CmaCh18G013240 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GTTTTGTTAGGTTTAGCGAAGAATTTGACGTTTTTCCGCTAAAATTGAAGCAATGGCTCCGACAGCTTCCGTCGTTTCTGATGGAGATGCTAAATGGGAATTCAGCTGGTTCTTCTCTCTCTCTCTCTCTCTCTCTAAGCCCATAAATGCATAGTTACAAGTTTTCCTTCGATAGTATGGCATGCTTTCAGATCAGTTTGTTTATTATCGTTGCTACGTTAGCATTTTGGTGAGCTTCGCGTCTTTAGTTTAATCTTATTTCTCATTTGATTAATCCGTTTTGTTTTTTTCTCTGGTTCCTTGCAATTTCCATATTCAAAATAAGACAATGATAATGATGATGATGATCATGTTCTTGCGCCTGGCAAGTGGCAACCCATTTTTCTTTTGTTGCTGAACCCGAAGTTTTGCGAGTAAAATAGTGTCATGAAAGCTCAAATATGCAACGGTTTCTTCTTTTGCTATGGTTCCTAGAACCCAATGTTGTTTCCTTTCTGGTCTTTAACAATTGCTATTTGTTCCTAAATGGTCATTGCGCTTGCTTCTTTCTTTAAATGGTCAACATTTGTGTTGGAAACTTGCAGTTTAACTCATTGTTTGCTATCTGCAGTGACTTCGAAGTGGACTGTGAATCTGAGAAGAAAGCTTCAATTGTCTATAATGCTTTAGTCGTCGATAAAGAGGTGCTTCTCGATTATTTCAACCTTCGCATTGTGCTCCCTAGTGGACTTGTTTCTGATTTGATTTCTGTGCCAATTACAGTTGCAGCCAGACAAGGTGAAAAGGGGGATGACAGTTTCTGATGGAAAACTTTCAGTGTGAGCCTATTATGCTCTTGGCATTCCTCATTAATAATACATGGATACCAAAATAGCTTAATACAGAATTCTTGGGAACATTCACAATTCTCTGCAATCATTTTTTAGAATTTTCATTAGCTGTCTGATTTGTTTCATGCAGACACTTCGAGGCAGTGGAAGCAAGATTTCTGCGTGCATCATGTAGTGCTTTTCTGGACGTTCTTACTCTTGCCATAAAAACAATCGAAGATTTCGGACAAGGATTGGATTTCTGATAGCCTTCGCTCATCTTTTACATCTCATGTTTGCTTAGTTTACAATATGATGATTTGTAGTGGTTTGATCCATGGCGAAGAACCATATCCTACATCCATCATTATAACATTCCAACATTGACATCCAACAATATAACATTTTCAATAACATATTACTCCTTATATTTAGCCAC GTTTTGTTAGGTTTAGCGAAGAATTTGACGTTTTTCCGCTAAAATTGAAGCAATGGCTCCGACAGCTTCCGTCGTTTCTGATGGAGATGCTAAATGGGAATTCAGCTGTGACTTCGAAGTGGACTGTGAATCTGAGAAGAAAGCTTCAATTGTCTATAATGCTTTAGTCGTCGATAAAGAGTTGCAGCCAGACAAGGTGAAAAGGGGGATGACAGTTTCTGATGGAAAACTTTCAGTACACTTCGAGGCAGTGGAAGCAAGATTTCTGCGTGCATCATGTAGTGCTTTTCTGGACGTTCTTACTCTTGCCATAAAAACAATCGAAGATTTCGGACAAGGATTGGATTTCTGATAGCCTTCGCTCATCTTTTACATCTCATGTTTGCTTAGTTTACAATATGATGATTTGTAGTGGTTTGATCCATGGCGAAGAACCATATCCTACATCCATCATTATAACATTCCAACATTGACATCCAACAATATAACATTTTCAATAACATATTACTCCTTATATTTAGCCAC ATGGCTCCGACAGCTTCCGTCGTTTCTGATGGAGATGCTAAATGGGAATTCAGCTGTGACTTCGAAGTGGACTGTGAATCTGAGAAGAAAGCTTCAATTGTCTATAATGCTTTAGTCGTCGATAAAGAGTTGCAGCCAGACAAGGTGAAAAGGGGGATGACAGTTTCTGATGGAAAACTTTCAGTACACTTCGAGGCAGTGGAAGCAAGATTTCTGCGTGCATCATGTAGTGCTTTTCTGGACGTTCTTACTCTTGCCATAAAAACAATCGAAGATTTCGGACAAGGATTGGATTTCTGA MAPTASVVSDGDAKWEFSCDFEVDCESEKKASIVYNALVVDKELQPDKVKRGMTVSDGKLSVHFEAVEARFLRASCSAFLDVLTLAIKTIEDFGQGLDF
BLAST of CmaCh18G013240 vs. TrEMBL
Match: A0A0A0L7A2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G238730 PE=4 SV=1) HSP 1 Score: 162.9 bits (411), Expect = 2.0e-37 Identity = 83/99 (83.84%), Postives = 87/99 (87.88%), Query Frame = 1
