Carg15058 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGCATTTATTAGTTATTACCTATTTTACCACATAATTTTTAAAACTCTTAACAAATGGGTTGGAATTATTAACCGCTAAGACTGTTCCCACGACGCCGACCGTGCCCAGTCCGCGAAGTTGATGCGTGGGCCGCACAATGTGAATATCACCGCTTAACCAGGTATCCGTGAAATTATTTTTTTAAAATAATAAAAGAAACGCCCCATTTTAGTTATGGAGCTCTGAAAAATTTACATTCATTTTTTCAATTATTTACGAAGAAACCAACAAAATGGCCGTATCTCTTATGCTAGGTTATTTGGGGGGAAAATCCGGCGCTTTTCAACCAGAATTGAAGCTATGGCTCCGACACCTTCCCTCGCTTCTCATGGAGACCCCAAGTGGGAATTCAGCTGGTTGTTCTCTCTTTCTCTAACCCCATAAATGTATATTTACATGCTTTCCTTCGATTGTATGCCATATGCTTTTATATCAGTTTGTTCGTTGATGTTGCTGTGTTAGCTTTTGGGTGAGCTTCGCCTTTTTAGCTTTATCATATTTCTCTTGTGATTAATCGGTTATGTTCTTTCTCTGGTTCACTGGTTTTTCCACGGGGGGGAAAAAAAAGACAATGATGATGATGATGTTCTTGCAACTGGCAAGCCATTTTTACCCCGAAAGCTCAAATTTTTGTTTTGTGACTAGAGTAGTGGTCTCGAAAGCTCAGAAATGCCATTAATTCTCAATTGTTGGAATGATGGACCTTTTTAACTAGCCAAAGCTCTGATCTTTCGCTGTGGTTCCTGGAAGCAAATGATGTTTTTTGGGTCTTGCCAGCGATCAACCATTGCTATTTTATCTTTCATCTTTTCTTGATTGCCTTCCTAGAGAGACAGAACAAGTAATTTGGCTCTTTTTCCAAGTATTGAATCTGGTTTGCTCTCTGCAGTGACCTTGAAGTCGATTATGAGTCAGAGAAGAAGGCTTCAATTGTGTACAAGGCTTTAGTAGTCGATAAAGAGGTGCTTCTCCATGATATCAATCTTCACATTGTGCCTCCGTATAGTTAACTTGTTTCTGATTCCATTTCTGTGCTAACTACAGTTGCAGCCAGACAAGGTGAAAAGGGAGATGACAGTTTCTGATGGAAAACTTTCTATGTGAGCCTCTTTTTCTCTTCGAATCCCTGGTTCTTAATGTACGATTAACAGTAGATAGATACCAAAATAGCTTAATGCAGGATTCTTTTGAGCATTAGTAAGGCTGCTGCGTTCATATTTCTCTGCAATCATGTTTTGGCATTCCCATTAGCTGCTCATTTTTTTTCTCGTAGACACCTTGAGGCAGTGGAAGCAAGATTTCTGCGAGCATCATTCAGTGCTTTTGTAGACGTGCTTACTCTTGCCACAAAAACAATCGAAGATTTCGGACAAGGAGTGGATTTCTGATAGCCTTACATGCCCCTGGCCCTCATATTTCAACTGTCACTTTATGCTTAAAATAGCTATCATTTTAATTTACTACCTATCTGTAATTTTATCACAATATGATTTGTAGTGGTTTGATCGAGTGTGAAGGTACTCATTCCAACATTGAGATCTAA ATGCATTTATTAGTTATTACCTATTTTACCACATAATTTTTAAAACTCTTAACAAATGGGTTGGAATTATTAACCGCTAAGACTGTTCCCACGACGCCGACCGTGCCCAGTCCGCGAAGTTGATGCGTGGGCCGCACAATGTGAATATCACCGCTTAACCAGGTTATTTGGGGGGAAAATCCGGCGCTTTTCAACCAGAATTGAAGCTATGGCTCCGACACCTTCCCTCGCTTCTCATGGAGACCCCAAGTGGGAATTCAGCTGTGACCTTGAAGTCGATTATGAGTCAGAGAAGAAGGCTTCAATTGTGTACAAGGCTTTAGTAGTCGATAAAGAGTTGCAGCCAGACAAGGTGAAAAGGGAGATGACAGTTTCTGATGGAAAACTTTCTATACACCTTGAGGCAGTGGAAGCAAGATTTCTGCGAGCATCATTCAGTGCTTTTGTAGACGTGCTTACTCTTGCCACAAAAACAATCGAAGATTTCGGACAAGGAGTGGATTTCTGATAGCCTTACATGCCCCTGGCCCTCATATTTCAACTGTCACTTTATGCTTAAAATAGCTATCATTTTAATTTACTACCTATCTGTAATTTTATCACAATATGATTTGTAGTGGTTTGATCGAGTGTGAAGGTACTCATTCCAACATTGAGATCTAA ATGGCTCCGACACCTTCCCTCGCTTCTCATGGAGACCCCAAGTGGGAATTCAGCTGTGACCTTGAAGTCGATTATGAGTCAGAGAAGAAGGCTTCAATTGTGTACAAGGCTTTAGTAGTCGATAAAGAGTTGCAGCCAGACAAGGTGAAAAGGGAGATGACAGTTTCTGATGGAAAACTTTCTATACACCTTGAGGCAGTGGAAGCAAGATTTCTGCGAGCATCATTCAGTGCTTTTGTAGACGTGCTTACTCTTGCCACAAAAACAATCGAAGATTTCGGACAAGGAGTGGATTTCTGA MAPTPSLASHGDPKWEFSCDLEVDYESEKKASIVYKALVVDKELQPDKVKREMTVSDGKLSIHLEAVEARFLRASFSAFVDVLTLATKTIEDFGQGVDF
BLAST of Carg15058 vs. NCBI nr
