Csa3G117940 (gene) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
Legend: CDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATTTGAATCCCCCTCTCTGTTGTCTATGCGGCGACGTCGGTTTTCCAGCCAAGCTCTTCCGCTGCACCAATTGCTCCAACCGATTTCAGCACTCGTAAGACTCTCTCTCTCACACACACATATGCACACACCCTCTTCTTTATATATATTCTTTCGCTTTTGATTTCATCAACAACTCTCTAATAGCCTGTCAATTTTTCAGTTACTGTAGTAACTACTACTGCGGGGAATCGGGTGATGCAACAATTCGAGTATGTGATTGGTGCCGAAGTGAACAAAGAACCTGCCGTCCTGCCTTTGCAAGTACAACATCCCAAAAGAGTAACAAAATTACAGAAAGAAGAAGCTCTGCGGTGGGACTGCCTTCCCCTCGCCCTGCTCCACGCCGATACAAGCTTCTCAAAGATGTCATGTGTTAGATAACTTTACATTAAACCAACCAAAAATACCCTTTTTCATTTTTC ATGGATTTGAATCCCCCTCTCTGTTGTCTATGCGGCGACGTCGGTTTTCCAGCCAAGCTCTTCCGCTGCACCAATTGCTCCAACCGATTTCAGCACTCTTACTGTAGTAACTACTACTGCGGGGAATCGGGTGATGCAACAATTCGAGTATGTGATTGGTGCCGAAGTGAACAAAGAACCTGCCGTCCTGCCTTTGCAAGTACAACATCCCAAAAGAGTAACAAAATTACAGAAAGAAGAAGCTCTGCGGTGGGACTGCCTTCCCCTCGCCCTGCTCCACGCCGATACAAGCTTCTCAAAGATGTCATGTGTTAG ATGGATTTGAATCCCCCTCTCTGTTGTCTATGCGGCGACGTCGGTTTTCCAGCCAAGCTCTTCCGCTGCACCAATTGCTCCAACCGATTTCAGCACTCTTACTGTAGTAACTACTACTGCGGGGAATCGGGTGATGCAACAATTCGAGTATGTGATTGGTGCCGAAGTGAACAAAGAACCTGCCGTCCTGCCTTTGCAAGTACAACATCCCAAAAGAGTAACAAAATTACAGAAAGAAGAAGCTCTGCGGTGGGACTGCCTTCCCCTCGCCCTGCTCCACGCCGATACAAGCTTCTCAAAGATGTCATGTGTTAG MDLNPPLCCLCGDVGFPAKLFRCTNCSNRFQHSYCSNYYCGESGDATIRVCDWCRSEQRTCRPAFASTTSQKSNKITERRSSAVGLPSPRPAPRRYKLLKDVMC*
BLAST of Csa3G117940 vs. TrEMBL
Match: A0A0A0L5P1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G117940 PE=4 SV=1) HSP 1 Score: 230.3 bits (586), Expect = 1.1e-57 Identity = 104/104 (100.00%), Postives = 104/104 (100.00%), Query Frame = 1
BLAST of Csa3G117940 vs. TrEMBL
Match: A0A061DUE3_THECC (Late cornified envelope protein 1E OS=Theobroma cacao GN=TCM_005618 PE=4 SV=1) HSP 1 Score: 114.4 bits (285), Expect = 8.5e-23 Identity = 58/119 (48.74%), Postives = 70/119 (58.82%), Query Frame = 1
BLAST of Csa3G117940 vs. TrEMBL
Match: A0A022RQV6_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a016574mg PE=4 SV=1) HSP 1 Score: 112.8 bits (281), Expect = 2.5e-22 Identity = 55/107 (51.40%), Postives = 68/107 (63.55%), Query Frame = 1
BLAST of Csa3G117940 vs. TrEMBL
Match: B9GPA9_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0002s14350g PE=4 SV=1) HSP 1 Score: 112.1 bits (279), Expect = 4.2e-22 Identity = 58/127 (45.67%), Postives = 71/127 (55.91%), Query Frame = 1
BLAST of Csa3G117940 vs. TrEMBL
Match: A0A067K1B1_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14584 PE=4 SV=1) HSP 1 Score: 111.3 bits (277), Expect = 7.2e-22 Identity = 57/121 (47.11%), Postives = 68/121 (56.20%), Query Frame = 1
BLAST of Csa3G117940 vs. TAIR10
Match: AT3G60520.1 (AT3G60520.1 unknown protein) HSP 1 Score: 109.4 bits (272), Expect = 1.4e-24 Identity = 60/130 (46.15%), Postives = 75/130 (57.69%), Query Frame = 1
BLAST of Csa3G117940 vs. TAIR10
Match: AT1G02070.1 (AT1G02070.1 unknown protein) HSP 1 Score: 91.3 bits (225), Expect = 3.9e-19 Identity = 54/130 (41.54%), Postives = 64/130 (49.23%), Query Frame = 1
BLAST of Csa3G117940 vs. NCBI nr
Match: gi|449433002|ref|XP_004134287.1| (PREDICTED: uncharacterized protein LOC101222685 [Cucumis sativus]) HSP 1 Score: 230.3 bits (586), Expect = 1.5e-57 Identity = 104/104 (100.00%), Postives = 104/104 (100.00%), Query Frame = 1
BLAST of Csa3G117940 vs. NCBI nr
Match: gi|659074774|ref|XP_008437789.1| (PREDICTED: uncharacterized protein LOC103483122 [Cucumis melo]) HSP 1 Score: 203.4 bits (516), Expect = 2.0e-49 Identity = 95/105 (90.48%), Postives = 96/105 (91.43%), Query Frame = 1
BLAST of Csa3G117940 vs. NCBI nr
Match: gi|590723505|ref|XP_007052203.1| (Late cornified envelope protein 1E [Theobroma cacao]) HSP 1 Score: 114.4 bits (285), Expect = 1.2e-22 Identity = 58/119 (48.74%), Postives = 70/119 (58.82%), Query Frame = 1
BLAST of Csa3G117940 vs. NCBI nr
Match: gi|848861144|ref|XP_012831396.1| (PREDICTED: uncharacterized protein LOC105952400 [Erythranthe guttata]) HSP 1 Score: 112.8 bits (281), Expect = 3.5e-22 Identity = 55/107 (51.40%), Postives = 68/107 (63.55%), Query Frame = 1
BLAST of Csa3G117940 vs. NCBI nr
Match: gi|224067608|ref|XP_002302513.1| (hypothetical protein POPTR_0002s14350g [Populus trichocarpa]) HSP 1 Score: 112.1 bits (279), Expect = 6.0e-22 Identity = 58/127 (45.67%), Postives = 71/127 (55.91%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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