CsGy4G006310 (gene) Cucumber (Gy14) v2

NameCsGy4G006310
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
Descriptionhypothetical protein
LocationChr4 : 4561757 .. 4562185 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATCAGTAACTTGATTTCAAGCTTGAACAAAAAGCTACAGGCTGTTGAAATCAGTAGCCGCTGCAAACGAACGAAGAAGACGGCTTACGTATACAGAGACAATCTCACCAAGAAGAACCACTCACCACCCTCGTCATCGTCCTCACCACAGCACCAGCCGGAGGAGATCAAGAAAGTGAAGAAGAGAGTGAGATTTGCTGATACGGAACCAGTGATAATCGCCATTAGTACCGACAGAGAGGAGGAGGAGTTGGAGGTTGAAACAGAGAAGAAAGTAGTGAGAATTACGGTGAAATTGACGAAACAAGAAGCGAATCGAATGCTTTCGAGGTGCTCCAATGGTGGCGTTCTTGAATTCGGAGATGTGGCTTCTGAACTCATGAGGATTCCTCCAACTAGAGTTCGTTCATCTTTGGTGGCGAATTGA

mRNA sequence

ATGATCAGTAACTTGATTTCAAGCTTGAACAAAAAGCTACAGGCTGTTGAAATCAGTAGCCGCTGCAAACGAACGAAGAAGACGGCTTACGTATACAGAGACAATCTCACCAAGAAGAACCACTCACCACCCTCGTCATCGTCCTCACCACAGCACCAGCCGGAGGAGATCAAGAAAGTGAAGAAGAGAGTGAGATTTGCTGATACGGAACCAGTGATAATCGCCATTAGTACCGACAGAGAGGAGGAGGAGTTGGAGGTTGAAACAGAGAAGAAAGTAGTGAGAATTACGGTGAAATTGACGAAACAAGAAGCGAATCGAATGCTTTCGAGGTGCTCCAATGGTGGCGTTCTTGAATTCGGAGATGTGGCTTCTGAACTCATGAGGATTCCTCCAACTAGAGTTCGTTCATCTTTGGTGGCGAATTGA

Coding sequence (CDS)

ATGATCAGTAACTTGATTTCAAGCTTGAACAAAAAGCTACAGGCTGTTGAAATCAGTAGCCGCTGCAAACGAACGAAGAAGACGGCTTACGTATACAGAGACAATCTCACCAAGAAGAACCACTCACCACCCTCGTCATCGTCCTCACCACAGCACCAGCCGGAGGAGATCAAGAAAGTGAAGAAGAGAGTGAGATTTGCTGATACGGAACCAGTGATAATCGCCATTAGTACCGACAGAGAGGAGGAGGAGTTGGAGGTTGAAACAGAGAAGAAAGTAGTGAGAATTACGGTGAAATTGACGAAACAAGAAGCGAATCGAATGCTTTCGAGGTGCTCCAATGGTGGCGTTCTTGAATTCGGAGATGTGGCTTCTGAACTCATGAGGATTCCTCCAACTAGAGTTCGTTCATCTTTGGTGGCGAATTGA

Protein sequence

MISNLISSLNKKLQAVEISSRCKRTKKTAYVYRDNLTKKNHSPPSSSSSPQHQPEEIKKVKKRVRFADTEPVIIAISTDREEEELEVETEKKVVRITVKLTKQEANRMLSRCSNGGVLEFGDVASELMRIPPTRVRSSLVAN
BLAST of CsGy4G006310 vs. NCBI nr
Match: XP_011653217.1 (PREDICTED: uncharacterized protein LOC105435188 [Cucumis sativus] >KGN53407.1 hypothetical protein Csa_4G052080 [Cucumis sativus])

HSP 1 Score: 229.2 bits (583), Expect = 8.9e-57
Identity = 142/142 (100.00%), Postives = 142/142 (100.00%), Query Frame = 0

