CSPI03G13190 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI03G13190
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionBnaA05g17230D protein
LocationChr3 : 9966478 .. 9966874 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGTGGCTCCAATCCCTCTTCTCCCCATTAAAGAAGCTCTGGTTTCGCCTCCATTCTTCGCCTAAAAAACGTAAGTCACTTCCCTTTTCGAACTCAGTTTCATTTCATCACTTACATTCTCTGTTTCTCTCTTTTTGCCTTCTACAATGCCACCATTTCCCCTTCACTTTCTGTTCTTTCACTAGAAAATTATGTAGAAAAGAAAAGAATCTCTTCAACATCCTTTGAAGTTCAAGTTTTTTTTTTCTTTTTTGGTTCATAGTTTTTGGGTAATTTTGATGCAGGAAGAGGGATATATATTCTGTATGAGGATGTGAAATCCTGTCCCTGTGAAGATGTGCATGTGCTTTGGTCAATATTAGTGGAATCACACACTCCATTGCCACCGAAACAA

mRNA sequence

ATGGGGTGGCTCCAATCCCTCTTCTCCCCATTAAAGAAGCTCTGGTTTCGCCTCCATTCTTCGCCTAAAAAACGTAAAGGGATATATATTCTGTATGAGGATGTGAAATCCTGTCCCTGTGAAGATGTGCATGTGCTTTGGTCAATATTAGTGGAATCACACACTCCATTGCCACCGAAACAA

Coding sequence (CDS)

ATGGGGTGGCTCCAATCCCTCTTCTCCCCATTAAAGAAGCTCTGGTTTCGCCTCCATTCTTCGCCTAAAAAACGTAAAGGGATATATATTCTGTATGAGGATGTGAAATCCTGTCCCTGTGAAGATGTGCATGTGCTTTGGTCAATATTAGTGGAATCACACACTCCATTGCCACCGAAACAA
Homology
[Close]
BLAST of CSPI03G13190 vs. TrEMBL
Match: A0A0A0L7K5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G147230 PE=4 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 4.6e-29
Identity = 60/61 (98.36%), Postives = 61/61 (100.00%), Query Frame = 1 

Query: 1  MGWLQSLFSPLKKLWFRLHSSPKKRKGIYILYEDVKSCPCEDVHVLWSILVESHTPLPPK 60
          MGWLQSLFSPLKKLWFRLHSSPKKR+GIYILYEDVKSCPCEDVHVLWSILVESHTPLPPK
Sbjct: 1  MGWLQSLFSPLKKLWFRLHSSPKKRRGIYILYEDVKSCPCEDVHVLWSILVESHTPLPPK 60

Query: 61 Q 62
          Q
Sbjct: 61 Q 61

[Close]
BLAST of CSPI03G13190 vs. TrEMBL
Match: M1CYA3_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400030088 PE=4 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 5.8e-24
Identity = 54/62 (87.10%), Postives = 58/62 (93.55%), Query Frame = 1 

Query: 1  MGWLQSLFSPLKKLWFRLHSSPKKRKGIYILYEDVKSCPCEDVHVLWSILVESHT-PLPP 60
          MGWLQSLFSPLKKLWFRLHS+PKKR+GIYILYEDVKSCPCEDV VLWSILVESH   LPP
Sbjct: 1  MGWLQSLFSPLKKLWFRLHSAPKKRRGIYILYEDVKSCPCEDVQVLWSILVESHPHSLPP 60

Query: 61 KQ 62
          ++
Sbjct: 61 RK 62

[Close]
BLAST of CSPI03G13190 vs. TrEMBL
Match: A0A0V0GKY9_SOLCH (Putative ovule protein OS=Solanum chacoense PE=4 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 5.8e-24
Identity = 54/62 (87.10%), Postives = 58/62 (93.55%), Query Frame = 1 

Query: 1  MGWLQSLFSPLKKLWFRLHSSPKKRKGIYILYEDVKSCPCEDVHVLWSILVESHT-PLPP 60
          MGWLQSLFSPLKKLWFRLHS+PKKR+GIYILYEDVKSCPCEDV VLWSILVESH   LPP
Sbjct: 1  MGWLQSLFSPLKKLWFRLHSAPKKRRGIYILYEDVKSCPCEDVQVLWSILVESHPHSLPP 60

Query: 61 KQ 62
          ++
Sbjct: 61 RK 62

[Close]
BLAST of CSPI03G13190 vs. TrEMBL
Match: K4CVH5_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 5.8e-24
Identity = 54/62 (87.10%), Postives = 58/62 (93.55%), Query Frame = 1 

Query: 1  MGWLQSLFSPLKKLWFRLHSSPKKRKGIYILYEDVKSCPCEDVHVLWSILVESHT-PLPP 60
          MGWLQSLFSPLKKLWFRLHS+PKKR+GIYILYEDVKSCPCEDV VLWSILVESH   LPP
Sbjct: 1  MGWLQSLFSPLKKLWFRLHSAPKKRRGIYILYEDVKSCPCEDVQVLWSILVESHPHSLPP 60

