CmoCh16G000470 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTACAAACCCTAGAAGGCGAAGAAGGCGAAGCAGAAGGCGAAGAGAGGTTATGATGATGCAAGTAGAAATCCATCCGCTTCACCGGCTCCACAGTTTACTGGAAGATGTGCAGTCCACTGCTCCTACACGACGCCGTTTCTCAAGGGTCCTCTGACTCCCTCTTTGCCATTTCTGTCCTCTAATTATCTAAATCTCAGTGGATAAAGCATGTTAACCATTCCTGTAAATCCAAACTCCCTGTGGTTAGTACCCATAACTCCTTTCTATTATTTTTATTTTTACTTTTACCTTTATTATTTTATTGTTACTAAATCCCAGTATTCTTTTCTTATTGTCGCTAAATCCTAATATTCTTTTGACCAAATAAATTTTAAATTTTAAATTTTAAATTTTAATTTCAAAACAAAAATCATTCGCATACACTATTTCAAAAAGGAAAAGAAAATAATGTTATTAACTCACTTTAAAACTCTTTTCAAATGTGTCATCAATTGAAACACTTTTTATTGAAAAAAAACATTCAAGAAAGGAATATATTTCTTTTCATATGTGGTTTCTAGTAAGTTCTTTTTAGTTTTCATGCATTTATTAGGCTTATAATAGCTGAAGTTATTACCTATTTTACCACATAATTTTTAAAACAATACATAATTTTTTGGTCTCATCAAACTCTAACAAATGGGTTGGAATTATTAACCGCCAACACTGTTACAATGTTGCTGTTTTAGCTTTTGGGTGAGCTTCGCCTTTTTAGCTTTATCGTATTTCTCTTGTGATTAATCGGTTATGTTCTTTCTCTGGTTCACTGGTTTTTCCACGGGGGGGAAAAAAAAGACAATGATGATGATGATGTTCTTGCAACTGGCAAGCCATTTTTACCCCGAAAGCTCAAATTTTTGTTTTGTGACTAGAGTAGTGTCTCGAAAGCTCAGAAATGCCATTAATTCTCAATTGTTGGAATGGAAGGACCTTTTTAACTAGCCAAAGCTCTGATCTTTCGCTGTGGTTCCTGGAAGCAACTGATGTTTTTTGGGTCTTGCCAGCGATCAACCATTGCTATTTTATCTTTCATCTTTTCTTGATTGCCTTCCTAGAGAGACAGAACAAGTAATTTGCCTCTTTTTCCAAGTATTGAATCTGGTTTGCTCTATGCAGTGACTTTGAAGTCGATTATGAGTCAGAGAAGAAAGCTTCAATTGTGTACAAGGCTTTAGTAGTCGATAAAGAGGTGCTTCTCCATGATATCAATCTTCACATTGTGCCTCCGTAATTAACTTGTTTCTGATTCCATTTCTGTGCTAAGTACAGTTGCAGCCAGACAAGGTGAAAAGGGAGATGACAGTTTCTGATGGAAAACTTTCTATGTGAGCCTCTTTTTCTCTTCGAATCCCTGGTTCTTAATGTACCAAAATAGCTTAATACAGGATTCTTTTGAGCATTAGTAAGGCTGCTGCGTTCATATTTCTCTGCAATCATGTTTTGGCTCTTTTTTTTTTTTTTCTCGTAGACACCTTGAGGCAGTGGAAGCAAGATTTCTGCGTGCATCATTCAGTGCTTTTGTAGACGTGCTTACTCTTGCCACAAAAACAATCGAAGATTTCGGACGAGGAGTGGATTTCTGATAGCCTTACATGCCCCTGGCCCTCATATATCAACTGTCACTTTATGCTTAAAATAGCTATCATTTTAATTTACTACCTATCTGTAATTTTACCACAATATGATTTGTAGTGGTTTGATCGAGTGTGAAGGTACTCATTCCAACATTGAGATCTA TTACAAACCCTAGAAGGCGAAGAAGGCGAAGCAGAAGGCGAAGAGAGGTTATGATGATGCAAGTAGAAATCCATCCGCTTCACCGGCTCCACAGTTTACTGGAAGATGTGCAGTCCACTGCTCCTACACGACGCCGTTTCTCAAGGGTCCTCTGACTCCCTCTTTGCCATTTCTGTCCTCTAATTATCTAAATCTCAGTGGATAAAGCATGTTAACCATTCCTGTAAATCCAAACTCCCTGTGTGACTTTGAAGTCGATTATGAGTCAGAGAAGAAAGCTTCAATTGTGTACAAGGCTTTAGTAGTCGATAAAGAGTTGCAGCCAGACAAGGTGAAAAGGGAGATGACAGTTTCTGATGGAAAACTTTCTATACACCTTGAGGCAGTGGAAGCAAGATTTCTGCGTGCATCATTCAGTGCTTTTGTAGACGTGCTTACTCTTGCCACAAAAACAATCGAAGATTTCGGACGAGGAGTGGATTTCTGATAGCCTTACATGCCCCTGGCCCTCATATATCAACTGTCACTTTATGCTTAAAATAGCTATCATTTTAATTTACTACCTATCTGTAATTTTACCACAATATGATTTGTAGTGGTTTGATCGAGTGTGAAGGTACTCATTCCAACATTGAGATCTA ATGTTAACCATTCCTGTAAATCCAAACTCCCTGTGTGACTTTGAAGTCGATTATGAGTCAGAGAAGAAAGCTTCAATTGTGTACAAGGCTTTAGTAGTCGATAAAGAGTTGCAGCCAGACAAGGTGAAAAGGGAGATGACAGTTTCTGATGGAAAACTTTCTATACACCTTGAGGCAGTGGAAGCAAGATTTCTGCGTGCATCATTCAGTGCTTTTGTAGACGTGCTTACTCTTGCCACAAAAACAATCGAAGATTTCGGACGAGGAGTGGATTTCTGA
