CsGy3G013310 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy3G013310
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	Uncharacterized protein
Location	Chr3 : 9936779 .. 9937178 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGTGGCTCCAATCCCTCTTCTCCCCATTAAAGAAGCTCTGGTTTCGCCTCCATTCTTCGCCTAAAAAACGTAAGTCACTTCCCTTTTCGAACTCAGTTTCATTTCATCACTTACATTCTCTGTTTCTCTCTTTTTGCCTTCTACAATGCCACCATTTCCCCTTCACTTTCTGTTCTTTCACTAGAAAATTATGTAGAAAAGAAAAGAATCTCTTCAACATCCTTTGAAGTTCAAGTTTTTTTTTTCTTTTTTGGTTCATAGTTTTTGGGTAATTTTGATGCAGGAAGAGGGATATATATTCTGTATGAGGATGTGAAATCCTGTCCCTGTGAAGATGTGCATGTGCTTTGGTCAATATTAGTGGAATCACACACTCCATTGCCACCGAAACAATGA

mRNA sequence

ATGGGGTGGCTCCAATCCCTCTTCTCCCCATTAAAGAAGCTCTGGTTTCGCCTCCATTCTTCGCCTAAAAAACGAAGAGGGATATATATTCTGTATGAGGATGTGAAATCCTGTCCCTGTGAAGATGTGCATGTGCTTTGGTCAATATTAGTGGAATCACACACTCCATTGCCACCGAAACAATGA

Coding sequence (CDS)

ATGGGGTGGCTCCAATCCCTCTTCTCCCCATTAAAGAAGCTCTGGTTTCGCCTCCATTCTTCGCCTAAAAAACGAAGAGGGATATATATTCTGTATGAGGATGTGAAATCCTGTCCCTGTGAAGATGTGCATGTGCTTTGGTCAATATTAGTGGAATCACACACTCCATTGCCACCGAAACAATGA

Protein sequence

MGWLQSLFSPLKKLWFRLHSSPKKRRGIYILYEDVKSCPCEDVHVLWSILVESHTPLPPKQ

Homology

[Close]

BLAST of CsGy3G013310 vs. NCBI nr
Match: KGN56989.1 (hypothetical protein Csa_3G147230 [Cucumis sativus])

HSP 1 Score: 136.0 bits (341), Expect = 4.4e-29
Identity = 61/61 (100.00%), Postives = 61/61 (100.00%), Query Frame = 0


Query: 1  MGWLQSLFSPLKKLWFRLHSSPKKRRGIYILYEDVKSCPCEDVHVLWSILVESHTPLPPK 60
          MGWLQSLFSPLKKLWFRLHSSPKKRRGIYILYEDVKSCPCEDVHVLWSILVESHTPLPPK
Sbjct: 1  MGWLQSLFSPLKKLWFRLHSSPKKRRGIYILYEDVKSCPCEDVHVLWSILVESHTPLPPK 60

Query: 61 Q 62
          Q
Sbjct: 61 Q 61

[Close]

BLAST of CsGy3G013310 vs. NCBI nr
Match: PHT38775.1 (hypothetical protein CQW23_22348 [Capsicum baccatum] >PHT85969.1 hypothetical protein T459_08075 [Capsicum annuum])

HSP 1 Score: 122.1 bits (305), Expect = 6.6e-25
Identity = 56/62 (90.32%), Postives = 59/62 (95.16%), Query Frame = 0


Query: 1  MGWLQSLFSPLKKLWFRLHSSPKKRRGIYILYEDVKSCPCEDVHVLWSILVESHT-PLPP 60
          MGWLQSLFSPLKKLWFRLHS+PKKRRGIYILYEDVKSCPCEDV VLWSILVESH  PLPP
Sbjct: 1  MGWLQSLFSPLKKLWFRLHSAPKKRRGIYILYEDVKSCPCEDVQVLWSILVESHPHPLPP 60

Query: 61 KQ 62
          ++
Sbjct: 61 RK 62

[Close]

BLAST of CsGy3G013310 vs. NCBI nr
Match: POO02187.1 (hypothetical protein TorRG33x02_019710 [Trema orientalis])

