1 Score: 291.6 bits (745), Expect = 7.6e-76
Identity = 152/210 (72.38%), Postives = 167/210 (79.52%), Query Frame = 1 

Query: 10  SPPTPITVPNPLSFSPMSSSSTA-----TNFASPPTSQPSS------PPPPAVVLSPCAA 69
           SPP PI +P  LS SP SSSS+      T F SP    PS+      PPPP VV+SPCAA
Sbjct: 13  SPPIPIHLPTMLSNSPPSSSSSPPSQSPTPFPSPSQGSPSAAPPSPPPPPPPVVVSPCAA 72

Query: 70  CKILRRRCVEKCVLAPYFPPTEPLKFTIAHRVFGASNIIKFLQELPESQRTDAVSSMVYE 129
           CKILRRRCVEKCVLAPYFPPT+PLKFTIAHRVFGASNIIKFLQELPESQR DAVSSMVYE
Sbjct: 73  CKILRRRCVEKCVLAPYFPPTDPLKFTIAHRVFGASNIIKFLQELPESQRADAVSSMVYE 132

Query: 130 ANARLRDPVYGSAGAICQLQKQVSELQAQLAKARAEVANMQQQQANLLALICMEMRQSPE 189
           ANAR+RDPVYG AGAICQLQKQVSELQAQLAKA+AEV NMQ QQANL+ALICMEM QS E
Sbjct: 133 ANARIRDPVYGCAGAICQLQKQVSELQAQLAKAQAEVVNMQCQQANLVALICMEMSQSQE 192

Query: 190 P--VWPPQLIDTACFLDDATLSSPWEPLWT 207
              + P   +D +CF++D +  + WEPLWT
Sbjct: 193 QHVLQPQPHVDMSCFIEDNSFGTAWEPLWT 222

[Close]
BLAST of ClCG02G013910 vs. TrEMBL
Match: I1NHD1_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_20G177600 PE=4 SV=1)

HSP 1 Score: 291.6 bits (745), Expect = 7.6e-76
Identity = 152/210 (72.38%), Postives = 167/210 (79.52%), Query Frame = 1 

Query: 10  SPPTPITVPNPLSFSPMSSSSTA-----TNFASPPTSQPSS------PPPPAVVLSPCAA 69
           SPP PI +P  LS SP SSSS+      T F SP    PS+      PPPP VV+SPCAA
Sbjct: 13  SPPIPIHLPTMLSNSPPSSSSSPPSQSPTPFPSPSQGSPSAAPPSPPPPPPPVVVSPCAA 72

Query: 70  CKILRRRCVEKCVLAPYFPPTEPLKFTIAHRVFGASNIIKFLQELPESQRTDAVSSMVYE 129
           CKILRRRCVEKCVLAPYFPPT+PLKFTIAHRVFGASNIIKFLQELPESQR DAVSSMVYE
Sbjct: 73  CKILRRRCVEKCVLAPYFPPTDPLKFTIAHRVFGASNIIKFLQELPESQRADAVSSMVYE 132

Query: 130 ANARLRDPVYGSAGAICQLQKQVSELQAQLAKARAEVANMQQQQANLLALICMEMRQSPE 189
           ANAR+RDPVYG AGAICQLQKQVSELQAQLAKA+AEV NMQ QQANL+ALICMEM QS E
Sbjct: 133 ANARIRDPVYGCAGAICQLQKQVSELQAQLAKAQAEVVNMQCQQANLVALICMEMSQSQE 192

Query: 190 P--VWPPQLIDTACFLDDATLSSPWEPLWT 207
              + P   +D +CF++D +  + WEPLWT
Sbjct: 193 QHVLQPQPHVDMSCFIEDNSFGTAWEPLWT 222

[Close]
BLAST of ClCG02G013910 vs. TAIR10
Match: AT1G07900.1 (AT1G07900.1 LOB domain-containing protein 1)

HSP 1 Score: 225.7 bits (574), Expect = 2.6e-59
Identity = 123/189 (65.08%), Postives = 140/189 (74.07%), Query Frame = 1 

