Cp4.1LG14g06860 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below.GTTATTTGGGGGGAAAATCCGGCGGTTTTCAACCAGAATTGAAGCTATGCCTCCGACACCTTCCGTCGCTTCTGATGGAGAGCCCAATTGGGAATTCAGCTGGTTGTTCTCTCTTTCTCCAAGCCCATAAATGTATAATTACATGCTTTCCTTCGATTGTATGCCATATGCTTTTATATCAGTTTGTTCGTTGATGTTGCTGTGTTAGCTTTTGGGTGAGCTTCGCCTTTTTAGCTTTATCTTATTTCTCTTGTGATTGATCTGTTGTGTTCTTTCTCTGGTTCACTGGTTTTTCCACGGGGGAAAAACAAAAGACAATGATGATGATGATGTTCTTGCAACTGCCAAGCCATTCTTACCCGGAAAGCTCAATCTTTTATTGCTGAATCCGGAGTTTTTAACTACAGTAGTGCCTCGAACGTTCAGAAATGCCATTAATTCCCAATTGTTGGAATGATGGACCTTATTAACTAGCCAAAGCTCTGATCTTTCGCTGTGGTTCCTGGAAGCCAATGATGTTTTTTGGGTCTTGCCAGCGATCAACCATTGCTATTTTATCTTTCATCTTTTCTCGATTGCCTTCTAGAGACACAACAAGTAATTTGCTTCTTTTTCCAAGTATTCAATCTGGTTTGCTTTCTGCAGTGACTTTGAAGTCGATTATGAGTCGGAGAAGAAAGCTTCAATTGTGTACAAGGCTTTAGTAGTCGATAAAGAGGTGCTTCTCCATGATATCAATCTTCACATTGTGCCTCCGTATACTTAACTTGTTTCTGATTCCATTTCTGTGCTAAGTACAGTTGCAGCCAGACAAAGTGAAAAGGGAGATGACAGTTTCTGATGGAAAACTTTCTATGTGAGCCTCTCTTTCTCTTCGAATTCCTGGTTCTTAATGTACGTCTAACAGTAGATAGATACCATAATAGCTTAATACAGGATTCTTTTGAGCATTAGTAAGGCTGCTGCGTTCATATTTCTCCGCAATCATATTTTGGCACTCCCATTAGCTGCTCATTTTTTTTCTCGTAGACACTTTGAGGCAGTGGAAGCAAGATTTCTGCGTGCATCATTCAGTGCTTTTGTAGACGTGCTTACTCTTGCCACAAAAACAATCGAAGATTTCGGACAAGGAGTGGATTTCTGATAGCCTTACATGCCCCTGGCCCTCTTATATCAAGTGTCACTTTATGCTTAAAGTAGCTATCATTTTAATTTACTACCTATCTGTAATTTTTTCACAATATGATTTGTAGTGGTTTGATCGAGTGTGAAGGTACTCATTCCAACATTGAGATCTAACGAGATGACATTTTCACCCACATGATGATATCATTCATGTTAATAACCATTAGAAAGGATGATCAATCCTACTTAATACATGGATAAACTTGGAAACGACAAAAATTATATCAATTTTATTAAACTAAATTATAAACAATAATTTGATGTGATTGTGGTTCATCATATCATTTGAAGTGGAAAAGAACAAAGAAATGACTTCATCGTGGGATGAAGGAAAACTGGTATATGGAATTCAATAACGTTCATGAAAGCACAAAGTGGCATCCCTAATGAATTGAATTTGAAGACCCCACTCACCAGCTGATTCCTCTTGTGCTAGTATTCATCCAAGTAAGTGTACAATGTATCGTCTTTCTTTGACTTGCGTCGGCTAAGCAAGGCCTTCAGGAGGCGTTTGCTTTTGCTGGGATATTGTTCAACATCTTTGCTGTTATCCCTCCTTTCTGCTGGCATCCGCATCGATGCTGATTTCCTAGGTGCCGAAGGGTACTGGTACCAAAGAAAAATTCATGTTGCAAAATCTCAGTTACTAGTAAAACACCATATACTTTTGCACAACATAAATGCAATT GTTATTTGGGGGGAAAATCCGGCGGTTTTCAACCAGAATTGAAGCTATGCCTCCGACACCTTCCGTCGCTTCTGATGGAGAGCCCAATTGGGAATTCAGCTGTGACTTTGAAGTCGATTATGAGTCGGAGAAGAAAGCTTCAATTGTGTACAAGGCTTTAGTAGTCGATAAAGAGTTGCAGCCAGACAAAGTGAAAAGGGAGATGACAGTTTCTGATGGAAAACTTTCTATACACTTTGAGGCAGTGGAAGCAAGATTTCTGCGTGCATCATTCAGTGCTTTTGTAGACGTGCTTACTCTTGCCACAAAAACAATCGAAGATTTCGGACAAGGAGCCTTCAGGAGGCGTTTGCTTTTGCTGGGATATTGTTCAACATCTTTGCTGTTATCCCTCCTTTCTGCTGGCATCCGCATCGATGCTGATTTCCTAGGTGCCGAAGGGTACTGGTACCAAAGAAAAATTCATGTTGCAAAATCTCAGTTACTAGTAAAACACCATATACTTTTGCACAACATAAATGCAATT ATGCCTCCGACACCTTCCGTCGCTTCTGATGGAGAGCCCAATTGGGAATTCAGCTGTGACTTTGAAGTCGATTATGAGTCGGAGAAGAAAGCTTCAATTGTGTACAAGGCTTTAGTAGTCGATAAAGAGTTGCAGCCAGACAAAGTGAAAAGGGAGATGACAGTTTCTGATGGAAAACTTTCTATACACTTTGAGGCAGTGGAAGCAAGATTTCTGCGTGCATCATTCAGTGCTTTTGTAGACGTGCTTACTCTTGCCACAAAAACAATCGAAGATTTCGGACAAGGAGCCTTCAGGAGGCGTTTGCTTTTGCTGGGATATTGTTCAACATCTTTGCTGTTATCCCTCCTTTCTGCTGGCATCCGCATCGATGCTGATTTCCTAGGTGCCGAAGGGTACTGGTACCAAAGAAAAATTCATGTTGCAAAATCTCAGTTACTAGTAAAACACCATATACTTTTGCACAACATAAATGCAATT MPPTPSVASDGEPNWEFSCDFEVDYESEKKASIVYKALVVDKELQPDKVKREMTVSDGKLSIHFEAVEARFLRASFSAFVDVLTLATKTIEDFGQGAFRRRLLLLGYCSTSLLLSLLSAGIRIDADFLGAEGYWYQRKIHVAKSQLLVKHHILLHNINAI