Query: 1   MISNLISSLNKKLQAVEISSRCKRTKKTAYVYRDNLTKKNHSPPSSXXXPQHQPEEIKKV 60
           MISNLISSLNKKLQAVEISSRCKRTKKTAYVYRDNLTKKNHSPPSSXXXPQHQPEEIKKV
Sbjct: 1   MISNLISSLNKKLQAVEISSRCKRTKKTAYVYRDNLTKKNHSPPSSXXXPQHQPEEIKKV 60

Query: 61  KKRVRFADTEPVIIAXXXXXXXXXXXXXXXXKVVRITVKLTKQEANRMLSRCSNGGVLEF 120
           KKRVRFADTEPVIIAXXXXXXXXXXXXXXXXKVVRITVKLTKQEANRMLSRCSNGGVLEF
Sbjct: 61  KKRVRFADTEPVIIAXXXXXXXXXXXXXXXXKVVRITVKLTKQEANRMLSRCSNGGVLEF 120

Query: 121 GDVASELMRIPPTRVRSSLVAN 143
           GDVASELMRIPPTRVRSSLVAN
Sbjct: 121 GDVASELMRIPPTRVRSSLVAN 142

BLAST of CsGy4G006310 vs. NCBI nr
Match: XP_008451951.1 (PREDICTED: uncharacterized protein LOC103493098 [Cucumis melo])

HSP 1 Score: 203.0 bits (515), Expect = 6.8e-49
Identity = 125/142 (88.03%), Postives = 128/142 (90.14%), Query Frame = 0

Query: 1   MISNLISSLNKKLQAVEISSRCKRTKKTAYVYRDNLTKKNHSPPSSXXXPQHQPEEIKKV 60
           MISNLISSLNKKLQAVEIS+RCKRTKKT YVYRD+LTKK HSPP S   PQHQP EIKKV
Sbjct: 1   MISNLISSLNKKLQAVEISNRCKRTKKTTYVYRDDLTKKKHSPPLSSSSPQHQPAEIKKV 60

Query: 61  KKRVRFADTEPVIIAXXXXXXXXXXXXXXXXKVVRITVKLTKQEANRMLSRCSNGGVLEF 120
           KKRVRFADTEPVIIA   XXXXXXXXXXXXX  VRITVKLTKQEANRMLSRCSN GVLEF
Sbjct: 61  KKRVRFADTEPVIIA--IXXXXXXXXXXXXXXXVRITVKLTKQEANRMLSRCSNDGVLEF 120

Query: 121 GDVASELMRIPPTRVRSSLVAN 143
           GDVASEL+RIPPTRV SSLVAN
Sbjct: 121 GDVASELLRIPPTRVSSSLVAN 140

BLAST of CsGy4G006310 vs. NCBI nr
Match: XP_022985430.1 (uncharacterized protein LOC111483436 [Cucurbita maxima])

HSP 1 Score: 161.0 bits (406), Expect = 3.0e-36
Identity = 96/139 (69.06%), Postives = 105/139 (75.54%), Query Frame = 0

Query: 1   MISNLISSLNKKLQAVEISSRCKRTKKTAYVYRDNLTKKNHSPPSSXXXPQHQPEEIKKV 60
           MI NLISSLNKKLQAVEIS+RC+RTKKT  VYR +++KK    P S    Q +P EI+KV
Sbjct: 1   MIGNLISSLNKKLQAVEISNRCRRTKKTTNVYRRDMSKKKQ--PQSPSPSQGKP-EIEKV 60

Query: 61  KKRVRFADTEPVIIAXXXXXXXXXXXXXXXXKVVRITVKLTKQEANRMLSRCSNGGVLEF 120
           KKRVRFADTEPVIIA                KVVRITVKLTKQEANRMLSRCS+GGVLEF
Sbjct: 61  KKRVRFADTEPVIIA--IDREERSTEEETEKKVVRITVKLTKQEANRMLSRCSDGGVLEF 120