Query: 26  MSSSSTATNFASPPTSQPSSPPP---PAVVLSPCAACKILRRRCVEKCVLAPYFPPTEPL 85
           M S S A+   +P  S  SSPPP   P VVLSPCAACKILRRRC E+CVLAPYFPPT+P 
Sbjct: 1   MESKSDASVATTPIISSSSSPPPSLSPRVVLSPCAACKILRRRCAERCVLAPYFPPTDPA 60

Query: 86  KFTIAHRVFGASNIIKFLQELPESQRTDAVSSMVYEANARLRDPVYGSAGAICQLQKQVS 145
           KFTIAHRVFGASNIIKFLQELPESQRTDAV+SMVYEA AR+RDPVYG AGAI  LQ+QVS
Sbjct: 61  KFTIAHRVFGASNIIKFLQELPESQRTDAVNSMVYEAEARIRDPVYGCAGAIYHLQRQVS 120

Query: 146 ELQAQLAKARAEVANMQQQQANLLALIC-MEMRQSPEPVWPPQLIDTACFLDDATLSSP- 205
           ELQAQLAKA+ E+ NMQ Q++NLL LI  M+ +Q  E        +   FL+D + ++  
Sbjct: 121 ELQAQLAKAQVEMVNMQFQRSNLLELIYNMDQQQKQEQDNMSFESNDLGFLEDKSNTNSS 180

Query: 206 ---WEPLWT 207
              W+PLWT
Sbjct: 181 MLWWDPLWT 189

[Close]
BLAST of ClCG02G013910 vs. TAIR10
Match: AT2G28500.1 (AT2G28500.1 LOB domain-containing protein 11)

HSP 1 Score: 214.5 bits (545), Expect = 6.0e-56
Identity = 113/166 (68.07%), Postives = 125/166 (75.30%), Query Frame = 1 

Query: 4   VAKCSNSPPTPITVPNPLSFSPMSSSSTATNFASPPTSQPSSPPPPAVVLSPCAACKILR 63
           VAK + +  TP+  P+P S SP            PP   P  PP P VVLSPCAACKILR
Sbjct: 18  VAKVTETT-TPVNSPSPTS-SP------------PPPPSPQQPPQPPVVLSPCAACKILR 77

Query: 64  RRCVEKCVLAPYFPPTEPLKFTIAHRVFGASNIIKFLQELPESQRTDAVSSMVYEANARL 123
           RRC +KCVLAPYFPPT+P KFTIAHRVFGASNIIKFLQELPESQRTDAV+SMVYEA AR+
Sbjct: 78  RRCADKCVLAPYFPPTDPAKFTIAHRVFGASNIIKFLQELPESQRTDAVNSMVYEAGARM 137

Query: 124 RDPVYGSAGAICQLQKQVSELQAQLAKARAEVANMQQQQANLLALI 170
           RDPVYG AGAI  LQ+QVSELQAQLAK + E+  MQ Q+++LL LI
Sbjct: 138 RDPVYGCAGAIYHLQRQVSELQAQLAKTQVELVGMQLQRSSLLELI 169

[Close]
BLAST of ClCG02G013910 vs. TAIR10
Match: AT1G31320.1 (AT1G31320.1 LOB domain-containing protein 4)

HSP 1 Score: 152.5 bits (384), Expect = 2.8e-37
Identity = 74/110 (67.27%), Postives = 85/110 (77.27%), Query Frame = 1 

Query: 54  SPCAACKILRRRCVEKCVLAPYFPPTEPLKFTIAHRVFGASNIIKFLQELPESQRTDAVS 113
           SPCAACK+LRRRC + CV +PYFP  EP KF   HRVFGASN+ K LQELP  QR DAVS
Sbjct: 12  SPCAACKLLRRRCAQDCVFSPYFPADEPQKFANVHRVFGASNVNKMLQELPIHQRGDAVS 71

Query: 114 SMVYEANARLRDPVYGSAGAICQLQKQVSELQAQLAKARAEVANMQQQQA 164
           SMVYEANAR+RDPVYG  GAI  LQ+Q+  LQAQLA A+AEV +++ +Q+
Sbjct: 72  SMVYEANARVRDPVYGCVGAISSLQQQIDVLQAQLALAQAEVVHLRVRQS 121