BLAST of CmaCh18G013240 vs. TrEMBL
Match: M5X2X8_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013862mg PE=4 SV=1) HSP 1 Score: 146.0 bits (367), Expect = 2.5e-32 Identity = 74/98 (75.51%), Postives = 84/98 (85.71%), Query Frame = 1
BLAST of CmaCh18G013240 vs. TrEMBL
Match: A0A061G2H6_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_015432 PE=4 SV=1) HSP 1 Score: 137.9 bits (346), Expect = 6.7e-30 Identity = 70/93 (75.27%), Postives = 79/93 (84.95%), Query Frame = 1
BLAST of CmaCh18G013240 vs. TrEMBL
Match: B9I1X5_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0012s02410g PE=4 SV=2) HSP 1 Score: 137.5 bits (345), Expect = 8.8e-30 Identity = 70/96 (72.92%), Postives = 81/96 (84.38%), Query Frame = 1
BLAST of CmaCh18G013240 vs. TrEMBL
Match: V7CVI7_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_001G057400g PE=4 SV=1) HSP 1 Score: 136.3 bits (342), Expect = 2.0e-29 Identity = 69/91 (75.82%), Postives = 75/91 (82.42%), Query Frame = 1
BLAST of CmaCh18G013240 vs. TAIR10
Match: AT5G53045.1 (AT5G53045.1 unknown protein) HSP 1 Score: 119.8 bits (299), Expect = 9.6e-28 Identity = 59/95 (62.11%), Postives = 73/95 (76.84%), Query Frame = 1
BLAST of CmaCh18G013240 vs. NCBI nr
Match: gi|659133652|ref|XP_008466840.1| (PREDICTED: uncharacterized protein LOC103504146 [Cucumis melo]) HSP 1 Score: 166.0 bits (419), Expect = 3.3e-38 Identity = 81/99 (81.82%), Postives = 91/99 (91.92%), Query Frame = 1
BLAST of CmaCh18G013240 vs. NCBI nr
Match: gi|449456983|ref|XP_004146228.1| (PREDICTED: uncharacterized protein LOC101217139 [Cucumis sativus]) HSP 1 Score: 162.9 bits (411), Expect = 2.8e-37 Identity = 83/99 (83.84%), Postives = 87/99 (87.88%), Query Frame = 1
BLAST of CmaCh18G013240 vs. NCBI nr
Match: gi|700202525|gb|KGN57658.1| (hypothetical protein Csa_3G238730 [Cucumis sativus]) HSP 1 Score: 162.9 bits (411), Expect = 2.8e-37 Identity = 83/99 (83.84%), Postives = 87/99 (87.88%), Query Frame = 1
BLAST of CmaCh18G013240 vs. NCBI nr
Match: gi|470144659|ref|XP_004307966.1| (PREDICTED: uncharacterized protein LOC101306760 [Fragaria vesca subsp. vesca]) HSP 1 Score: 146.0 bits (367), Expect = 3.6e-32 Identity = 74/98 (75.51%), Postives = 84/98 (85.71%), Query Frame = 1
BLAST of CmaCh18G013240 vs. NCBI nr
Match: gi|596012112|ref|XP_007218647.1| (hypothetical protein PRUPE_ppa013862mg [Prunus persica]) HSP 1 Score: 146.0 bits (367), Expect = 3.6e-32 Identity = 74/98 (75.51%), Postives = 84/98 (85.71%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |