Cp4.1LG09g00250 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CGCCGTGCCGCCTGTTATGTTAGGTTTAGCGAAGAATTTGACGTTTTTCCGCTAAAATTGAAGCAATGGCTCCGACAGCTTCCGTCGTTTCTGATGGAGATGCTAAATGGGAATTCAGCTGGTTCCTCTCTCTCTCTCTCTCTATCTCTCTCTCTCTCTAAGCCCATAAATGCATAGATACAAGTTTTCCTTTAGATCAGTTTGTTTATTATCGTTGCTATGTTAGCATTCTGGTGAGCTTCGCGTCTTTAGTTTAATCTTATTTCTCATTTGATTAATCCGTTTTGTTTTTTTCTCTGGTTCCTTGCAATTTCCATATTCAAAATAAGACAATGATAATGGCAACCCATTTTTCTTTTGTTGCTGAACCCGAAGTTTTGCGAGTAAAATAGTGTCATGAAAGCTCAAATATGCAAAGGTTTCTTCTTTTGCTATGGTTCCTAGAACCCAATGTTGTTTCCTTTCTGGGTGTTGTTAGTGTTTAACAATTGCTATTTGTTCCTAAGTGGTCATTGCGCTTGCTTCTTTCTTTAAATGGTCAACATTTATGTTGGAAACATGCAGTTTAACTCATTGTTTGCTATCTGCAGTGACTTCGAAGTGGACTGTGAATCTGAGAAGAAAGCTTCAATTGTCTATAATGCTTTAGTCGTCGATAAAGAGGTGCTTCTCGATTATTTCAACCTTCGCATTGTGCTCCCTAGTGGACTTGTTTCTGATTTGATTTCTGTGCTAAGTACAGTTGCAGCCAGACAAGGTGAAAAGGGAGATGACAGTTTCTGATGGAAAACTTTCAGTGTGAGCCTATTATGCTCTTGGCATTCCTCATTAATAATACATGGATACCAAAATAGCTTAATACAGAATTCTTGGGAACATTCACAATTCTCCGCAATCATTTTTTAGAATTCTCATTAGCTGTCTGACTTGTTTCATGCAGACACTTCGAGGCAGTGGAAGCAAGATTTCTGCGTGCATCATATAGTGCTTTTCTGGATGTGCTTACTCTTGCCATAAAAACAATCGAAGATTTCGGACAAGGATTGGATTTCTGATTGCCTTCGCTCATCTTTTACATCTCATGTTTGCTTAGTTTACATCTGATCTCCAATTTTGTTACAATATGATTTGTAGTGGTTTGATCCATGGTGAAGAACCACATCCTACATCCATCATTCGAACATTGAGATCCAACAATATAACATTTTCAATACCATATTACTCATTACATAATATATTATTTCTTTTGAAT CGCCGTGCCGCCTGTTATGTTAGGTTTAGCGAAGAATTTGACGTTTTTCCGCTAAAATTGAAGCAATGGCTCCGACAGCTTCCGTCGTTTCTGATGGAGATGCTAAATGGGAATTCAGCTGTGACTTCGAAGTGGACTGTGAATCTGAGAAGAAAGCTTCAATTGTCTATAATGCTTTAGTCGTCGATAAAGAGTTGCAGCCAGACAAGGTGAAAAGGGAGATGACAGTTTCTGATGGAAAACTTTCAGTACACTTCGAGGCAGTGGAAGCAAGATTTCTGCGTGCATCATATAGTGCTTTTCTGGATGTGCTTACTCTTGCCATAAAAACAATCGAAGATTTCGGACAAGGATTGGATTTCTGATTGCCTTCGCTCATCTTTTACATCTCATGTTTGCTTAGTTTACATCTGATCTCCAATTTTGTTACAATATGATTTGTAGTGGTTTGATCCATGGTGAAGAACCACATCCTACATCCATCATTCGAACATTGAGATCCAACAATATAACATTTTCAATACCATATTACTCATTACATAATATATTATTTCTTTTGAAT ATGGCTCCGACAGCTTCCGTCGTTTCTGATGGAGATGCTAAATGGGAATTCAGCTGTGACTTCGAAGTGGACTGTGAATCTGAGAAGAAAGCTTCAATTGTCTATAATGCTTTAGTCGTCGATAAAGAGTTGCAGCCAGACAAGGTGAAAAGGGAGATGACAGTTTCTGATGGAAAACTTTCAGTACACTTCGAGGCAGTGGAAGCAAGATTTCTGCGTGCATCATATAGTGCTTTTCTGGATGTGCTTACTCTTGCCATAAAAACAATCGAAGATTTCGGACAAGGATTGGATTTCTGA MAPTASVVSDGDAKWEFSCDFEVDCESEKKASIVYNALVVDKELQPDKVKREMTVSDGKLSVHFEAVEARFLRASYSAFLDVLTLAIKTIEDFGQGLDF
BLAST of Cp4.1LG09g00250 vs. TrEMBL
Match: A0A0A0L7A2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G238730 PE=4 SV=1) HSP 1 Score: 163.3 bits (412), Expect = 1.5e-37 Identity = 83/99 (83.84%), Postives = 88/99 (88.89%), Query Frame = 1