[Close]
BLAST of ClCG02G013910 vs. TAIR10
Match: AT2G30130.1 (AT2G30130.1 Lateral organ boundaries (LOB) domain family protein)

HSP 1 Score: 152.1 bits (383), Expect = 3.6e-37
Identity = 71/108 (65.74%), Postives = 84/108 (77.78%), Query Frame = 1 

Query: 54  SPCAACKILRRRCVEKCVLAPYFPPTEPLKFTIAHRVFGASNIIKFLQELPESQRTDAVS 113
           SPCA+CK+LRRRC + C+ APYFPP +P KF I H+VFGASN+ K LQELP  QR DAV+
Sbjct: 7   SPCASCKLLRRRCAKDCIFAPYFPPDDPHKFAIVHKVFGASNVSKMLQELPVHQRADAVN 66

Query: 114 SMVYEANARLRDPVYGSAGAICQLQKQVSELQAQLAKARAEVANMQQQ 162
           S+V+EANAR+RDPVYG  GAI  LQ QVS+LQ QLA A+AE+  +Q Q
Sbjct: 67  SLVFEANARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQ 114

[Close]
BLAST of ClCG02G013910 vs. TAIR10
Match: AT2G40470.1 (AT2G40470.1 LOB domain-containing protein 15)

HSP 1 Score: 149.1 bits (375), Expect = 3.1e-36
Identity = 69/120 (57.50%), Postives = 85/120 (70.83%), Query Frame = 1 

Query: 44  SSPPPPAVVLSPCAACKILRRRCVEKCVLAPYFPPTEPLKFTIAHRVFGASNIIKFLQEL 103
           S PP     ++PCAACK+LRRRC ++C  +PYF P EP KF   H+VFGASN+ K L E+
Sbjct: 34  SGPPGTLNTITPCAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVSKMLMEV 93

Query: 104 PESQRTDAVSSMVYEANARLRDPVYGSAGAICQLQKQVSELQAQLAKARAEVANMQQQQA 163
           PESQR DA +S+VYEAN RLRDPVYG  GAI  LQ+QV  LQA+L   R+E+   +Q++A
Sbjct: 94  PESQRADAANSLVYEANVRLRDPVYGCMGAISALQQQVQALQAELTAVRSEILKYKQREA 153

[Close]
BLAST of ClCG02G013910 vs. NCBI nr
Match: gi|449451890|ref|XP_004143693.1| (PREDICTED: LOB domain-containing protein 1-like [Cucumis sativus])

HSP 1 Score: 374.0 bits (959), Expect = 1.7e-100
Identity = 190/211 (90.05%), Postives = 194/211 (91.94%), Query Frame = 1 

Query: 1   MAYVAKCSN-SPPTPITVPN----PLSFSPMSSSSTATNFASPPTSQPSSPPPPAVVLSP 60
           MAYVAKC+N SPPTPI+V N    PLSFSPMSSS        PPTSQPSSPPPPAVVLSP
Sbjct: 1   MAYVAKCTNNSPPTPISVNNNPNNPLSFSPMSSS--------PPTSQPSSPPPPAVVLSP 60

Query: 61  CAACKILRRRCVEKCVLAPYFPPTEPLKFTIAHRVFGASNIIKFLQELPESQRTDAVSSM 120
           CAACKILRRRCVEKCVLAPYFPPT+PLKFTIAHRVFGASNIIKFLQELPE QRTDAVSSM
Sbjct: 61  CAACKILRRRCVEKCVLAPYFPPTDPLKFTIAHRVFGASNIIKFLQELPECQRTDAVSSM 120

Query: 121 VYEANARLRDPVYGSAGAICQLQKQVSELQAQLAKARAEVANMQQQQANLLALICMEMRQ 180
           VYEANARLRDPVYGSAGAICQLQKQVSELQAQLAKARAEVANMQQQQANLLALICMEMRQ
Sbjct: 121 VYEANARLRDPVYGSAGAICQLQKQVSELQAQLAKARAEVANMQQQQANLLALICMEMRQ 180