Query: 61 KQ 62
          ++
Sbjct: 61 RK 62

[Close]
BLAST of CSPI03G13190 vs. TrEMBL
Match: M5XVP0_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa024671mg PE=4 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 1.3e-23
Identity = 52/61 (85.25%), Postives = 56/61 (91.80%), Query Frame = 1 

Query: 1  MGWLQSLFSPLKKLWFRLHSSPKKRKGIYILYEDVKSCPCEDVHVLWSILVESHTPLPPK 60
          MGWL SLFSPLKKLWFRLHS+PKKR+GIYILYEDVKSCP EDVHVLWSILVE+HTP  P 
Sbjct: 1  MGWLHSLFSPLKKLWFRLHSAPKKRRGIYILYEDVKSCPYEDVHVLWSILVEAHTPSLPS 60

Query: 61 Q 62
          +
Sbjct: 61 K 61

[Close]
BLAST of CSPI03G13190 vs. NCBI nr
Match: gi|700201856|gb|KGN56989.1| (hypothetical protein Csa_3G147230 [Cucumis sativus])

HSP 1 Score: 134.4 bits (337), Expect = 6.6e-29
Identity = 60/61 (98.36%), Postives = 61/61 (100.00%), Query Frame = 1 

Query: 1  MGWLQSLFSPLKKLWFRLHSSPKKRKGIYILYEDVKSCPCEDVHVLWSILVESHTPLPPK 60
          MGWLQSLFSPLKKLWFRLHSSPKKR+GIYILYEDVKSCPCEDVHVLWSILVESHTPLPPK
Sbjct: 1  MGWLQSLFSPLKKLWFRLHSSPKKRRGIYILYEDVKSCPCEDVHVLWSILVESHTPLPPK 60

Query: 61 Q 62
          Q
Sbjct: 61 Q 61

[Close]
BLAST of CSPI03G13190 vs. NCBI nr
Match: gi|596245989|ref|XP_007224549.1| (hypothetical protein PRUPE_ppa024671mg [Prunus persica])

HSP 1 Score: 116.3 bits (290), Expect = 1.9e-23
Identity = 52/61 (85.25%), Postives = 56/61 (91.80%), Query Frame = 1 

Query: 1  MGWLQSLFSPLKKLWFRLHSSPKKRKGIYILYEDVKSCPCEDVHVLWSILVESHTPLPPK 60
          MGWL SLFSPLKKLWFRLHS+PKKR+GIYILYEDVKSCP EDVHVLWSILVE+HTP  P 
Sbjct: 1  MGWLHSLFSPLKKLWFRLHSAPKKRRGIYILYEDVKSCPYEDVHVLWSILVEAHTPSLPS 60

Query: 61 Q 62
          +
Sbjct: 61 K 61

[Close]
BLAST of CSPI03G13190 vs. NCBI nr
Match: gi|297737042|emb|CBI26243.3| (unnamed protein product [Vitis vinifera])

HSP 1 Score: 115.2 bits (287), Expect = 4.1e-23
Identity = 51/61 (83.61%), Postives = 56/61 (91.80%), Query Frame = 1 

Query: 1  MGWLQSLFSPLKKLWFRLHSSPKKRKGIYILYEDVKSCPCEDVHVLWSILVESHTPLPPK 60
          MGWLQSLFSPLKKLWFRLHS+ +K +GIYILYEDVKSCP EDVHVLWSILVESH+P PP 
Sbjct: 1  MGWLQSLFSPLKKLWFRLHSAQRKSRGIYILYEDVKSCPYEDVHVLWSILVESHSPSPPS 60

Query: 61 Q 62
          +
Sbjct: 61 K 61

[Close]
BLAST of CSPI03G13190 vs. NCBI nr
Match: gi|743785936|ref|XP_011026407.1| (PREDICTED: uncharacterized protein LOC105127022 [Populus euphratica])

HSP 1 Score: 114.0 bits (284), Expect = 9.2e-23
Identity = 52/61 (85.25%), Postives = 55/61 (90.16%), Query Frame = 1 

Query: 1   MGWLQSLFSPLKKLWFRLHSSPKKRKGIYILYEDVKSCPCEDVHVLWSILVESHTPLPPK 60
           MGWLQSL SPLKKLWFRLHS+PKKR+GIYILYEDVKSC  EDVHVLWSILVESHTP  P 
Sbjct: 63  MGWLQSLLSPLKKLWFRLHSTPKKRRGIYILYEDVKSCQYEDVHVLWSILVESHTPSLPS 122

Query: 61  Q 62
           +
Sbjct: 123 K 123

[Close]
BLAST of CSPI03G13190 vs. NCBI nr
Match: gi|728849117|gb|KHG28560.1| (Putative serine/threonine-protein kinase yrzF [Gossypium arboreum])

HSP 1 Score: 113.6 bits (283), Expect = 1.2e-22
Identity = 50/56 (89.29%), Postives = 54/56 (96.43%), Query Frame = 1 