Query: 121 GDVASELMRIPPTRVRSSL 140
           GDVASELMRIP  RV SS+
Sbjct: 121 GDVASELMRIPAARVSSSM 134

BLAST of CsGy4G006310 vs. NCBI nr
Match: XP_023522331.1 (uncharacterized protein LOC111786247 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 161.0 bits (406), Expect = 3.0e-36
Identity = 95/139 (68.35%), Postives = 102/139 (73.38%), Query Frame = 0

Query: 1   MISNLISSLNKKLQAVEISSRCKRTKKTAYVYRDNLTKKNHSPPSSXXXPQHQPEEIKKV 60
           MI NLISSLNKKLQAVEIS+RC+RTKKT  VYR +++KK      S   P     EI+KV
Sbjct: 1   MIGNLISSLNKKLQAVEISNRCRRTKKTTNVYRGDMSKKKQPQLPSQGKP-----EIEKV 60

Query: 61  KKRVRFADTEPVIIAXXXXXXXXXXXXXXXXKVVRITVKLTKQEANRMLSRCSNGGVLEF 120
           KKRVRFADTEPVIIA                KVVRITVKLTKQEANRMLSRCSNGGVLEF
Sbjct: 61  KKRVRFADTEPVIIA--IDREERSTEEETEKKVVRITVKLTKQEANRMLSRCSNGGVLEF 120

Query: 121 GDVASELMRIPPTRVRSSL 140
           GDVASELMRIP  RV SS+
Sbjct: 121 GDVASELMRIPAARVSSSM 132

BLAST of CsGy4G006310 vs. NCBI nr
Match: XP_023552096.1 (uncharacterized protein LOC111809864 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 159.8 bits (403), Expect = 6.6e-36
Identity = 94/139 (67.63%), Postives = 102/139 (73.38%), Query Frame = 0

Query: 1   MISNLISSLNKKLQAVEISSRCKRTKKTAYVYRDNLTKKNHSPPSSXXXPQHQPEEIKKV 60
           MI NLISSLNKKLQAV+IS+RC+RTKKT  VYR +++KK      S   P     EI+KV
Sbjct: 1   MIGNLISSLNKKLQAVDISNRCRRTKKTTNVYRGDMSKKKQPQLPSQGKP-----EIEKV 60

Query: 61  KKRVRFADTEPVIIAXXXXXXXXXXXXXXXXKVVRITVKLTKQEANRMLSRCSNGGVLEF 120
           KKRVRFADTEPVIIA                KVVRITVKLTKQEANRMLSRCSNGGVLEF
Sbjct: 61  KKRVRFADTEPVIIA--IDREERSTEEETEKKVVRITVKLTKQEANRMLSRCSNGGVLEF 120

Query: 121 GDVASELMRIPPTRVRSSL 140
           GDVASELMRIP  RV SS+
Sbjct: 121 GDVASELMRIPAARVSSSM 132

BLAST of CsGy4G006310 vs. TAIR10
Match: AT4G23880.1 (unknown protein)

HSP 1 Score: 43.9 bits (102), Expect = 9.6e-05
Identity = 17/49 (34.69%), Postives = 33/49 (67.35%), Query Frame = 0

Query: 92  KVVRITVKLTKQEANRMLSRCSNGGVLEFGDVASELMRIPPTRVRSSLV 141
           +VVR+ +K+TK EA R+LS+C N  VL+   +  ++  +P  +++ ++V
Sbjct: 132 EVVRVKIKMTKHEAQRLLSKCKNDSVLKLEHLMDQIAHVPVHQLQVAMV 180

BLAST of CsGy4G006310 vs. TrEMBL
Match: tr|A0A0A0KYE1|A0A0A0KYE1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G052080 PE=4 SV=1)

HSP 1 Score: 229.2 bits (583), Expect = 5.9e-57
Identity = 142/142 (100.00%), Postives = 142/142 (100.00%), Query Frame = 0

Query: 1   MISNLISSLNKKLQAVEISSRCKRTKKTAYVYRDNLTKKNHSPPSSXXXPQHQPEEIKKV 60
           MISNLISSLNKKLQAVEISSRCKRTKKTAYVYRDNLTKKNHSPPSSXXXPQHQPEEIKKV
Sbjct: 1   MISNLISSLNKKLQAVEISSRCKRTKKTAYVYRDNLTKKNHSPPSSXXXPQHQPEEIKKV 60