Query: 181 SPEPVWPPQLIDTACFLDDATLSSPWEPLWT 207
           SPEPVW PQL+DT CFLDDATLSSPWEPLWT
Sbjct: 181 SPEPVWQPQLVDTTCFLDDATLSSPWEPLWT 203

[Close]
BLAST of ClCG02G013910 vs. NCBI nr
Match: gi|659090144|ref|XP_008445860.1| (PREDICTED: LOB domain-containing protein 1-like [Cucumis melo])

HSP 1 Score: 370.2 bits (949), Expect = 2.4e-99
Identity = 188/211 (89.10%), Postives = 192/211 (91.00%), Query Frame = 1 

Query: 1   MAYVAKCSN-SPPTPITVPN----PLSFSPMSSSSTATNFASPPTSQPSSPPPPAVVLSP 60
           MAYVAKC+N SPPTPI+  N    PLSFSPMSSS        PPTSQPSSPPPP VVLSP
Sbjct: 1   MAYVAKCTNNSPPTPISFNNNPNNPLSFSPMSSS--------PPTSQPSSPPPPPVVLSP 60

Query: 61  CAACKILRRRCVEKCVLAPYFPPTEPLKFTIAHRVFGASNIIKFLQELPESQRTDAVSSM 120
           CAACKILRRRCVEKCVLAPYFPPT+PLKFTIAHRVFGASNIIKFLQELPE QRTDAVSSM
Sbjct: 61  CAACKILRRRCVEKCVLAPYFPPTDPLKFTIAHRVFGASNIIKFLQELPECQRTDAVSSM 120

Query: 121 VYEANARLRDPVYGSAGAICQLQKQVSELQAQLAKARAEVANMQQQQANLLALICMEMRQ 180
           VYEANARLRDPVYGSAGAICQLQKQVSELQAQLAKARAEVANMQQQQANLLALICMEMRQ
Sbjct: 121 VYEANARLRDPVYGSAGAICQLQKQVSELQAQLAKARAEVANMQQQQANLLALICMEMRQ 180

Query: 181 SPEPVWPPQLIDTACFLDDATLSSPWEPLWT 207
           SPEPVW PQL+DT CFLDDATLSSPWEPLWT
Sbjct: 181 SPEPVWQPQLVDTTCFLDDATLSSPWEPLWT 203

[Close]
BLAST of ClCG02G013910 vs. NCBI nr
Match: gi|700195287|gb|KGN50464.1| (hypothetical protein Csa_5G175870 [Cucumis sativus])

HSP 1 Score: 340.9 bits (873), Expect = 1.6e-90
Identity = 165/171 (96.49%), Postives = 168/171 (98.25%), Query Frame = 1 

Query: 36  ASPPTSQPSSPPPPAVVLSPCAACKILRRRCVEKCVLAPYFPPTEPLKFTIAHRVFGASN 95
           +SPPTSQPSSPPPPAVVLSPCAACKILRRRCVEKCVLAPYFPPT+PLKFTIAHRVFGASN
Sbjct: 3   SSPPTSQPSSPPPPAVVLSPCAACKILRRRCVEKCVLAPYFPPTDPLKFTIAHRVFGASN 62

Query: 96  IIKFLQELPESQRTDAVSSMVYEANARLRDPVYGSAGAICQLQKQVSELQAQLAKARAEV 155
           IIKFLQELPE QRTDAVSSMVYEANARLRDPVYGSAGAICQLQKQVSELQAQLAKARAEV
Sbjct: 63  IIKFLQELPECQRTDAVSSMVYEANARLRDPVYGSAGAICQLQKQVSELQAQLAKARAEV 122

Query: 156 ANMQQQQANLLALICMEMRQSPEPVWPPQLIDTACFLDDATLSSPWEPLWT 207
           ANMQQQQANLLALICMEMRQSPEPVW PQL+DT CFLDDATLSSPWEPLWT
Sbjct: 123 ANMQQQQANLLALICMEMRQSPEPVWQPQLVDTTCFLDDATLSSPWEPLWT 173