BLAST of Cp4.1LG14g06860 vs. TrEMBL
Match: A0A0A0L7A2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G238730 PE=4 SV=1) HSP 1 Score: 171.8 bits (434), Expect = 6.8e-40 Identity = 88/95 (92.63%), Postives = 89/95 (93.68%), Query Frame = 1
BLAST of Cp4.1LG14g06860 vs. TrEMBL
Match: M5X2X8_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013862mg PE=4 SV=1) HSP 1 Score: 149.8 bits (377), Expect = 2.8e-33 Identity = 74/96 (77.08%), Postives = 84/96 (87.50%), Query Frame = 1
BLAST of Cp4.1LG14g06860 vs. TrEMBL
Match: A0A124SFY0_CYNCS (EKC/KEOPS complex, subunit Pcc1 OS=Cynara cardunculus var. scolymus GN=Ccrd_017027 PE=4 SV=1) HSP 1 Score: 142.5 bits (358), Expect = 4.4e-31 Identity = 69/82 (84.15%), Postives = 76/82 (92.68%), Query Frame = 1
BLAST of Cp4.1LG14g06860 vs. TrEMBL
Match: A0A061G2H6_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_015432 PE=4 SV=1) HSP 1 Score: 142.1 bits (357), Expect = 5.8e-31 Identity = 72/91 (79.12%), Postives = 78/91 (85.71%), Query Frame = 1
BLAST of Cp4.1LG14g06860 vs. TrEMBL
Match: A0A0B0PDL0_GOSAR (L antigen family member 3 OS=Gossypium arboreum GN=F383_00710 PE=4 SV=1) HSP 1 Score: 141.7 bits (356), Expect = 7.5e-31 Identity = 70/88 (79.55%), Postives = 78/88 (88.64%), Query Frame = 1
BLAST of Cp4.1LG14g06860 vs. TAIR10
Match: AT5G53045.1 (AT5G53045.1 unknown protein) HSP 1 Score: 122.1 bits (305), Expect = 3.1e-28 Identity = 59/95 (62.11%), Postives = 75/95 (78.95%), Query Frame = 1
BLAST of Cp4.1LG14g06860 vs. NCBI nr
Match: gi|449456983|ref|XP_004146228.1| (PREDICTED: uncharacterized protein LOC101217139 [Cucumis sativus]) HSP 1 Score: 171.8 bits (434), Expect = 9.8e-40 Identity = 88/95 (92.63%), Postives = 89/95 (93.68%), Query Frame = 1
BLAST of Cp4.1LG14g06860 vs. NCBI nr
Match: gi|700202525|gb|KGN57658.1| (hypothetical protein Csa_3G238730 [Cucumis sativus]) HSP 1 Score: 171.8 bits (434), Expect = 9.8e-40 Identity = 88/95 (92.63%), Postives = 89/95 (93.68%), Query Frame = 1
BLAST of Cp4.1LG14g06860 vs. NCBI nr
Match: gi|659133652|ref|XP_008466840.1| (PREDICTED: uncharacterized protein LOC103504146 [Cucumis melo]) HSP 1 Score: 166.4 bits (420), Expect = 4.1e-38 Identity = 83/94 (88.30%), Postives = 88/94 (93.62%), Query Frame = 1
BLAST of Cp4.1LG14g06860 vs. NCBI nr
Match: gi|596012112|ref|XP_007218647.1| (hypothetical protein PRUPE_ppa013862mg [Prunus persica]) HSP 1 Score: 149.8 bits (377), Expect = 4.0e-33 Identity = 74/96 (77.08%), Postives = 84/96 (87.50%), Query Frame = 1
BLAST of Cp4.1LG14g06860 vs. NCBI nr
Match: gi|645258086|ref|XP_008234719.1| (PREDICTED: uncharacterized protein LOC103333623 [Prunus mume]) HSP 1 Score: 148.7 bits (374), Expect = 8.9e-33 Identity = 73/96 (76.04%), Postives = 83/96 (86.46%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: |