HSP 1 Score: 118.2 bits (295), Expect = 9.5e-24
Identity = 56/60 (93.33%), Postives = 57/60 (95.00%), Query Frame = 0


Query: 1  MGWLQSLFSPLKKLWFRLHSSPKKRRGIYILYEDVKSCPCEDVHVLWSILVESHTPLPPK 60
          MGWLQSLFSPLKKLWFRLHS+PKKRRGIYILYEDVKSCP EDVHVLWSILVESHT LP K
Sbjct: 1  MGWLQSLFSPLKKLWFRLHSAPKKRRGIYILYEDVKSCPYEDVHVLWSILVESHT-LPTK 59

[Close]

BLAST of CsGy3G013310 vs. NCBI nr
Match: ONI26253.1 (hypothetical protein PRUPE_1G012900 [Prunus persica])

HSP 1 Score: 117.9 bits (294), Expect = 1.2e-23
Identity = 55/61 (90.16%), Postives = 57/61 (93.44%), Query Frame = 0


Query: 1  MGWLQSLFSPLKKLWFRLHSSPKKRRGIYILYEDVKSCPCEDVHVLWSILVESHTP-LPP 60
          MGWL SLFSPLKKLWFRLHS+PKKRRGIYILYEDVKSCP EDVHVLWSILVE+HTP LP 
Sbjct: 1  MGWLHSLFSPLKKLWFRLHSAPKKRRGIYILYEDVKSCPYEDVHVLWSILVEAHTPSLPS 60

[Close]

BLAST of CsGy3G013310 vs. NCBI nr
Match: PON80087.1 (hypothetical protein PanWU01x14_005370 [Parasponia andersonii])

HSP 1 Score: 117.5 bits (293), Expect = 1.6e-23
Identity = 53/55 (96.36%), Postives = 54/55 (98.18%), Query Frame = 0


Query: 1  MGWLQSLFSPLKKLWFRLHSSPKKRRGIYILYEDVKSCPCEDVHVLWSILVESHT 56
          MGWLQSLFSPLKKLWFRLHS+PKKRRGIYILYEDVKSCP EDVHVLWSILVESHT
Sbjct: 1  MGWLQSLFSPLKKLWFRLHSAPKKRRGIYILYEDVKSCPYEDVHVLWSILVESHT 55

[Close]

BLAST of CsGy3G013310 vs. TrEMBL
Match: tr|A0A0A0L7K5|A0A0A0L7K5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G147230 PE=4 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 2.9e-29
Identity = 61/61 (100.00%), Postives = 61/61 (100.00%), Query Frame = 0


Query: 1  MGWLQSLFSPLKKLWFRLHSSPKKRRGIYILYEDVKSCPCEDVHVLWSILVESHTPLPPK 60
          MGWLQSLFSPLKKLWFRLHSSPKKRRGIYILYEDVKSCPCEDVHVLWSILVESHTPLPPK
Sbjct: 1  MGWLQSLFSPLKKLWFRLHSSPKKRRGIYILYEDVKSCPCEDVHVLWSILVESHTPLPPK 60

Query: 61 Q 62
          Q
Sbjct: 61 Q 61

[Close]

BLAST of CsGy3G013310 vs. TrEMBL
Match: tr|A0A2G2ZVG2|A0A2G2ZVG2_CAPAN (Uncharacterized protein OS=Capsicum annuum OX=4072 GN=T459_08075 PE=4 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 4.4e-25
Identity = 56/62 (90.32%), Postives = 59/62 (95.16%), Query Frame = 0


Query: 1  MGWLQSLFSPLKKLWFRLHSSPKKRRGIYILYEDVKSCPCEDVHVLWSILVESHT-PLPP 60
          MGWLQSLFSPLKKLWFRLHS+PKKRRGIYILYEDVKSCPCEDV VLWSILVESH  PLPP
Sbjct: 1  MGWLQSLFSPLKKLWFRLHSAPKKRRGIYILYEDVKSCPCEDVQVLWSILVESHPHPLPP 60

Query: 61 KQ 62
          ++
Sbjct: 61 RK 62

[Close]