Match: XP_023553191.1 (uncharacterized protein LOC111810678 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 183.3 bits (464), Expect = 3.9e-43 Identity = 92/99 (92.93%), Postives = 94/99 (94.95%), Query Frame = 0
BLAST of Carg15058 vs. NCBI nr
Match: XP_004146228.1 (PREDICTED: uncharacterized protein LOC101217139 [Cucumis sativus]) HSP 1 Score: 174.1 bits (440), Expect = 2.4e-40 Identity = 88/99 (88.89%), Postives = 91/99 (91.92%), Query Frame = 0
BLAST of Carg15058 vs. NCBI nr
Match: KGN57658.1 (hypothetical protein Csa_3G238730 [Cucumis sativus]) HSP 1 Score: 174.1 bits (440), Expect = 2.4e-40 Identity = 88/99 (88.89%), Postives = 91/99 (91.92%), Query Frame = 0
BLAST of Carg15058 vs. NCBI nr
Match: XP_022141079.1 (uncharacterized protein LOC111011564 [Momordica charantia]) HSP 1 Score: 170.2 bits (430), Expect = 3.4e-39 Identity = 85/98 (86.73%), Postives = 89/98 (90.82%), Query Frame = 0
BLAST of Carg15058 vs. NCBI nr
Match: XP_022945934.1 (uncharacterized protein LOC111450028 [Cucurbita moschata] >XP_023541072.1 uncharacterized protein LOC111801345 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 169.5 bits (428), Expect = 5.8e-39 Identity = 85/99 (85.86%), Postives = 90/99 (90.91%), Query Frame = 0
BLAST of Carg15058 vs. TAIR10
Match: AT5G53045.1 (unknown protein) HSP 1 Score: 125.6 bits (314), Expect = 1.8e-29 Identity = 61/95 (64.21%), Postives = 76/95 (80.00%), Query Frame = 0
BLAST of Carg15058 vs. TrEMBL
Match: tr|A0A0A0L7A2|A0A0A0L7A2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G238730 PE=4 SV=1) HSP 1 Score: 174.1 bits (440), Expect = 1.6e-40 Identity = 88/99 (88.89%), Postives = 91/99 (91.92%), Query Frame = 0
BLAST of Carg15058 vs. TrEMBL
Match: tr|A0A1S3CTG0|A0A1S3CTG0_CUCME (uncharacterized protein LOC103504146 OS=Cucumis melo OX=3656 GN=LOC103504146 PE=4 SV=1) HSP 1 Score: 162.5 bits (410), Expect = 4.7e-37 Identity = 81/99 (81.82%), Postives = 89/99 (89.90%), Query Frame = 0
BLAST of Carg15058 vs. TrEMBL
Match: tr|M5X2X8|M5X2X8_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_2G312900 PE=4 SV=1) HSP 1 Score: 149.1 bits (375), Expect = 5.4e-33 Identity = 74/98 (75.51%), Postives = 86/98 (87.76%), Query Frame = 0
BLAST of Carg15058 vs. TrEMBL
Match: tr|A0A1R3IZB8|A0A1R3IZB8_COCAP (EKC/KEOPS complex, subunit Pcc1 OS=Corchorus capsularis OX=210143 GN=CCACVL1_08655 PE=4 SV=1) HSP 1 Score: 148.3 bits (373), Expect = 9.2e-33 Identity = 73/94 (77.66%), Postives = 83/94 (88.30%), Query Frame = 0
BLAST of Carg15058 vs. TrEMBL
Match: tr|A0A1R3JFI5|A0A1R3JFI5_9ROSI (EKC/KEOPS complex, subunit Pcc1 OS=Corchorus olitorius OX=93759 GN=COLO4_16787 PE=4 SV=1) HSP 1 Score: 145.6 bits (366), Expect = 6.0e-32 Identity = 72/90 (80.00%), Postives = 80/90 (88.89%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: |