Query: 61  KKRVRFADTEPVIIAXXXXXXXXXXXXXXXXKVVRITVKLTKQEANRMLSRCSNGGVLEF 120
           KKRVRFADTEPVIIAXXXXXXXXXXXXXXXXKVVRITVKLTKQEANRMLSRCSNGGVLEF
Sbjct: 61  KKRVRFADTEPVIIAXXXXXXXXXXXXXXXXKVVRITVKLTKQEANRMLSRCSNGGVLEF 120

Query: 121 GDVASELMRIPPTRVRSSLVAN 143
           GDVASELMRIPPTRVRSSLVAN
Sbjct: 121 GDVASELMRIPPTRVRSSLVAN 142

BLAST of CsGy4G006310 vs. TrEMBL
Match: tr|A0A1S3BS40|A0A1S3BS40_CUCME (uncharacterized protein LOC103493098 OS=Cucumis melo OX=3656 GN=LOC103493098 PE=4 SV=1)

HSP 1 Score: 203.0 bits (515), Expect = 4.5e-49
Identity = 125/142 (88.03%), Postives = 128/142 (90.14%), Query Frame = 0

Query: 1   MISNLISSLNKKLQAVEISSRCKRTKKTAYVYRDNLTKKNHSPPSSXXXPQHQPEEIKKV 60
           MISNLISSLNKKLQAVEIS+RCKRTKKT YVYRD+LTKK HSPP S   PQHQP EIKKV
Sbjct: 1   MISNLISSLNKKLQAVEISNRCKRTKKTTYVYRDDLTKKKHSPPLSSSSPQHQPAEIKKV 60

Query: 61  KKRVRFADTEPVIIAXXXXXXXXXXXXXXXXKVVRITVKLTKQEANRMLSRCSNGGVLEF 120
           KKRVRFADTEPVIIA   XXXXXXXXXXXXX  VRITVKLTKQEANRMLSRCSN GVLEF
Sbjct: 61  KKRVRFADTEPVIIA--IXXXXXXXXXXXXXXXVRITVKLTKQEANRMLSRCSNDGVLEF 120

Query: 121 GDVASELMRIPPTRVRSSLVAN 143
           GDVASEL+RIPPTRV SSLVAN
Sbjct: 121 GDVASELLRIPPTRVSSSLVAN 140

BLAST of CsGy4G006310 vs. TrEMBL
Match: tr|A0A0A0KZ22|A0A0A0KZ22_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G091930 PE=4 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 3.3e-15
Identity = 72/117 (61.54%), Postives = 75/117 (64.10%), Query Frame = 0

Query: 26  KKTAYVYRDNLTKKNHSPPSSXXXPQHQPEEIKKVKKRVRFADTEPVIIAXXXXXXXXXX 85
           KK  YVYRD+LTKKNHSPP  XXX                F D          XXXXXXX
Sbjct: 2   KKATYVYRDDLTKKNHSPPXXXXXXXXXXXXXXXXXXXXXFVD----------XXXXXXX 61

Query: 86  XXXXXXKVVRITVKLTKQEANRMLSRCSNGGVLEFGDVASELMRIPPTRVRSSLVAN 143
           XXXXXX    I VKL KQEAN+MLSRC NGGVLEFGDV  ELMRIPPTRV SSLV +
Sbjct: 62  XXXXXXXXXXIMVKLKKQEANQMLSRCFNGGVLEFGDVTFELMRIPPTRVSSSLVTS 108

BLAST of CsGy4G006310 vs. TrEMBL
Match: tr|K7KRX3|K7KRX3_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=102662341 PE=4 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 3.7e-11
Identity = 54/136 (39.71%), Postives = 71/136 (52.21%), Query Frame = 0