BLAST of CmoCh16G000470 vs. TrEMBL
Match: A0A0A0L7A2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G238730 PE=4 SV=1) HSP 1 Score: 143.3 bits (360), Expect = 1.5e-31 Identity = 74/81 (91.36%), Postives = 76/81 (93.83%), Query Frame = 1
BLAST of CmoCh16G000470 vs. TrEMBL
Match: M5X2X8_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013862mg PE=4 SV=1) HSP 1 Score: 133.7 bits (335), Expect = 1.2e-28 Identity = 65/80 (81.25%), Postives = 75/80 (93.75%), Query Frame = 1
BLAST of CmoCh16G000470 vs. TrEMBL
Match: A0A124SFY0_CYNCS (EKC/KEOPS complex, subunit Pcc1 OS=Cynara cardunculus var. scolymus GN=Ccrd_017027 PE=4 SV=1) HSP 1 Score: 133.7 bits (335), Expect = 1.2e-28 Identity = 67/89 (75.28%), Postives = 75/89 (84.27%), Query Frame = 1
BLAST of CmoCh16G000470 vs. TrEMBL
Match: B9IDP4_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0015s01390g PE=4 SV=2) HSP 1 Score: 130.6 bits (327), Expect = 1.0e-27 Identity = 64/79 (81.01%), Postives = 73/79 (92.41%), Query Frame = 1
BLAST of CmoCh16G000470 vs. TrEMBL
Match: E0CV60_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_16s0098g01710 PE=4 SV=1) HSP 1 Score: 130.2 bits (326), Expect = 1.3e-27 Identity = 65/89 (73.03%), Postives = 75/89 (84.27%), Query Frame = 1
BLAST of CmoCh16G000470 vs. TAIR10
Match: AT5G53045.1 (AT5G53045.1 unknown protein) HSP 1 Score: 108.2 bits (269), Expect = 2.7e-24 Identity = 52/77 (67.53%), Postives = 66/77 (85.71%), Query Frame = 1
BLAST of CmoCh16G000470 vs. NCBI nr
Match: gi|449456983|ref|XP_004146228.1| (PREDICTED: uncharacterized protein LOC101217139 [Cucumis sativus]) HSP 1 Score: 143.3 bits (360), Expect = 2.1e-31 Identity = 74/81 (91.36%), Postives = 76/81 (93.83%), Query Frame = 1
BLAST of CmoCh16G000470 vs. NCBI nr
Match: gi|700202525|gb|KGN57658.1| (hypothetical protein Csa_3G238730 [Cucumis sativus]) HSP 1 Score: 143.3 bits (360), Expect = 2.1e-31 Identity = 74/81 (91.36%), Postives = 76/81 (93.83%), Query Frame = 1
BLAST of CmoCh16G000470 vs. NCBI nr
Match: gi|659133652|ref|XP_008466840.1| (PREDICTED: uncharacterized protein LOC103504146 [Cucumis melo]) HSP 1 Score: 139.8 bits (351), Expect = 2.4e-30 Identity = 70/81 (86.42%), Postives = 76/81 (93.83%), Query Frame = 1
BLAST of CmoCh16G000470 vs. NCBI nr
Match: gi|976919866|gb|KVI04653.1| (EKC/KEOPS complex, subunit Pcc1 [Cynara cardunculus var. scolymus]) HSP 1 Score: 133.7 bits (335), Expect = 1.7e-28 Identity = 67/89 (75.28%), Postives = 75/89 (84.27%), Query Frame = 1
BLAST of CmoCh16G000470 vs. NCBI nr
Match: gi|596012112|ref|XP_007218647.1| (hypothetical protein PRUPE_ppa013862mg [Prunus persica]) HSP 1 Score: 133.7 bits (335), Expect = 1.7e-28 Identity = 65/80 (81.25%), Postives = 75/80 (93.75%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: |