BLAST of CsGy3G013310 vs. TrEMBL
Match: tr|A0A2G2W0L8|A0A2G2W0L8_CAPBA (Uncharacterized protein OS=Capsicum baccatum OX=33114 GN=CQW23_22348 PE=4 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 4.4e-25
Identity = 56/62 (90.32%), Postives = 59/62 (95.16%), Query Frame = 0


Query: 1  MGWLQSLFSPLKKLWFRLHSSPKKRRGIYILYEDVKSCPCEDVHVLWSILVESHT-PLPP 60
          MGWLQSLFSPLKKLWFRLHS+PKKRRGIYILYEDVKSCPCEDV VLWSILVESH  PLPP
Sbjct: 1  MGWLQSLFSPLKKLWFRLHSAPKKRRGIYILYEDVKSCPCEDVQVLWSILVESHPHPLPP 60

Query: 61 KQ 62
          ++
Sbjct: 61 RK 62

[Close]

BLAST of CsGy3G013310 vs. TrEMBL
Match: tr|A0A0V0GKY9|A0A0V0GKY9_SOLCH (Putative ovule protein OS=Solanum chacoense OX=4108 PE=4 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 3.7e-24
Identity = 55/62 (88.71%), Postives = 58/62 (93.55%), Query Frame = 0


Query: 1  MGWLQSLFSPLKKLWFRLHSSPKKRRGIYILYEDVKSCPCEDVHVLWSILVESHT-PLPP 60
          MGWLQSLFSPLKKLWFRLHS+PKKRRGIYILYEDVKSCPCEDV VLWSILVESH   LPP
Sbjct: 1  MGWLQSLFSPLKKLWFRLHSAPKKRRGIYILYEDVKSCPCEDVQVLWSILVESHPHSLPP 60

Query: 61 KQ 62
          ++
Sbjct: 61 RK 62

[Close]

BLAST of CsGy3G013310 vs. TrEMBL
Match: tr|M1CYA3|M1CYA3_SOLTU (Uncharacterized protein OS=Solanum tuberosum OX=4113 PE=4 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 3.7e-24
Identity = 55/62 (88.71%), Postives = 58/62 (93.55%), Query Frame = 0


Query: 1  MGWLQSLFSPLKKLWFRLHSSPKKRRGIYILYEDVKSCPCEDVHVLWSILVESHT-PLPP 60
          MGWLQSLFSPLKKLWFRLHS+PKKRRGIYILYEDVKSCPCEDV VLWSILVESH   LPP
Sbjct: 1  MGWLQSLFSPLKKLWFRLHSAPKKRRGIYILYEDVKSCPCEDVQVLWSILVESHPHSLPP 60

Query: 61 KQ 62
          ++
Sbjct: 61 RK 62

The following BLAST results are available for this feature:

BLAST of CsGy3G013310 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN56989.1	4.4e-29	100.00	hypothetical protein Csa_3G147230 [Cucumis sativus]	[more]
PHT38775.1	6.6e-25	90.32	hypothetical protein CQW23_22348 [Capsicum baccatum] >PHT85969.1 hypothetical pr...	[more]
POO02187.1	9.5e-24	93.33	hypothetical protein TorRG33x02_019710 [Trema orientalis]	[more]
ONI26253.1	1.2e-23	90.16	hypothetical protein PRUPE_1G012900 [Prunus persica]	[more]
PON80087.1	1.6e-23	96.36	hypothetical protein PanWU01x14_005370 [Parasponia andersonii]	[more]