BLAST of Cp4.1LG09g00250 vs. TrEMBL
Match: M5X2X8_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013862mg PE=4 SV=1) HSP 1 Score: 150.2 bits (378), Expect = 1.3e-33 Identity = 75/98 (76.53%), Postives = 86/98 (87.76%), Query Frame = 1
BLAST of Cp4.1LG09g00250 vs. TrEMBL
Match: A0A061G2H6_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_015432 PE=4 SV=1) HSP 1 Score: 140.2 bits (352), Expect = 1.4e-30 Identity = 70/93 (75.27%), Postives = 81/93 (87.10%), Query Frame = 1
BLAST of Cp4.1LG09g00250 vs. TrEMBL
Match: W9SR14_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_011869 PE=4 SV=1) HSP 1 Score: 139.4 bits (350), Expect = 2.3e-30 Identity = 72/93 (77.42%), Postives = 82/93 (88.17%), Query Frame = 1
BLAST of Cp4.1LG09g00250 vs. TrEMBL
Match: B9I1X5_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0012s02410g PE=4 SV=2) HSP 1 Score: 138.7 bits (348), Expect = 4.0e-30 Identity = 70/96 (72.92%), Postives = 82/96 (85.42%), Query Frame = 1
BLAST of Cp4.1LG09g00250 vs. TAIR10
Match: AT5G53045.1 (AT5G53045.1 unknown protein) HSP 1 Score: 120.9 bits (302), Expect = 4.3e-28 Identity = 59/95 (62.11%), Postives = 74/95 (77.89%), Query Frame = 1
BLAST of Cp4.1LG09g00250 vs. NCBI nr
Match: gi|659133652|ref|XP_008466840.1| (PREDICTED: uncharacterized protein LOC103504146 [Cucumis melo]) HSP 1 Score: 166.4 bits (420), Expect = 2.5e-38 Identity = 81/99 (81.82%), Postives = 92/99 (92.93%), Query Frame = 1
BLAST of Cp4.1LG09g00250 vs. NCBI nr
Match: gi|449456983|ref|XP_004146228.1| (PREDICTED: uncharacterized protein LOC101217139 [Cucumis sativus]) HSP 1 Score: 163.3 bits (412), Expect = 2.2e-37 Identity = 83/99 (83.84%), Postives = 88/99 (88.89%), Query Frame = 1
BLAST of Cp4.1LG09g00250 vs. NCBI nr
Match: gi|700202525|gb|KGN57658.1| (hypothetical protein Csa_3G238730 [Cucumis sativus]) HSP 1 Score: 163.3 bits (412), Expect = 2.2e-37 Identity = 83/99 (83.84%), Postives = 88/99 (88.89%), Query Frame = 1
BLAST of Cp4.1LG09g00250 vs. NCBI nr
Match: gi|470144659|ref|XP_004307966.1| (PREDICTED: uncharacterized protein LOC101306760 [Fragaria vesca subsp. vesca]) HSP 1 Score: 150.2 bits (378), Expect = 1.9e-33 Identity = 75/98 (76.53%), Postives = 86/98 (87.76%), Query Frame = 1
BLAST of Cp4.1LG09g00250 vs. NCBI nr
Match: gi|596012112|ref|XP_007218647.1| (hypothetical protein PRUPE_ppa013862mg [Prunus persica]) HSP 1 Score: 150.2 bits (378), Expect = 1.9e-33 Identity = 75/98 (76.53%), Postives = 86/98 (87.76%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: |