[Close]
BLAST of ClCG02G013910 vs. NCBI nr
Match: gi|593686006|ref|XP_007143674.1| (hypothetical protein PHAVU_007G092000g [Phaseolus vulgaris])

HSP 1 Score: 293.1 bits (749), Expect = 3.7e-76
Identity = 154/205 (75.12%), Postives = 169/205 (82.44%), Query Frame = 1 

Query: 12  PTPITVPNPLSFSPMSSSSTA-----TNFASP---PTSQPSSPPPPAVVLSPCAACKILR 71
           P PI VP+ LS SP SSSS+      T F SP   P++ P SPPPP VV+SPCAACKILR
Sbjct: 15  PIPIHVPSMLSNSPPSSSSSPPSHSPTPFPSPSPSPSAAPPSPPPP-VVVSPCAACKILR 74

Query: 72  RRCVEKCVLAPYFPPTEPLKFTIAHRVFGASNIIKFLQELPESQRTDAVSSMVYEANARL 131
           RRCVEKCVLAPYFPPT+PLKFTIAHRVFGASNIIKFLQELPESQR DAVSSMVYEANAR+
Sbjct: 75  RRCVEKCVLAPYFPPTDPLKFTIAHRVFGASNIIKFLQELPESQRADAVSSMVYEANARI 134

Query: 132 RDPVYGSAGAICQLQKQVSELQAQLAKARAEVANMQQQQANLLALICMEMRQSPEP--VW 191
           RDPVYG AGAICQLQKQVSELQAQLAKA+AE+ NMQ QQANL+ALICMEM QS E   V 
Sbjct: 135 RDPVYGCAGAICQLQKQVSELQAQLAKAQAELVNMQCQQANLVALICMEMSQSQEQHVVQ 194

Query: 192 PPQLIDTACFLDDATLSSPWEPLWT 207
           P  L+D +CF++D T  + WEPLWT
Sbjct: 195 PQPLVDMSCFIEDNTFGTAWEPLWT 218

[Close]
BLAST of ClCG02G013910 vs. NCBI nr
Match: gi|1012363571|gb|KYP74754.1| (LOB domain-containing protein 1 [Cajanus cajan])

HSP 1 Score: 292.0 bits (746), Expect = 8.3e-76
Identity = 154/214 (71.96%), Postives = 170/214 (79.44%), Query Frame = 1 

Query: 4   VAKCSNSPPTPITVPNPLSFSPMSSSSTA-----TNFASP----PTSQPSSPPPPAVVLS 63
           V   + SPP PI VP  LS SP SSSS+      T F SP    P + P SPPPP VV+S
Sbjct: 5   VKTTTTSPPIPIHVPTMLSNSPPSSSSSPPSQSHTPFPSPSQGSPPAAPPSPPPP-VVVS 64

Query: 64  PCAACKILRRRCVEKCVLAPYFPPTEPLKFTIAHRVFGASNIIKFLQELPESQRTDAVSS 123
           PCAACKILRRRCVEKCVLAPYFPPT+P+KFTIAHRVFGASNIIKFLQELPESQR DAVSS
Sbjct: 65  PCAACKILRRRCVEKCVLAPYFPPTDPIKFTIAHRVFGASNIIKFLQELPESQRADAVSS 124

Query: 124 MVYEANARLRDPVYGSAGAICQLQKQVSELQAQLAKARAEVANMQQQQANLLALICMEMR 183
           MVYEANAR+RDPVYG AGAICQLQKQVSELQAQLAKA+AEV NMQ QQANL+ALICMEM 
Sbjct: 125 MVYEANARIRDPVYGCAGAICQLQKQVSELQAQLAKAQAEVVNMQCQQANLVALICMEMS 184

Query: 184 QSPEP--VWPPQLIDTACFLDDATLSSPWEPLWT 207
           QS +   + P   +D +CF++D T  + WEPLWT
Sbjct: 185 QSQDQNMLQPQPHVDMSCFIEDNTFGTAWEPLWT 217