Query: 1   MISNLISSLNKKLQAVEISSRCKRTKKTAYVYRDNLTKKNHSPPSSXXXPQHQPEEIKKV 60
           MI  + + LN K  A    S+ +  + T  VYRD LTKK                  K V
Sbjct: 1   MIRTIFACLNGK--ASHKKSKLEPLEVTKPVYRDELTKKQRLR--------------KAV 60

Query: 61  KKRVRFADTEPVIIAXXXXXXXXXXXXXXXXKV-VRITVKLTKQEANRMLSRCSNGGVLE 120
           KK VRFA++EP I+                 K  +R+ +KLTK+EA R+LS+C+NGG+LE
Sbjct: 61  KKTVRFAESEPTILGEDSEKTRCVSGNEVGGKEGIRVRIKLTKEEAARLLSKCNNGGILE 120

Query: 121 FGDVASELMRIPPTRV 136
           F DVA EL+ IP  RV
Sbjct: 121 FEDVARELVLIPVNRV 120

BLAST of CsGy4G006310 vs. TrEMBL
Match: tr|A0A0R0IME2|A0A0R0IME2_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_08G023200 PE=4 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 7.1e-10
Identity = 52/140 (37.14%), Postives = 72/140 (51.43%), Query Frame = 0

Query: 1   MISNLISSLNKKLQAVEISSRCKRTKKTAYVYRDNLTKKNHSPPSSXXXPQHQPEEIKKV 60
           MI  + +  N K+      +  +  + T  VYRD LTKK   PP             K V
Sbjct: 55  MIRTIFACFNGKVS--HKKAEVEPLEVTKPVYRDELTKK--QPPR------------KTV 114

Query: 61  KKRVRFADTEPVIIAXXXXXXXXXXXXXXXXKV-----VRITVKLTKQEANRMLSRCSNG 120
           KK VRFA++EP I+                 +V     +R+ +KLTK+EA R+LS+C+NG
Sbjct: 115 KKTVRFAESEPTILGEDSEKEFEKTRWGSGNEVGEKEGMRVRIKLTKEEAARLLSKCNNG 174

Query: 121 GVLEFGDVASELMRIPPTRV 136
           G+L+F DVA EL+ IP  RV
Sbjct: 175 GILQFKDVAHELVLIPVNRV 178

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_011653217.18.9e-57100.00PREDICTED: uncharacterized protein LOC105435188 [Cucumis sativus] >KGN53407.1 hy... [more]
XP_008451951.16.8e-4988.03PREDICTED: uncharacterized protein LOC103493098 [Cucumis melo][more]
XP_022985430.13.0e-3669.06uncharacterized protein LOC111483436 [Cucurbita maxima][more]
XP_023522331.13.0e-3668.35uncharacterized protein LOC111786247 [Cucurbita pepo subsp. pepo][more]
XP_023552096.16.6e-3667.63uncharacterized protein LOC111809864 [Cucurbita pepo subsp. pepo][more]
Match NameE-valueIdentityDescription
AT4G23880.19.6e-0534.69unknown protein[more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
tr|A0A0A0KYE1|A0A0A0KYE1_CUCSA5.9e-57100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G052080 PE=4 SV=1[more]
tr|A0A1S3BS40|A0A1S3BS40_CUCME4.5e-4988.03uncharacterized protein LOC103493098 OS=Cucumis melo OX=3656 GN=LOC103493098 PE=... [more]
tr|A0A0A0KZ22|A0A0A0KZ22_CUCSA3.3e-1561.54Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G091930 PE=4 SV=1[more]
tr|K7KRX3|K7KRX3_SOYBN3.7e-1139.71Uncharacterized protein OS=Glycine max OX=3847 GN=102662341 PE=4 SV=1[more]
tr|A0A0R0IME2|A0A0R0IME2_SOYBN7.1e-1037.14Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_08G023200 PE=4 SV=1[more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy4G006310.1CsGy4G006310.1mRNA


Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 38..53
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 33..61
NoneNo IPR availablePANTHERPTHR36782FAMILY NOT NAMEDcoord: 1..136

The following gene(s) are paralogous to this gene:

None