BLAST of CsGy3G013310 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of CsGy3G013310 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CsGy3G013310 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0L7K5\|A0A0A0L7K5_CUCSA	2.9e-29	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G147230 PE=4 SV=1	[more]
tr\|A0A2G2ZVG2\|A0A2G2ZVG2_CAPAN	4.4e-25	90.32	Uncharacterized protein OS=Capsicum annuum OX=4072 GN=T459_08075 PE=4 SV=1	[more]
tr\|A0A2G2W0L8\|A0A2G2W0L8_CAPBA	4.4e-25	90.32	Uncharacterized protein OS=Capsicum baccatum OX=33114 GN=CQW23_22348 PE=4 SV=1	[more]
tr\|A0A0V0GKY9\|A0A0V0GKY9_SOLCH	3.7e-24	88.71	Putative ovule protein OS=Solanum chacoense OX=4108 PE=4 SV=1	[more]
tr\|M1CYA3\|M1CYA3_SOLTU	3.7e-24	88.71	Uncharacterized protein OS=Solanum tuberosum OX=4113 PE=4 SV=1	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016310	phosphorylation
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0016301	kinase activity
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy3G013310.1	CsGy3G013310.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33181:SF7	SUBFAMILY NOT NAMED	coord: 1..60
None	No IPR available	PANTHER	PTHR33181	FAMILY NOT NAMED	coord: 1..60

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy3G013310	Cla021630	Watermelon (97103) v1	cgybwmB217
CsGy3G013310	Csa3G147230	Cucumber (Chinese Long) v2	cgybcuB109
CsGy3G013310	ClCG09G007150	Watermelon (Charleston Gray)	cgybwcgB169
CsGy3G013310	CSPI03G13190	Wild cucumber (PI 183967)	cgybcpiB110
CsGy3G013310	CmaCh14G017020	Cucurbita maxima (Rimu)	cgybcmaB318
CsGy3G013310	CmaCh06G014140	Cucurbita maxima (Rimu)	cgybcmaB427
CsGy3G013310	CmoCh06G014160	Cucurbita moschata (Rifu)	cgybcmoB401
CsGy3G013310	CmoCh14G017450	Cucurbita moschata (Rifu)	cgybcmoB290
CsGy3G013310	Lsi05G015990	Bottle gourd (USVL1VR-Ls)	cgyblsiB196
CsGy3G013310	Cp4.1LG03g10810	Cucurbita pepo (Zucchini)	cgybcpeB406
CsGy3G013310	CsaV3_3G013360	Cucumber (Chinese Long) v3	cgybcucB117
CsGy3G013310	Cla97C09G169760	Watermelon (97103) v2	cgybwmbB248
CsGy3G013310	Cla97C05G086400	Watermelon (97103) v2	cgybwmbB196
CsGy3G013310	Carg23526	Silver-seed gourd	carcgybB0838

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy3G013310	Cucurbita moschata (Rifu)	cgybcmoB322
CsGy3G013310	Cucurbita moschata (Rifu)	cgybcmoB317
CsGy3G013310	Cucurbita moschata (Rifu)	cgybcmoB421
CsGy3G013310	Cucurbita pepo (Zucchini)	cgybcpeB310
CsGy3G013310	Cucurbita pepo (Zucchini)	cgybcpeB354
CsGy3G013310	Cucurbita pepo (Zucchini)	cgybcpeB454
CsGy3G013310	Bottle gourd (USVL1VR-Ls)	cgyblsiB136
CsGy3G013310	Bottle gourd (USVL1VR-Ls)	cgyblsiB157
CsGy3G013310	Melon (DHL92) v3.5.1	cgybmeB200
CsGy3G013310	Melon (DHL92) v3.6.1	cgybmedB201
CsGy3G013310	Watermelon (Charleston Gray)	cgybwcgB203
CsGy3G013310	Watermelon (Charleston Gray)	cgybwcgB230
CsGy3G013310	Watermelon (97103) v1	cgybwmB179
CsGy3G013310	Watermelon (97103) v1	cgybwmB262
CsGy3G013310	Silver-seed gourd	carcgybB0071
CsGy3G013310	Silver-seed gourd	carcgybB0333
CsGy3G013310	Silver-seed gourd	carcgybB0605
CsGy3G013310	Watermelon (97103) v2	cgybwmbB222
CsGy3G013310	Wax gourd	cgybwgoB239
CsGy3G013310	Wax gourd	cgybwgoB257
CsGy3G013310	Cucurbita maxima (Rimu)	cgybcmaB345
CsGy3G013310	Cucurbita maxima (Rimu)	cgybcmaB349
CsGy3G013310	Cucurbita maxima (Rimu)	cgybcmaB454