The following BLAST results are available for this feature:
BLAST of ClCG02G013910 vs. Swiss-Prot
Match NameE-valueIdentityDescription
LBD1_ARATH4.6e-5865.08LOB domain-containing protein 1 OS=Arabidopsis thaliana GN=LBD1 PE=2 SV=1[more]
LBD11_ARATH1.1e-5468.07LOB domain-containing protein 11 OS=Arabidopsis thaliana GN=LBD11 PE=2 SV=2[more]
LBD4_ARATH4.9e-3667.27LOB domain-containing protein 4 OS=Arabidopsis thaliana GN=LBD4 PE=2 SV=1[more]
LBD12_ARATH6.5e-3665.74LOB domain-containing protein 12 OS=Arabidopsis thaliana GN=LBD12 PE=2 SV=2[more]
LBD15_ARATH5.5e-3557.50LOB domain-containing protein 15 OS=Arabidopsis thaliana GN=LBD15 PE=2 SV=2[more]
BLAST of ClCG02G013910 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KNK9_CUCSA1.1e-9096.49Uncharacterized protein OS=Cucumis sativus GN=Csa_5G175870 PE=4 SV=1[more]
V7BFQ1_PHAVU2.6e-7675.12Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_007G092000g PE=4 SV=1[more]
A0A151U637_CAJCA5.8e-7671.96LOB domain-containing protein 1 OS=Cajanus cajan GN=KK1_007445 PE=4 SV=1[more]
A0A0B2NUM7_GLYSO7.6e-7672.38LOB domain-containing protein 1 OS=Glycine soja GN=glysoja_000489 PE=4 SV=1[more]
I1NHD1_SOYBN7.6e-7672.38Uncharacterized protein OS=Glycine max GN=GLYMA_20G177600 PE=4 SV=1[more]
BLAST of ClCG02G013910 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G07900.12.6e-5965.08 LOB domain-containing protein 1[more]
AT2G28500.16.0e-5668.07 LOB domain-containing protein 11[more]
AT1G31320.12.8e-3767.27 LOB domain-containing protein 4[more]
AT2G30130.13.6e-3765.74 Lateral organ boundaries (LOB) domain family protein[more]
AT2G40470.13.1e-3657.50 LOB domain-containing protein 15[more]
BLAST of ClCG02G013910 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449451890|ref|XP_004143693.1|1.7e-10090.05PREDICTED: LOB domain-containing protein 1-like [Cucumis sativus][more]
gi|659090144|ref|XP_008445860.1|2.4e-9989.10PREDICTED: LOB domain-containing protein 1-like [Cucumis melo][more]
gi|700195287|gb|KGN50464.1|1.6e-9096.49hypothetical protein Csa_5G175870 [Cucumis sativus][more]
gi|593686006|ref|XP_007143674.1|3.7e-7675.12hypothetical protein PHAVU_007G092000g [Phaseolus vulgaris][more]
gi|1012363571|gb|KYP74754.1|8.3e-7671.96LOB domain-containing protein 1 [Cajanus cajan][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR004883LOB
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006536 glutamate metabolic process
biological_process GO:0006206 pyrimidine nucleobase metabolic process
biological_process GO:0008150 biological_process
cellular_component GO:0005951 carbamoyl-phosphate synthase complex
cellular_component GO:0005575 cellular_component
molecular_function GO:0004088 carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
molecular_function GO:0003674 molecular_function
molecular_function GO:0016874 ligase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG02G013910.1ClCG02G013910.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004883Lateral organ boundaries, LOBPFAMPF03195DUF260coord: 55..152
score: 6.8
IPR004883Lateral organ boundaries, LOBPROFILEPS50891LOBcoord: 54..155
score: 2
NoneNo IPR availableunknownCoilCoilcoord: 134..168
scor
NoneNo IPR availablePANTHERPTHR31301FAMILY NOT NAMEDcoord: 29..205
score: 8.2E
NoneNo IPR availablePANTHERPTHR31301:SF14LOB DOMAIN-CONTAINING PROTEIN 1-RELATEDcoord: 29..205
score: 8.2E