Query: 1  MGWLQSLFSPLKKLWFRLHSSPKKRKGIYILYEDVKSCPCEDVHVLWSILVESHTP 57
          MGWLQSLFSPLKKLWFRLHS+ +KR+GIYILYEDVKSCPCEDVHVLWSILVES+ P
Sbjct: 1  MGWLQSLFSPLKKLWFRLHSAQRKRRGIYILYEDVKSCPCEDVHVLWSILVESNAP 56

The following BLAST results are available for this feature:
BLAST of CSPI03G13190 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI03G13190 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L7K5_CUCSA4.6e-2998.36Uncharacterized protein OS=Cucumis sativus GN=Csa_3G147230 PE=4 SV=1[more]
M1CYA3_SOLTU5.8e-2487.10Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400030088 PE=4 SV=1[more]
A0A0V0GKY9_SOLCH5.8e-2487.10Putative ovule protein OS=Solanum chacoense PE=4 SV=1[more]
K4CVH5_SOLLC5.8e-2487.10Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1[more]
M5XVP0_PRUPE1.3e-2385.25Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa024671mg PE=4 SV=1[more]
BLAST of CSPI03G13190 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CSPI03G13190 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700201856|gb|KGN56989.1|6.6e-2998.36hypothetical protein Csa_3G147230 [Cucumis sativus][more]
gi|596245989|ref|XP_007224549.1|1.9e-2385.25hypothetical protein PRUPE_ppa024671mg [Prunus persica][more]
gi|297737042|emb|CBI26243.3|4.1e-2383.61unnamed protein product [Vitis vinifera][more]
gi|743785936|ref|XP_011026407.1|9.2e-2385.25PREDICTED: uncharacterized protein LOC105127022 [Populus euphratica][more]
gi|728849117|gb|KHG28560.1|1.2e-2289.29Putative serine/threonine-protein kinase yrzF [Gossypium arboreum][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0016310 phosphorylation
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0005739 mitochondrion
molecular_function GO:0016301 kinase activity
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI03G13190.1CSPI03G13190.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33181FAMILY NOT NAMEDcoord: 1..54
score: 7.1
NoneNo IPR availablePANTHERPTHR33181:SF3SUBFAMILY NOT NAMEDcoord: 1..54
score: 7.1

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI03G13190Cla021630Watermelon (97103) v1cpiwmB231
CSPI03G13190Csa3G147230Cucumber (Chinese Long) v2cpicuB120
CSPI03G13190ClCG09G007150Watermelon (Charleston Gray)cpiwcgB185
CSPI03G13190Lsi05G015990Bottle gourd (USVL1VR-Ls)cpilsiB207
CSPI03G13190CsaV3_3G013360Cucumber (Chinese Long) v3cpicucB144
CSPI03G13190Cla97C05G086400Watermelon (97103) v2cpiwmbB209
CSPI03G13190Cla97C09G169760Watermelon (97103) v2cpiwmbB266
CSPI03G13190CmaCh14G017020Cucurbita maxima (Rimu)cmacpiB255
CSPI03G13190CmaCh06G014140Cucurbita maxima (Rimu)cmacpiB826
CSPI03G13190CmoCh06G014160Cucurbita moschata (Rifu)cmocpiB814
CSPI03G13190CmoCh14G017450Cucurbita moschata (Rifu)cmocpiB243
CSPI03G13190Cp4.1LG03g10810Cucurbita pepo (Zucchini)cpecpiB611
CSPI03G13190CsGy3G013310Cucumber (Gy14) v2cgybcpiB110
CSPI03G13190Carg23526Silver-seed gourdcarcpiB0884
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI03G13190Wax gourdcpiwgoB252
CSPI03G13190Wax gourdcpiwgoB269
CSPI03G13190Cucumber (Gy14) v1cgycpiB383
CSPI03G13190Cucurbita maxima (Rimu)cmacpiB359
CSPI03G13190Cucurbita maxima (Rimu)cmacpiB903
CSPI03G13190Cucurbita moschata (Rifu)cmocpiB352
CSPI03G13190Cucurbita moschata (Rifu)cmocpiB883
CSPI03G13190Melon (DHL92) v3.5.1cpimeB230
CSPI03G13190Watermelon (Charleston Gray)cpiwcgB226
CSPI03G13190Watermelon (Charleston Gray)cpiwcgB255
CSPI03G13190Watermelon (97103) v1cpiwmB189
CSPI03G13190Watermelon (97103) v1cpiwmB281
CSPI03G13190Cucurbita pepo (Zucchini)cpecpiB312
CSPI03G13190Cucurbita pepo (Zucchini)cpecpiB861
CSPI03G13190Bottle gourd (USVL1VR-Ls)cpilsiB149
CSPI03G13190Melon (DHL92) v3.6.1cpimedB176
CSPI03G13190Melon (DHL92) v3.6.1cpimedB224
CSPI03G13190Silver-seed gourdcarcpiB0074
CSPI03G13190Silver-seed gourdcarcpiB0355
CSPI03G13190Silver-seed gourdcarcpiB0639
CSPI03G13190Watermelon (97103) v2cpiwmbB239